organic compounds
4-{2-[2-(4-Chlorobenzylidene)hydrazinylidene]-3,6-dihydro-2H-1,3,4-thiadiazin-5-yl}-3-phenylsydnone
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
The title compound, C18H13ClN6O2S, exists in trans and cis configurations with respect to the acyclic C=N bonds [C=N = 1.2837 (15) and 1.3000 (14) Å, respectively]. The 3,6-dihydro-2H-1,3,4-thiadiazine ring adopts a half-boat conformation. The sydnone ring is approximately planar [maximum deviation = 0.002 (1) Å] and forms dihedral angles of 50.45 (7) and 61.21 (6)° with the aromatic rings. In the crystal, intermolecular N—H⋯N, C—H⋯Cl and C—H⋯S hydrogen bonds link the molecules into layers parallel to ab plane. The crystal packing is stabilized by C—H⋯π interactions and further consolidated by π–π interactions involving the phenyl rings [centroid–centroid distance = 3.6306 (7) Å].
Related literature
For background to ); Wagner & Hill (1974); Kalluraya & Rahiman (1997); Kalluraya et al. (2003). For related structures, see: Fun et al. (2010); Fun, Loh et al. (2011); Fun, Quah et al. (2011). For ring conformations, see: Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
and their biological activity, see: Newton & Ramsden (1982Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811013912/bq2294sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811013912/bq2294Isup2.hkl
To a solution of 4-bromoacetyl-3-(p-anisyl)sydnone (0.01 mol) and N'-[(4-chlorophenyl)methylidene]thiocarbonohydrazide (0.01 mol) in ethanol, a catalytic amount of anhydrous sodium acetate was added. The solution was stirred at room temperature for 2–3 h. The solid product that separated out was filtered and dried. It was then recrystallized from ethanol. Crystals suitable for X-ray analysis were obtained from 1:2 mixtures of DMF and ethanol by slow evaporation.
H1N3 was located from the difference Fourier map and refined freely [N–H = 0.84 (2) Å]. The remaining H atoms were positioned geometrically and refined using a riding model with Uiso(H) = 1.2 Ueq(C) [C–H = 0.93 or 0.97 Å].
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids and the atom-numbering scheme. | |
Fig. 2. The crystal packing of the title compound, viewed along the b axis. H atoms not involved in the intermolecular interactions (dashed lines) have been omitted for clarity. |
C18H13ClN6O2S | Z = 2 |
Mr = 412.85 | F(000) = 424 |
Triclinic, P1 | Dx = 1.504 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.3180 (3) Å | Cell parameters from 8568 reflections |
b = 10.1567 (5) Å | θ = 2.8–35.0° |
c = 12.4721 (6) Å | µ = 0.35 mm−1 |
α = 96.686 (1)° | T = 100 K |
β = 95.285 (1)° | Plate, light purple |
γ = 95.229 (1)° | 0.51 × 0.23 × 0.07 mm |
V = 911.92 (7) Å3 |
Bruker SMART APEXII DUO CCD area-detector diffractometer | 6480 independent reflections |
Radiation source: fine-focus sealed tube | 5506 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
ϕ and ω scans | θmax = 32.5°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −11→11 |
Tmin = 0.842, Tmax = 0.976 | k = −15→15 |
18115 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0611P)2 + 0.3032P] where P = (Fo2 + 2Fc2)/3 |
6480 reflections | (Δ/σ)max = 0.001 |
257 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.27 e Å−3 |
C18H13ClN6O2S | γ = 95.229 (1)° |
Mr = 412.85 | V = 911.92 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.3180 (3) Å | Mo Kα radiation |
b = 10.1567 (5) Å | µ = 0.35 mm−1 |
c = 12.4721 (6) Å | T = 100 K |
α = 96.686 (1)° | 0.51 × 0.23 × 0.07 mm |
β = 95.285 (1)° |
Bruker SMART APEXII DUO CCD area-detector diffractometer | 6480 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 5506 reflections with I > 2σ(I) |
Tmin = 0.842, Tmax = 0.976 | Rint = 0.022 |
18115 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.53 e Å−3 |
6480 reflections | Δρmin = −0.27 e Å−3 |
257 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 1.07800 (5) | 0.08403 (3) | −0.18284 (3) | 0.03779 (9) | |
S1 | 0.17791 (4) | 0.27870 (3) | 0.20939 (2) | 0.02534 (8) | |
O1 | −0.27472 (13) | 0.52923 (9) | 0.54724 (7) | 0.02723 (18) | |
O2 | −0.14178 (14) | 0.66439 (9) | 0.43584 (8) | 0.02957 (19) | |
N1 | 0.32516 (14) | 0.31817 (9) | 0.01686 (8) | 0.02134 (17) | |
N2 | 0.16931 (14) | 0.38648 (10) | 0.02374 (7) | 0.02176 (17) | |
N3 | −0.07075 (13) | 0.42674 (10) | 0.12269 (8) | 0.02133 (17) | |
N4 | −0.14591 (13) | 0.45733 (9) | 0.21809 (7) | 0.01985 (17) | |
N5 | −0.27251 (13) | 0.33810 (9) | 0.45894 (7) | 0.01958 (16) | |
N6 | −0.32110 (15) | 0.39514 (10) | 0.55021 (8) | 0.02548 (19) | |
C1 | 0.63437 (17) | 0.17276 (12) | −0.03615 (9) | 0.0237 (2) | |
H1A | 0.5690 | 0.1433 | 0.0185 | 0.028* | |
C2 | 0.78848 (17) | 0.11197 (12) | −0.06418 (10) | 0.0265 (2) | |
H2A | 0.8263 | 0.0413 | −0.0295 | 0.032* | |
C3 | 0.88538 (17) | 0.15913 (12) | −0.14545 (10) | 0.0264 (2) | |
C4 | 0.83211 (18) | 0.26371 (12) | −0.19913 (10) | 0.0275 (2) | |
H4A | 0.8994 | 0.2941 | −0.2527 | 0.033* | |
C5 | 0.67620 (18) | 0.32191 (11) | −0.17115 (9) | 0.0250 (2) | |
H5A | 0.6374 | 0.3911 | −0.2073 | 0.030* | |
C6 | 0.57626 (16) | 0.27820 (11) | −0.08939 (9) | 0.02146 (19) | |
C7 | 0.41298 (16) | 0.34357 (11) | −0.06406 (9) | 0.0225 (2) | |
H7A | 0.3715 | 0.4053 | −0.1077 | 0.027* | |
C8 | 0.08764 (15) | 0.36783 (10) | 0.10979 (8) | 0.01926 (18) | |
C9 | −0.02848 (18) | 0.25579 (12) | 0.27750 (11) | 0.0272 (2) | |
H9A | −0.1132 | 0.1856 | 0.2353 | 0.033* | |
H9B | 0.0039 | 0.2276 | 0.3479 | 0.033* | |
C10 | −0.12334 (14) | 0.38080 (10) | 0.29279 (9) | 0.01908 (18) | |
C11 | −0.19794 (15) | 0.42203 (10) | 0.39393 (9) | 0.01953 (18) | |
C12 | −0.19652 (16) | 0.55221 (11) | 0.45021 (9) | 0.0229 (2) | |
C13 | −0.30832 (14) | 0.19503 (10) | 0.43535 (9) | 0.01922 (18) | |
C14 | −0.22133 (15) | 0.11515 (11) | 0.50272 (9) | 0.02130 (19) | |
H14A | −0.1436 | 0.1523 | 0.5641 | 0.026* | |
C15 | −0.25405 (16) | −0.02255 (11) | 0.47558 (10) | 0.0241 (2) | |
H15A | −0.1976 | −0.0784 | 0.5194 | 0.029* | |
C16 | −0.36970 (17) | −0.07694 (12) | 0.38406 (11) | 0.0257 (2) | |
H16A | −0.3901 | −0.1690 | 0.3667 | 0.031* | |
C17 | −0.45555 (17) | 0.00539 (12) | 0.31792 (10) | 0.0261 (2) | |
H17A | −0.5334 | −0.0318 | 0.2566 | 0.031* | |
C18 | −0.42526 (15) | 0.14293 (12) | 0.34325 (10) | 0.0235 (2) | |
H18A | −0.4820 | 0.1988 | 0.2995 | 0.028* | |
H1N3 | −0.095 (3) | 0.481 (2) | 0.0777 (16) | 0.040 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.02970 (16) | 0.03100 (16) | 0.0513 (2) | 0.00136 (11) | 0.01490 (14) | −0.00771 (13) |
S1 | 0.02671 (14) | 0.02899 (15) | 0.02507 (14) | 0.01210 (10) | 0.00651 (10) | 0.01304 (10) |
O1 | 0.0348 (5) | 0.0217 (4) | 0.0254 (4) | 0.0064 (3) | 0.0034 (3) | 0.0011 (3) |
O2 | 0.0342 (5) | 0.0175 (4) | 0.0367 (5) | 0.0035 (3) | 0.0001 (4) | 0.0044 (3) |
N1 | 0.0247 (4) | 0.0201 (4) | 0.0196 (4) | 0.0045 (3) | 0.0019 (3) | 0.0024 (3) |
N2 | 0.0257 (4) | 0.0222 (4) | 0.0183 (4) | 0.0059 (3) | 0.0016 (3) | 0.0039 (3) |
N3 | 0.0241 (4) | 0.0227 (4) | 0.0187 (4) | 0.0064 (3) | 0.0012 (3) | 0.0067 (3) |
N4 | 0.0212 (4) | 0.0194 (4) | 0.0196 (4) | 0.0031 (3) | 0.0011 (3) | 0.0054 (3) |
N5 | 0.0213 (4) | 0.0185 (4) | 0.0200 (4) | 0.0044 (3) | 0.0019 (3) | 0.0051 (3) |
N6 | 0.0314 (5) | 0.0235 (4) | 0.0228 (4) | 0.0057 (4) | 0.0055 (4) | 0.0042 (3) |
C1 | 0.0275 (5) | 0.0233 (5) | 0.0211 (5) | 0.0033 (4) | 0.0040 (4) | 0.0037 (4) |
C2 | 0.0280 (5) | 0.0254 (5) | 0.0262 (5) | 0.0047 (4) | 0.0037 (4) | 0.0021 (4) |
C3 | 0.0251 (5) | 0.0236 (5) | 0.0285 (5) | −0.0011 (4) | 0.0061 (4) | −0.0051 (4) |
C4 | 0.0320 (6) | 0.0228 (5) | 0.0259 (5) | −0.0057 (4) | 0.0093 (4) | −0.0023 (4) |
C5 | 0.0336 (6) | 0.0194 (5) | 0.0213 (5) | −0.0027 (4) | 0.0054 (4) | 0.0014 (4) |
C6 | 0.0261 (5) | 0.0193 (4) | 0.0184 (4) | 0.0010 (4) | 0.0027 (4) | 0.0007 (3) |
C7 | 0.0286 (5) | 0.0199 (5) | 0.0192 (4) | 0.0036 (4) | 0.0022 (4) | 0.0028 (3) |
C8 | 0.0220 (4) | 0.0168 (4) | 0.0187 (4) | 0.0023 (3) | −0.0007 (3) | 0.0032 (3) |
C9 | 0.0342 (6) | 0.0197 (5) | 0.0329 (6) | 0.0097 (4) | 0.0137 (5) | 0.0118 (4) |
C10 | 0.0200 (4) | 0.0160 (4) | 0.0223 (4) | 0.0030 (3) | 0.0022 (3) | 0.0058 (3) |
C11 | 0.0214 (4) | 0.0167 (4) | 0.0216 (4) | 0.0038 (3) | 0.0014 (3) | 0.0059 (3) |
C12 | 0.0240 (5) | 0.0197 (5) | 0.0251 (5) | 0.0053 (4) | −0.0007 (4) | 0.0040 (4) |
C13 | 0.0198 (4) | 0.0168 (4) | 0.0222 (4) | 0.0021 (3) | 0.0038 (3) | 0.0057 (3) |
C14 | 0.0233 (5) | 0.0209 (5) | 0.0213 (5) | 0.0043 (4) | 0.0035 (4) | 0.0070 (3) |
C15 | 0.0247 (5) | 0.0205 (5) | 0.0301 (5) | 0.0059 (4) | 0.0074 (4) | 0.0091 (4) |
C16 | 0.0247 (5) | 0.0189 (5) | 0.0347 (6) | 0.0008 (4) | 0.0099 (4) | 0.0039 (4) |
C17 | 0.0227 (5) | 0.0252 (5) | 0.0290 (5) | −0.0025 (4) | 0.0019 (4) | 0.0018 (4) |
C18 | 0.0205 (5) | 0.0242 (5) | 0.0259 (5) | 0.0004 (4) | −0.0005 (4) | 0.0074 (4) |
Cl1—C3 | 1.7379 (13) | C4—C5 | 1.3861 (18) |
S1—C8 | 1.7374 (10) | C4—H4A | 0.9300 |
S1—C9 | 1.8097 (12) | C5—C6 | 1.3984 (16) |
O1—N6 | 1.3788 (13) | C5—H5A | 0.9300 |
O1—C12 | 1.4197 (15) | C6—C7 | 1.4607 (16) |
O2—C12 | 1.2117 (14) | C7—H7A | 0.9300 |
N1—C7 | 1.2837 (15) | C9—C10 | 1.5030 (15) |
N1—N2 | 1.3921 (13) | C9—H9A | 0.9700 |
N2—C8 | 1.3000 (14) | C9—H9B | 0.9700 |
N3—C8 | 1.3659 (14) | C10—C11 | 1.4526 (15) |
N3—N4 | 1.3712 (13) | C11—C12 | 1.4217 (15) |
N3—H1N3 | 0.85 (2) | C13—C14 | 1.3870 (14) |
N4—C10 | 1.2896 (13) | C13—C18 | 1.3881 (16) |
N5—N6 | 1.3101 (14) | C14—C15 | 1.3935 (16) |
N5—C11 | 1.3563 (13) | C14—H14A | 0.9300 |
N5—C13 | 1.4434 (14) | C15—C16 | 1.3836 (18) |
C1—C2 | 1.3874 (17) | C15—H15A | 0.9300 |
C1—C6 | 1.4018 (16) | C16—C17 | 1.3912 (18) |
C1—H1A | 0.9300 | C16—H16A | 0.9300 |
C2—C3 | 1.3940 (17) | C17—C18 | 1.3886 (17) |
C2—H2A | 0.9300 | C17—H17A | 0.9300 |
C3—C4 | 1.3861 (19) | C18—H18A | 0.9300 |
C8—S1—C9 | 97.34 (5) | N3—C8—S1 | 119.98 (8) |
N6—O1—C12 | 111.31 (8) | C10—C9—S1 | 112.38 (8) |
C7—N1—N2 | 112.59 (9) | C10—C9—H9A | 109.1 |
C8—N2—N1 | 112.52 (9) | S1—C9—H9A | 109.1 |
C8—N3—N4 | 126.88 (9) | C10—C9—H9B | 109.1 |
C8—N3—H1N3 | 114.7 (14) | S1—C9—H9B | 109.1 |
N4—N3—H1N3 | 111.8 (14) | H9A—C9—H9B | 107.9 |
C10—N4—N3 | 118.20 (9) | N4—C10—C11 | 115.66 (9) |
N6—N5—C11 | 115.55 (9) | N4—C10—C9 | 123.01 (10) |
N6—N5—C13 | 117.95 (9) | C11—C10—C9 | 121.33 (9) |
C11—N5—C13 | 126.46 (9) | N5—C11—C12 | 105.58 (9) |
N5—N6—O1 | 104.02 (9) | N5—C11—C10 | 125.07 (9) |
C2—C1—C6 | 120.65 (11) | C12—C11—C10 | 129.17 (10) |
C2—C1—H1A | 119.7 | O2—C12—O1 | 120.14 (11) |
C6—C1—H1A | 119.7 | O2—C12—C11 | 136.24 (12) |
C1—C2—C3 | 118.54 (11) | O1—C12—C11 | 103.54 (9) |
C1—C2—H2A | 120.7 | C14—C13—C18 | 122.57 (10) |
C3—C2—H2A | 120.7 | C14—C13—N5 | 119.37 (10) |
C4—C3—C2 | 122.18 (11) | C18—C13—N5 | 118.04 (9) |
C4—C3—Cl1 | 118.32 (10) | C13—C14—C15 | 117.91 (10) |
C2—C3—Cl1 | 119.49 (10) | C13—C14—H14A | 121.0 |
C5—C4—C3 | 118.46 (11) | C15—C14—H14A | 121.0 |
C5—C4—H4A | 120.8 | C16—C15—C14 | 120.63 (10) |
C3—C4—H4A | 120.8 | C16—C15—H15A | 119.7 |
C4—C5—C6 | 121.04 (11) | C14—C15—H15A | 119.7 |
C4—C5—H5A | 119.5 | C15—C16—C17 | 120.33 (11) |
C6—C5—H5A | 119.5 | C15—C16—H16A | 119.8 |
C5—C6—C1 | 119.11 (11) | C17—C16—H16A | 119.8 |
C5—C6—C7 | 118.29 (10) | C18—C17—C16 | 120.13 (11) |
C1—C6—C7 | 122.59 (10) | C18—C17—H17A | 119.9 |
N1—C7—C6 | 121.78 (10) | C16—C17—H17A | 119.9 |
N1—C7—H7A | 119.1 | C13—C18—C17 | 118.43 (10) |
C6—C7—H7A | 119.1 | C13—C18—H18A | 120.8 |
N2—C8—N3 | 117.39 (9) | C17—C18—H18A | 120.8 |
N2—C8—S1 | 122.56 (8) | ||
C7—N1—N2—C8 | −175.59 (10) | S1—C9—C10—C11 | −137.68 (9) |
C8—N3—N4—C10 | −32.21 (16) | N6—N5—C11—C12 | 0.24 (13) |
C11—N5—N6—O1 | −0.32 (13) | C13—N5—C11—C12 | 177.95 (10) |
C13—N5—N6—O1 | −178.24 (9) | N6—N5—C11—C10 | 175.72 (10) |
C12—O1—N6—N5 | 0.28 (12) | C13—N5—C11—C10 | −6.57 (17) |
C6—C1—C2—C3 | 0.77 (18) | N4—C10—C11—N5 | 145.80 (11) |
C1—C2—C3—C4 | −0.37 (19) | C9—C10—C11—N5 | −33.52 (17) |
C1—C2—C3—Cl1 | −179.55 (9) | N4—C10—C11—C12 | −39.82 (16) |
C2—C3—C4—C5 | −0.58 (18) | C9—C10—C11—C12 | 140.87 (12) |
Cl1—C3—C4—C5 | 178.61 (9) | N6—O1—C12—O2 | −177.42 (10) |
C3—C4—C5—C6 | 1.14 (18) | N6—O1—C12—C11 | −0.15 (12) |
C4—C5—C6—C1 | −0.75 (17) | N5—C11—C12—O2 | 176.55 (13) |
C4—C5—C6—C7 | −179.85 (11) | C10—C11—C12—O2 | 1.3 (2) |
C2—C1—C6—C5 | −0.23 (17) | N5—C11—C12—O1 | −0.04 (11) |
C2—C1—C6—C7 | 178.83 (11) | C10—C11—C12—O1 | −175.28 (10) |
N2—N1—C7—C6 | −177.30 (10) | N6—N5—C13—C14 | −63.26 (14) |
C5—C6—C7—N1 | −172.94 (11) | C11—N5—C13—C14 | 119.08 (12) |
C1—C6—C7—N1 | 8.00 (18) | N6—N5—C13—C18 | 118.73 (11) |
N1—N2—C8—N3 | −177.81 (9) | C11—N5—C13—C18 | −58.93 (15) |
N1—N2—C8—S1 | 5.18 (14) | C18—C13—C14—C15 | 0.06 (16) |
N4—N3—C8—N2 | −157.47 (11) | N5—C13—C14—C15 | −177.86 (10) |
N4—N3—C8—S1 | 19.62 (15) | C13—C14—C15—C16 | 0.09 (16) |
C9—S1—C8—N2 | −165.26 (10) | C14—C15—C16—C17 | −0.21 (17) |
C9—S1—C8—N3 | 17.80 (10) | C15—C16—C17—C18 | 0.17 (18) |
C8—S1—C9—C10 | −43.84 (10) | C14—C13—C18—C17 | −0.10 (17) |
N3—N4—C10—C11 | 177.00 (9) | N5—C13—C18—C17 | 177.85 (10) |
N3—N4—C10—C9 | −3.70 (16) | C16—C17—C18—C13 | −0.01 (17) |
S1—C9—C10—N4 | 43.07 (15) |
Cg2 is the centroid of the C1–C6 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2i | 0.84 (2) | 2.03 (2) | 2.8752 (14) | 178 (2) |
C9—H9A···Cl1ii | 0.97 | 2.78 | 3.4904 (13) | 130 |
C18—H18A···S1iii | 0.93 | 2.86 | 3.6729 (12) | 147 |
C17—H17A···Cg2iv | 0.93 | 2.64 | 3.5208 (15) | 158 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y, −z; (iii) x−1, y, z; (iv) −x, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C18H13ClN6O2S |
Mr | 412.85 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.3180 (3), 10.1567 (5), 12.4721 (6) |
α, β, γ (°) | 96.686 (1), 95.285 (1), 95.229 (1) |
V (Å3) | 911.92 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.51 × 0.23 × 0.07 |
Data collection | |
Diffractometer | Bruker SMART APEXII DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.842, 0.976 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18115, 6480, 5506 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.756 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.113, 1.05 |
No. of reflections | 6480 |
No. of parameters | 257 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.53, −0.27 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg2 is the centroid of the C1–C6 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2i | 0.84 (2) | 2.03 (2) | 2.8752 (14) | 178 (2) |
C9—H9A···Cl1ii | 0.97 | 2.78 | 3.4904 (13) | 130 |
C18—H18A···S1iii | 0.93 | 2.86 | 3.6729 (12) | 147 |
C17—H17A···Cg2iv | 0.93 | 2.64 | 3.5208 (15) | 158 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y, −z; (iii) x−1, y, z; (iv) −x, −y, −z. |
Acknowledgements
The authors thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). WSL also thanks the Malaysian Government and USM for the award of a research fellowship.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Sydnones are a class of mesoionic compounds containing a 1,2,3-oxadiazole ring system. A number of sydnone derivatives have shown diverse biological activities such as anti-inflammatory, analgesic and anti-arthritic (Newton & Ramsden, 1982; Wagner & Hill, 1974) properties. Sydnones possessing heterocyclic moieties at the 4-position are also known for a wide range of biological properties (Kalluraya & Rahiman, 1997). Encouraged by these reports and in continuation of our research for biologically active nitrogen-containing heterocycles, a thiadiazine moiety at the 4-position of the phenylsydnone was introduced. The title compound was synthesized by the condensation of 4-bromoacetyl-3-arylsydnones with N'-[(4-chlorophenyl)methylidene]thiocarbonohydrazide. 4-Bromoacetyl-3-arylsydnones were in turn obtained by the photochemical bromination of 4-acetyl-3-arylsydnones (Kalluraya et al., 2003).
The title compound (Fig. 1) exists in trans and cis configurations with respect to the acyclic C7═N1 and C8═N2 bonds [C7═N1 = 1.2837 (15) Å and C8═N2 = 1.3000 (14) Å], respectively. The 3,6-dihydro-2H-1,3,4-thiadiazine ring (N3/N4/C10/C9/S1) adopts a half-boat conformation with the puckering parameter (Cremer & Pople, 1975), Q = 0.5266 (11) Å; Θ = 108.31 (12)°; ϕ = 138.02 (13)°. The sydnone ring (N5/N6/O1/C12/C11) is approximately planar with a maximum deviation of 0.002 (1) Å at atom N5 and forms dihedral angles of 50.45 (7)° and 61.21 (6)° with the phenyl rings (C1–C6 & C13–C18), respectively. Bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to the related structures (Fun et al., 2010; Fun & Loh et al., 2011; Fun & Quah et al., 2011).
In the crystal packing (Fig. 2), intermolecular N3—H1N3···N2, C9—H9A···Cl1 and C18—H18A···S1 hydrogen bonds (Table 1) link the molecules into layers parallel to ab plane. The crystal packing is stabilized by C—H···π interactions (Table 1) and further consolidated by π–π interactions (Table 1), involving the centroids of phenyl rings (Cg1; C13–C18) with the separation of Cg1···Cg1v being 3.6306 (7) Å [symmetry code: (v) -1 - x, -y, 1 - z].