organic compounds
1,4-Bis(5-methyl-1H-1,2,4-triazol-3-yl)benzene tetrahydrate
aFaculty of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming 650092, People's Republic of China, and bDepartment of Chemistry, Zhengzhou Normal University, Zhengzhou 450044, People's Republic of China
*Correspondence e-mail: zaxchem@126.com
In the title compound, C12H12N6·4H2O, the two triazole rings adopt a cis configuration with a crystallographic twofold axis passing through the central benzene group. The benzene and triazole rings are almost coplanar with a dihedral angle of 5.5 (1)°. In the crystal, water molecules are joined together by OW—H⋯OW hydrogen bonds to form a one-dimensional zigzag chain. These water chains are further connected to the organic molecule, forming a three-dimensional network by intermolecular OW—H⋯N and N—H⋯OW hydrogen bonds. Moreover, π–π stacking interactions between triazole rings [centroid–centroid distances = 3.667 (1)–3.731 (1) Å] are observed. One of the water molecules shows one of the H atoms to be disordered over two positions.
Related literature
For applications of 1,2,4-triazole and its derivatives in coordination chemistry, see: Zhang et al. (2005); Ouellette et al. (2006); Zhu et al. (2009). For the structures of ruthenium complexes with pyridine-2-yl-1,2,4-triazole-based ligands, see: Passaniti et al. (2002). For the previous synthesis of the title compound, see: Bahçeci et al. (2005).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
10.1107/S1600536811015133/im2280sup1.cif
contains datablocks I, global. DOI:Supporting information file. DOI: 10.1107/S1600536811015133/im2280Isup2.cdx
Structure factors: contains datablock I. DOI: 10.1107/S1600536811015133/im2280Isup3.hkl
Supporting information file. DOI: 10.1107/S1600536811015133/im2280Isup4.cml
The ligand 1,4-bis(5-methyl-1H-1,2,4-triazol-3-yl)benzene was synthesized according to a literature method (Bahçeci et al. 2005). Yellow, plate-like single crystals of the title compound are obtained from a solution of 1,4-bis(5-methyl-1H-1,2,4-triazol-3-yl)benzene (24 mg, 0.1 mmol) in methanol (1 ml) and water (5 ml) if the solution is placed in a Teflon-lined stainless steel vessel (15 ml), heated at 453 K for 24 h and then cooled to room temperature at a rate of 5 K h-1.
All H atoms were placed in idealized positions (O—H = 0.85 Å, N—H = 0.86 Å and C—H = 0.95 Å) and refined as riding atoms with Uiso(H) = 1.2Ueq(C, N) and Uiso(H) = 1.5Ueq(O). One hydrogen atom from O2W is disordered over two positions in a 0.52 (3):0.48 (3) ratio, which is freely refined with the command 'PART'.
Data collection: SMART (Bruker, 2004); cell
SMART [SAINT?] (Bruker, 2004); data reduction: SMART [SAINT?] (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound, non-H atoms are depicted as 30% probability displacement ellipsoids. | |
Fig. 2. Packing diagram of the title compound showing the hydrogen bonding interactions as dashed lines. H atoms not involved in hydrogen bondings have been omitted. | |
Fig. 3. π-π Stacking interactions between triazole rings, H and O atoms are omitted for clarity. |
C12H12N6·4H2O | Z = 4 |
Mr = 312.34 | F(000) = 664 |
Monoclinic, C2/c | Dx = 1.313 Mg m−3 |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 12.7343 (19) Å | µ = 0.10 mm−1 |
b = 13.937 (2) Å | T = 293 K |
c = 9.0648 (14) Å | Plate, yellow |
β = 100.893 (3)° | 0.35 × 0.28 × 0.08 mm |
V = 1579.8 (4) Å3 |
Bruker APEX CCD diffractometer | 1542 independent reflections |
Radiation source: fine-focus sealed tube | 1286 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ω scans | θmax = 26.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −15→15 |
Tmin = 0.966, Tmax = 0.992 | k = −15→17 |
4670 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.148 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0816P)2 + 0.7602P] where P = (Fo2 + 2Fc2)/3 |
1542 reflections | (Δ/σ)max < 0.001 |
102 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C12H12N6·4H2O | V = 1579.8 (4) Å3 |
Mr = 312.34 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 12.7343 (19) Å | µ = 0.10 mm−1 |
b = 13.937 (2) Å | T = 293 K |
c = 9.0648 (14) Å | 0.35 × 0.28 × 0.08 mm |
β = 100.893 (3)° |
Bruker APEX CCD diffractometer | 1542 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1286 reflections with I > 2σ(I) |
Tmin = 0.966, Tmax = 0.992 | Rint = 0.021 |
4670 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.148 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.27 e Å−3 |
1542 reflections | Δρmin = −0.25 e Å−3 |
102 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. One hydrogen atom from O2W is disordered over two positions in a 0.52 (3):0.48 (3) ratio, which is freely refined with command 'PART'. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
N1 | 0.66106 (13) | 0.34969 (11) | −0.19565 (17) | 0.0531 (5) | |
H1D | 0.6874 | 0.3847 | −0.2578 | 0.064* | |
N2 | 0.62354 (14) | 0.38395 (11) | −0.07499 (17) | 0.0522 (5) | |
N3 | 0.60877 (12) | 0.22386 (10) | −0.09140 (16) | 0.0454 (4) | |
C1 | 0.68428 (18) | 0.19667 (15) | −0.3248 (2) | 0.0590 (6) | |
H1A | 0.7292 | 0.1449 | −0.2805 | 0.088* | |
H1B | 0.7230 | 0.2361 | −0.3830 | 0.088* | |
H1C | 0.6218 | 0.1711 | −0.3887 | 0.088* | |
C2 | 0.65166 (14) | 0.25529 (13) | −0.20444 (18) | 0.0448 (4) | |
C3 | 0.59264 (14) | 0.30486 (12) | −0.01538 (19) | 0.0425 (4) | |
C4 | 0.54472 (14) | 0.30544 (12) | 0.12072 (19) | 0.0421 (4) | |
C5 | 0.52248 (17) | 0.22014 (13) | 0.1863 (2) | 0.0510 (5) | |
H5A | 0.5379 | 0.1622 | 0.1443 | 0.061* | |
C6 | 0.52170 (16) | 0.39108 (13) | 0.1860 (2) | 0.0510 (5) | |
H6A | 0.5358 | 0.4491 | 0.1429 | 0.061* | |
O1W | 0.73472 (14) | 0.45314 (11) | −0.41166 (19) | 0.0757 (5) | |
H1WA | 0.6969 | 0.4969 | −0.4609 | 0.091* | |
H1WB | 0.8001 | 0.4691 | −0.4017 | 0.091* | |
O2W | 0.44076 (12) | −0.02791 (9) | 0.10493 (16) | 0.0602 (4) | |
H2WA | 0.4240 | −0.0868 | 0.0928 | 0.072* | |
H2WB | 0.4790 | −0.0006 | 0.0500 | 0.072* | 0.52 (3) |
H2WC | 0.4784 | −0.0277 | 0.1930 | 0.072* | 0.48 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0657 (11) | 0.0516 (10) | 0.0484 (8) | −0.0032 (8) | 0.0274 (8) | 0.0074 (7) |
N2 | 0.0662 (11) | 0.0437 (9) | 0.0523 (9) | −0.0025 (7) | 0.0257 (8) | 0.0035 (7) |
N3 | 0.0540 (9) | 0.0428 (8) | 0.0425 (8) | −0.0035 (7) | 0.0166 (7) | −0.0015 (6) |
C1 | 0.0649 (13) | 0.0672 (13) | 0.0495 (10) | −0.0045 (10) | 0.0232 (9) | −0.0060 (9) |
C2 | 0.0467 (10) | 0.0488 (10) | 0.0401 (9) | −0.0022 (8) | 0.0115 (7) | 0.0016 (7) |
C3 | 0.0452 (10) | 0.0437 (9) | 0.0397 (9) | −0.0003 (7) | 0.0108 (7) | 0.0012 (7) |
C4 | 0.0448 (10) | 0.0431 (10) | 0.0396 (9) | −0.0001 (7) | 0.0109 (7) | 0.0010 (7) |
C5 | 0.0774 (14) | 0.0368 (9) | 0.0429 (9) | 0.0004 (9) | 0.0218 (9) | −0.0027 (7) |
C6 | 0.0603 (12) | 0.0380 (10) | 0.0604 (11) | −0.0004 (8) | 0.0260 (9) | 0.0049 (8) |
O1W | 0.0804 (11) | 0.0679 (10) | 0.0871 (11) | 0.0058 (8) | 0.0373 (9) | 0.0277 (8) |
O2W | 0.0809 (11) | 0.0447 (7) | 0.0611 (9) | −0.0064 (7) | 0.0289 (8) | −0.0014 (6) |
N1—C2 | 1.322 (3) | C4—C5 | 1.382 (2) |
N1—N2 | 1.360 (2) | C4—C6 | 1.388 (2) |
N1—H1D | 0.8600 | C5—C5i | 1.383 (4) |
N2—C3 | 1.320 (2) | C5—H5A | 0.9300 |
N3—C2 | 1.324 (2) | C6—C6i | 1.376 (4) |
N3—C3 | 1.358 (2) | C6—H6A | 0.9300 |
C1—C2 | 1.484 (3) | O1W—H1WA | 0.8500 |
C1—H1A | 0.9600 | O1W—H1WB | 0.8500 |
C1—H1B | 0.9600 | O2W—H2WA | 0.8500 |
C1—H1C | 0.9600 | O2W—H2WB | 0.8501 |
C3—C4 | 1.476 (2) | O2W—H2WC | 0.8499 |
C2—N1—N2 | 110.87 (14) | N2—C3—C4 | 122.67 (15) |
C2—N1—H1D | 124.6 | N3—C3—C4 | 123.69 (15) |
N2—N1—H1D | 124.6 | C5—C4—C6 | 118.63 (17) |
C3—N2—N1 | 102.31 (15) | C5—C4—C3 | 120.35 (15) |
C2—N3—C3 | 104.00 (15) | C6—C4—C3 | 121.01 (15) |
C2—C1—H1A | 109.5 | C4—C5—C5i | 120.67 (10) |
C2—C1—H1B | 109.5 | C4—C5—H5A | 119.7 |
H1A—C1—H1B | 109.5 | C5i—C5—H5A | 119.7 |
C2—C1—H1C | 109.5 | C6i—C6—C4 | 120.69 (10) |
H1A—C1—H1C | 109.5 | C6i—C6—H6A | 119.7 |
H1B—C1—H1C | 109.5 | C4—C6—H6A | 119.7 |
N1—C2—N3 | 109.18 (15) | H1WA—O1W—H1WB | 108.3 |
N1—C2—C1 | 123.88 (16) | H2WA—O2W—H2WB | 121.0 |
N3—C2—C1 | 126.93 (17) | H2WA—O2W—H2WC | 102.0 |
N2—C3—N3 | 113.64 (16) | H2WB—O2W—H2WC | 105.4 |
Symmetry code: (i) −x+1, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1D···O1W | 0.86 | 1.88 | 2.736 (2) | 173 |
O1W—H1WA···N2ii | 0.85 | 2.08 | 2.926 (2) | 172 |
O1W—H1WB···O2Wiii | 0.85 | 1.96 | 2.801 (2) | 170 |
O2W—H2WA···N3iv | 0.85 | 1.95 | 2.800 (2) | 173 |
O2W—H2WB···O2Wiv | 0.85 | 1.93 | 2.754 (3) | 164 |
O2W—H2WC···O2Wi | 0.85 | 1.92 | 2.774 (3) | 178 |
Symmetry codes: (i) −x+1, y, −z+1/2; (ii) x, −y+1, z−1/2; (iii) x+1/2, −y+1/2, z−1/2; (iv) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C12H12N6·4H2O |
Mr | 312.34 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 12.7343 (19), 13.937 (2), 9.0648 (14) |
β (°) | 100.893 (3) |
V (Å3) | 1579.8 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.35 × 0.28 × 0.08 |
Data collection | |
Diffractometer | Bruker APEX CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.966, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4670, 1542, 1286 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.148, 1.04 |
No. of reflections | 1542 |
No. of parameters | 102 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.25 |
Computer programs: SMART (Bruker, 2004), SMART [SAINT?] (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 1999), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1D···O1W | 0.86 | 1.88 | 2.736 (2) | 173.3 |
O1W—H1WA···N2i | 0.85 | 2.08 | 2.926 (2) | 171.9 |
O1W—H1WB···O2Wii | 0.85 | 1.96 | 2.801 (2) | 169.6 |
O2W—H2WA···N3iii | 0.85 | 1.95 | 2.800 (2) | 173.0 |
O2W—H2WB···O2Wiii | 0.85 | 1.93 | 2.754 (3) | 163.9 |
O2W—H2WC···O2Wiv | 0.85 | 1.92 | 2.774 (3) | 178.1 |
Symmetry codes: (i) x, −y+1, z−1/2; (ii) x+1/2, −y+1/2, z−1/2; (iii) −x+1, −y, −z; (iv) −x+1, y, −z+1/2. |
Acknowledgements
The authors thank the Youth Foundation (grant No. 10QZ02) of Yunnan Normal University, the Science Foundation of the Education Department (grant No. 2010Y004) as well as the Science and Technology Department (grant No. 2010ZC070) of Yunnan Province for supporting this work.
References
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In the past few years, 1,2,4-triazole and its derivatives have attracted increasing attention as N-heterocyclic aromatic ligands, since they are effective bridging ligands combining the coordination modes of both imidazoles and pyrazoles. In addition, metal-triazolate frameworks have demonstrated high thermal and chemical stabilities, and interesting luminescent, magnetic and gas-adsorption properties (Zhang et al. 2005; Ouellette et al. 2006; Zhu et al. 2009). However, there are rare crystal structure reports of 1,2,4-triazole derivatives attached to aromatic groups (Passaniti et al. 2002). Although the synthesis of the title compound 1,4-bis(5-methyl-1H-1,2,4-triazol-3-yl)benzene has been reported by Bahçeci et al. (2005), no crystallographic study has been reported on this ligand and related metal coordination compounds. We reported herein another synthetic method and the crystal structure of the title compound.
The asymmetric unit of the title compound contains one-half organic molecule, which adopts a cis-configuration with a crystallographic mirror plane passing through the central benzene group, and two water molecules (Fig. 1). The bond lengths and angles are within normal ranges in accordance with the corresponding values reported (Passaniti et al. 2002). The benzene and the triazole rings are almost coplanar, with a dihedral angle of 5.4 (1)°. In the crystal structure, water molecules are joined together by OW—H···OW hydrogen bonds to form a one-dimensional zig-zag water chain (Fig. 2, Table 1). These water chains are further connected to the organic molecule producing a three-dimensional network (Fig. 2) by intermolecular OW—H···N and N—H···OW hydrogen bonds (Table 1). Moreover, π-π stacking interactions between triazole rings (centroid-centroid distance = 3.665 (1)–3.732 (1) Å) are observed (Fig. 3).