metal-organic compounds
[N,N,N′,N′-Tetrakis(benzimidazol-2-ylmethyl)cyclohexane-1,2-trans-diamine]iron(II) bis(perchlorate) methanol solvate
aKey Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, People's Republic of China
*Correspondence e-mail: lanshemin@163.com
In the title compound, [Fe(C38H38N10)](ClO4)2·CH3OH, the FeII atom has a distorted octahedral coordination environment with four benzimidazol N atoms and two amino N atoms from an N,N,N′,N′-tetrakis(benzimidazol-2-ylmethyl)cyclohexane-1,2-trans-diamine ligand. The uncoordinated solvent methanol molecule is hydrogen bonded to an O atom of a perchlorate anion. One of the perchlorate anions is disordered over two sets of sites with occupancy factors of 0.539 (14) and 0.461 (14). N—H⋯O and C—H⋯O hydrogen bonds, as well as π–π stacking interactions between the imidazol rings and between the imidazol and benzene rings [centroid–centroid distances = 3.714 (2) and 3.705 (2) Å] give rise to a three-dimensional network.
Related literature
For model systems containing pyrazole chelates and related groups, see: Main (1992). For iron complexes with N,N,N′,N′-tetrakis(2-benzimidazolylmethyl)cyclohexane-1,2-trans-diamine, see: Mei et al. (2010); Zhao et al. (2005). For the synthesis of the ligand, see: Hendriks et al. (1982).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
10.1107/S1600536811011810/hy2418sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811011810/hy2418Isup2.hkl
All reagents and solvents were used as obtained without further purification. The ctb ligand was prepared according to literature methods (Hendriks et al., 1982). Equimolar amounts of ctb (63.4 mg, 0.10 mmol) and Fe(ClO4)2.6H2O (36.3 mg, 0.10 mmol) were dissolved in 25 ml MeOH, and the solution was stirred for 10 min. After filtration, colorless crystals of the title compound (yield: 79 mg, 85% ) were obtained by diffusion of diethyl ether into the filtrate after one week under Ar atmosphere.
One of the perchlorate anions is disordered over two positions and the command 'DFIX' was used in the refinements. The final most satisfactory occupancies for the major and minor components were 0.539 (14) and 0.461 (14), respectively.
C-bound H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 (aromatic), 0.97 (methylene) and 0.96 (methyl) Å and Uiso(H) = 1.2(1.5 for methyl)Ueq(C). H atoms attached to C2 and C7 were refined isotropically. N- and O-bound H atoms were first found in difference Fourier maps and then placed at their ideal postions, with N—H = 0.86 and O—H = 0.82 Å and Uiso(H) = 1.2Ueq(N) or 1.5Ueq(O).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. Molecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level. H atoms have been omitted for clarity. | |
Fig. 2. Crystal packing of the title compound, showing the formation of the three-dimensional network by hydrogen bonds and π–π interactions. H atoms not involved in the motif have been omitted for clarity. |
[Fe(C38H38N10)](ClO4)2·CH4O | F(000) = 1912 |
Mr = 921.58 | Dx = 1.459 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 8487 reflections |
a = 14.3867 (6) Å | θ = 2.4–28.0° |
b = 15.9145 (6) Å | µ = 0.55 mm−1 |
c = 18.8218 (8) Å | T = 298 K |
β = 103.175 (1)° | Block, colorless |
V = 4196.0 (3) Å3 | 0.30 × 0.16 × 0.10 mm |
Z = 4 |
Bruker APEX CCD diffractometer | 5765 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.083 |
Graphite monochromator | θmax = 25.0°, θmin = 2.0° |
ϕ and ω scans | h = −15→17 |
21311 measured reflections | k = −17→18 |
7369 independent reflections | l = −22→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.176 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | w = 1/[σ2(Fo2) + (0.1022P)2 + 2.0578P] where P = (Fo2 + 2Fc2)/3 |
7369 reflections | (Δ/σ)max < 0.001 |
612 parameters | Δρmax = 0.57 e Å−3 |
10 restraints | Δρmin = −0.53 e Å−3 |
[Fe(C38H38N10)](ClO4)2·CH4O | V = 4196.0 (3) Å3 |
Mr = 921.58 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 14.3867 (6) Å | µ = 0.55 mm−1 |
b = 15.9145 (6) Å | T = 298 K |
c = 18.8218 (8) Å | 0.30 × 0.16 × 0.10 mm |
β = 103.175 (1)° |
Bruker APEX CCD diffractometer | 5765 reflections with I > 2σ(I) |
21311 measured reflections | Rint = 0.083 |
7369 independent reflections |
R[F2 > 2σ(F2)] = 0.056 | 10 restraints |
wR(F2) = 0.176 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.57 e Å−3 |
7369 reflections | Δρmin = −0.53 e Å−3 |
612 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Fe1 | 0.49217 (3) | 0.51266 (3) | 0.25944 (3) | 0.03221 (18) | |
N1 | 0.40904 (18) | 0.63557 (16) | 0.22008 (16) | 0.0340 (6) | |
N2 | 0.59753 (19) | 0.61865 (17) | 0.31077 (17) | 0.0367 (7) | |
N3 | 0.5240 (2) | 0.53017 (17) | 0.15388 (17) | 0.0387 (7) | |
N4 | 0.5194 (2) | 0.61519 (17) | 0.06081 (16) | 0.0378 (7) | |
H4A | 0.5027 | 0.6569 | 0.0317 | 0.045* | |
N5 | 0.35367 (19) | 0.46902 (17) | 0.21018 (16) | 0.0357 (6) | |
N6 | 0.2082 (2) | 0.50488 (18) | 0.15204 (17) | 0.0399 (7) | |
H6A | 0.1577 | 0.5350 | 0.1380 | 0.048* | |
N7 | 0.62225 (19) | 0.45068 (17) | 0.29869 (16) | 0.0370 (7) | |
N8 | 0.7795 (2) | 0.4561 (2) | 0.33400 (18) | 0.0455 (8) | |
H8A | 0.8364 | 0.4764 | 0.3434 | 0.055* | |
N9 | 0.4597 (2) | 0.52468 (17) | 0.36472 (17) | 0.0389 (7) | |
N10 | 0.4732 (2) | 0.60837 (17) | 0.45995 (16) | 0.0418 (7) | |
H10A | 0.4973 | 0.6451 | 0.4925 | 0.050* | |
C1 | 0.4544 (2) | 0.7063 (2) | 0.2673 (2) | 0.0377 (8) | |
H1A | 0.4429 | 0.6957 | 0.3159 | 0.045* | |
C2 | 0.4124 (3) | 0.7932 (2) | 0.2440 (3) | 0.0510 (10) | |
H2A | 0.348 (3) | 0.795 (3) | 0.251 (3) | 0.066 (13)* | |
H2B | 0.407 (3) | 0.800 (3) | 0.196 (3) | 0.061 (14)* | |
C3 | 0.4708 (3) | 0.8639 (2) | 0.2853 (3) | 0.0591 (11) | |
H3A | 0.4433 | 0.9174 | 0.2666 | 0.071* | |
H3B | 0.4694 | 0.8605 | 0.3365 | 0.071* | |
C4 | 0.5723 (3) | 0.8592 (2) | 0.2776 (3) | 0.0580 (11) | |
H4B | 0.6082 | 0.9065 | 0.3024 | 0.070* | |
H4C | 0.5739 | 0.8622 | 0.2264 | 0.070* | |
C5 | 0.6177 (3) | 0.7774 (2) | 0.3101 (3) | 0.0535 (10) | |
H5A | 0.6826 | 0.7746 | 0.3037 | 0.064* | |
H5B | 0.6203 | 0.7770 | 0.3620 | 0.064* | |
C6 | 0.5629 (2) | 0.7006 (2) | 0.2751 (2) | 0.0379 (8) | |
H6B | 0.5729 | 0.6976 | 0.2254 | 0.045* | |
C7 | 0.4096 (3) | 0.6477 (2) | 0.1418 (2) | 0.0396 (8) | |
H7A | 0.350 (2) | 0.6305 (19) | 0.1137 (19) | 0.040 (10)* | |
H7B | 0.416 (2) | 0.705 (2) | 0.131 (2) | 0.040 (10)* | |
C8 | 0.4854 (2) | 0.5975 (2) | 0.11997 (19) | 0.0349 (7) | |
C9 | 0.5883 (2) | 0.5004 (2) | 0.1148 (2) | 0.0389 (8) | |
C10 | 0.6475 (3) | 0.4303 (2) | 0.1245 (2) | 0.0509 (10) | |
H10B | 0.6492 | 0.3930 | 0.1628 | 0.061* | |
C11 | 0.7036 (3) | 0.4184 (3) | 0.0751 (2) | 0.0577 (11) | |
H11A | 0.7429 | 0.3714 | 0.0797 | 0.069* | |
C12 | 0.7031 (3) | 0.4747 (3) | 0.0187 (2) | 0.0533 (10) | |
H12A | 0.7443 | 0.4656 | −0.0121 | 0.064* | |
C13 | 0.6443 (3) | 0.5431 (2) | 0.0068 (2) | 0.0466 (9) | |
H13A | 0.6437 | 0.5801 | −0.0316 | 0.056* | |
C14 | 0.5858 (2) | 0.5544 (2) | 0.0551 (2) | 0.0366 (8) | |
C15 | 0.3110 (2) | 0.6161 (2) | 0.2272 (2) | 0.0386 (8) | |
H15A | 0.2659 | 0.6559 | 0.1994 | 0.046* | |
H15B | 0.3071 | 0.6187 | 0.2779 | 0.046* | |
C16 | 0.2893 (2) | 0.5288 (2) | 0.1979 (2) | 0.0369 (8) | |
C17 | 0.3114 (2) | 0.4004 (2) | 0.1689 (2) | 0.0385 (8) | |
C18 | 0.3487 (3) | 0.3210 (2) | 0.1593 (2) | 0.0522 (10) | |
H18A | 0.4093 | 0.3049 | 0.1848 | 0.063* | |
C19 | 0.2916 (3) | 0.2680 (3) | 0.1104 (3) | 0.0653 (12) | |
H19A | 0.3138 | 0.2146 | 0.1028 | 0.078* | |
C20 | 0.2023 (3) | 0.2922 (3) | 0.0723 (3) | 0.0657 (13) | |
H20A | 0.1666 | 0.2550 | 0.0388 | 0.079* | |
C21 | 0.1638 (3) | 0.3692 (3) | 0.0818 (2) | 0.0561 (11) | |
H21A | 0.1030 | 0.3845 | 0.0562 | 0.067* | |
C22 | 0.2201 (2) | 0.4226 (2) | 0.1312 (2) | 0.0427 (9) | |
C23 | 0.6903 (2) | 0.5920 (2) | 0.2965 (2) | 0.0427 (8) | |
H23A | 0.7424 | 0.6207 | 0.3293 | 0.051* | |
H23B | 0.6928 | 0.6053 | 0.2467 | 0.051* | |
C24 | 0.6979 (2) | 0.4993 (2) | 0.3088 (2) | 0.0398 (8) | |
C25 | 0.6562 (3) | 0.3702 (2) | 0.3196 (2) | 0.0391 (8) | |
C26 | 0.6065 (3) | 0.2960 (2) | 0.3245 (2) | 0.0521 (10) | |
H26A | 0.5403 | 0.2936 | 0.3102 | 0.063* | |
C27 | 0.6593 (3) | 0.2266 (3) | 0.3514 (3) | 0.0649 (12) | |
H27A | 0.6284 | 0.1760 | 0.3549 | 0.078* | |
C28 | 0.7582 (4) | 0.2303 (3) | 0.3735 (3) | 0.0711 (14) | |
H28A | 0.7916 | 0.1822 | 0.3923 | 0.085* | |
C29 | 0.8079 (3) | 0.3027 (3) | 0.3685 (3) | 0.0607 (12) | |
H29A | 0.8741 | 0.3045 | 0.3824 | 0.073* | |
C30 | 0.7551 (3) | 0.3730 (2) | 0.3420 (2) | 0.0438 (9) | |
C31 | 0.6018 (2) | 0.6166 (2) | 0.3898 (2) | 0.0409 (8) | |
H31A | 0.6125 | 0.6730 | 0.4096 | 0.049* | |
H31B | 0.6549 | 0.5817 | 0.4140 | 0.049* | |
C32 | 0.5113 (2) | 0.5826 (2) | 0.4044 (2) | 0.0379 (8) | |
C33 | 0.3809 (3) | 0.5110 (2) | 0.3957 (2) | 0.0398 (8) | |
C34 | 0.3042 (3) | 0.4574 (3) | 0.3759 (2) | 0.0539 (10) | |
H34A | 0.2993 | 0.4199 | 0.3374 | 0.065* | |
C35 | 0.2348 (3) | 0.4618 (3) | 0.4160 (3) | 0.0653 (12) | |
H35A | 0.1823 | 0.4261 | 0.4043 | 0.078* | |
C36 | 0.2417 (3) | 0.5179 (3) | 0.4731 (3) | 0.0636 (12) | |
H36A | 0.1923 | 0.5203 | 0.4975 | 0.076* | |
C37 | 0.3185 (3) | 0.5701 (3) | 0.4948 (2) | 0.0542 (10) | |
H37A | 0.3234 | 0.6067 | 0.5340 | 0.065* | |
C38 | 0.3891 (3) | 0.5654 (2) | 0.4551 (2) | 0.0407 (8) | |
Cl1 | 0.55488 (10) | 0.17228 (8) | 0.01931 (8) | 0.0758 (4) | |
O1 | 0.5176 (5) | 0.2430 (3) | 0.0429 (3) | 0.141 (2) | |
O2 | 0.6396 (4) | 0.1476 (4) | 0.0605 (3) | 0.153 (2) | |
O3 | 0.4884 (4) | 0.1073 (3) | 0.0204 (3) | 0.155 (2) | |
O4 | 0.5571 (4) | 0.1862 (3) | −0.0548 (3) | 0.1265 (18) | |
Cl2 | 0.4081 (5) | 0.1971 (4) | 0.4315 (5) | 0.064 (2) | 0.461 (14) |
O5 | 0.3219 (10) | 0.1788 (13) | 0.4499 (11) | 0.124 (7) | 0.461 (14) |
O6 | 0.4447 (13) | 0.1189 (8) | 0.4236 (10) | 0.113 (7) | 0.461 (14) |
O7 | 0.3795 (11) | 0.2458 (9) | 0.3656 (7) | 0.164 (7) | 0.461 (14) |
O8 | 0.4841 (6) | 0.2349 (7) | 0.4747 (8) | 0.107 (6) | 0.461 (14) |
Cl2' | 0.4056 (7) | 0.1978 (6) | 0.4416 (6) | 0.088 (3) | 0.539 (14) |
O5' | 0.3123 (10) | 0.2126 (13) | 0.4188 (11) | 0.132 (6) | 0.539 (14) |
O6' | 0.4301 (11) | 0.1350 (10) | 0.3880 (10) | 0.111 (6) | 0.539 (14) |
O7' | 0.4525 (10) | 0.2711 (7) | 0.4260 (7) | 0.119 (5) | 0.539 (14) |
O8' | 0.4341 (9) | 0.1893 (8) | 0.5185 (5) | 0.132 (5) | 0.539 (14) |
O1S | 0.9648 (3) | 0.5167 (3) | 0.3479 (3) | 0.0902 (12) | |
H1S | 0.9747 | 0.5408 | 0.3956 | 0.135* | |
C1S | 0.9867 (6) | 0.5786 (5) | 0.3004 (5) | 0.137 (3) | |
H1SA | 1.0452 | 0.5637 | 0.2872 | 0.205* | |
H1SB | 0.9942 | 0.6323 | 0.3242 | 0.205* | |
H1SC | 0.9367 | 0.5828 | 0.2570 | 0.205* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Fe1 | 0.0279 (3) | 0.0359 (3) | 0.0307 (3) | 0.00317 (18) | 0.0022 (2) | 0.00087 (19) |
N1 | 0.0307 (14) | 0.0382 (14) | 0.0321 (16) | 0.0003 (11) | 0.0053 (12) | −0.0031 (12) |
N2 | 0.0301 (14) | 0.0376 (14) | 0.0403 (18) | 0.0020 (11) | 0.0034 (13) | 0.0022 (13) |
N3 | 0.0371 (15) | 0.0428 (15) | 0.0354 (18) | 0.0078 (13) | 0.0064 (13) | 0.0030 (13) |
N4 | 0.0402 (16) | 0.0375 (15) | 0.0351 (18) | −0.0002 (12) | 0.0074 (14) | 0.0041 (12) |
N5 | 0.0322 (14) | 0.0384 (14) | 0.0338 (17) | 0.0007 (12) | 0.0023 (13) | −0.0014 (12) |
N6 | 0.0278 (14) | 0.0522 (17) | 0.0384 (19) | 0.0019 (12) | 0.0045 (13) | 0.0007 (14) |
N7 | 0.0332 (15) | 0.0420 (15) | 0.0336 (17) | 0.0058 (12) | 0.0029 (13) | 0.0011 (13) |
N8 | 0.0302 (15) | 0.0588 (18) | 0.046 (2) | 0.0082 (14) | 0.0065 (14) | 0.0031 (15) |
N9 | 0.0390 (16) | 0.0411 (15) | 0.0359 (18) | −0.0031 (13) | 0.0072 (14) | −0.0012 (13) |
N10 | 0.0536 (18) | 0.0399 (15) | 0.0297 (18) | −0.0009 (14) | 0.0050 (15) | −0.0032 (13) |
C1 | 0.0372 (18) | 0.0363 (17) | 0.040 (2) | 0.0013 (14) | 0.0088 (16) | 0.0012 (15) |
C2 | 0.052 (2) | 0.040 (2) | 0.061 (3) | 0.0091 (17) | 0.013 (2) | 0.0029 (19) |
C3 | 0.068 (3) | 0.0371 (19) | 0.077 (3) | 0.0017 (18) | 0.025 (2) | −0.001 (2) |
C4 | 0.064 (3) | 0.040 (2) | 0.074 (3) | −0.0087 (18) | 0.024 (2) | −0.001 (2) |
C5 | 0.050 (2) | 0.043 (2) | 0.066 (3) | −0.0102 (17) | 0.009 (2) | −0.0019 (19) |
C6 | 0.0385 (18) | 0.0369 (17) | 0.037 (2) | 0.0002 (14) | 0.0065 (16) | 0.0009 (15) |
C7 | 0.041 (2) | 0.044 (2) | 0.031 (2) | 0.0080 (16) | 0.0022 (17) | 0.0026 (16) |
C8 | 0.0329 (17) | 0.0390 (17) | 0.0307 (19) | 0.0000 (14) | 0.0029 (15) | −0.0016 (14) |
C9 | 0.0328 (18) | 0.0439 (18) | 0.039 (2) | 0.0017 (14) | 0.0059 (16) | −0.0040 (16) |
C10 | 0.054 (2) | 0.059 (2) | 0.038 (2) | 0.0169 (19) | 0.0064 (19) | 0.0040 (18) |
C11 | 0.053 (2) | 0.072 (3) | 0.047 (3) | 0.023 (2) | 0.009 (2) | −0.007 (2) |
C12 | 0.044 (2) | 0.076 (3) | 0.042 (2) | 0.004 (2) | 0.0161 (19) | −0.013 (2) |
C13 | 0.046 (2) | 0.057 (2) | 0.037 (2) | −0.0071 (18) | 0.0110 (18) | −0.0047 (18) |
C14 | 0.0327 (17) | 0.0410 (18) | 0.034 (2) | −0.0061 (14) | 0.0032 (15) | −0.0052 (15) |
C15 | 0.0314 (17) | 0.0427 (18) | 0.041 (2) | 0.0066 (14) | 0.0066 (16) | −0.0005 (15) |
C16 | 0.0310 (17) | 0.0441 (18) | 0.035 (2) | −0.0021 (14) | 0.0064 (16) | 0.0010 (15) |
C17 | 0.0389 (18) | 0.0442 (18) | 0.032 (2) | −0.0054 (15) | 0.0076 (16) | −0.0009 (15) |
C18 | 0.050 (2) | 0.046 (2) | 0.056 (3) | 0.0009 (18) | 0.004 (2) | −0.0037 (19) |
C19 | 0.074 (3) | 0.049 (2) | 0.072 (3) | −0.006 (2) | 0.012 (3) | −0.015 (2) |
C20 | 0.061 (3) | 0.065 (3) | 0.067 (3) | −0.018 (2) | 0.008 (2) | −0.023 (2) |
C21 | 0.040 (2) | 0.068 (3) | 0.057 (3) | −0.0132 (19) | 0.003 (2) | −0.009 (2) |
C22 | 0.0330 (18) | 0.049 (2) | 0.045 (2) | −0.0049 (15) | 0.0084 (17) | 0.0006 (17) |
C23 | 0.0318 (17) | 0.050 (2) | 0.045 (2) | −0.0024 (15) | 0.0053 (16) | 0.0020 (17) |
C24 | 0.0324 (18) | 0.050 (2) | 0.036 (2) | 0.0072 (15) | 0.0068 (16) | 0.0013 (16) |
C25 | 0.0437 (19) | 0.0438 (18) | 0.030 (2) | 0.0102 (15) | 0.0083 (16) | 0.0006 (15) |
C26 | 0.052 (2) | 0.051 (2) | 0.050 (3) | 0.0073 (18) | 0.006 (2) | 0.0052 (19) |
C27 | 0.076 (3) | 0.049 (2) | 0.067 (3) | 0.009 (2) | 0.013 (3) | 0.014 (2) |
C28 | 0.072 (3) | 0.061 (3) | 0.080 (4) | 0.031 (2) | 0.017 (3) | 0.023 (2) |
C29 | 0.047 (2) | 0.078 (3) | 0.055 (3) | 0.025 (2) | 0.009 (2) | 0.014 (2) |
C30 | 0.042 (2) | 0.056 (2) | 0.034 (2) | 0.0174 (17) | 0.0107 (17) | 0.0063 (17) |
C31 | 0.0411 (19) | 0.0462 (19) | 0.031 (2) | −0.0019 (15) | −0.0010 (16) | −0.0008 (15) |
C32 | 0.0377 (18) | 0.0348 (17) | 0.037 (2) | 0.0020 (14) | 0.0002 (16) | 0.0012 (15) |
C33 | 0.043 (2) | 0.0390 (17) | 0.038 (2) | 0.0014 (15) | 0.0102 (17) | 0.0038 (15) |
C34 | 0.058 (2) | 0.062 (2) | 0.043 (2) | −0.014 (2) | 0.016 (2) | −0.003 (2) |
C35 | 0.061 (3) | 0.080 (3) | 0.058 (3) | −0.020 (2) | 0.020 (2) | 0.002 (2) |
C36 | 0.060 (3) | 0.080 (3) | 0.057 (3) | 0.000 (2) | 0.029 (2) | 0.012 (2) |
C37 | 0.073 (3) | 0.058 (2) | 0.036 (2) | 0.009 (2) | 0.021 (2) | 0.0058 (18) |
C38 | 0.051 (2) | 0.0412 (18) | 0.030 (2) | 0.0043 (16) | 0.0090 (17) | 0.0067 (15) |
Cl1 | 0.0785 (8) | 0.0682 (7) | 0.0822 (10) | 0.0197 (6) | 0.0213 (7) | 0.0329 (6) |
O1 | 0.202 (6) | 0.101 (3) | 0.129 (4) | 0.045 (4) | 0.054 (4) | 0.023 (3) |
O2 | 0.094 (3) | 0.226 (6) | 0.129 (5) | 0.047 (4) | 0.005 (3) | 0.070 (4) |
O3 | 0.178 (5) | 0.140 (4) | 0.133 (5) | −0.067 (4) | 0.004 (4) | 0.063 (4) |
O4 | 0.127 (4) | 0.156 (4) | 0.107 (4) | 0.032 (3) | 0.049 (3) | 0.068 (3) |
Cl2 | 0.032 (3) | 0.045 (3) | 0.104 (6) | −0.0110 (19) | −0.007 (3) | −0.011 (3) |
O5 | 0.092 (12) | 0.167 (17) | 0.130 (16) | −0.052 (10) | 0.058 (11) | −0.013 (10) |
O6 | 0.088 (8) | 0.090 (8) | 0.142 (18) | 0.001 (6) | −0.012 (10) | −0.056 (10) |
O7 | 0.157 (13) | 0.176 (14) | 0.145 (14) | −0.023 (11) | 0.002 (11) | 0.020 (11) |
O8 | 0.077 (6) | 0.082 (7) | 0.130 (13) | −0.008 (5) | −0.044 (7) | −0.048 (8) |
Cl2' | 0.073 (4) | 0.110 (5) | 0.081 (3) | −0.029 (3) | 0.021 (3) | −0.032 (3) |
O5' | 0.071 (7) | 0.172 (16) | 0.143 (16) | 0.004 (8) | 0.006 (8) | −0.025 (11) |
O6' | 0.083 (8) | 0.127 (10) | 0.128 (14) | −0.045 (7) | 0.032 (8) | −0.065 (8) |
O7' | 0.148 (12) | 0.114 (8) | 0.105 (9) | −0.065 (8) | 0.048 (9) | −0.040 (6) |
O8' | 0.141 (10) | 0.160 (10) | 0.084 (7) | 0.031 (8) | 0.005 (6) | 0.006 (6) |
O1S | 0.074 (2) | 0.099 (3) | 0.098 (3) | −0.019 (2) | 0.023 (2) | −0.040 (2) |
C1S | 0.177 (8) | 0.099 (5) | 0.146 (8) | −0.022 (5) | 0.062 (7) | −0.028 (5) |
Fe1—N7 | 2.095 (3) | C13—C14 | 1.384 (5) |
Fe1—N5 | 2.114 (3) | C13—H13A | 0.9300 |
Fe1—N9 | 2.145 (3) | C15—C16 | 1.500 (5) |
Fe1—N3 | 2.156 (3) | C15—H15A | 0.9700 |
Fe1—N1 | 2.324 (3) | C15—H15B | 0.9700 |
Fe1—N2 | 2.326 (3) | C17—C22 | 1.388 (5) |
N1—C15 | 1.479 (4) | C17—C18 | 1.401 (5) |
N1—C7 | 1.488 (4) | C18—C19 | 1.374 (6) |
N1—C1 | 1.489 (4) | C18—H18A | 0.9300 |
N2—C31 | 1.475 (5) | C19—C20 | 1.376 (6) |
N2—C23 | 1.482 (4) | C19—H19A | 0.9300 |
N2—C6 | 1.499 (4) | C20—C21 | 1.372 (6) |
N3—C8 | 1.305 (4) | C20—H20A | 0.9300 |
N3—C9 | 1.390 (4) | C21—C22 | 1.379 (5) |
N4—C8 | 1.344 (4) | C21—H21A | 0.9300 |
N4—C14 | 1.382 (4) | C23—C24 | 1.495 (5) |
N4—H4A | 0.8600 | C23—H23A | 0.9700 |
N5—C16 | 1.312 (4) | C23—H23B | 0.9700 |
N5—C17 | 1.397 (4) | C25—C30 | 1.389 (5) |
N6—C16 | 1.339 (4) | C25—C26 | 1.394 (5) |
N6—C22 | 1.389 (4) | C26—C27 | 1.369 (6) |
N6—H6A | 0.8600 | C26—H26A | 0.9300 |
N7—C24 | 1.314 (5) | C27—C28 | 1.389 (7) |
N7—C25 | 1.396 (4) | C27—H27A | 0.9300 |
N8—C24 | 1.350 (4) | C28—C29 | 1.371 (6) |
N8—C30 | 1.385 (5) | C28—H28A | 0.9300 |
N8—H8A | 0.8600 | C29—C30 | 1.380 (5) |
N9—C32 | 1.305 (4) | C29—H29A | 0.9300 |
N9—C33 | 1.405 (4) | C31—C32 | 1.493 (5) |
N10—C32 | 1.350 (5) | C31—H31A | 0.9700 |
N10—C38 | 1.375 (5) | C31—H31B | 0.9700 |
N10—H10A | 0.8600 | C33—C34 | 1.376 (5) |
C1—C2 | 1.532 (5) | C33—C38 | 1.398 (5) |
C1—C6 | 1.537 (5) | C34—C35 | 1.383 (6) |
C1—H1A | 0.9800 | C34—H34A | 0.9300 |
C2—C3 | 1.510 (6) | C35—C36 | 1.383 (7) |
C2—H2A | 0.97 (5) | C35—H35A | 0.9300 |
C2—H2B | 0.90 (5) | C36—C37 | 1.369 (6) |
C3—C4 | 1.503 (6) | C36—H36A | 0.9300 |
C3—H3A | 0.9700 | C37—C38 | 1.394 (5) |
C3—H3B | 0.9700 | C37—H37A | 0.9300 |
C4—C5 | 1.521 (6) | Cl1—O2 | 1.346 (5) |
C4—H4B | 0.9700 | Cl1—O1 | 1.364 (5) |
C4—H4C | 0.9700 | Cl1—O3 | 1.413 (5) |
C5—C6 | 1.521 (5) | Cl1—O4 | 1.421 (5) |
C5—H5A | 0.9700 | Cl2—O8 | 1.347 (8) |
C5—H5B | 0.9700 | Cl2—O6 | 1.373 (9) |
C6—H6B | 0.9800 | Cl2—O5 | 1.392 (9) |
C7—C8 | 1.483 (5) | Cl2—O7 | 1.441 (9) |
C7—H7A | 0.94 (3) | Cl2'—O5' | 1.333 (15) |
C7—H7B | 0.94 (4) | Cl2'—O7' | 1.411 (12) |
C9—C10 | 1.390 (5) | Cl2'—O8' | 1.418 (14) |
C9—C14 | 1.409 (5) | Cl2'—O6' | 1.517 (15) |
C10—C11 | 1.375 (6) | O1S—C1S | 1.414 (8) |
C10—H10B | 0.9300 | O1S—H1S | 0.9556 |
C11—C12 | 1.389 (6) | C1S—H1SA | 0.9600 |
C11—H11A | 0.9300 | C1S—H1SB | 0.9600 |
C12—C13 | 1.365 (6) | C1S—H1SC | 0.9600 |
C12—H12A | 0.9300 | ||
N7—Fe1—N5 | 132.58 (11) | C14—C13—H13A | 121.8 |
N7—Fe1—N9 | 94.65 (11) | N4—C14—C13 | 132.6 (3) |
N5—Fe1—N9 | 93.02 (11) | N4—C14—C9 | 104.9 (3) |
N7—Fe1—N3 | 91.46 (11) | C13—C14—C9 | 122.4 (3) |
N5—Fe1—N3 | 90.87 (11) | N1—C15—C16 | 106.5 (3) |
N9—Fe1—N3 | 167.46 (11) | N1—C15—H15A | 110.4 |
N7—Fe1—N1 | 149.54 (10) | C16—C15—H15A | 110.4 |
N5—Fe1—N1 | 76.80 (10) | N1—C15—H15B | 110.4 |
N9—Fe1—N1 | 90.85 (10) | C16—C15—H15B | 110.4 |
N3—Fe1—N1 | 78.43 (10) | H15A—C15—H15B | 108.6 |
N7—Fe1—N2 | 75.51 (10) | N5—C16—N6 | 112.6 (3) |
N5—Fe1—N2 | 151.68 (10) | N5—C16—C15 | 121.8 (3) |
N9—Fe1—N2 | 79.05 (11) | N6—C16—C15 | 125.3 (3) |
N3—Fe1—N2 | 91.94 (11) | C22—C17—N5 | 109.1 (3) |
N1—Fe1—N2 | 76.19 (10) | C22—C17—C18 | 120.7 (3) |
C15—N1—C7 | 109.7 (3) | N5—C17—C18 | 130.2 (3) |
C15—N1—C1 | 113.7 (3) | C19—C18—C17 | 116.8 (4) |
C7—N1—C1 | 113.1 (3) | C19—C18—H18A | 121.6 |
C15—N1—Fe1 | 103.09 (19) | C17—C18—H18A | 121.6 |
C7—N1—Fe1 | 107.84 (19) | C18—C19—C20 | 121.4 (4) |
C1—N1—Fe1 | 108.79 (19) | C18—C19—H19A | 119.3 |
C31—N2—C23 | 110.2 (3) | C20—C19—H19A | 119.3 |
C31—N2—C6 | 113.8 (3) | C21—C20—C19 | 122.6 (4) |
C23—N2—C6 | 112.9 (3) | C21—C20—H20A | 118.7 |
C31—N2—Fe1 | 106.03 (19) | C19—C20—H20A | 118.7 |
C23—N2—Fe1 | 104.2 (2) | C20—C21—C22 | 116.4 (4) |
C6—N2—Fe1 | 109.06 (19) | C20—C21—H21A | 121.8 |
C8—N3—C9 | 106.4 (3) | C22—C21—H21A | 121.8 |
C8—N3—Fe1 | 113.6 (2) | C21—C22—C17 | 122.0 (4) |
C9—N3—Fe1 | 138.6 (2) | C21—C22—N6 | 132.9 (4) |
C8—N4—C14 | 107.9 (3) | C17—C22—N6 | 105.0 (3) |
C8—N4—H4A | 126.1 | N2—C23—C24 | 107.0 (3) |
C14—N4—H4A | 126.1 | N2—C23—H23A | 110.3 |
C16—N5—C17 | 105.6 (3) | C24—C23—H23A | 110.3 |
C16—N5—Fe1 | 113.3 (2) | N2—C23—H23B | 110.3 |
C17—N5—Fe1 | 138.4 (2) | C24—C23—H23B | 110.3 |
C16—N6—C22 | 107.7 (3) | H23A—C23—H23B | 108.6 |
C16—N6—H6A | 126.1 | N7—C24—N8 | 112.2 (3) |
C22—N6—H6A | 126.1 | N7—C24—C23 | 122.0 (3) |
C24—N7—C25 | 105.9 (3) | N8—C24—C23 | 125.8 (3) |
C24—N7—Fe1 | 114.7 (2) | C30—C25—C26 | 120.8 (3) |
C25—N7—Fe1 | 139.3 (2) | C30—C25—N7 | 108.9 (3) |
C24—N8—C30 | 107.6 (3) | C26—C25—N7 | 130.1 (3) |
C24—N8—H8A | 126.2 | C27—C26—C25 | 117.2 (4) |
C30—N8—H8A | 126.2 | C27—C26—H26A | 121.4 |
C32—N9—C33 | 106.2 (3) | C25—C26—H26A | 121.4 |
C32—N9—Fe1 | 112.1 (2) | C26—C27—C28 | 121.4 (4) |
C33—N9—Fe1 | 137.3 (3) | C26—C27—H27A | 119.3 |
C32—N10—C38 | 107.7 (3) | C28—C27—H27A | 119.3 |
C32—N10—H10A | 126.2 | C29—C28—C27 | 121.9 (4) |
C38—N10—H10A | 126.2 | C29—C28—H28A | 119.1 |
N1—C1—C2 | 114.9 (3) | C27—C28—H28A | 119.1 |
N1—C1—C6 | 108.1 (3) | C28—C29—C30 | 117.0 (4) |
C2—C1—C6 | 113.9 (3) | C28—C29—H29A | 121.5 |
N1—C1—H1A | 106.5 | C30—C29—H29A | 121.5 |
C2—C1—H1A | 106.5 | C29—C30—N8 | 132.9 (4) |
C6—C1—H1A | 106.5 | C29—C30—C25 | 121.7 (4) |
C3—C2—C1 | 112.9 (4) | N8—C30—C25 | 105.4 (3) |
C3—C2—H2A | 110 (3) | N2—C31—C32 | 110.9 (3) |
C1—C2—H2A | 108 (3) | N2—C31—H31A | 109.5 |
C3—C2—H2B | 110 (3) | C32—C31—H31A | 109.5 |
C1—C2—H2B | 110 (3) | N2—C31—H31B | 109.5 |
H2A—C2—H2B | 105 (4) | C32—C31—H31B | 109.5 |
C4—C3—C2 | 110.6 (3) | H31A—C31—H31B | 108.0 |
C4—C3—H3A | 109.5 | N9—C32—N10 | 112.4 (3) |
C2—C3—H3A | 109.5 | N9—C32—C31 | 123.8 (3) |
C4—C3—H3B | 109.5 | N10—C32—C31 | 123.9 (3) |
C2—C3—H3B | 109.5 | C34—C33—C38 | 121.1 (3) |
H3A—C3—H3B | 108.1 | C34—C33—N9 | 131.1 (3) |
C3—C4—C5 | 109.9 (3) | C38—C33—N9 | 107.8 (3) |
C3—C4—H4B | 109.7 | C33—C34—C35 | 117.1 (4) |
C5—C4—H4B | 109.7 | C33—C34—H34A | 121.4 |
C3—C4—H4C | 109.7 | C35—C34—H34A | 121.4 |
C5—C4—H4C | 109.7 | C36—C35—C34 | 121.5 (4) |
H4B—C4—H4C | 108.2 | C36—C35—H35A | 119.2 |
C6—C5—C4 | 112.4 (3) | C34—C35—H35A | 119.2 |
C6—C5—H5A | 109.1 | C37—C36—C35 | 122.3 (4) |
C4—C5—H5A | 109.1 | C37—C36—H36A | 118.9 |
C6—C5—H5B | 109.1 | C35—C36—H36A | 118.9 |
C4—C5—H5B | 109.1 | C36—C37—C38 | 116.4 (4) |
H5A—C5—H5B | 107.8 | C36—C37—H37A | 121.8 |
N2—C6—C5 | 114.8 (3) | C38—C37—H37A | 121.8 |
N2—C6—C1 | 108.7 (3) | N10—C38—C37 | 132.5 (4) |
C5—C6—C1 | 114.2 (3) | N10—C38—C33 | 105.9 (3) |
N2—C6—H6B | 106.2 | C37—C38—C33 | 121.5 (4) |
C5—C6—H6B | 106.2 | O2—Cl1—O1 | 115.1 (4) |
C1—C6—H6B | 106.2 | O2—Cl1—O3 | 107.8 (4) |
C8—C7—N1 | 112.0 (3) | O1—Cl1—O3 | 106.4 (4) |
C8—C7—H7A | 109 (2) | O2—Cl1—O4 | 113.0 (3) |
N1—C7—H7A | 108 (2) | O1—Cl1—O4 | 106.9 (3) |
C8—C7—H7B | 110 (2) | O3—Cl1—O4 | 107.2 (3) |
N1—C7—H7B | 111 (2) | O8—Cl2—O6 | 101.0 (9) |
H7A—C7—H7B | 107 (3) | O8—Cl2—O5 | 126.2 (13) |
N3—C8—N4 | 112.5 (3) | O6—Cl2—O5 | 102.8 (11) |
N3—C8—C7 | 124.4 (3) | O8—Cl2—O7 | 108.3 (8) |
N4—C8—C7 | 123.1 (3) | O6—Cl2—O7 | 115.9 (11) |
C10—C9—N3 | 131.8 (4) | O5—Cl2—O7 | 103.3 (8) |
C10—C9—C14 | 119.8 (3) | O5'—Cl2'—O7' | 106.4 (14) |
N3—C9—C14 | 108.4 (3) | O5'—Cl2'—O8' | 112.4 (12) |
C11—C10—C9 | 117.3 (4) | O7'—Cl2'—O8' | 104.5 (11) |
C11—C10—H10B | 121.3 | O5'—Cl2'—O6' | 105.8 (12) |
C9—C10—H10B | 121.3 | O7'—Cl2'—O6' | 102.2 (10) |
C10—C11—C12 | 121.7 (4) | O8'—Cl2'—O6' | 123.9 (11) |
C10—C11—H11A | 119.1 | C1S—O1S—H1S | 107.9 |
C12—C11—H11A | 119.1 | O1S—C1S—H1SA | 109.1 |
C13—C12—C11 | 122.3 (4) | O1S—C1S—H1SB | 110.0 |
C13—C12—H12A | 118.8 | H1SA—C1S—H1SB | 109.2 |
C11—C12—H12A | 118.8 | O1S—C1S—H1SC | 110.7 |
C12—C13—C14 | 116.3 (4) | H1SA—C1S—H1SC | 109.2 |
C12—C13—H13A | 121.8 | H1SB—C1S—H1SC | 108.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···O1i | 0.86 | 2.10 | 2.952 (6) | 171 |
N6—H6A···O6′ii | 0.86 | 2.02 | 2.852 (15) | 162 |
N6—H6A···O6ii | 0.86 | 2.13 | 2.955 (16) | 162 |
N8—H8A···O1S | 0.86 | 1.94 | 2.790 (5) | 170 |
N10—H10A···O7′iii | 0.86 | 2.04 | 2.896 (10) | 176 |
N10—H10A···O8iii | 0.86 | 2.01 | 2.787 (12) | 150 |
O1S—H1S···O3iv | 0.96 | 1.88 | 2.813 (6) | 166 |
C7—H7B···O4i | 0.94 (4) | 2.34 (4) | 3.202 (6) | 152 (3) |
C23—H23A···O2iv | 0.97 | 2.40 | 3.318 (6) | 158 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1, −y+1, −z+1; (iv) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Fe(C38H38N10)](ClO4)2·CH4O |
Mr | 921.58 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 14.3867 (6), 15.9145 (6), 18.8218 (8) |
β (°) | 103.175 (1) |
V (Å3) | 4196.0 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.55 |
Crystal size (mm) | 0.30 × 0.16 × 0.10 |
Data collection | |
Diffractometer | Bruker APEX CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21311, 7369, 5765 |
Rint | 0.083 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.176, 1.07 |
No. of reflections | 7369 |
No. of parameters | 612 |
No. of restraints | 10 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.57, −0.53 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···O1i | 0.86 | 2.10 | 2.952 (6) | 171 |
N6—H6A···O6'ii | 0.86 | 2.02 | 2.852 (15) | 162 |
N6—H6A···O6ii | 0.86 | 2.13 | 2.955 (16) | 162 |
N8—H8A···O1S | 0.86 | 1.94 | 2.790 (5) | 170 |
N10—H10A···O7'iii | 0.86 | 2.04 | 2.896 (10) | 176 |
N10—H10A···O8iii | 0.86 | 2.01 | 2.787 (12) | 150 |
O1S—H1S···O3iv | 0.96 | 1.88 | 2.813 (6) | 166 |
C7—H7B···O4i | 0.94 (4) | 2.34 (4) | 3.202 (6) | 152 (3) |
C23—H23A···O2iv | 0.97 | 2.40 | 3.318 (6) | 158 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1, −y+1, −z+1; (iv) −x+3/2, y+1/2, −z+1/2. |
Acknowledgements
We thank the Youth Chen-Guang Project of Wuhan (grant No. 200850731361) for financially support of this study.
References
Bruker (2007). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Hendriks, M. J., Birker, J. M. W. L., van Rijn, J., Verschoor, G. C. & Reedijk, J. (1982). J. Am. Chem. Soc. 104, 3607–3617. CSD CrossRef CAS Web of Science Google Scholar
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Mei, F.-S., Ou, C.-P., Wu, G.-L., Cao, L., Han, F., Meng, X.-G., Li, J., Li, D.-F. & Liao, Z.-R. (2010). Dalton Trans. pp. 4267–4269. CrossRef Google Scholar
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N,N,N',N'-Tetrakis(2-benzimidazolymethyl) cyclohexane-1,2-trans-diamine (ctb) is a benzimidazole-rich ligand, which has the advantage that the basicity of the coordinating group approximates that of histidine (histidine: pKb = 7.96; benzimidazole: pKb = 8.47; Main, 1992). The metal iron(III) and iron(II) can ligated by the ctb ligand, modeling the activities of lipoxygenase (Mei et al., 2010; Zhao et al., 2005). In a continuation of this work, herein we report the synthesis and structure of the title complex.
In the title compound, the FeII atom has a distorted octahedral coordination environment with four benzimidazol (bzim) N atoms and two amino N atoms from a ctb ligand (Fig. 1). The two trans-tertiary amine N atoms are significantly farther away from the FeII atom than the four bzim N atoms [average Fe—Namine = 2.325 (3), Fe—Nbzim = 2.128 (3) Å]. As shown in Fig. 2, The uncoordinated solvent methanol molecule is hydrogen bonded to an O atom of a perchlorate anion. N—H···O and C—H···O hydrogen bonds, as well as π–π stacking interactions between the imidazol rings and between the imidazol and benzene rings [centroid–centroid distances = 3.714 (2) and 3.705 (2) Å] give rise to a three-dimensional network.