metal-organic compounds
Aquabis(3-fluorobenzoato-κO)(1,10-phenanthroline-κ2N,N′)copper(II)
aDepartment of Chemistry, East China University of Science and Technology, School of Chemistry and Molecular Engineering, Mei Long Road 130, Shanghai 200237, People's Republic of China
*Correspondence e-mail: yoshikiyin@ecust.edu.cn
In the title compound, [Cu(C7H4FO2)2(C12H8N2)(H2O)], the coordination around the CuII atom is square-pyramidal. The equatorial positions are occupied by two N atoms from a 1,10-phenanthroline ligand [Cu—N = 2.008 (3) and 2.019 (3) Å] and two O atoms from 3-fluorobenzoate ligands and a water molecule [Cu—O = 1.950 (2) and 1.978 (2) Å]. One O atom from another 3-fluorobenzoate ligand occupies the apical positon [Cu—O = 2.210 (2) Å]. Hydrogen bonds occur between coordinated water molecules and benzoate ligands, while O—H⋯O, C—H⋯O, C—H⋯F and π–π stacking [centroid–centroid distance = 3.731 (2) Å] interactions consolidate the crystal packing.
Related literature
A number of copper SOD mimetics (SOD = superoxide dismutase) have been shown to possess antitumor activity and have been proposed as a new class of potential anticancer agents, see: Devereux et al. (2007). Phenoxyalkanoic acids interact with Cu(II) ions to form complexes which have been shown to have diverse stereochemistries, see: Smith et al. (1981, 1982). For the structures of similar coordination compounds, see: Liu et al. (2009); Zhu & Xiao (2006).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT-Plus (Bruker, 2003); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811012220/hg5016sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811012220/hg5016Isup2.hkl
All reagents were obtained from commercial sources and used without further purification. CuCl2.2H2O (0.017 g, 0.10 mmol) was successively added to 20 ml CH3OH, H2O (1:1, v/v)solution. Then 3-fluorobenzoic acid (0.028 g, 0.20 mmol) and 1,10-phenanthroline (0.017 g, 0.10 mmol) were subsequently added. The pH value of the mixture was adjusted to about 5.5 with NaOH solution and stirred continuously for 1 h to give a blue clear solution. After filtration, the blue filtrate was allowed to stand at room temperature for one week to give blue block-shaped crystals suitable for X-ray analysis.Analysis required for C26H18CuF2N2O5: C 57.83, H 3.36, N 5.19%; found: C 57.64, H 3.58, N 5.09%. m.p. 463.5-464 K.
All C-bound H atoms were positioned geometrically and treated as riding, with C—H = 0.93Å and Uiso(H) = 1.2Ueq(C). The water H atoms were found in a difference Fourier map and refined freely.
Data collection: SMART (Bruker, 2001); cell
SAINT-Plus (Bruker, 2003); data reduction: SAINT-Plus (Bruker, 2003); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), (thermal ellipsoids are shown at 30% probability levels). |
[Cu(C7H4FO2)2(C12H8N2)(H2O)] | Z = 2 |
Mr = 539.96 | F(000) = 550 |
Triclinic, P1 | Dx = 1.602 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.9914 (8) Å | Cell parameters from 2269 reflections |
b = 10.7258 (9) Å | θ = 2.4–23.9° |
c = 11.6166 (10) Å | µ = 1.04 mm−1 |
α = 73.208 (1)° | T = 295 K |
β = 70.082 (1)° | Block, blue |
γ = 86.293 (1)° | 0.25 × 0.20 × 0.15 mm |
V = 1119.74 (16) Å3 |
Bruker APEXII CCD diffractometer | 3972 independent reflections |
Radiation source: fine-focus sealed tube | 2924 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.058 |
ϕ and ω scans | θmax = 25.2°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −11→10 |
Tmin = 0.782, Tmax = 0.860 | k = −12→12 |
5876 measured reflections | l = −13→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.132 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0675P)2] where P = (Fo2 + 2Fc2)/3 |
3972 reflections | (Δ/σ)max < 0.001 |
325 parameters | Δρmax = 0.99 e Å−3 |
0 restraints | Δρmin = −0.47 e Å−3 |
[Cu(C7H4FO2)2(C12H8N2)(H2O)] | γ = 86.293 (1)° |
Mr = 539.96 | V = 1119.74 (16) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.9914 (8) Å | Mo Kα radiation |
b = 10.7258 (9) Å | µ = 1.04 mm−1 |
c = 11.6166 (10) Å | T = 295 K |
α = 73.208 (1)° | 0.25 × 0.20 × 0.15 mm |
β = 70.082 (1)° |
Bruker APEXII CCD diffractometer | 3972 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2924 reflections with I > 2σ(I) |
Tmin = 0.782, Tmax = 0.860 | Rint = 0.058 |
5876 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.132 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.99 e Å−3 |
3972 reflections | Δρmin = −0.47 e Å−3 |
325 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.1039 (5) | 0.3825 (4) | 0.2313 (4) | 0.0699 (13) | |
H1 | −0.1100 | 0.2939 | 0.2400 | 0.084* | |
C2 | −0.2204 (5) | 0.4403 (6) | 0.2961 (5) | 0.0823 (15) | |
H2 | −0.3030 | 0.3900 | 0.3478 | 0.099* | |
C3 | −0.2174 (5) | 0.5693 (5) | 0.2861 (4) | 0.0766 (14) | |
H3 | −0.2971 | 0.6075 | 0.3301 | 0.092* | |
C4 | −0.0929 (4) | 0.6439 (4) | 0.2089 (4) | 0.0575 (10) | |
C5 | −0.0752 (5) | 0.7814 (5) | 0.1881 (4) | 0.0686 (12) | |
H5 | −0.1507 | 0.8262 | 0.2288 | 0.082* | |
C6 | 0.0486 (5) | 0.8471 (4) | 0.1106 (4) | 0.0610 (11) | |
H6 | 0.0569 | 0.9360 | 0.0995 | 0.073* | |
C7 | 0.1661 (4) | 0.7829 (3) | 0.0457 (4) | 0.0460 (9) | |
C8 | 0.2980 (4) | 0.8451 (3) | −0.0358 (4) | 0.0503 (9) | |
H8 | 0.3121 | 0.9341 | −0.0512 | 0.060* | |
C9 | 0.4045 (4) | 0.7747 (3) | −0.0918 (3) | 0.0487 (9) | |
H9 | 0.4912 | 0.8159 | −0.1471 | 0.058* | |
C10 | 0.3850 (4) | 0.6403 (3) | −0.0670 (3) | 0.0423 (8) | |
H10 | 0.4601 | 0.5931 | −0.1045 | 0.051* | |
C11 | 0.1545 (4) | 0.6493 (3) | 0.0640 (3) | 0.0400 (8) | |
C12 | 0.0226 (4) | 0.5790 (4) | 0.1455 (3) | 0.0456 (9) | |
C13 | 0.2143 (4) | 0.2156 (3) | 0.3195 (3) | 0.0470 (9) | |
C14 | 0.2732 (4) | 0.1690 (3) | 0.4278 (3) | 0.0432 (8) | |
C15 | 0.2137 (4) | 0.0593 (4) | 0.5261 (3) | 0.0516 (9) | |
H15 | 0.1346 | 0.0157 | 0.5289 | 0.062* | |
C16 | 0.2740 (5) | 0.0158 (4) | 0.6198 (4) | 0.0584 (11) | |
C17 | 0.3895 (4) | 0.0746 (4) | 0.6215 (4) | 0.0569 (10) | |
H17 | 0.4276 | 0.0405 | 0.6864 | 0.068* | |
C18 | 0.4494 (5) | 0.1861 (4) | 0.5246 (4) | 0.0603 (11) | |
H18 | 0.5270 | 0.2299 | 0.5241 | 0.072* | |
C19 | 0.3909 (4) | 0.2315 (4) | 0.4279 (4) | 0.0538 (10) | |
H19 | 0.4316 | 0.3056 | 0.3615 | 0.065* | |
C20 | 0.4248 (4) | 0.2594 (3) | −0.1064 (4) | 0.0503 (9) | |
C21 | 0.5686 (4) | 0.2694 (4) | −0.2072 (4) | 0.0514 (10) | |
C22 | 0.6404 (5) | 0.3875 (4) | −0.2736 (4) | 0.0632 (11) | |
H22 | 0.6000 | 0.4637 | −0.2567 | 0.076* | |
C23 | 0.7713 (5) | 0.3922 (5) | −0.3647 (4) | 0.0757 (14) | |
C24 | 0.8378 (6) | 0.2835 (5) | −0.3942 (5) | 0.0802 (14) | |
H24 | 0.9261 | 0.2901 | −0.4580 | 0.096* | |
C25 | 0.7682 (6) | 0.1643 (5) | −0.3252 (5) | 0.0765 (14) | |
H25 | 0.8108 | 0.0883 | −0.3406 | 0.092* | |
C26 | 0.6352 (5) | 0.1575 (4) | −0.2331 (4) | 0.0640 (12) | |
H26 | 0.5893 | 0.0765 | −0.1876 | 0.077* | |
Cu1 | 0.20778 (5) | 0.38751 (4) | 0.05953 (4) | 0.04433 (19) | |
F1 | 0.2173 (4) | −0.0908 (3) | 0.7161 (3) | 0.1306 (14) | |
F3 | 0.8389 (4) | 0.5091 (3) | −0.4302 (3) | 0.1242 (13) | |
N1 | 0.2605 (3) | 0.5780 (3) | 0.0096 (3) | 0.0395 (7) | |
N2 | 0.0190 (3) | 0.4496 (3) | 0.1555 (3) | 0.0498 (8) | |
O1 | 0.1097 (3) | 0.1514 (3) | 0.3257 (3) | 0.0654 (8) | |
O2 | 0.2767 (3) | 0.3139 (2) | 0.2280 (2) | 0.0486 (6) | |
O3 | 0.3809 (3) | 0.3625 (2) | −0.0732 (2) | 0.0494 (6) | |
O4 | 0.3565 (3) | 0.1534 (3) | −0.0605 (3) | 0.0765 (9) | |
O1W | 0.1185 (3) | 0.2161 (2) | 0.0909 (3) | 0.0591 (7) | |
H1W | 0.1159 | 0.1795 | 0.1675 | 0.089* | |
H2W | 0.1895 | 0.1784 | 0.0524 | 0.089* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.053 (3) | 0.068 (3) | 0.073 (3) | −0.016 (2) | −0.019 (2) | 0.006 (2) |
C2 | 0.044 (3) | 0.104 (4) | 0.071 (3) | −0.013 (3) | −0.004 (2) | 0.001 (3) |
C3 | 0.048 (3) | 0.104 (4) | 0.062 (3) | 0.004 (3) | −0.005 (2) | −0.015 (3) |
C4 | 0.045 (2) | 0.076 (3) | 0.052 (2) | 0.007 (2) | −0.017 (2) | −0.020 (2) |
C5 | 0.065 (3) | 0.079 (3) | 0.077 (3) | 0.022 (2) | −0.028 (3) | −0.043 (3) |
C6 | 0.070 (3) | 0.055 (2) | 0.074 (3) | 0.018 (2) | −0.035 (2) | −0.033 (2) |
C7 | 0.059 (2) | 0.0390 (19) | 0.050 (2) | 0.0075 (17) | −0.0283 (19) | −0.0163 (17) |
C8 | 0.069 (3) | 0.0305 (18) | 0.055 (2) | −0.0027 (18) | −0.028 (2) | −0.0089 (17) |
C9 | 0.054 (2) | 0.0401 (19) | 0.047 (2) | −0.0096 (17) | −0.0141 (18) | −0.0052 (17) |
C10 | 0.048 (2) | 0.0339 (18) | 0.042 (2) | −0.0013 (15) | −0.0135 (17) | −0.0069 (15) |
C11 | 0.042 (2) | 0.0411 (19) | 0.0388 (19) | 0.0018 (15) | −0.0186 (16) | −0.0084 (16) |
C12 | 0.043 (2) | 0.051 (2) | 0.041 (2) | 0.0009 (17) | −0.0171 (17) | −0.0057 (17) |
C13 | 0.052 (2) | 0.040 (2) | 0.046 (2) | 0.0026 (17) | −0.0149 (18) | −0.0108 (18) |
C14 | 0.050 (2) | 0.0377 (18) | 0.0373 (19) | 0.0029 (16) | −0.0101 (16) | −0.0094 (15) |
C15 | 0.062 (3) | 0.047 (2) | 0.044 (2) | −0.0095 (18) | −0.0163 (19) | −0.0093 (18) |
C16 | 0.080 (3) | 0.045 (2) | 0.040 (2) | −0.009 (2) | −0.020 (2) | 0.0035 (18) |
C17 | 0.068 (3) | 0.057 (2) | 0.046 (2) | 0.001 (2) | −0.025 (2) | −0.0077 (19) |
C18 | 0.067 (3) | 0.059 (2) | 0.049 (2) | −0.002 (2) | −0.020 (2) | −0.007 (2) |
C19 | 0.059 (2) | 0.047 (2) | 0.046 (2) | −0.0093 (18) | −0.0140 (19) | −0.0020 (18) |
C20 | 0.062 (3) | 0.042 (2) | 0.057 (2) | 0.0039 (18) | −0.032 (2) | −0.0160 (19) |
C21 | 0.068 (3) | 0.044 (2) | 0.055 (2) | 0.0104 (19) | −0.030 (2) | −0.0217 (19) |
C22 | 0.077 (3) | 0.055 (2) | 0.054 (3) | 0.012 (2) | −0.015 (2) | −0.021 (2) |
C23 | 0.080 (3) | 0.069 (3) | 0.062 (3) | 0.005 (3) | −0.007 (3) | −0.016 (3) |
C24 | 0.084 (4) | 0.096 (4) | 0.066 (3) | 0.024 (3) | −0.024 (3) | −0.038 (3) |
C25 | 0.092 (4) | 0.075 (3) | 0.085 (4) | 0.027 (3) | −0.041 (3) | −0.049 (3) |
C26 | 0.079 (3) | 0.055 (2) | 0.077 (3) | 0.011 (2) | −0.039 (3) | −0.034 (2) |
Cu1 | 0.0507 (3) | 0.0328 (3) | 0.0478 (3) | −0.00640 (18) | −0.0178 (2) | −0.00571 (19) |
F1 | 0.169 (3) | 0.110 (2) | 0.103 (2) | −0.072 (2) | −0.081 (2) | 0.043 (2) |
F3 | 0.113 (3) | 0.091 (2) | 0.110 (3) | −0.0060 (19) | 0.029 (2) | −0.018 (2) |
N1 | 0.0405 (16) | 0.0362 (15) | 0.0383 (16) | −0.0007 (13) | −0.0112 (13) | −0.0076 (13) |
N2 | 0.0462 (19) | 0.0481 (18) | 0.0471 (18) | −0.0098 (14) | −0.0152 (15) | 0.0005 (14) |
O1 | 0.0704 (19) | 0.0583 (16) | 0.0621 (18) | −0.0245 (14) | −0.0326 (16) | 0.0093 (14) |
O2 | 0.0559 (16) | 0.0416 (13) | 0.0425 (14) | −0.0088 (11) | −0.0175 (12) | 0.0004 (12) |
O3 | 0.0595 (16) | 0.0316 (12) | 0.0563 (16) | 0.0019 (11) | −0.0172 (13) | −0.0142 (12) |
O4 | 0.076 (2) | 0.0439 (15) | 0.110 (3) | −0.0078 (15) | −0.0196 (18) | −0.0350 (17) |
O1W | 0.0714 (19) | 0.0472 (14) | 0.0597 (17) | −0.0153 (13) | −0.0244 (15) | −0.0100 (13) |
C1—N2 | 1.347 (5) | C15—H15 | 0.9300 |
C1—C2 | 1.374 (6) | C16—F1 | 1.338 (4) |
C1—H1 | 0.9300 | C16—C17 | 1.359 (6) |
C2—C3 | 1.357 (7) | C17—C18 | 1.383 (5) |
C2—H2 | 0.9300 | C17—H17 | 0.9300 |
C3—C4 | 1.395 (6) | C18—C19 | 1.391 (5) |
C3—H3 | 0.9300 | C18—H18 | 0.9300 |
C4—C12 | 1.404 (5) | C19—H19 | 0.9300 |
C4—C5 | 1.437 (6) | C20—O4 | 1.243 (4) |
C5—C6 | 1.350 (6) | C20—O3 | 1.277 (4) |
C5—H5 | 0.9300 | C20—C21 | 1.500 (5) |
C6—C7 | 1.419 (5) | C21—C22 | 1.375 (5) |
C6—H6 | 0.9300 | C21—C26 | 1.394 (5) |
C7—C11 | 1.393 (5) | C22—C23 | 1.367 (6) |
C7—C8 | 1.407 (5) | C22—H22 | 0.9300 |
C8—C9 | 1.354 (5) | C23—F3 | 1.347 (5) |
C8—H8 | 0.9300 | C23—C24 | 1.376 (6) |
C9—C10 | 1.398 (5) | C24—C25 | 1.379 (7) |
C9—H9 | 0.9300 | C24—H24 | 0.9300 |
C10—N1 | 1.340 (4) | C25—C26 | 1.384 (6) |
C10—H10 | 0.9300 | C25—H25 | 0.9300 |
C11—N1 | 1.351 (4) | C26—H26 | 0.9300 |
C11—C12 | 1.438 (5) | Cu1—O3 | 1.950 (2) |
C12—N2 | 1.360 (5) | Cu1—O1W | 1.978 (2) |
C13—O1 | 1.259 (4) | Cu1—N1 | 2.008 (3) |
C13—O2 | 1.272 (4) | Cu1—N2 | 2.019 (3) |
C13—C14 | 1.510 (5) | Cu1—O2 | 2.210 (2) |
C14—C15 | 1.376 (5) | O1W—H1W | 0.8545 |
C14—C19 | 1.392 (5) | O1W—H2W | 0.8462 |
C15—C16 | 1.373 (5) | ||
N2—C1—C2 | 122.3 (4) | C18—C17—H17 | 120.7 |
N2—C1—H1 | 118.9 | C17—C18—C19 | 118.6 (4) |
C2—C1—H1 | 118.9 | C17—C18—H18 | 120.7 |
C3—C2—C1 | 121.2 (4) | C19—C18—H18 | 120.7 |
C3—C2—H2 | 119.4 | C18—C19—C14 | 121.7 (3) |
C1—C2—H2 | 119.4 | C18—C19—H19 | 119.1 |
C2—C3—C4 | 119.0 (4) | C14—C19—H19 | 119.1 |
C2—C3—H3 | 120.5 | O4—C20—O3 | 124.3 (4) |
C4—C3—H3 | 120.5 | O4—C20—C21 | 118.9 (3) |
C3—C4—C12 | 117.0 (4) | O3—C20—C21 | 116.8 (3) |
C3—C4—C5 | 125.0 (4) | C22—C21—C26 | 118.1 (4) |
C12—C4—C5 | 118.0 (4) | C22—C21—C20 | 121.5 (3) |
C6—C5—C4 | 121.5 (4) | C26—C21—C20 | 120.4 (4) |
C6—C5—H5 | 119.3 | C23—C22—C21 | 119.6 (4) |
C4—C5—H5 | 119.3 | C23—C22—H22 | 120.2 |
C5—C6—C7 | 121.2 (4) | C21—C22—H22 | 120.2 |
C5—C6—H6 | 119.4 | F3—C23—C22 | 118.7 (4) |
C7—C6—H6 | 119.4 | F3—C23—C24 | 118.0 (4) |
C11—C7—C8 | 116.4 (3) | C22—C23—C24 | 123.4 (5) |
C11—C7—C6 | 119.4 (4) | C23—C24—C25 | 117.3 (5) |
C8—C7—C6 | 124.2 (4) | C23—C24—H24 | 121.3 |
C9—C8—C7 | 119.7 (3) | C25—C24—H24 | 121.3 |
C9—C8—H8 | 120.2 | C24—C25—C26 | 120.2 (4) |
C7—C8—H8 | 120.2 | C24—C25—H25 | 119.9 |
C8—C9—C10 | 120.4 (3) | C26—C25—H25 | 119.9 |
C8—C9—H9 | 119.8 | C25—C26—C21 | 121.4 (4) |
C10—C9—H9 | 119.8 | C25—C26—H26 | 119.3 |
N1—C10—C9 | 121.5 (3) | C21—C26—H26 | 119.3 |
N1—C10—H10 | 119.2 | O3—Cu1—O1W | 94.85 (10) |
C9—C10—H10 | 119.2 | O3—Cu1—N1 | 90.11 (10) |
N1—C11—C7 | 124.4 (3) | O1W—Cu1—N1 | 165.91 (11) |
N1—C11—C12 | 115.9 (3) | O3—Cu1—N2 | 164.15 (11) |
C7—C11—C12 | 119.7 (3) | O1W—Cu1—N2 | 90.67 (12) |
N2—C12—C4 | 123.9 (3) | N1—Cu1—N2 | 81.29 (11) |
N2—C12—C11 | 115.9 (3) | O3—Cu1—O2 | 99.65 (10) |
C4—C12—C11 | 120.2 (4) | O1W—Cu1—O2 | 91.54 (10) |
O1—C13—O2 | 125.3 (3) | N1—Cu1—O2 | 100.63 (10) |
O1—C13—C14 | 117.2 (3) | N2—Cu1—O2 | 95.04 (11) |
O2—C13—C14 | 117.5 (3) | C10—N1—C11 | 117.6 (3) |
C15—C14—C19 | 118.9 (4) | C10—N1—Cu1 | 128.7 (2) |
C15—C14—C13 | 119.7 (3) | C11—N1—Cu1 | 113.7 (2) |
C19—C14—C13 | 121.4 (3) | C1—N2—C12 | 116.6 (4) |
C16—C15—C14 | 118.3 (4) | C1—N2—Cu1 | 130.3 (3) |
C16—C15—H15 | 120.8 | C12—N2—Cu1 | 113.0 (2) |
C14—C15—H15 | 120.8 | C13—O2—Cu1 | 121.4 (2) |
F1—C16—C17 | 117.1 (4) | C20—O3—Cu1 | 129.5 (2) |
F1—C16—C15 | 119.0 (4) | Cu1—O1W—H1W | 100.5 |
C17—C16—C15 | 123.9 (4) | Cu1—O1W—H2W | 100.5 |
C16—C17—C18 | 118.6 (4) | H1W—O1W—H2W | 98.7 |
C16—C17—H17 | 120.7 | ||
N2—C1—C2—C3 | 0.4 (8) | F3—C23—C24—C25 | 179.2 (5) |
C1—C2—C3—C4 | −0.3 (8) | C22—C23—C24—C25 | −1.4 (8) |
C2—C3—C4—C12 | 0.2 (7) | C23—C24—C25—C26 | 1.8 (7) |
C2—C3—C4—C5 | 179.1 (5) | C24—C25—C26—C21 | −0.3 (7) |
C3—C4—C5—C6 | −179.3 (4) | C22—C21—C26—C25 | −1.6 (6) |
C12—C4—C5—C6 | −0.4 (6) | C20—C21—C26—C25 | −179.6 (4) |
C4—C5—C6—C7 | 0.4 (7) | C9—C10—N1—C11 | −1.0 (5) |
C5—C6—C7—C11 | −1.1 (6) | C9—C10—N1—Cu1 | −179.8 (3) |
C5—C6—C7—C8 | −179.7 (4) | C7—C11—N1—C10 | −0.1 (5) |
C11—C7—C8—C9 | 0.3 (5) | C12—C11—N1—C10 | 179.9 (3) |
C6—C7—C8—C9 | 179.0 (4) | C7—C11—N1—Cu1 | 178.9 (3) |
C7—C8—C9—C10 | −1.3 (6) | C12—C11—N1—Cu1 | −1.1 (4) |
C8—C9—C10—N1 | 1.7 (6) | O3—Cu1—N1—C10 | −12.2 (3) |
C8—C7—C11—N1 | 0.4 (5) | O1W—Cu1—N1—C10 | −123.0 (5) |
C6—C7—C11—N1 | −178.4 (3) | N2—Cu1—N1—C10 | −178.9 (3) |
C8—C7—C11—C12 | −179.6 (3) | O2—Cu1—N1—C10 | 87.6 (3) |
C6—C7—C11—C12 | 1.7 (5) | O3—Cu1—N1—C11 | 168.9 (2) |
C3—C4—C12—N2 | 0.0 (6) | O1W—Cu1—N1—C11 | 58.1 (5) |
C5—C4—C12—N2 | −179.0 (4) | N2—Cu1—N1—C11 | 2.3 (2) |
C3—C4—C12—C11 | 179.9 (4) | O2—Cu1—N1—C11 | −91.2 (2) |
C5—C4—C12—C11 | 0.9 (6) | C2—C1—N2—C12 | −0.2 (6) |
N1—C11—C12—N2 | −1.7 (5) | C2—C1—N2—Cu1 | 175.7 (3) |
C7—C11—C12—N2 | 178.3 (3) | C4—C12—N2—C1 | 0.0 (5) |
N1—C11—C12—C4 | 178.4 (3) | C11—C12—N2—C1 | −179.9 (3) |
C7—C11—C12—C4 | −1.6 (5) | C4—C12—N2—Cu1 | −176.5 (3) |
O1—C13—C14—C15 | 1.1 (5) | C11—C12—N2—Cu1 | 3.5 (4) |
O2—C13—C14—C15 | −176.9 (3) | O3—Cu1—N2—C1 | 123.0 (4) |
O1—C13—C14—C19 | 178.3 (4) | O1W—Cu1—N2—C1 | 12.5 (4) |
O2—C13—C14—C19 | 0.3 (5) | N1—Cu1—N2—C1 | −179.2 (4) |
C19—C14—C15—C16 | −0.4 (5) | O2—Cu1—N2—C1 | −79.1 (4) |
C13—C14—C15—C16 | 176.9 (3) | O3—Cu1—N2—C12 | −61.0 (5) |
C14—C15—C16—F1 | −180.0 (4) | O1W—Cu1—N2—C12 | −171.6 (3) |
C14—C15—C16—C17 | −0.1 (6) | N1—Cu1—N2—C12 | −3.2 (2) |
F1—C16—C17—C18 | −179.0 (4) | O2—Cu1—N2—C12 | 96.8 (2) |
C15—C16—C17—C18 | 1.1 (7) | O1—C13—O2—Cu1 | −0.4 (5) |
C16—C17—C18—C19 | −1.6 (6) | C14—C13—O2—Cu1 | 177.4 (2) |
C17—C18—C19—C14 | 1.1 (6) | O3—Cu1—O2—C13 | −118.2 (3) |
C15—C14—C19—C18 | −0.1 (6) | O1W—Cu1—O2—C13 | −23.0 (3) |
C13—C14—C19—C18 | −177.4 (3) | N1—Cu1—O2—C13 | 149.9 (3) |
O4—C20—C21—C22 | 171.0 (4) | N2—Cu1—O2—C13 | 67.8 (3) |
O3—C20—C21—C22 | −9.2 (5) | O4—C20—O3—Cu1 | 3.8 (6) |
O4—C20—C21—C26 | −11.0 (6) | C21—C20—O3—Cu1 | −176.0 (2) |
O3—C20—C21—C26 | 168.8 (3) | O1W—Cu1—O3—C20 | −10.8 (3) |
C26—C21—C22—C23 | 1.9 (6) | N1—Cu1—O3—C20 | −177.6 (3) |
C20—C21—C22—C23 | 179.9 (4) | N2—Cu1—O3—C20 | −120.8 (4) |
C21—C22—C23—F3 | 179.0 (4) | O2—Cu1—O3—C20 | 81.6 (3) |
C21—C22—C23—C24 | −0.5 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O1 | 0.85 | 1.75 | 2.585 (4) | 163 |
O1W—H2W···O4 | 0.85 | 1.80 | 2.612 (4) | 161 |
C10—H10···O3 | 0.93 | 2.53 | 3.005 (4) | 112 |
C1—H1···F1i | 0.93 | 2.33 | 3.213 (6) | 158 |
C8—H8···O4ii | 0.93 | 2.39 | 3.309 (4) | 171 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C7H4FO2)2(C12H8N2)(H2O)] |
Mr | 539.96 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 295 |
a, b, c (Å) | 9.9914 (8), 10.7258 (9), 11.6166 (10) |
α, β, γ (°) | 73.208 (1), 70.082 (1), 86.293 (1) |
V (Å3) | 1119.74 (16) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.04 |
Crystal size (mm) | 0.25 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.782, 0.860 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5876, 3972, 2924 |
Rint | 0.058 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.132, 1.03 |
No. of reflections | 3972 |
No. of parameters | 325 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.99, −0.47 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2003), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W···O1 | 0.85 | 1.75 | 2.585 (4) | 163 |
O1W—H2W···O4 | 0.85 | 1.80 | 2.612 (4) | 161 |
C10—H10···O3 | 0.93 | 2.53 | 3.005 (4) | 112 |
C1—H1···F1i | 0.93 | 2.33 | 3.213 (6) | 158.0 |
C8—H8···O4ii | 0.93 | 2.39 | 3.309 (4) | 171.1 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y+1, z. |
Acknowledgements
This work was supported by the College of Chemistry and Molecular Engineering, East China University of Science and Technology.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
A number of copper SOD mimetics have been shown to possess antitumor activity and have been proposed as a new class of potential anticancer agents (Devereux et al. 2007). Morever, phenoxyalkanoic acids interact with Cu(II) ions to form complexes which have been shown to have diverse stereochemistries (Smith et al. 1981,1982). Studying structure of such copper complexes is important to the understanding of copper biochemistry. Therefore, we have synthesized the title compound, (I), and report its crystal structure here.
In the title monomer complex, the copper atom adopts a square pyramidal environment defined by two nitrogen donors from the 1,10-phenanthroline ligand, two carboxyl oxygen atoms from two 3-fluorobenzoate ligands and one oxygen atom from the coordinated water molecule O atom (Fig. 1). Atoms N1, N2, O3, and O1w are sitting on the basal plane, while atom O2 occupies the apical position. Each 3-fluorobenzoate ligand is mono-coordinated to the metal atom. The coordinated water molecule acts as double donor to the carbonyl groups of the 3-fluorobenzoate ligands, forming two intramolecular O-H···O hydrogen bonds (Table 1), which consolidates the solid structure. The crystal packing exhibits also weak intermolecularC—H···O hydrogen bonds, π–π interactions and short intermolecular C—H···F Contacts. Similar coordination is observed in other Cu structures (Liu et al.,2009; Zhu et al., 2006).