organic compounds
N-[Bis(dimethylamino)methylidene]-2-[(triphenylmethyl)sulfanyl]ethanaminium hexafluorophosphate
aDepartment Chemie, Fakultät für Naturwissenschaften, Universität Paderborn, Warburgerstrasse 100, D-33098 Paderborn, Germany
*Correspondence e-mail: ulrich.floerke@upb.de
The molecular structure of the title compound, C26H32N3S+·PF6−, shows a protonated guanidyl group bridged by an ethylene linker with a tritylsulfanyl unit. The guanidinium (gua) unit displays charge delocalization over the three N—Cgua bonds. The N—C—C—S group shows a folded nonplanar conformation with a torsion angle of 158.4 (1)°. In the crystal, the cation and anion are linked by an N—H⋯F interaction.
Related literature
For the synthesis, see: Herres-Pawlis et al. (2005). For related structures, see: Flörke et al. (2006); Neuba et al. (2007c); Pruszynski et al. (1992). For related chemistry literature, see: Börner et al. (2007, 2009); Galezowski et al. (1994); Harmjanz (1997); Herres et al. (2005); Herres-Pawlis et al. (2009); Neuba (2009); Neuba et al. (2007a,b, 2008a,b, 2010, 2011); Peters et al. (2008); Pohl et al. (2000); Raab et al. (2003); Schneider (2000); Waden (1999); Wittman (1999); Wittmann et al. (2001).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and local programs.
Supporting information
10.1107/S1600536811014929/bt5504sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811014929/bt5504Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811014929/bt5504Isup3.cml
Preparation of the title compound: 1,1,3,3-Tetramethyl-2-[2-(tritylsulfanyl)-ethyl]guanidine (C26H31N3) (417 mg, 1 mmol) was added to a solution of [Cu(MeCN)4]PF6 (373 mg, 1 mmol) in acetonitrile (aqueous, 15 ml); the mixture was stirred for 15 min at room temperature and then refluxed for further 15 min and filtered off. Colourless crystals were obtained using the vapour pressure equalization method with this solution in the presence of diethylether.
H atoms were clearly identified in difference syntheses, idealized and refined riding on the C or N atoms with C—H = 0.95 (aromatic), 0.98 (methyl) and N—H 0.88 Å, and with isotropic displacement parameters Uiso(H) = 1.2U(C/Neq) or 1.5U(–CH3 H atoms). All CH3 H atoms were allowed to rotate but not to tip.
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and local programs.Fig. 1. Molecular structure with displacement ellipsoids drawn at the 50% probability level. H atoms omitted for clarity. |
C26H32N3S+·PF6− | Z = 2 |
Mr = 563.58 | F(000) = 588 |
Triclinic, P1 | Dx = 1.406 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.0111 (14) Å | Cell parameters from 786 reflections |
b = 9.1376 (15) Å | θ = 2.4–27.9° |
c = 17.564 (3) Å | µ = 0.25 mm−1 |
α = 96.532 (3)° | T = 120 K |
β = 100.225 (4)° | Block, colourless |
γ = 108.053 (3)° | 0.33 × 0.30 × 0.26 mm |
V = 1331.0 (4) Å3 |
Bruker SMART APEX diffractometer | 6281 independent reflections |
Radiation source: sealed tube | 4547 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.060 |
ϕ and ω scans | θmax = 27.9°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | h = −11→10 |
Tmin = 0.924, Tmax = 0.939 | k = −12→11 |
11922 measured reflections | l = −23→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0445P)2] where P = (Fo2 + 2Fc2)/3 |
6281 reflections | (Δ/σ)max < 0.001 |
338 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
C26H32N3S+·PF6− | γ = 108.053 (3)° |
Mr = 563.58 | V = 1331.0 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.0111 (14) Å | Mo Kα radiation |
b = 9.1376 (15) Å | µ = 0.25 mm−1 |
c = 17.564 (3) Å | T = 120 K |
α = 96.532 (3)° | 0.33 × 0.30 × 0.26 mm |
β = 100.225 (4)° |
Bruker SMART APEX diffractometer | 6281 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | 4547 reflections with I > 2σ(I) |
Tmin = 0.924, Tmax = 0.939 | Rint = 0.060 |
11922 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.96 | Δρmax = 0.38 e Å−3 |
6281 reflections | Δρmin = −0.42 e Å−3 |
338 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.77994 (6) | 0.61888 (5) | 0.29140 (3) | 0.02002 (12) | |
N1 | 0.6327 (2) | 0.89606 (18) | 0.43688 (9) | 0.0242 (4) | |
H1A | 0.6289 | 0.8850 | 0.4857 | 0.029* | |
N2 | 0.7383 (2) | 1.16512 (18) | 0.47245 (9) | 0.0253 (4) | |
N3 | 0.5695 (2) | 1.05179 (18) | 0.34970 (9) | 0.0252 (4) | |
C1 | 0.6470 (2) | 1.0380 (2) | 0.41911 (10) | 0.0211 (4) | |
C2 | 0.7029 (3) | 1.3121 (2) | 0.47981 (13) | 0.0378 (6) | |
H2A | 0.7840 | 1.3922 | 0.4625 | 0.057* | |
H2B | 0.7042 | 1.3471 | 0.5348 | 0.057* | |
H2C | 0.5969 | 1.2948 | 0.4470 | 0.057* | |
C3 | 0.8710 (3) | 1.1626 (3) | 0.53285 (12) | 0.0338 (5) | |
H3A | 0.8341 | 1.1432 | 0.5812 | 0.051* | |
H3B | 0.9578 | 1.2636 | 0.5434 | 0.051* | |
H3C | 0.9102 | 1.0792 | 0.5145 | 0.051* | |
C4 | 0.6343 (3) | 1.1837 (3) | 0.31065 (13) | 0.0407 (6) | |
H4A | 0.5737 | 1.2556 | 0.3145 | 0.061* | |
H4B | 0.6252 | 1.1443 | 0.2551 | 0.061* | |
H4C | 0.7473 | 1.2390 | 0.3362 | 0.061* | |
C5 | 0.4191 (3) | 0.9342 (3) | 0.30549 (12) | 0.0350 (5) | |
H5A | 0.4396 | 0.8717 | 0.2619 | 0.052* | |
H5B | 0.3447 | 0.9862 | 0.2845 | 0.052* | |
H5C | 0.3720 | 0.8657 | 0.3403 | 0.052* | |
C6 | 0.6227 (2) | 0.7568 (2) | 0.38190 (11) | 0.0245 (4) | |
H6A | 0.5129 | 0.7109 | 0.3485 | 0.029* | |
H6B | 0.6430 | 0.6775 | 0.4124 | 0.029* | |
C7 | 0.7419 (2) | 0.7943 (2) | 0.32952 (11) | 0.0207 (4) | |
H7A | 0.8437 | 0.8738 | 0.3601 | 0.025* | |
H7B | 0.6989 | 0.8384 | 0.2852 | 0.025* | |
C8 | 0.7037 (2) | 0.5855 (2) | 0.18294 (10) | 0.0173 (4) | |
C11 | 0.6980 (2) | 0.4160 (2) | 0.15696 (10) | 0.0177 (4) | |
C12 | 0.8390 (2) | 0.3816 (2) | 0.17641 (11) | 0.0226 (4) | |
H12A | 0.9333 | 0.4611 | 0.2068 | 0.027* | |
C13 | 0.8442 (2) | 0.2340 (2) | 0.15229 (12) | 0.0269 (4) | |
H13A | 0.9412 | 0.2127 | 0.1664 | 0.032* | |
C14 | 0.7079 (3) | 0.1177 (2) | 0.10767 (11) | 0.0270 (5) | |
H14A | 0.7109 | 0.0164 | 0.0906 | 0.032* | |
C15 | 0.5672 (3) | 0.1497 (2) | 0.08807 (11) | 0.0266 (4) | |
H15A | 0.4732 | 0.0697 | 0.0578 | 0.032* | |
C16 | 0.5622 (2) | 0.2984 (2) | 0.11234 (11) | 0.0220 (4) | |
H16A | 0.4649 | 0.3192 | 0.0982 | 0.026* | |
C21 | 0.5359 (2) | 0.5994 (2) | 0.16573 (10) | 0.0172 (4) | |
C22 | 0.4204 (2) | 0.5180 (2) | 0.20308 (10) | 0.0206 (4) | |
H22A | 0.4475 | 0.4567 | 0.2399 | 0.025* | |
C23 | 0.2669 (2) | 0.5248 (2) | 0.18760 (11) | 0.0230 (4) | |
H23A | 0.1900 | 0.4685 | 0.2138 | 0.028* | |
C24 | 0.2246 (2) | 0.6135 (2) | 0.13396 (11) | 0.0237 (4) | |
H24A | 0.1192 | 0.6181 | 0.1233 | 0.028* | |
C25 | 0.3372 (2) | 0.6948 (2) | 0.09638 (11) | 0.0235 (4) | |
H25A | 0.3092 | 0.7558 | 0.0596 | 0.028* | |
C26 | 0.4920 (2) | 0.6881 (2) | 0.11204 (11) | 0.0208 (4) | |
H26A | 0.5686 | 0.7448 | 0.0858 | 0.025* | |
C31 | 0.8208 (2) | 0.6940 (2) | 0.14281 (10) | 0.0183 (4) | |
C32 | 0.8071 (2) | 0.6503 (2) | 0.06202 (11) | 0.0231 (4) | |
H32A | 0.7257 | 0.5565 | 0.0338 | 0.028* | |
C33 | 0.9100 (2) | 0.7415 (2) | 0.02285 (11) | 0.0268 (4) | |
H33A | 0.8989 | 0.7100 | −0.0319 | 0.032* | |
C34 | 1.0294 (2) | 0.8785 (2) | 0.06290 (12) | 0.0259 (4) | |
H34A | 1.1011 | 0.9406 | 0.0361 | 0.031* | |
C35 | 1.0432 (2) | 0.9240 (2) | 0.14238 (12) | 0.0252 (4) | |
H35A | 1.1240 | 1.0185 | 0.1701 | 0.030* | |
C36 | 0.9401 (2) | 0.8329 (2) | 0.18186 (11) | 0.0216 (4) | |
H36A | 0.9512 | 0.8658 | 0.2365 | 0.026* | |
P1 | 0.19146 (7) | 0.27386 (6) | 0.37421 (3) | 0.02543 (13) | |
F1 | 0.02793 (18) | 0.13314 (18) | 0.35865 (10) | 0.0699 (5) | |
F2 | 0.20703 (19) | 0.22909 (16) | 0.28687 (7) | 0.0526 (4) | |
F3 | 0.35707 (17) | 0.41217 (16) | 0.39103 (9) | 0.0547 (4) | |
F4 | 0.10033 (18) | 0.38923 (16) | 0.34893 (8) | 0.0531 (4) | |
F5 | 0.18070 (19) | 0.31694 (17) | 0.46304 (8) | 0.0524 (4) | |
F6 | 0.28644 (18) | 0.15713 (16) | 0.40077 (7) | 0.0472 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0229 (3) | 0.0197 (2) | 0.0182 (2) | 0.0101 (2) | 0.00173 (19) | 0.00234 (17) |
N1 | 0.0361 (10) | 0.0218 (8) | 0.0170 (8) | 0.0095 (8) | 0.0118 (7) | 0.0047 (6) |
N2 | 0.0275 (10) | 0.0227 (8) | 0.0245 (9) | 0.0083 (7) | 0.0052 (7) | 0.0003 (7) |
N3 | 0.0312 (10) | 0.0246 (9) | 0.0219 (8) | 0.0126 (8) | 0.0058 (7) | 0.0043 (7) |
C1 | 0.0222 (11) | 0.0251 (10) | 0.0198 (9) | 0.0107 (8) | 0.0100 (8) | 0.0032 (8) |
C2 | 0.0447 (15) | 0.0216 (11) | 0.0446 (14) | 0.0110 (10) | 0.0088 (11) | −0.0019 (9) |
C3 | 0.0299 (12) | 0.0375 (12) | 0.0279 (11) | 0.0083 (10) | 0.0006 (10) | −0.0007 (9) |
C4 | 0.0584 (17) | 0.0377 (13) | 0.0347 (12) | 0.0214 (12) | 0.0157 (12) | 0.0186 (10) |
C5 | 0.0346 (13) | 0.0395 (13) | 0.0291 (11) | 0.0195 (11) | −0.0029 (10) | −0.0047 (9) |
C6 | 0.0339 (12) | 0.0191 (9) | 0.0225 (10) | 0.0103 (9) | 0.0093 (9) | 0.0031 (7) |
C7 | 0.0222 (10) | 0.0161 (9) | 0.0232 (10) | 0.0066 (8) | 0.0045 (8) | 0.0026 (7) |
C8 | 0.0179 (10) | 0.0160 (9) | 0.0159 (9) | 0.0045 (8) | 0.0018 (7) | 0.0019 (7) |
C11 | 0.0207 (10) | 0.0170 (9) | 0.0168 (9) | 0.0068 (8) | 0.0064 (8) | 0.0045 (7) |
C12 | 0.0195 (10) | 0.0198 (9) | 0.0273 (10) | 0.0057 (8) | 0.0054 (8) | 0.0022 (8) |
C13 | 0.0281 (12) | 0.0250 (10) | 0.0328 (11) | 0.0137 (9) | 0.0100 (9) | 0.0067 (8) |
C14 | 0.0374 (13) | 0.0169 (9) | 0.0292 (11) | 0.0108 (9) | 0.0122 (10) | 0.0018 (8) |
C15 | 0.0295 (12) | 0.0208 (10) | 0.0234 (10) | 0.0012 (9) | 0.0066 (9) | −0.0008 (8) |
C16 | 0.0215 (11) | 0.0224 (10) | 0.0204 (9) | 0.0069 (8) | 0.0026 (8) | 0.0020 (7) |
C21 | 0.0168 (10) | 0.0149 (8) | 0.0173 (9) | 0.0054 (7) | −0.0001 (7) | −0.0014 (7) |
C22 | 0.0227 (11) | 0.0200 (9) | 0.0211 (10) | 0.0091 (8) | 0.0044 (8) | 0.0065 (7) |
C23 | 0.0192 (10) | 0.0227 (10) | 0.0270 (10) | 0.0055 (8) | 0.0068 (8) | 0.0061 (8) |
C24 | 0.0173 (10) | 0.0258 (10) | 0.0287 (11) | 0.0100 (8) | 0.0033 (8) | 0.0033 (8) |
C25 | 0.0248 (11) | 0.0229 (10) | 0.0250 (10) | 0.0115 (9) | 0.0029 (9) | 0.0077 (8) |
C26 | 0.0210 (10) | 0.0191 (9) | 0.0230 (10) | 0.0070 (8) | 0.0052 (8) | 0.0057 (7) |
C31 | 0.0173 (10) | 0.0179 (9) | 0.0228 (9) | 0.0094 (8) | 0.0046 (8) | 0.0052 (7) |
C32 | 0.0210 (10) | 0.0216 (9) | 0.0246 (10) | 0.0057 (8) | 0.0023 (8) | 0.0044 (8) |
C33 | 0.0290 (12) | 0.0313 (11) | 0.0226 (10) | 0.0114 (10) | 0.0068 (9) | 0.0098 (8) |
C34 | 0.0246 (11) | 0.0262 (10) | 0.0336 (11) | 0.0122 (9) | 0.0110 (9) | 0.0155 (9) |
C35 | 0.0190 (10) | 0.0175 (9) | 0.0375 (12) | 0.0047 (8) | 0.0041 (9) | 0.0061 (8) |
C36 | 0.0197 (10) | 0.0200 (9) | 0.0253 (10) | 0.0078 (8) | 0.0044 (8) | 0.0033 (8) |
P1 | 0.0307 (3) | 0.0207 (3) | 0.0231 (3) | 0.0066 (2) | 0.0047 (2) | 0.0047 (2) |
F1 | 0.0451 (10) | 0.0428 (9) | 0.0994 (13) | −0.0102 (7) | 0.0113 (9) | 0.0027 (9) |
F2 | 0.0916 (12) | 0.0495 (9) | 0.0248 (7) | 0.0340 (9) | 0.0148 (7) | 0.0079 (6) |
F3 | 0.0403 (9) | 0.0380 (8) | 0.0720 (10) | −0.0026 (7) | 0.0121 (8) | 0.0015 (7) |
F4 | 0.0661 (11) | 0.0509 (9) | 0.0512 (9) | 0.0377 (8) | 0.0019 (8) | 0.0112 (7) |
F5 | 0.0803 (11) | 0.0580 (9) | 0.0337 (7) | 0.0362 (9) | 0.0256 (7) | 0.0098 (6) |
F6 | 0.0765 (11) | 0.0483 (8) | 0.0350 (7) | 0.0411 (8) | 0.0162 (7) | 0.0173 (6) |
S1—C7 | 1.8202 (17) | C13—C14 | 1.383 (3) |
S1—C8 | 1.8620 (18) | C13—H13A | 0.9500 |
N1—C1 | 1.341 (2) | C14—C15 | 1.381 (3) |
N1—C6 | 1.476 (2) | C14—H14A | 0.9500 |
N1—H1A | 0.8800 | C15—C16 | 1.394 (2) |
N2—C1 | 1.338 (2) | C15—H15A | 0.9500 |
N2—C3 | 1.459 (3) | C16—H16A | 0.9500 |
N2—C2 | 1.470 (2) | C21—C22 | 1.393 (3) |
N3—C1 | 1.333 (2) | C21—C26 | 1.394 (2) |
N3—C5 | 1.459 (3) | C22—C23 | 1.384 (3) |
N3—C4 | 1.469 (3) | C22—H22A | 0.9500 |
C2—H2A | 0.9800 | C23—C24 | 1.388 (3) |
C2—H2B | 0.9800 | C23—H23A | 0.9500 |
C2—H2C | 0.9800 | C24—C25 | 1.378 (3) |
C3—H3A | 0.9800 | C24—H24A | 0.9500 |
C3—H3B | 0.9800 | C25—C26 | 1.395 (3) |
C3—H3C | 0.9800 | C25—H25A | 0.9500 |
C4—H4A | 0.9800 | C26—H26A | 0.9500 |
C4—H4B | 0.9800 | C31—C36 | 1.390 (2) |
C4—H4C | 0.9800 | C31—C32 | 1.402 (2) |
C5—H5A | 0.9800 | C32—C33 | 1.381 (3) |
C5—H5B | 0.9800 | C32—H32A | 0.9500 |
C5—H5C | 0.9800 | C33—C34 | 1.384 (3) |
C6—C7 | 1.521 (3) | C33—H33A | 0.9500 |
C6—H6A | 0.9900 | C34—C35 | 1.383 (3) |
C6—H6B | 0.9900 | C34—H34A | 0.9500 |
C7—H7A | 0.9900 | C35—C36 | 1.385 (3) |
C7—H7B | 0.9900 | C35—H35A | 0.9500 |
C8—C21 | 1.537 (2) | C36—H36A | 0.9500 |
C8—C31 | 1.538 (2) | P1—F4 | 1.5801 (13) |
C8—C11 | 1.546 (2) | P1—F3 | 1.5814 (14) |
C11—C16 | 1.386 (3) | P1—F1 | 1.5819 (15) |
C11—C12 | 1.396 (3) | P1—F2 | 1.5842 (13) |
C12—C13 | 1.385 (2) | P1—F5 | 1.5924 (13) |
C12—H12A | 0.9500 | P1—F6 | 1.6202 (13) |
C7—S1—C8 | 105.13 (8) | C14—C13—H13A | 120.1 |
C1—N1—C6 | 125.84 (15) | C12—C13—H13A | 120.1 |
C1—N1—H1A | 117.1 | C15—C14—C13 | 119.59 (17) |
C6—N1—H1A | 117.1 | C15—C14—H14A | 120.2 |
C1—N2—C3 | 122.00 (16) | C13—C14—H14A | 120.2 |
C1—N2—C2 | 122.76 (17) | C14—C15—C16 | 120.53 (18) |
C3—N2—C2 | 114.95 (16) | C14—C15—H15A | 119.7 |
C1—N3—C5 | 122.70 (17) | C16—C15—H15A | 119.7 |
C1—N3—C4 | 121.96 (18) | C11—C16—C15 | 120.46 (18) |
C5—N3—C4 | 115.28 (17) | C11—C16—H16A | 119.8 |
N3—C1—N2 | 120.65 (17) | C15—C16—H16A | 119.8 |
N3—C1—N1 | 120.34 (17) | C22—C21—C26 | 117.89 (17) |
N2—C1—N1 | 119.01 (17) | C22—C21—C8 | 119.67 (15) |
N2—C2—H2A | 109.5 | C26—C21—C8 | 122.42 (17) |
N2—C2—H2B | 109.5 | C23—C22—C21 | 121.25 (17) |
H2A—C2—H2B | 109.5 | C23—C22—H22A | 119.4 |
N2—C2—H2C | 109.5 | C21—C22—H22A | 119.4 |
H2A—C2—H2C | 109.5 | C22—C23—C24 | 120.33 (18) |
H2B—C2—H2C | 109.5 | C22—C23—H23A | 119.8 |
N2—C3—H3A | 109.5 | C24—C23—H23A | 119.8 |
N2—C3—H3B | 109.5 | C25—C24—C23 | 119.29 (18) |
H3A—C3—H3B | 109.5 | C25—C24—H24A | 120.4 |
N2—C3—H3C | 109.5 | C23—C24—H24A | 120.4 |
H3A—C3—H3C | 109.5 | C24—C25—C26 | 120.40 (17) |
H3B—C3—H3C | 109.5 | C24—C25—H25A | 119.8 |
N3—C4—H4A | 109.5 | C26—C25—H25A | 119.8 |
N3—C4—H4B | 109.5 | C21—C26—C25 | 120.84 (18) |
H4A—C4—H4B | 109.5 | C21—C26—H26A | 119.6 |
N3—C4—H4C | 109.5 | C25—C26—H26A | 119.6 |
H4A—C4—H4C | 109.5 | C36—C31—C32 | 117.81 (17) |
H4B—C4—H4C | 109.5 | C36—C31—C8 | 123.97 (16) |
N3—C5—H5A | 109.5 | C32—C31—C8 | 118.22 (16) |
N3—C5—H5B | 109.5 | C33—C32—C31 | 121.00 (18) |
H5A—C5—H5B | 109.5 | C33—C32—H32A | 119.5 |
N3—C5—H5C | 109.5 | C31—C32—H32A | 119.5 |
H5A—C5—H5C | 109.5 | C32—C33—C34 | 120.39 (18) |
H5B—C5—H5C | 109.5 | C32—C33—H33A | 119.8 |
N1—C6—C7 | 112.59 (15) | C34—C33—H33A | 119.8 |
N1—C6—H6A | 109.1 | C35—C34—C33 | 119.25 (18) |
C7—C6—H6A | 109.1 | C35—C34—H34A | 120.4 |
N1—C6—H6B | 109.1 | C33—C34—H34A | 120.4 |
C7—C6—H6B | 109.1 | C34—C35—C36 | 120.53 (18) |
H6A—C6—H6B | 107.8 | C34—C35—H35A | 119.7 |
C6—C7—S1 | 110.58 (12) | C36—C35—H35A | 119.7 |
C6—C7—H7A | 109.5 | C35—C36—C31 | 121.02 (18) |
S1—C7—H7A | 109.5 | C35—C36—H36A | 119.5 |
C6—C7—H7B | 109.5 | C31—C36—H36A | 119.5 |
S1—C7—H7B | 109.5 | F4—P1—F3 | 90.03 (8) |
H7A—C7—H7B | 108.1 | F4—P1—F1 | 91.33 (9) |
C21—C8—C31 | 112.93 (14) | F3—P1—F1 | 178.58 (9) |
C21—C8—C11 | 111.65 (14) | F4—P1—F2 | 91.47 (8) |
C31—C8—C11 | 108.14 (14) | F3—P1—F2 | 89.85 (8) |
C21—C8—S1 | 108.93 (12) | F1—P1—F2 | 90.54 (9) |
C31—C8—S1 | 112.31 (12) | F4—P1—F5 | 90.31 (8) |
C11—C8—S1 | 102.41 (11) | F3—P1—F5 | 89.46 (8) |
C16—C11—C12 | 118.30 (16) | F1—P1—F5 | 90.11 (9) |
C16—C11—C8 | 123.45 (16) | F2—P1—F5 | 178.08 (8) |
C12—C11—C8 | 118.19 (16) | F4—P1—F6 | 179.38 (9) |
C13—C12—C11 | 121.31 (18) | F3—P1—F6 | 89.43 (8) |
C13—C12—H12A | 119.3 | F1—P1—F6 | 89.21 (9) |
C11—C12—H12A | 119.3 | F2—P1—F6 | 88.82 (7) |
C14—C13—C12 | 119.82 (18) | F5—P1—F6 | 89.39 (7) |
C5—N3—C1—N2 | −150.95 (18) | C14—C15—C16—C11 | −0.4 (3) |
C4—N3—C1—N2 | 32.1 (3) | C31—C8—C21—C22 | −174.76 (15) |
C5—N3—C1—N1 | 28.1 (3) | C11—C8—C21—C22 | 63.1 (2) |
C4—N3—C1—N1 | −148.85 (18) | S1—C8—C21—C22 | −49.25 (19) |
C3—N2—C1—N3 | −154.99 (18) | C31—C8—C21—C26 | 6.9 (2) |
C2—N2—C1—N3 | 31.5 (3) | C11—C8—C21—C26 | −115.21 (18) |
C3—N2—C1—N1 | 25.9 (3) | S1—C8—C21—C26 | 132.42 (15) |
C2—N2—C1—N1 | −147.63 (19) | C26—C21—C22—C23 | 0.0 (3) |
C6—N1—C1—N3 | 37.8 (3) | C8—C21—C22—C23 | −178.44 (16) |
C6—N1—C1—N2 | −143.12 (19) | C21—C22—C23—C24 | 0.1 (3) |
C1—N1—C6—C7 | 43.2 (3) | C22—C23—C24—C25 | −0.1 (3) |
N1—C6—C7—S1 | 158.36 (13) | C23—C24—C25—C26 | 0.0 (3) |
C8—S1—C7—C6 | 115.92 (14) | C22—C21—C26—C25 | 0.0 (3) |
C7—S1—C8—C21 | −47.42 (14) | C8—C21—C26—C25 | 178.32 (16) |
C7—S1—C8—C31 | 78.45 (13) | C24—C25—C26—C21 | 0.1 (3) |
C7—S1—C8—C11 | −165.77 (12) | C21—C8—C31—C36 | 103.47 (19) |
C21—C8—C11—C16 | 9.8 (2) | C11—C8—C31—C36 | −132.46 (17) |
C31—C8—C11—C16 | −115.03 (19) | S1—C8—C31—C36 | −20.2 (2) |
S1—C8—C11—C16 | 126.21 (16) | C21—C8—C31—C32 | −76.83 (19) |
C21—C8—C11—C12 | −173.28 (15) | C11—C8—C31—C32 | 47.2 (2) |
C31—C8—C11—C12 | 61.9 (2) | S1—C8—C31—C32 | 159.51 (14) |
S1—C8—C11—C12 | −56.87 (18) | C36—C31—C32—C33 | 0.7 (3) |
C16—C11—C12—C13 | −0.3 (3) | C8—C31—C32—C33 | −179.02 (16) |
C8—C11—C12—C13 | −177.34 (17) | C31—C32—C33—C34 | 0.1 (3) |
C11—C12—C13—C14 | 0.4 (3) | C32—C33—C34—C35 | −0.8 (3) |
C12—C13—C14—C15 | −0.5 (3) | C33—C34—C35—C36 | 0.8 (3) |
C13—C14—C15—C16 | 0.5 (3) | C34—C35—C36—C31 | 0.0 (3) |
C12—C11—C16—C15 | 0.3 (3) | C32—C31—C36—C35 | −0.7 (3) |
C8—C11—C16—C15 | 177.21 (17) | C8—C31—C36—C35 | 178.97 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···F6i | 0.88 | 2.13 | 2.949 (2) | 155 |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C26H32N3S+·PF6− |
Mr | 563.58 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 120 |
a, b, c (Å) | 9.0111 (14), 9.1376 (15), 17.564 (3) |
α, β, γ (°) | 96.532 (3), 100.225 (4), 108.053 (3) |
V (Å3) | 1331.0 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.25 |
Crystal size (mm) | 0.33 × 0.30 × 0.26 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2004) |
Tmin, Tmax | 0.924, 0.939 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11922, 6281, 4547 |
Rint | 0.060 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.104, 0.96 |
No. of reflections | 6281 |
No. of parameters | 338 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.42 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXTL (Sheldrick, 2008) and local programs.
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···F6i | 0.8800 | 2.1300 | 2.949 (2) | 155.00 |
Symmetry code: (i) −x+1, −y+1, −z+1. |
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The synthesis and characterization of novel molecules containing nitrogen and sulfur as donor functions and their application in synthesis of sulfur copper complexes is important for biomimetic copper–sulfur chemistry. In search of multifunctional ligands we have extended our studies to guanidyl-type systems with N-donor functions. The first derivative, the ligand bis(tetramethyl-guanidino)propylene as well as amine guanidine hybrids and their complexes with Cu, Fe, Ni, Ag, Mn, Co and Zn have recently been investigated (Harmjanz, 1997; Waden, 1999; Pohl et al., 2000; Schneider, 2000; Wittmann et al., 2001; Herres-Pawlis et al., 2005, 2009; Herres et al., 2005; Neuba et al., 2008a,b, 2010; Börner et al. 2007, 2009). We have now developed several sulfur guanidine hybrids based on aminothiophenol and cysteamine (Neuba et al., 2007a,b,c; Neuba, 2009). The synthesized sulfur guanidine compounds possess aliphatic and aromatic thioethers or disulfide groups and were used in the synthesis of copper thiolate complexes to mimic active centres like the CuA in cytochrome-c oxidase and N2O-reductase (Neuba et al., 2011). The title compound (I) is the protonated variant of 1,1,3,3-Tetramethyl-2-[2-(tritylsulfanyl)-ethyl]guanidine (C26H31N3) (Neuba et al., 2007c). Both compounds possess a folded non-planar conformation with torsion angles of the S—C—C—N group of 66.04 (15) in C26H31N3 and 158.36 (13)° in I. Compared to C26H32N3 with localized N═Cgua double bond (N═Cgua: 1.281 (2), N—Cgua: 1.399 (2) and 1.292 (2) Å) the respective double bond in I is clearly delocalized over the guanidine unit (N═Cgua: 1.341 (2), N—Cgua: 1.3938 (2) and 1.333 (2) Å). Several variants of protonated bis(tetramethyl-guanidino)propylene (Flörke et al., 2006) show similar N—C (1.326 (7)–1.341 (6) Å) and N—Cgua bond lengths (1.331 (2)–1.343 (3) Å). In bis(tetramethylguanidino)biphenyl (Pruszynski et al., 1992), with a protonated imine N atom, strong delocalization is also observed among the three C—N bonds, which are in the range of 1.31 (1)-1.34 (1) Å. Further protonated guanidine units show comparable N—Cgua– and N═Cgua geometries (Herres-Pawlis et al., 2005; Herres et al., 2005; Wittman, 1999; Peters et al., 2008, Galezowski et al., 1994, Raab et al., 2003).
The crystal packing exhibits N1—H···F6(-x + 1, -y + 1, -z + 1) intermolecular interaction from cation to anion with H···F = 2.127 Å.