metal-organic compounds
Dibromidobis(pyridine-3-carbonitrile-κN1)mercury(II)
aDepartment of Chemistry, Basic Science Faculty, East Tehran Branch, Islamic Azad University, Qiam Dasht, Tehran, Iran
*Correspondence e-mail: rezaghiasi1975@gmail.com
In the 2(C6H4N2)2], the Hg atom is four coordinated by two pyridine N atoms and two Br− anions in a considerably distorted tetrahedral environment. π–π interactions between adjacent pyridine rings [centroid–centroid distance of 3.648 (3) Å] stabilize the crystal structure.
of the title compound, [HgBrRelated literature
For related structures, see: Ghiasi (2011); Steffen & Palenik (1977); Li et al. (2004).
Experimental
Crystal data
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536811013274/bt5511sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811013274/bt5511Isup2.hkl
Mercury(II) bromide (0.72 gr, 2 mmol) was disolved in methanol (12 ml) and the solution was mixed with a methanolic solution (10 ml) of 3-pyridinecarbonitrile (0.42 g, 4 mmol). This solution was left to evaporate slowly at room temperature. After one week, colorless prismatic crystals of the title compound were isolated (yield 0.64 g, 56.0%, m.p. < 570 K).
All H atoms were positioned geometrically, with C—H=0.96Å aromatics hydrogen atoms and constrained to ride on their parent atoms, with Uiso(H)=1.2Ueq.
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. | |
Fig. 2. Unit-cell packing diagram for (I). |
[HgBr2(C6H4N2)2] | Z = 2 |
Mr = 568.61 | F(000) = 516 |
Triclinic, P1 | Dx = 2.549 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.5823 (6) Å | Cell parameters from 8405 reflections |
b = 9.4069 (6) Å | θ = 2.2–29.2° |
c = 9.8562 (7) Å | µ = 15.78 mm−1 |
α = 81.935 (5)° | T = 120 K |
β = 71.435 (6)° | Prism, colorless |
γ = 80.508 (6)° | 0.45 × 0.22 × 0.2 mm |
V = 740.70 (9) Å3 |
Bruker SMART CCD diffractometer | 3751 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
phi and ω scans | θmax = 29.2°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −11→11 |
Tmin = 0.033, Tmax = 0.052 | k = −12→12 |
8486 measured reflections | l = −13→13 |
3967 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.18 | w = 1/[σ2(Fo2) + (0.0481P)2 + 0.8751P] where P = (Fo2 + 2Fc2)/3 |
3967 reflections | (Δ/σ)max = 0.013 |
172 parameters | Δρmax = 1.13 e Å−3 |
0 restraints | Δρmin = −2.48 e Å−3 |
[HgBr2(C6H4N2)2] | γ = 80.508 (6)° |
Mr = 568.61 | V = 740.70 (9) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.5823 (6) Å | Mo Kα radiation |
b = 9.4069 (6) Å | µ = 15.78 mm−1 |
c = 9.8562 (7) Å | T = 120 K |
α = 81.935 (5)° | 0.45 × 0.22 × 0.2 mm |
β = 71.435 (6)° |
Bruker SMART CCD diffractometer | 3967 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 3751 reflections with I > 2σ(I) |
Tmin = 0.033, Tmax = 0.052 | Rint = 0.043 |
8486 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.18 | Δρmax = 1.13 e Å−3 |
3967 reflections | Δρmin = −2.48 e Å−3 |
172 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.0093 (6) | 0.7134 (5) | 0.4103 (5) | 0.0225 (9) | |
H1 | 0.0187 | 0.784 | 0.4635 | 0.027* | |
C2 | −0.1379 (6) | 0.6544 (5) | 0.4499 (6) | 0.0239 (9) | |
H2 | −0.2248 | 0.6851 | 0.5286 | 0.029* | |
C3 | −0.1559 (7) | 0.5491 (5) | 0.3719 (5) | 0.0241 (9) | |
H3 | −0.2534 | 0.5073 | 0.3971 | 0.029* | |
C4 | −0.0218 (6) | 0.5089 (5) | 0.2548 (5) | 0.0224 (9) | |
C5 | −0.0290 (6) | 0.4010 (5) | 0.1668 (6) | 0.0241 (9) | |
C6 | 0.1248 (7) | 0.5712 (5) | 0.2222 (5) | 0.0227 (9) | |
H6 | 0.2146 | 0.5409 | 0.1454 | 0.027* | |
C7 | 0.2284 (7) | 1.0208 (6) | −0.0244 (6) | 0.0277 (10) | |
H7 | 0.1906 | 1.0754 | 0.0541 | 0.033* | |
C8 | 0.1848 (9) | 1.0747 (6) | −0.1468 (6) | 0.0355 (13) | |
H8 | 0.1204 | 1.1641 | −0.1508 | 0.043* | |
C9 | 0.2387 (8) | 0.9933 (6) | −0.2636 (6) | 0.0308 (11) | |
H9 | 0.2099 | 1.0259 | −0.347 | 0.037* | |
C10 | 0.3368 (6) | 0.8616 (5) | −0.2530 (5) | 0.0221 (9) | |
C11 | 0.3959 (7) | 0.7725 (6) | −0.3706 (6) | 0.0265 (10) | |
C12 | 0.3758 (7) | 0.8154 (5) | −0.1251 (5) | 0.0237 (9) | |
H12 | 0.4413 | 0.7271 | −0.118 | 0.028* | |
Br1 | 0.59621 (7) | 0.60216 (6) | 0.12550 (6) | 0.02802 (12) | |
Br2 | 0.25093 (7) | 1.02533 (5) | 0.34027 (6) | 0.02714 (12) | |
Hg1 | 0.38539 (2) | 0.805335 (18) | 0.216864 (18) | 0.02106 (7) | |
N1 | 0.1397 (5) | 0.6727 (5) | 0.2979 (4) | 0.0223 (8) | |
N2 | −0.0327 (6) | 0.3162 (5) | 0.0956 (6) | 0.0311 (10) | |
N3 | 0.3219 (6) | 0.8943 (5) | −0.0129 (5) | 0.0238 (8) | |
N4 | 0.4417 (7) | 0.7012 (5) | −0.4646 (6) | 0.0351 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.027 (2) | 0.019 (2) | 0.022 (2) | 0.0020 (17) | −0.0076 (19) | −0.0081 (17) |
C2 | 0.020 (2) | 0.025 (2) | 0.024 (2) | 0.0023 (17) | −0.0048 (18) | −0.0038 (18) |
C3 | 0.027 (2) | 0.022 (2) | 0.021 (2) | −0.0032 (18) | −0.0052 (19) | 0.0010 (18) |
C4 | 0.025 (2) | 0.022 (2) | 0.021 (2) | −0.0013 (18) | −0.0076 (18) | −0.0055 (17) |
C5 | 0.024 (2) | 0.024 (2) | 0.025 (2) | −0.0017 (18) | −0.0073 (19) | −0.0041 (18) |
C6 | 0.025 (2) | 0.022 (2) | 0.020 (2) | −0.0005 (17) | −0.0043 (18) | −0.0075 (17) |
C7 | 0.035 (3) | 0.024 (2) | 0.025 (2) | 0.002 (2) | −0.010 (2) | −0.0065 (19) |
C8 | 0.055 (4) | 0.025 (2) | 0.026 (3) | 0.010 (2) | −0.017 (3) | −0.007 (2) |
C9 | 0.043 (3) | 0.025 (2) | 0.026 (2) | 0.004 (2) | −0.016 (2) | −0.005 (2) |
C10 | 0.025 (2) | 0.021 (2) | 0.020 (2) | −0.0017 (17) | −0.0062 (18) | −0.0037 (17) |
C11 | 0.031 (3) | 0.025 (2) | 0.024 (2) | 0.0001 (19) | −0.011 (2) | −0.0036 (19) |
C12 | 0.027 (2) | 0.021 (2) | 0.024 (2) | −0.0018 (18) | −0.010 (2) | −0.0032 (18) |
Br1 | 0.0268 (2) | 0.0291 (2) | 0.0289 (3) | 0.00759 (19) | −0.0111 (2) | −0.01227 (19) |
Br2 | 0.0334 (3) | 0.0236 (2) | 0.0239 (2) | 0.00029 (19) | −0.0065 (2) | −0.01056 (18) |
Hg1 | 0.02188 (10) | 0.02100 (10) | 0.02036 (10) | 0.00031 (7) | −0.00584 (7) | −0.00698 (7) |
N1 | 0.024 (2) | 0.0245 (19) | 0.0182 (18) | −0.0005 (15) | −0.0058 (16) | −0.0068 (15) |
N2 | 0.030 (2) | 0.029 (2) | 0.034 (2) | −0.0031 (18) | −0.007 (2) | −0.0104 (19) |
N3 | 0.023 (2) | 0.0250 (19) | 0.022 (2) | 0.0014 (16) | −0.0068 (16) | −0.0052 (16) |
N4 | 0.044 (3) | 0.031 (2) | 0.031 (2) | −0.001 (2) | −0.010 (2) | −0.009 (2) |
C1—N1 | 1.347 (6) | C7—H7 | 0.93 |
C1—C2 | 1.384 (7) | C8—C9 | 1.385 (8) |
C1—H1 | 0.93 | C8—H8 | 0.93 |
C2—C3 | 1.391 (7) | C9—C10 | 1.389 (7) |
C2—H2 | 0.93 | C9—H9 | 0.93 |
C3—C4 | 1.390 (7) | C10—C12 | 1.399 (7) |
C3—H3 | 0.93 | C10—C11 | 1.436 (7) |
C4—C6 | 1.401 (7) | C11—N4 | 1.148 (7) |
C4—C5 | 1.446 (7) | C12—N3 | 1.334 (7) |
C5—N2 | 1.144 (7) | C12—H12 | 0.93 |
C6—N1 | 1.337 (6) | Br1—Hg1 | 2.4581 (5) |
C6—H6 | 0.93 | Br2—Hg1 | 2.4736 (5) |
C7—N3 | 1.333 (7) | Hg1—N1 | 2.481 (4) |
C7—C8 | 1.381 (8) | Hg1—N3 | 2.496 (4) |
N1—C1—C2 | 122.7 (5) | C8—C9—C10 | 118.4 (5) |
N1—C1—H1 | 118.7 | C8—C9—H9 | 120.8 |
C2—C1—H1 | 118.7 | C10—C9—H9 | 120.8 |
C1—C2—C3 | 120.0 (5) | C9—C10—C12 | 119.1 (5) |
C1—C2—H2 | 120 | C9—C10—C11 | 120.7 (5) |
C3—C2—H2 | 120 | C12—C10—C11 | 120.1 (4) |
C4—C3—C2 | 117.1 (5) | N4—C11—C10 | 179.3 (6) |
C4—C3—H3 | 121.4 | N3—C12—C10 | 121.9 (5) |
C2—C3—H3 | 121.4 | N3—C12—H12 | 119 |
C3—C4—C6 | 120.0 (5) | C10—C12—H12 | 119 |
C3—C4—C5 | 121.2 (5) | Br1—Hg1—Br2 | 159.99 (2) |
C6—C4—C5 | 118.8 (5) | Br1—Hg1—N1 | 98.01 (10) |
N2—C5—C4 | 179.0 (6) | Br2—Hg1—N1 | 97.02 (10) |
N1—C6—C4 | 122.1 (5) | Br1—Hg1—N3 | 97.22 (10) |
N1—C6—H6 | 119 | Br2—Hg1—N3 | 95.88 (10) |
C4—C6—H6 | 119 | N1—Hg1—N3 | 90.10 (14) |
N3—C7—C8 | 123.4 (5) | C6—N1—C1 | 118.1 (4) |
N3—C7—H7 | 118.3 | C6—N1—Hg1 | 121.2 (3) |
C8—C7—H7 | 118.3 | C1—N1—Hg1 | 120.3 (3) |
C7—C8—C9 | 118.7 (5) | C7—N3—C12 | 118.5 (5) |
C7—C8—H8 | 120.6 | C7—N3—Hg1 | 120.3 (3) |
C9—C8—H8 | 120.6 | C12—N3—Hg1 | 121.2 (3) |
N1—C1—C2—C3 | −0.3 (8) | C2—C1—N1—C6 | 0.0 (7) |
C1—C2—C3—C4 | −0.5 (7) | C2—C1—N1—Hg1 | 172.5 (4) |
C2—C3—C4—C6 | 1.7 (7) | Br1—Hg1—N1—C6 | −38.3 (4) |
C2—C3—C4—C5 | −179.7 (5) | Br2—Hg1—N1—C6 | 155.0 (4) |
C3—C4—C5—N2 | 16E1 (4) | N3—Hg1—N1—C6 | 59.0 (4) |
C6—C4—C5—N2 | −2E1 (4) | Br1—Hg1—N1—C1 | 149.5 (4) |
C3—C4—C6—N1 | −2.1 (8) | Br2—Hg1—N1—C1 | −17.2 (4) |
C5—C4—C6—N1 | 179.3 (5) | N3—Hg1—N1—C1 | −113.2 (4) |
N3—C7—C8—C9 | 0.8 (10) | C8—C7—N3—C12 | −0.2 (9) |
C7—C8—C9—C10 | −1.0 (10) | C8—C7—N3—Hg1 | −178.2 (5) |
C8—C9—C10—C12 | 0.7 (9) | C10—C12—N3—C7 | −0.1 (8) |
C8—C9—C10—C11 | 179.9 (6) | C10—C12—N3—Hg1 | 177.9 (4) |
C9—C10—C11—N4 | −6E1 (5) | Br1—Hg1—N3—C7 | −169.9 (4) |
C12—C10—C11—N4 | 12E1 (5) | Br2—Hg1—N3—C7 | −5.0 (4) |
C9—C10—C12—N3 | −0.2 (8) | N1—Hg1—N3—C7 | 92.1 (4) |
C11—C10—C12—N3 | −179.3 (5) | Br1—Hg1—N3—C12 | 12.2 (4) |
C4—C6—N1—C1 | 1.2 (7) | Br2—Hg1—N3—C12 | 177.1 (4) |
C4—C6—N1—Hg1 | −171.2 (4) | N1—Hg1—N3—C12 | −85.9 (4) |
Experimental details
Crystal data | |
Chemical formula | [HgBr2(C6H4N2)2] |
Mr | 568.61 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 120 |
a, b, c (Å) | 8.5823 (6), 9.4069 (6), 9.8562 (7) |
α, β, γ (°) | 81.935 (5), 71.435 (6), 80.508 (6) |
V (Å3) | 740.70 (9) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 15.78 |
Crystal size (mm) | 0.45 × 0.22 × 0.2 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.033, 0.052 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8486, 3967, 3751 |
Rint | 0.043 |
(sin θ/λ)max (Å−1) | 0.686 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.084, 1.18 |
No. of reflections | 3967 |
No. of parameters | 172 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.13, −2.48 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXTL (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
References
Bruker (1998). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Ghiasi, R. (2011). Acta Cryst. E67, m101. Web of Science CrossRef IUCr Journals Google Scholar
Li, X.-H., Wu, H.-Y. & Hu, J.-G. (2004). Acta Cryst. E60, m1533–m1535. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Steffen, W. L. & Palenik, G. J. (1977). Inorg. Chem. 16, 1119–1127. CSD CrossRef CAS Web of Science Google Scholar
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Recently, the crystal satructure of dibromozinc(II)-di-3-pyridine-carbonitrile have been reported, (Ghiasi, 2011). On the other hand there are several complexes, with formula, [MX2L2], such as [ZnCl2(4-cypy)2], (Steffen & Palenik, 1977), [CuBr2(3-Cypy)2], (Li et al. 2004), [where py is pyridine, 4-cypy is 4-cyanopyridine and 3-cypy is 3-cyanopyridine] have been synthesized and characterized by single-crystal X-ray diffraction methods. The molecular structure of the title compound is shown in Fig. 1. The HgII atom is four-coordinated in a slightly distorted tetrahedral configuration by two N atoms from two pyridine rings and two Br- anions. The Hg—Br and Hg—N bond distances and angles (Table 1) are within normal ranges. π-π interactions between adjacent pyridine rings [centroid···centroid distance of 3.648 (3) Å, symmetry code: –x,1-y,1-z] stabilize the packing of the crystal structure.