organic compounds
Dimethylammonium 2-[(2-oxo-2H-chromen-7-yl)oxy]acetate
aState Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, People's Republic of China
*Correspondence e-mail: dongfx@jlu.edu.cn
In the title salt, C2H8N+·C11H7O5−, the acetate group is twisted out of the plane of the coumarin ring system with a C—O—C—C torsion angle of 76.3 (2)°. In the crystal, N—H⋯O hydrogen bonds link the cations and anions into chains propagating in [100].
Experimental
Crystal data
|
Refinement
|
Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811012761/ng5144sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811012761/ng5144Isup2.hkl
A mixture of 7-hydroxycoumarin (0.16 g, 1.0 mmol), potassium carbonate (0.20 g, 1.4 mmol), ethyl bromoacetate (0.20 g, 1.2 mmol), and dry acetone (30 ml) was refluxed for 4 h while stirring in a N2 atmosphere. After removal of salt by filtration, the resulting ester was recrystallized from ethanol. After then, the carboxylic acid derivatives was obtained through refluxing in sodium hydroxide solution and protonized with HCl. Mix the obtained carboxylic acid derivatives with dimethylamine with molar ratio of 1:1 in methanol, needle-like crystals of title compound were obtained after several days.
The reflection data (2 3 2) had been omit in the
H atoms bound to C atoms were placed in calculated positions and treated as riding on their parent atoms, with C—H = 0.93 Å (aromatic C), C—H = 0.97Å (methylene C), and with Uiso(H) = 1.2Ueq(C) or C—H = 0.96 Å (methly C) and with Uiso(H) = 1.5Ueq(C). The N-bound H atoms were initially located in a difference Fourier map and they were refined with N—H=0.90 Å.Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C2H8N+·C11H7O5− | Z = 2 |
Mr = 265.26 | F(000) = 280 |
Triclinic, P1 | Dx = 1.389 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.714 (5) Å | Cell parameters from 4269 reflections |
b = 8.146 (7) Å | θ = 3.1–27.5° |
c = 12.767 (12) Å | µ = 0.11 mm−1 |
α = 83.33 (4)° | T = 293 K |
β = 79.16 (3)° | Block, colorless |
γ = 67.78 (3)° | 0.44 × 0.22 × 0.14 mm |
V = 634.1 (9) Å3 |
Rigaku R-AXIS RAPID diffractometer | 2881 independent reflections |
Radiation source: fine-focus sealed tube | 1878 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −8→8 |
Tmin = 0.955, Tmax = 0.986 | k = −10→10 |
6310 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.131 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.93 | w = 1/[σ2(Fo2) + (0.0824P)2 + 0.0078P] where P = (Fo2 + 2Fc2)/3 |
2881 reflections | (Δ/σ)max < 0.001 |
182 parameters | Δρmax = 0.17 e Å−3 |
2 restraints | Δρmin = −0.16 e Å−3 |
C2H8N+·C11H7O5− | γ = 67.78 (3)° |
Mr = 265.26 | V = 634.1 (9) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.714 (5) Å | Mo Kα radiation |
b = 8.146 (7) Å | µ = 0.11 mm−1 |
c = 12.767 (12) Å | T = 293 K |
α = 83.33 (4)° | 0.44 × 0.22 × 0.14 mm |
β = 79.16 (3)° |
Rigaku R-AXIS RAPID diffractometer | 2881 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1878 reflections with I > 2σ(I) |
Tmin = 0.955, Tmax = 0.986 | Rint = 0.026 |
6310 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 2 restraints |
wR(F2) = 0.131 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.93 | Δρmax = 0.17 e Å−3 |
2881 reflections | Δρmin = −0.16 e Å−3 |
182 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.1702 (2) | 0.71671 (17) | 0.56112 (12) | 0.0410 (3) | |
C1 | 0.4408 (3) | 0.6603 (2) | 1.12637 (14) | 0.0474 (4) | |
C2 | 0.2575 (3) | 0.6054 (3) | 1.16133 (14) | 0.0509 (4) | |
H2 | 0.2490 | 0.5412 | 1.2261 | 0.061* | |
C3 | 0.0990 (3) | 0.6456 (2) | 1.10186 (14) | 0.0492 (4) | |
H3 | −0.0200 | 0.6120 | 1.1270 | 0.059* | |
C4 | 0.1103 (2) | 0.7390 (2) | 1.00064 (12) | 0.0390 (4) | |
C5 | −0.0479 (2) | 0.7886 (2) | 0.93318 (14) | 0.0469 (4) | |
H5 | −0.1734 | 0.7628 | 0.9553 | 0.056* | |
C6 | −0.0222 (2) | 0.8737 (2) | 0.83609 (13) | 0.0441 (4) | |
H6 | −0.1294 | 0.9053 | 0.7929 | 0.053* | |
C7 | 0.1668 (2) | 0.9134 (2) | 0.80145 (12) | 0.0352 (3) | |
C8 | 0.3255 (2) | 0.8682 (2) | 0.86578 (12) | 0.0377 (4) | |
H8 | 0.4510 | 0.8942 | 0.8435 | 0.045* | |
C9 | 0.2930 (2) | 0.7836 (2) | 0.96401 (12) | 0.0366 (4) | |
C10 | 0.3639 (2) | 1.0429 (2) | 0.66355 (12) | 0.0366 (4) | |
H10A | 0.3951 | 1.0951 | 0.7201 | 0.044* | |
H10B | 0.3299 | 1.1324 | 0.6057 | 0.044* | |
C11 | 0.5675 (2) | 0.8869 (2) | 0.62315 (12) | 0.0340 (3) | |
C12 | 0.1952 (3) | 0.7031 (3) | 0.44443 (15) | 0.0557 (5) | |
H12A | 0.0662 | 0.6949 | 0.4271 | 0.084* | |
H12B | 0.3187 | 0.5991 | 0.4223 | 0.084* | |
H12C | 0.2168 | 0.8065 | 0.4081 | 0.084* | |
C13 | 0.1659 (3) | 0.5537 (3) | 0.62202 (18) | 0.0646 (5) | |
H13A | 0.2810 | 0.4530 | 0.5894 | 0.097* | |
H13B | 0.0281 | 0.5430 | 0.6225 | 0.097* | |
H13C | 0.1856 | 0.5584 | 0.6940 | 0.097* | |
O1 | 0.5856 (2) | 0.6407 (2) | 1.17600 (11) | 0.0675 (4) | |
O2 | 0.45322 (16) | 0.74415 (16) | 1.02652 (9) | 0.0459 (3) | |
O3 | 0.17667 (14) | 0.99754 (15) | 0.70317 (8) | 0.0410 (3) | |
O4 | 0.54894 (16) | 0.75011 (15) | 0.60073 (10) | 0.0472 (3) | |
O5 | 0.73879 (16) | 0.91839 (17) | 0.61151 (11) | 0.0571 (4) | |
H1B | 0.040 (2) | 0.802 (2) | 0.5816 (16) | 0.067 (6)* | |
H1A | 0.279 (2) | 0.747 (3) | 0.5738 (16) | 0.068 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0340 (6) | 0.0366 (7) | 0.0567 (9) | −0.0137 (5) | −0.0116 (6) | −0.0086 (6) |
C1 | 0.0462 (9) | 0.0598 (11) | 0.0368 (9) | −0.0195 (8) | −0.0072 (7) | −0.0023 (8) |
C2 | 0.0554 (10) | 0.0640 (11) | 0.0366 (9) | −0.0294 (9) | −0.0012 (8) | 0.0013 (8) |
C3 | 0.0459 (9) | 0.0642 (11) | 0.0437 (10) | −0.0311 (8) | 0.0046 (7) | −0.0071 (9) |
C4 | 0.0322 (7) | 0.0512 (9) | 0.0375 (9) | −0.0207 (6) | 0.0018 (6) | −0.0102 (7) |
C5 | 0.0318 (7) | 0.0694 (11) | 0.0474 (10) | −0.0274 (7) | −0.0002 (7) | −0.0124 (9) |
C6 | 0.0289 (7) | 0.0650 (11) | 0.0413 (9) | −0.0179 (7) | −0.0062 (6) | −0.0105 (8) |
C7 | 0.0275 (7) | 0.0447 (8) | 0.0315 (8) | −0.0107 (6) | −0.0008 (6) | −0.0087 (7) |
C8 | 0.0267 (7) | 0.0534 (9) | 0.0358 (8) | −0.0189 (6) | −0.0009 (6) | −0.0046 (7) |
C9 | 0.0280 (7) | 0.0492 (9) | 0.0345 (8) | −0.0152 (6) | −0.0035 (6) | −0.0080 (7) |
C10 | 0.0345 (7) | 0.0388 (8) | 0.0361 (8) | −0.0131 (6) | −0.0043 (6) | −0.0026 (7) |
C11 | 0.0302 (7) | 0.0415 (8) | 0.0315 (8) | −0.0125 (6) | −0.0090 (6) | −0.0007 (6) |
C12 | 0.0580 (10) | 0.0542 (10) | 0.0547 (11) | −0.0179 (8) | −0.0144 (9) | −0.0018 (9) |
C13 | 0.0706 (12) | 0.0565 (11) | 0.0663 (13) | −0.0243 (10) | −0.0181 (10) | 0.0147 (10) |
O1 | 0.0595 (8) | 0.1038 (11) | 0.0491 (8) | −0.0383 (8) | −0.0243 (6) | 0.0135 (8) |
O2 | 0.0351 (5) | 0.0709 (8) | 0.0374 (6) | −0.0263 (5) | −0.0095 (5) | 0.0047 (6) |
O3 | 0.0282 (5) | 0.0550 (7) | 0.0365 (6) | −0.0115 (4) | −0.0052 (4) | −0.0019 (5) |
O4 | 0.0392 (6) | 0.0417 (6) | 0.0615 (8) | −0.0118 (5) | −0.0088 (5) | −0.0145 (6) |
O5 | 0.0301 (5) | 0.0638 (8) | 0.0809 (10) | −0.0189 (5) | −0.0076 (6) | −0.0134 (7) |
N1—C13 | 1.466 (3) | C7—O3 | 1.361 (2) |
N1—C12 | 1.480 (3) | C7—C8 | 1.381 (2) |
N1—H1B | 0.904 (9) | C8—C9 | 1.381 (2) |
N1—H1A | 0.899 (9) | C8—H8 | 0.9300 |
C1—O1 | 1.209 (2) | C9—O2 | 1.378 (2) |
C1—O2 | 1.378 (2) | C10—O3 | 1.4287 (19) |
C1—C2 | 1.441 (3) | C10—C11 | 1.524 (2) |
C2—C3 | 1.341 (3) | C10—H10A | 0.9700 |
C2—H2 | 0.9300 | C10—H10B | 0.9700 |
C3—C4 | 1.426 (3) | C11—O4 | 1.238 (2) |
C3—H3 | 0.9300 | C11—O5 | 1.2490 (19) |
C4—C9 | 1.392 (2) | C12—H12A | 0.9600 |
C4—C5 | 1.404 (2) | C12—H12B | 0.9600 |
C5—C6 | 1.362 (3) | C12—H12C | 0.9600 |
C5—H5 | 0.9300 | C13—H13A | 0.9600 |
C6—C7 | 1.406 (2) | C13—H13B | 0.9600 |
C6—H6 | 0.9300 | C13—H13C | 0.9600 |
C13—N1—C12 | 112.95 (16) | C9—C8—H8 | 120.9 |
C13—N1—H1B | 106.2 (13) | C7—C8—H8 | 120.9 |
C12—N1—H1B | 107.5 (14) | O2—C9—C8 | 116.35 (13) |
C13—N1—H1A | 111.7 (14) | O2—C9—C4 | 120.33 (15) |
C12—N1—H1A | 107.7 (13) | C8—C9—C4 | 123.32 (14) |
H1B—N1—H1A | 110.8 (19) | O3—C10—C11 | 114.33 (13) |
O1—C1—O2 | 116.32 (16) | O3—C10—H10A | 108.7 |
O1—C1—C2 | 126.56 (18) | C11—C10—H10A | 108.7 |
O2—C1—C2 | 117.12 (15) | O3—C10—H10B | 108.7 |
C3—C2—C1 | 120.98 (18) | C11—C10—H10B | 108.7 |
C3—C2—H2 | 119.5 | H10A—C10—H10B | 107.6 |
C1—C2—H2 | 119.5 | O4—C11—O5 | 127.04 (13) |
C2—C3—C4 | 120.98 (15) | O4—C11—C10 | 119.35 (13) |
C2—C3—H3 | 119.5 | O5—C11—C10 | 113.50 (14) |
C4—C3—H3 | 119.5 | N1—C12—H12A | 109.5 |
C9—C4—C5 | 116.59 (16) | N1—C12—H12B | 109.5 |
C9—C4—C3 | 118.16 (15) | H12A—C12—H12B | 109.5 |
C5—C4—C3 | 125.24 (14) | N1—C12—H12C | 109.5 |
C6—C5—C4 | 121.69 (14) | H12A—C12—H12C | 109.5 |
C6—C5—H5 | 119.2 | H12B—C12—H12C | 109.5 |
C4—C5—H5 | 119.2 | N1—C13—H13A | 109.5 |
C5—C6—C7 | 119.80 (14) | N1—C13—H13B | 109.5 |
C5—C6—H6 | 120.1 | H13A—C13—H13B | 109.5 |
C7—C6—H6 | 120.1 | N1—C13—H13C | 109.5 |
O3—C7—C8 | 124.62 (13) | H13A—C13—H13C | 109.5 |
O3—C7—C6 | 115.05 (13) | H13B—C13—H13C | 109.5 |
C8—C7—C6 | 120.33 (15) | C9—O2—C1 | 122.27 (13) |
C9—C8—C7 | 118.24 (13) | C7—O3—C10 | 117.87 (11) |
C7—O3—C10—C11 | 76.32 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4 | 0.90 (1) | 1.92 (1) | 2.799 (2) | 166 (2) |
N1—H1B···O5i | 0.90 (1) | 1.86 (1) | 2.729 (3) | 160 (2) |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C2H8N+·C11H7O5− |
Mr | 265.26 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.714 (5), 8.146 (7), 12.767 (12) |
α, β, γ (°) | 83.33 (4), 79.16 (3), 67.78 (3) |
V (Å3) | 634.1 (9) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.44 × 0.22 × 0.14 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.955, 0.986 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6310, 2881, 1878 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.131, 0.93 |
No. of reflections | 2881 |
No. of parameters | 182 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.17, −0.16 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4 | 0.899 (9) | 1.917 (11) | 2.799 (2) | 166.2 (19) |
N1—H1B···O5i | 0.904 (9) | 1.862 (12) | 2.729 (3) | 160.1 (19) |
Symmetry code: (i) x−1, y, z. |
Acknowledgements
The author thanks Jilin University for supporting this study.
References
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Matsuda, T., Mizutani, M. & Arnold, S. C. (2000). Macromolecules, 33, 795–800. CrossRef CAS Google Scholar
Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan. Google Scholar
Rigaku/MSC (2002). CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Coumarin derivatives have been widely studied due to the applications in medicine and optical materials. In this paper, we report the synthesis and crystal structure of the title compound, which is a type of carboxyl modified coumarin derivative.
In the title compound, the acetate group twist outside the plane of coumarin group with a C7—O3—C10—C11 torsion angle of 76.3 (2). The hydrogen atom of carboxyl transfer to the dimethylamine molecule forming N—H···O hydrogen bonding interaction (Figure 1).
In the crystal structure of the title compound, the N—H···O hydrogen bonds bewteen coumarin anions and dimethylammonium cations link them to form a chain structure (Figure 2, Table 1).