organic compounds
3,5-Bis(4-chlorobenzylidene)-1-methylpiperidin-4-one
aDepartment of Natural Sciences, New Mexico Highlands University, Las Vegas, NM 87701, USA, bSSS Optical Technologies, LLC, 515 Sparkman Drive, Suite 122, Huntsville, AL 35816, USA, cDepartment of Biological Sciences, University of North Texas, Denton, TX 76203, USA, and dDepartment of Chemistry, University of North Texas, Denton, TX 76203, USA
*Correspondence e-mail: vladimir.nesterov@unt.edu, shulaev@unt.edu
In the title molecule, C20H17Cl2NO, the central heterocyclic ring adopts a flattened boat conformation. The dihedral angles between the planar part of this central heterocyclic ring [maximum deviation = 0.004 (1) Å] and the two almost planar side-chain fragments [maximum deviations = 0.015 (1) and 0.019 (1) Å], that include the aromatic ring and bridging atoms, are 18.1 (1) and 18.0 (1)°. In the crystal, pairs of weak intermolecular C—H⋯O hydrogen bonds link molecules into inversion dimers that form stacks along the a axis. The structure is further stabilized by weak intermolecular C—H⋯π interactions involving the benzene rings.
Related literature
For non-linear optical organic compounds with two-photon absorption properties and potential biophotonic materials, see: Nesterov et al. (2003); Nesterov (2004); Sarkisov et al. (2005). For the biological importance of 4-piperidone, see: Jia et al. (1988, 1989); Dimmock et al. (2001). For the synthesis of the title compound, see: Dimmock et al. (2001). For related structures, see: Nesterov (2004); Nesterov et al. (2003, 2007a,b,c, 2008). For weak hydrogen bonds, see: Desiraju & Steiner (1999). For the van der Waals radius of the H atom, see: Rowland & Taylor (1996).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811006994/su2255sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811006994/su2255Isup2.hkl
The title compound was obtained according to the literature procedure (Dimmock et al., 2001) by the reaction of p-chlorobenzaldehyde with 1-methyl-4-piperidone. The precipitate obtained was isolated and recrystallized from ethanol/acetonitrile [v/v = 50/50]; Mp. 442 K, yield 87%). The title compound was characterized by 1H and 13C NMR spectroscopy.
All C-bound H atoms were placed in idealized positions and allowed to ride on their parent atom: C—H = 0.95, 0.98 and 0.99 Å for CH, CH3 and CH2 H-atoms, respectively, with Uiso(H) = k × Ueq(C), where k = 1.5 for CH3 H-atoms, and k = 1.2 for all other H-atoms.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C20H17Cl2NO | F(000) = 744 |
Mr = 358.25 | Dx = 1.406 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2327 reflections |
a = 5.4568 (11) Å | θ = 2.4–25.2° |
b = 13.916 (3) Å | µ = 0.39 mm−1 |
c = 22.289 (4) Å | T = 100 K |
β = 90.847 (3)° | Plate, yellow |
V = 1692.4 (6) Å3 | 0.23 × 0.18 × 0.08 mm |
Z = 4 |
Bruker SMART APEX II CCD diffractometer | 3461 independent reflections |
Radiation source: fine-focus sealed tube | 2830 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
ω scans | θmax = 26.4°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −6→6 |
Tmin = 0.916, Tmax = 0.970 | k = −17→17 |
14890 measured reflections | l = −27→27 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.080 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.030P)2 + 0.850P] where P = (Fo2 + 2Fc2)/3 |
3461 reflections | (Δ/σ)max = 0.001 |
218 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C20H17Cl2NO | V = 1692.4 (6) Å3 |
Mr = 358.25 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 5.4568 (11) Å | µ = 0.39 mm−1 |
b = 13.916 (3) Å | T = 100 K |
c = 22.289 (4) Å | 0.23 × 0.18 × 0.08 mm |
β = 90.847 (3)° |
Bruker SMART APEX II CCD diffractometer | 3461 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2830 reflections with I > 2σ(I) |
Tmin = 0.916, Tmax = 0.970 | Rint = 0.042 |
14890 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.080 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.27 e Å−3 |
3461 reflections | Δρmin = −0.28 e Å−3 |
218 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.64148 (8) | 0.85150 (3) | 0.742372 (19) | 0.02375 (12) | |
Cl2 | 0.64623 (9) | 0.87411 (3) | 0.01133 (2) | 0.02727 (13) | |
O1 | 0.1157 (2) | 0.92396 (9) | 0.37523 (5) | 0.0245 (3) | |
N1 | 0.5768 (3) | 0.71047 (10) | 0.37453 (6) | 0.0191 (3) | |
C1 | 0.7423 (4) | 0.62787 (13) | 0.37437 (8) | 0.0245 (4) | |
H1A | 0.7070 | 0.5863 | 0.4087 | 0.037* | |
H1B | 0.9123 | 0.6503 | 0.3773 | 0.037* | |
H1C | 0.7187 | 0.5916 | 0.3370 | 0.037* | |
C2 | 0.6145 (3) | 0.76651 (12) | 0.42936 (8) | 0.0187 (4) | |
H2A | 0.7803 | 0.7953 | 0.4295 | 0.022* | |
H2B | 0.6023 | 0.7239 | 0.4648 | 0.022* | |
C3 | 0.4243 (3) | 0.84484 (12) | 0.43294 (8) | 0.0172 (4) | |
C4 | 0.3040 (3) | 0.87585 (12) | 0.37573 (8) | 0.0188 (4) | |
C5 | 0.4283 (3) | 0.84936 (12) | 0.31884 (8) | 0.0170 (4) | |
C6 | 0.6202 (3) | 0.77144 (12) | 0.32221 (8) | 0.0183 (4) | |
H6A | 0.6132 | 0.7321 | 0.2852 | 0.022* | |
H6B | 0.7852 | 0.8007 | 0.3255 | 0.022* | |
C7 | 0.3539 (3) | 0.89000 (12) | 0.48316 (8) | 0.0181 (4) | |
H7A | 0.2281 | 0.9364 | 0.4772 | 0.022* | |
C8 | 0.4384 (3) | 0.87971 (12) | 0.54539 (8) | 0.0176 (4) | |
C9 | 0.2897 (3) | 0.91907 (12) | 0.59029 (8) | 0.0190 (4) | |
H9A | 0.1438 | 0.9519 | 0.5788 | 0.023* | |
C10 | 0.3496 (3) | 0.91133 (13) | 0.65039 (8) | 0.0201 (4) | |
H10A | 0.2454 | 0.9374 | 0.6800 | 0.024* | |
C11 | 0.5648 (3) | 0.86468 (12) | 0.66671 (8) | 0.0187 (4) | |
C12 | 0.7215 (3) | 0.82827 (12) | 0.62392 (8) | 0.0194 (4) | |
H12A | 0.8710 | 0.7983 | 0.6358 | 0.023* | |
C13 | 0.6586 (3) | 0.83584 (12) | 0.56397 (8) | 0.0191 (4) | |
H13A | 0.7662 | 0.8109 | 0.5347 | 0.023* | |
C14 | 0.3592 (3) | 0.89801 (12) | 0.26932 (8) | 0.0176 (4) | |
H14A | 0.2328 | 0.9438 | 0.2755 | 0.021* | |
C15 | 0.4450 (3) | 0.89257 (12) | 0.20763 (8) | 0.0174 (4) | |
C16 | 0.2956 (3) | 0.93346 (13) | 0.16272 (8) | 0.0204 (4) | |
H16A | 0.1495 | 0.9655 | 0.1739 | 0.024* | |
C17 | 0.3543 (3) | 0.92871 (13) | 0.10259 (8) | 0.0206 (4) | |
H17A | 0.2491 | 0.9560 | 0.0728 | 0.025* | |
C18 | 0.5693 (3) | 0.88342 (12) | 0.08676 (8) | 0.0192 (4) | |
C19 | 0.7270 (3) | 0.84500 (12) | 0.12966 (8) | 0.0199 (4) | |
H19A | 0.8760 | 0.8155 | 0.1181 | 0.024* | |
C20 | 0.6655 (3) | 0.84995 (12) | 0.18978 (8) | 0.0191 (4) | |
H20A | 0.7742 | 0.8241 | 0.2193 | 0.023* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0283 (3) | 0.0252 (2) | 0.0177 (2) | 0.00033 (19) | 0.00000 (17) | −0.00001 (17) |
Cl2 | 0.0321 (3) | 0.0321 (3) | 0.0177 (2) | 0.0028 (2) | 0.00405 (18) | 0.00208 (18) |
O1 | 0.0208 (7) | 0.0300 (7) | 0.0229 (7) | 0.0082 (6) | 0.0024 (5) | 0.0004 (6) |
N1 | 0.0227 (8) | 0.0170 (7) | 0.0175 (7) | 0.0018 (6) | 0.0019 (6) | 0.0001 (6) |
C1 | 0.0325 (11) | 0.0186 (9) | 0.0226 (10) | 0.0051 (8) | 0.0020 (8) | 0.0000 (7) |
C2 | 0.0185 (9) | 0.0194 (9) | 0.0181 (9) | 0.0016 (7) | 0.0020 (7) | 0.0010 (7) |
C3 | 0.0154 (8) | 0.0177 (9) | 0.0187 (9) | −0.0027 (7) | 0.0025 (7) | 0.0016 (7) |
C4 | 0.0177 (9) | 0.0164 (9) | 0.0224 (9) | −0.0014 (7) | 0.0021 (7) | −0.0005 (7) |
C5 | 0.0151 (8) | 0.0172 (8) | 0.0187 (9) | −0.0016 (7) | −0.0007 (7) | −0.0023 (7) |
C6 | 0.0180 (9) | 0.0196 (9) | 0.0173 (9) | 0.0020 (7) | 0.0017 (7) | −0.0005 (7) |
C7 | 0.0161 (8) | 0.0173 (8) | 0.0209 (9) | 0.0005 (7) | 0.0016 (7) | 0.0022 (7) |
C8 | 0.0190 (9) | 0.0154 (8) | 0.0186 (9) | −0.0025 (7) | 0.0028 (7) | 0.0002 (7) |
C9 | 0.0158 (9) | 0.0175 (9) | 0.0237 (9) | 0.0014 (7) | 0.0015 (7) | −0.0002 (7) |
C10 | 0.0198 (9) | 0.0211 (9) | 0.0197 (9) | −0.0013 (7) | 0.0049 (7) | −0.0030 (7) |
C11 | 0.0214 (9) | 0.0175 (9) | 0.0172 (9) | −0.0038 (7) | 0.0008 (7) | −0.0005 (7) |
C12 | 0.0161 (9) | 0.0191 (9) | 0.0229 (9) | 0.0004 (7) | −0.0001 (7) | 0.0009 (7) |
C13 | 0.0185 (9) | 0.0198 (9) | 0.0193 (9) | 0.0005 (7) | 0.0056 (7) | −0.0025 (7) |
C14 | 0.0153 (8) | 0.0160 (8) | 0.0215 (9) | −0.0001 (7) | 0.0001 (7) | −0.0021 (7) |
C15 | 0.0181 (9) | 0.0154 (8) | 0.0188 (9) | −0.0028 (7) | 0.0007 (7) | −0.0010 (7) |
C16 | 0.0189 (9) | 0.0195 (9) | 0.0229 (9) | 0.0014 (7) | 0.0011 (7) | 0.0008 (7) |
C17 | 0.0204 (9) | 0.0213 (9) | 0.0199 (9) | −0.0006 (7) | −0.0033 (7) | 0.0035 (7) |
C18 | 0.0229 (9) | 0.0173 (9) | 0.0176 (9) | −0.0046 (7) | 0.0027 (7) | 0.0009 (7) |
C19 | 0.0175 (9) | 0.0192 (9) | 0.0230 (9) | −0.0017 (7) | 0.0019 (7) | −0.0004 (7) |
C20 | 0.0177 (9) | 0.0193 (9) | 0.0202 (9) | −0.0005 (7) | −0.0015 (7) | 0.0013 (7) |
Cl1—C11 | 1.7412 (18) | C8—C9 | 1.408 (2) |
Cl2—C18 | 1.7437 (18) | C9—C10 | 1.378 (2) |
O1—C4 | 1.226 (2) | C9—H9A | 0.9500 |
N1—C2 | 1.462 (2) | C10—C11 | 1.386 (2) |
N1—C1 | 1.462 (2) | C10—H10A | 0.9500 |
N1—C6 | 1.464 (2) | C11—C12 | 1.386 (2) |
C1—H1A | 0.9800 | C12—C13 | 1.379 (2) |
C1—H1B | 0.9800 | C12—H12A | 0.9500 |
C1—H1C | 0.9800 | C13—H13A | 0.9500 |
C2—C3 | 1.508 (2) | C14—C15 | 1.461 (2) |
C2—H2A | 0.9900 | C14—H14A | 0.9500 |
C2—H2B | 0.9900 | C15—C16 | 1.402 (2) |
C3—C7 | 1.345 (2) | C15—C20 | 1.404 (2) |
C3—C4 | 1.489 (2) | C16—C17 | 1.384 (2) |
C4—C5 | 1.493 (2) | C16—H16A | 0.9500 |
C5—C14 | 1.344 (2) | C17—C18 | 1.382 (2) |
C5—C6 | 1.509 (2) | C17—H17A | 0.9500 |
C6—H6A | 0.9900 | C18—C19 | 1.385 (2) |
C6—H6B | 0.9900 | C19—C20 | 1.388 (2) |
C7—C8 | 1.462 (2) | C19—H19A | 0.9500 |
C7—H7A | 0.9500 | C20—H20A | 0.9500 |
C8—C13 | 1.405 (2) | ||
C2—N1—C1 | 110.01 (14) | C10—C9—C8 | 121.96 (16) |
C2—N1—C6 | 109.53 (14) | C10—C9—H9A | 119.0 |
C1—N1—C6 | 110.27 (13) | C8—C9—H9A | 119.0 |
N1—C1—H1A | 109.5 | C9—C10—C11 | 118.66 (16) |
N1—C1—H1B | 109.5 | C9—C10—H10A | 120.7 |
H1A—C1—H1B | 109.5 | C11—C10—H10A | 120.7 |
N1—C1—H1C | 109.5 | C10—C11—C12 | 121.30 (16) |
H1A—C1—H1C | 109.5 | C10—C11—Cl1 | 119.61 (13) |
H1B—C1—H1C | 109.5 | C12—C11—Cl1 | 119.09 (14) |
N1—C2—C3 | 109.96 (14) | C13—C12—C11 | 119.45 (16) |
N1—C2—H2A | 109.7 | C13—C12—H12A | 120.3 |
C3—C2—H2A | 109.7 | C11—C12—H12A | 120.3 |
N1—C2—H2B | 109.7 | C12—C13—C8 | 121.23 (16) |
C3—C2—H2B | 109.7 | C12—C13—H13A | 119.4 |
H2A—C2—H2B | 108.2 | C8—C13—H13A | 119.4 |
C7—C3—C4 | 116.71 (16) | C5—C14—C15 | 131.05 (16) |
C7—C3—C2 | 125.96 (16) | C5—C14—H14A | 114.5 |
C4—C3—C2 | 117.33 (15) | C15—C14—H14A | 114.5 |
O1—C4—C3 | 121.64 (16) | C16—C15—C20 | 117.43 (16) |
O1—C4—C5 | 121.21 (16) | C16—C15—C14 | 117.37 (15) |
C3—C4—C5 | 117.10 (15) | C20—C15—C14 | 125.19 (16) |
C14—C5—C4 | 116.58 (15) | C17—C16—C15 | 122.11 (17) |
C14—C5—C6 | 126.10 (16) | C17—C16—H16A | 118.9 |
C4—C5—C6 | 117.31 (15) | C15—C16—H16A | 118.9 |
N1—C6—C5 | 109.62 (14) | C18—C17—C16 | 118.58 (16) |
N1—C6—H6A | 109.7 | C18—C17—H17A | 120.7 |
C5—C6—H6A | 109.7 | C16—C17—H17A | 120.7 |
N1—C6—H6B | 109.7 | C17—C18—C19 | 121.41 (16) |
C5—C6—H6B | 109.7 | C17—C18—Cl2 | 119.84 (14) |
H6A—C6—H6B | 108.2 | C19—C18—Cl2 | 118.75 (14) |
C3—C7—C8 | 130.82 (17) | C18—C19—C20 | 119.40 (16) |
C3—C7—H7A | 114.6 | C18—C19—H19A | 120.3 |
C8—C7—H7A | 114.6 | C20—C19—H19A | 120.3 |
C13—C8—C9 | 117.31 (16) | C19—C20—C15 | 120.99 (16) |
C13—C8—C7 | 125.35 (16) | C19—C20—H20A | 119.5 |
C9—C8—C7 | 117.31 (16) | C15—C20—H20A | 119.5 |
Cg1 and Cg2 are the centroids of the C15–C20 and C8–C13 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9A···O1i | 0.95 | 2.47 | 3.210 (2) | 135 |
C12—H12A···Cg1ii | 0.95 | 2.72 | 3.439 (2) | 133 |
C19—H19A···Cg2iii | 0.95 | 2.73 | 3.432 (2) | 131 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) x+1/2, −y+3/2, z+1/2; (iii) x+1/2, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H17Cl2NO |
Mr | 358.25 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 5.4568 (11), 13.916 (3), 22.289 (4) |
β (°) | 90.847 (3) |
V (Å3) | 1692.4 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.39 |
Crystal size (mm) | 0.23 × 0.18 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART APEX II CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.916, 0.970 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14890, 3461, 2830 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.080, 1.03 |
No. of reflections | 3461 |
No. of parameters | 218 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.28 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Cg1 and Cg2 are the centroids of the C15–C20 and C8–C13 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C9—H9A···O1i | 0.95 | 2.47 | 3.210 (2) | 135 |
C12—H12A···Cg1ii | 0.95 | 2.72 | 3.439 (2) | 133 |
C19—H19A···Cg2iii | 0.95 | 2.73 | 3.432 (2) | 131 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) x+1/2, −y+3/2, z+1/2; (iii) x+1/2, −y+3/2, z−1/2. |
Acknowledgements
We appreciate financial support from DoD Grant W911NF-05–1–0456, and in part by the NIH (National Institutes of Health) NCI (National Cancer Institute) grant R01CA120170.
References
Bruker (2001). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Desiraju, G. R. & Steiner, T. (1999). The Weak Hydrogen Bond. Oxford University Press. Google Scholar
Dimmock, J. R., Padmanilayam, M. P., Puthucode, R. N., Nazarali, A. J., Motaganahalli, N. L., Zell, G. A., Quail, J. W., Oloo, E. O., Kraatz, H. B., Prisciak, J. S., Allen, T. M., Santos, C. L., Balzarini, J., De Clercq, E. & Manavathu, E. K. (2001). J. Med. Chem. 44, 586–593. Web of Science CSD CrossRef PubMed CAS Google Scholar
Jia, Z., Quail, J. W., Arora, V. K. & Dimmock, J. R. (1988). Acta Cryst. C44, 2114–2117. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Jia, Z., Quail, J. W., Arora, V. K. & Dimmock, J. R. (1989). Acta Cryst. C45, 285–289. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Nesterov, V. N. (2004). Acta Cryst. C60, o806–o809. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Nesterov, V. N., Sarkisov, S. S., Curley, M. J. & Urbas, A. (2007a). Acta Cryst. E63, o1785–o1787. Web of Science CSD CrossRef IUCr Journals Google Scholar
Nesterov, V. N., Sarkisov, S. S., Curley, M. J. & Urbas, A. (2007b). Acta Cryst. E63, o3043–o3044. Web of Science CSD CrossRef IUCr Journals Google Scholar
Nesterov, V. N., Sarkisov, S. S., Curley, M. J., Urbas, A. & Ruiz, T. (2007c). Acta Cryst. E63, o4784. Web of Science CSD CrossRef IUCr Journals Google Scholar
Nesterov, V. N., Timofeeva, T. V., Sarkisov, S. S., Leyderman, A., Lee, C. Y.-C. & Antipin, M. Yu. (2003). Acta Cryst. C59, o605–o608. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Nesterov, V. N., Zakharov, L. N., Sarkisov, S. S., Curley, M. J. & Urbas, A. (2008). Acta Cryst. C64, o73–o75. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rowland, R. S. & Taylor, R. (1996). J. Phys. Chem. 100, 7384–7391. CrossRef CAS Web of Science Google Scholar
Sarkisov, S. S., Peterson, B. H., Curley, M. J., Nesterov, V. N., Timofeeva, T., Antipin, M., Radovanova, E. I., Leyderman, A. & Fleitz, P. (2005). Two-photon absorption and fluorescence of new derivatives of cyclohexanone and piperidone. Nonlinear Optical Physics and Materials (JNOPM), Vol. 14, pp. 21–40. Singapore: World Scientific Publishing Company. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Continuing our work on the synthesis and structural investigations of nonlinear optical organic compounds with two-photon absorption properties and potential biophotonic materials (Nesterov et al., 2003; Nesterov, 2004; Nesterov et al., 2007a-c; Nesterov et al., 2008; Sarkisov et al., 2005), we investigated the crystal structure of the title compound. This compound belongs to a group that has shown anticancer activity (Jia et al., 1988; Jia et al., 1989; Dimmock et al., 2001). It may also find application as an agent for locating cancer cells with two photon excited fluorescence and as potential agent for a photodynamic treatment of cancer (Nesterov et al., 2003; Sarkisov et al., 2005).
The molecular structure of the title molecule is illustrated in Fig. 1. The central heterocycle adopts a flattened boat conformation: atoms N1 and C4 lie -0.723 (1) and -0.205 (1) Å, respectively, out of the central C4 plane [planar within 0.004 (1) Å]. Dihedral angles between the flat part of the heterocycle (atoms C2,C3,C5,C6) and the two almost planar fragments that include the Ph-ring and the bridging atoms are 18.1 (1) and 18.0 (1)° for (C7-C13) and (C14-C20), respectively. Such nonplanarity might partly be caused by the presence of short intramolecular contacts H2B···H13A and H6A···H20A with distances 2.16 and 2.15 Å, that are somewhat shorter than the doubled van der Waals radii of the H atom (Rowland & Taylor, 1996). Atom N1 in the piperidone ring has a pyramidal coordination with the sum of bond angles equal to 329.8 (1)°, while the methyl substituent connected to it occupies an equatorial position.
In the crystal there are weak intermolecular C—H···O (H9A···O1 2.47 Å) contacts (Table 1) that could be considered as weak hydrogen bonds (Desiraju & Steiner, 1999). Such H-bonds link the molecules into dimers, centered about an inversion center, that form stacks along the a-axis (Fig. 2). The structure of the molecule is further stabilized by weak intermolecular C-H···π-interactions involving the benzene rings (Table 1).