organic compounds
3-[(Cyclohexylidene)amino]-1-(4-methylphenyl)thiourea
aCollege of Chemistry and Chemical Engineering, Xuchang University, Xuchang, Henan Province 461000, People's Republic of China
*Correspondence e-mail: zhangyanling315@126.com
In the title compound, C14H19N3S, the cyclohexane ring has a chair conformation. The almost planar aminothiourea unit (r.m.s. deviation = 0.0062 Å) is aligned at a dihedral angle of 45.23 (8)° with respect to the benzene ring. Intermolecular N—H⋯N and N—H⋯S hydrogen bonding stabilizes the crystal structure.
Related literature
For related structures and the biological applications of thiosemicarbazones, see: Hu et al. (2006).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell CrysAlis PRO; data reduction: CrysAlis RED (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811015510/xu5197sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811015510/xu5197Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811015510/xu5197Isup3.cml
N-(p-Tolyl)thiosemicarbazide (1.8 g, 10 mmol) and cyclohexanone (0.98 g, 10 mmol) was dissolved in 95% ethanol (15 ml) and the solution was refluxed for 0.5 h. Fine colorless crystals appeared on cooling. They were filtered and washed by 95% ethanol to give 1.6 g of the title compound in 61.5% yield. Single crystals suitable for X-ray measurements were obtained from methanol by slow evaporation at room temperature.
Imino H atoms were located in a difference Fourier map and refined isotropically. Other H atoms were placed in calculated positions with C—H = 0.93–0.97 and refined using a riding model, Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) for the others.
Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell
CrysAlis PRO (Oxford Diffraction, 2010); data reduction: CrysAlis RED (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at 30% probability level. |
C14H19N3S | F(000) = 2240 |
Mr = 261.38 | Dx = 1.202 Mg m−3 |
Orthorhombic, Ibca | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -I 2b 2c | Cell parameters from 2807 reflections |
a = 14.9151 (4) Å | θ = 3.2–70.3° |
b = 22.5593 (5) Å | µ = 1.87 mm−1 |
c = 17.1642 (3) Å | T = 291 K |
V = 5775.3 (2) Å3 | Prismatic, colorless |
Z = 16 | 0.40 × 0.25 × 0.25 mm |
Oxford Diffraction Xcalibur Eos Gemini diffractometer | 2583 independent reflections |
Radiation source: fine-focus sealed tube | 2024 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
ω scans | θmax = 67.1°, θmin = 3.9° |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010) | h = −7→17 |
Tmin = 0.521, Tmax = 0.652 | k = −26→26 |
7202 measured reflections | l = −19→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.162 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.1042P)2 + 0.7804P] where P = (Fo2 + 2Fc2)/3 |
2583 reflections | (Δ/σ)max < 0.001 |
172 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C14H19N3S | V = 5775.3 (2) Å3 |
Mr = 261.38 | Z = 16 |
Orthorhombic, Ibca | Cu Kα radiation |
a = 14.9151 (4) Å | µ = 1.87 mm−1 |
b = 22.5593 (5) Å | T = 291 K |
c = 17.1642 (3) Å | 0.40 × 0.25 × 0.25 mm |
Oxford Diffraction Xcalibur Eos Gemini diffractometer | 2583 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010) | 2024 reflections with I > 2σ(I) |
Tmin = 0.521, Tmax = 0.652 | Rint = 0.032 |
7202 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.162 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.37 e Å−3 |
2583 reflections | Δρmin = −0.25 e Å−3 |
172 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.88952 (5) | 0.07068 (3) | 0.17935 (3) | 0.0599 (3) | |
N1 | 0.84361 (13) | 0.02381 (8) | 0.04022 (10) | 0.0481 (5) | |
N2 | 0.78485 (14) | −0.01953 (8) | 0.14881 (10) | 0.0498 (5) | |
N3 | 0.74084 (15) | −0.05790 (8) | 0.09883 (10) | 0.0514 (5) | |
C1 | 0.89252 (14) | 0.06343 (9) | −0.00784 (12) | 0.0450 (5) | |
C2 | 0.89188 (19) | 0.12432 (11) | 0.00239 (14) | 0.0557 (6) | |
H2A | 0.8572 | 0.1413 | 0.0414 | 0.067* | |
C3 | 0.94341 (19) | 0.15961 (10) | −0.04609 (14) | 0.0597 (6) | |
H3 | 0.9435 | 0.2004 | −0.0385 | 0.072* | |
C4 | 0.99514 (19) | 0.13567 (10) | −0.10592 (13) | 0.0544 (6) | |
C5 | 0.99072 (18) | 0.07526 (10) | −0.11773 (13) | 0.0520 (5) | |
H5 | 1.0221 | 0.0585 | −0.1590 | 0.062* | |
C6 | 0.94050 (17) | 0.03922 (10) | −0.06944 (12) | 0.0505 (5) | |
H6 | 0.9388 | −0.0014 | −0.0782 | 0.061* | |
C7 | 1.0565 (2) | 0.17332 (13) | −0.15541 (18) | 0.0741 (8) | |
H7A | 1.0221 | 0.1928 | −0.1951 | 0.111* | |
H7B | 1.1011 | 0.1486 | −0.1793 | 0.111* | |
H7C | 1.0853 | 0.2025 | −0.1233 | 0.111* | |
C8 | 0.83781 (15) | 0.02349 (9) | 0.11831 (12) | 0.0460 (5) | |
C9 | 0.68926 (18) | −0.09724 (10) | 0.12732 (14) | 0.0538 (6) | |
C10 | 0.6399 (2) | −0.13589 (14) | 0.07092 (18) | 0.0749 (8) | |
H10A | 0.6617 | −0.1284 | 0.0186 | 0.090* | |
H10B | 0.5765 | −0.1262 | 0.0723 | 0.090* | |
C11 | 0.6526 (3) | −0.20137 (15) | 0.0908 (2) | 0.0911 (11) | |
H11A | 0.6166 | −0.2254 | 0.0559 | 0.109* | |
H11B | 0.7149 | −0.2122 | 0.0835 | 0.109* | |
C12 | 0.6250 (3) | −0.21354 (16) | 0.1747 (2) | 0.0961 (11) | |
H12A | 0.5615 | −0.2058 | 0.1808 | 0.115* | |
H12B | 0.6358 | −0.2549 | 0.1869 | 0.115* | |
C13 | 0.6773 (2) | −0.17499 (16) | 0.2301 (2) | 0.0873 (10) | |
H13A | 0.7401 | −0.1861 | 0.2279 | 0.105* | |
H13B | 0.6563 | −0.1820 | 0.2827 | 0.105* | |
C14 | 0.6686 (2) | −0.10938 (14) | 0.21164 (16) | 0.0694 (7) | |
H14A | 0.6081 | −0.0963 | 0.2232 | 0.083* | |
H14B | 0.7096 | −0.0870 | 0.2443 | 0.083* | |
H1 | 0.8188 (16) | −0.0081 (12) | 0.0192 (16) | 0.052 (7)* | |
H2 | 0.799 (2) | −0.0305 (14) | 0.195 (2) | 0.075 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0824 (5) | 0.0632 (4) | 0.0341 (3) | −0.0172 (3) | −0.0022 (3) | −0.0052 (2) |
N1 | 0.0605 (11) | 0.0528 (9) | 0.0309 (8) | −0.0072 (9) | −0.0017 (8) | −0.0002 (7) |
N2 | 0.0634 (11) | 0.0556 (10) | 0.0305 (8) | −0.0083 (9) | 0.0003 (9) | 0.0003 (7) |
N3 | 0.0674 (12) | 0.0519 (9) | 0.0349 (9) | −0.0070 (9) | −0.0031 (9) | −0.0016 (7) |
C1 | 0.0521 (12) | 0.0514 (11) | 0.0316 (10) | −0.0003 (9) | −0.0032 (9) | 0.0030 (8) |
C2 | 0.0735 (15) | 0.0532 (11) | 0.0403 (11) | 0.0110 (11) | 0.0104 (11) | 0.0009 (9) |
C3 | 0.0864 (17) | 0.0448 (11) | 0.0478 (12) | 0.0051 (11) | 0.0066 (13) | 0.0030 (9) |
C4 | 0.0675 (14) | 0.0561 (12) | 0.0395 (11) | 0.0009 (11) | 0.0037 (11) | 0.0078 (9) |
C5 | 0.0638 (13) | 0.0580 (12) | 0.0344 (10) | 0.0066 (11) | 0.0062 (10) | 0.0002 (9) |
C6 | 0.0673 (14) | 0.0482 (10) | 0.0358 (10) | 0.0004 (10) | −0.0008 (10) | −0.0013 (8) |
C7 | 0.094 (2) | 0.0640 (14) | 0.0641 (16) | −0.0064 (15) | 0.0204 (16) | 0.0083 (13) |
C8 | 0.0529 (12) | 0.0526 (11) | 0.0323 (10) | 0.0015 (9) | 0.0001 (9) | −0.0013 (8) |
C9 | 0.0626 (14) | 0.0548 (11) | 0.0441 (12) | −0.0055 (11) | −0.0049 (11) | 0.0044 (9) |
C10 | 0.092 (2) | 0.0761 (16) | 0.0568 (15) | −0.0252 (16) | −0.0137 (15) | 0.0025 (13) |
C11 | 0.114 (3) | 0.0713 (17) | 0.088 (2) | −0.0287 (19) | 0.002 (2) | −0.0052 (16) |
C12 | 0.109 (3) | 0.0764 (19) | 0.103 (3) | −0.0260 (19) | 0.007 (2) | 0.0240 (19) |
C13 | 0.088 (2) | 0.102 (2) | 0.0714 (19) | −0.0172 (19) | 0.0029 (17) | 0.0367 (18) |
C14 | 0.0722 (16) | 0.0869 (18) | 0.0490 (14) | −0.0193 (15) | 0.0081 (13) | 0.0049 (13) |
S1—C8 | 1.681 (2) | C7—H7A | 0.9600 |
N1—C8 | 1.343 (3) | C7—H7B | 0.9600 |
N1—C1 | 1.418 (3) | C7—H7C | 0.9600 |
N1—H1 | 0.89 (3) | C9—C10 | 1.497 (4) |
N2—C8 | 1.356 (3) | C9—C14 | 1.505 (3) |
N2—N3 | 1.384 (3) | C10—C11 | 1.528 (5) |
N2—H2 | 0.86 (3) | C10—H10A | 0.9700 |
N3—C9 | 1.272 (3) | C10—H10B | 0.9700 |
C1—C2 | 1.385 (3) | C11—C12 | 1.523 (5) |
C1—C6 | 1.389 (3) | C11—H11A | 0.9700 |
C2—C3 | 1.385 (4) | C11—H11B | 0.9700 |
C2—H2A | 0.9300 | C12—C13 | 1.506 (5) |
C3—C4 | 1.393 (4) | C12—H12A | 0.9700 |
C3—H3 | 0.9300 | C12—H12B | 0.9700 |
C4—C5 | 1.379 (3) | C13—C14 | 1.519 (5) |
C4—C7 | 1.510 (4) | C13—H13A | 0.9700 |
C5—C6 | 1.382 (3) | C13—H13B | 0.9700 |
C5—H5 | 0.9300 | C14—H14A | 0.9700 |
C6—H6 | 0.9300 | C14—H14B | 0.9700 |
C8—N1—C1 | 128.10 (19) | N3—C9—C10 | 117.1 (2) |
C8—N1—H1 | 112.0 (17) | N3—C9—C14 | 128.3 (2) |
C1—N1—H1 | 119.4 (17) | C10—C9—C14 | 114.6 (2) |
C8—N2—N3 | 118.98 (17) | C9—C10—C11 | 111.0 (3) |
C8—N2—H2 | 115 (2) | C9—C10—H10A | 109.4 |
N3—N2—H2 | 121 (2) | C11—C10—H10A | 109.4 |
C9—N3—N2 | 119.01 (19) | C9—C10—H10B | 109.4 |
C2—C1—C6 | 119.4 (2) | C11—C10—H10B | 109.4 |
C2—C1—N1 | 123.2 (2) | H10A—C10—H10B | 108.0 |
C6—C1—N1 | 117.39 (19) | C12—C11—C10 | 110.6 (3) |
C3—C2—C1 | 119.4 (2) | C12—C11—H11A | 109.5 |
C3—C2—H2A | 120.3 | C10—C11—H11A | 109.5 |
C1—C2—H2A | 120.3 | C12—C11—H11B | 109.5 |
C2—C3—C4 | 121.8 (2) | C10—C11—H11B | 109.5 |
C2—C3—H3 | 119.1 | H11A—C11—H11B | 108.1 |
C4—C3—H3 | 119.1 | C13—C12—C11 | 110.7 (3) |
C5—C4—C3 | 117.7 (2) | C13—C12—H12A | 109.5 |
C5—C4—C7 | 120.1 (2) | C11—C12—H12A | 109.5 |
C3—C4—C7 | 122.1 (2) | C13—C12—H12B | 109.5 |
C4—C5—C6 | 121.3 (2) | C11—C12—H12B | 109.5 |
C4—C5—H5 | 119.4 | H12A—C12—H12B | 108.1 |
C6—C5—H5 | 119.4 | C12—C13—C14 | 112.8 (3) |
C5—C6—C1 | 120.3 (2) | C12—C13—H13A | 109.0 |
C5—C6—H6 | 119.8 | C14—C13—H13A | 109.0 |
C1—C6—H6 | 119.8 | C12—C13—H13B | 109.0 |
C4—C7—H7A | 109.5 | C14—C13—H13B | 109.0 |
C4—C7—H7B | 109.5 | H13A—C13—H13B | 107.8 |
H7A—C7—H7B | 109.5 | C9—C14—C13 | 111.1 (3) |
C4—C7—H7C | 109.5 | C9—C14—H14A | 109.4 |
H7A—C7—H7C | 109.5 | C13—C14—H14A | 109.4 |
H7B—C7—H7C | 109.5 | C9—C14—H14B | 109.4 |
N1—C8—N2 | 115.25 (19) | C13—C14—H14B | 109.4 |
N1—C8—S1 | 126.08 (17) | H14A—C14—H14B | 108.0 |
N2—C8—S1 | 118.67 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N3i | 0.89 (3) | 2.48 (3) | 3.268 (3) | 148 (2) |
N2—H2···S1ii | 0.86 (3) | 2.70 (3) | 3.531 (2) | 164 (3) |
Symmetry codes: (i) −x+3/2, y, −z; (ii) x, −y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H19N3S |
Mr | 261.38 |
Crystal system, space group | Orthorhombic, Ibca |
Temperature (K) | 291 |
a, b, c (Å) | 14.9151 (4), 22.5593 (5), 17.1642 (3) |
V (Å3) | 5775.3 (2) |
Z | 16 |
Radiation type | Cu Kα |
µ (mm−1) | 1.87 |
Crystal size (mm) | 0.40 × 0.25 × 0.25 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Eos Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2010) |
Tmin, Tmax | 0.521, 0.652 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7202, 2583, 2024 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.162, 1.02 |
No. of reflections | 2583 |
No. of parameters | 172 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.37, −0.25 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2010), CrysAlis RED (Oxford Diffraction, 2010), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N3i | 0.89 (3) | 2.48 (3) | 3.268 (3) | 148 (2) |
N2—H2···S1ii | 0.86 (3) | 2.70 (3) | 3.531 (2) | 164 (3) |
Symmetry codes: (i) −x+3/2, y, −z; (ii) x, −y, −z+1/2. |
Acknowledgements
The authors thank the Natural Science Foundation of the Education Department of Henan Province, China (2010B150029), the Natural Science Foundation of Henan Province, China (112102310538, 082300420110) and the Scientific Research Foundation of Xuchang University, China (2009086) for supporting this work.
References
Hu, W.-X., Zhou, W., Xia, C.-N. & Wen, X. (2006). Bioorg. Med. Chem. Lett. 16, 2213–2218. Web of Science CrossRef PubMed CAS Google Scholar
Oxford Diffraction (2010). CrysAlis PRO and CrysAlis RED. Oxford Diffraction Ltd, Yarnton, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Thiosemicarbazones have attracted much attention as they show potential application in the biological field (Hu et al., 2006). There are a few single-crystal reports about them. Detailed information on their molecular and crystal structures is necessary to understand their anticancer activity. The molecular structure of (I) is shown in Fig 1. The cyclohexane ring adopts a chair conformation. The almost planar aminothiourea unit (r.m.s. deviation = 0.0062 Å) is aligned at a dihedral angle of 45.23 (8)° with respect to the plane of the benzene ring. In the crystal structure of the title compound, there are N—H···N an N—H···S hydrogen-bond interactions (Table 1).