organic compounds
Methyl 1-(7-acetamido-5,8-dimethoxyquinolin-2-yl)-4-methyl-β-carboline-3-carboxylate
aUniversity Mainz, Duesbergweg 10-14, 55099 Mainz, Germany
*Correspondence e-mail: detert@uni-mainz.de
The title compound, C27H24N4O5, is an intermediate in the synthesis of lavendamycin via a ruthenium-catalysed [2 + 2 + 2] cycloaddition. An intramolecular hydrogen-bond bridge from the carboline to the quinoline stabilizes a highly planar geometry [maximum deviation = 0.065 (6) Å] for the two rigid units. This hydrogen-bond-stabilized coplanarity has a very close analogy in the structure of the antitumor antibiotic streptonigrin in the solid state and in solution. Intermolecular hydrogen-bond bridges of groups along the a axis and π–π stacking interactions [centroid–centroid distance = 3.665 (9) Å] connect molecules arranged in a parallel manner.
Related literature
For metal-catalysed transformations of tethered alkynyl-ynamides to carbolines and other heteroannulated indoles, see: Nissen et al. (2011); Dassonneville et al. (2010, 2011). For the synthesis of the natural product lavendamycin (systematic name 1-(7-amino-5,8-dioxoquinolin-2-yl)-4-methyl-9H-pyrido[3,4-b]indole-3-carboxylic acid) via [2 + 2 + 2] cycloaddition, see: Nissen & Detert (2011). For the isololation of lavendamycin from streptomyces lavendulae, see: Doyle et al. (1981). For the anti-tumor activity of lavendamycin, see: Fang et al. (2003). For the preparation of lavandamycin, see: Behforouz et al. (1996) Godard et al. (1993). For related structures, see: Chiu & Lipscomb (1975); Harding et al. (1993).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.
Supporting information
10.1107/S1600536811018794/bt5551sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811018794/bt5551Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811018794/bt5551Isup3.cml
Pd/C (10%, 47 mg, 44 µmol, 5 mol%) was added to a suspension of Methyl 1-(5,8-dimethoxy-7-nitroquinolin-2-yl)-4-methyl-β-carboline-3-carboxylate (405 mg, 0.86 mmol) (Nissen & Detert, 2011) in THF (170 ml) and the mixture was stirred 13 h under H2 atmosphere. Ac2O (5.0 ml) was added and the mixture was heated to 323 K. After 3 h the solvent was removed in vacuo, the residue dissolved in CH2Cl2 and filtered through celite. The filtrate was washed with aqueous NaHCO3 (8%, 8 ml), dried (MgSO4) and concentrated. Crystallization from chloroform/diethyl ether yielded the title compound (399 mg, 0.82 mmol, 96%) as a bright yellow solid. M.p. 467–468 K Rf: 0.12 (SiO2, hexane:ethyl acetate:ethanol 6:3:1).
Hydrogen atoms attached to carbons were placed at calculated positions with C—H = 0.95 Å (aromatic) or 0.98–0.99 Å (sp3 C-atom). All H atoms were refined in the riding-model approximation with isotropic displacement parameters set at 1.2–1.5 times of the Ueq of the parent atom.
Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell
CAD-4 Software (Enraf–Nonius, 1989); data reduction: CORINC (Dräger & Gattow, 1971); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).Fig. 1. View of compound I. Displacement ellipsoids are drawn at the 50% probability level. | |
Fig. 2. Part of the packing diagram showing the hydrogen bonds. View along b-axis. |
C27H24N4O5 | Z = 2 |
Mr = 484.50 | F(000) = 508 |
Triclinic, P1 | Dx = 1.386 Mg m−3 |
Hall symbol: -P 1 | Cu Kα radiation, λ = 1.54178 Å |
a = 4.646 (10) Å | Cell parameters from 25 reflections |
b = 13.81 (3) Å | θ = 10–25° |
c = 18.768 (19) Å | µ = 0.80 mm−1 |
α = 102.06 (9)° | T = 193 K |
β = 95.23 (10)° | 10, yellow |
γ = 96.85 (11)° | 0.58 × 0.06 × 0.03 mm |
V = 1161 (4) Å3 |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.054 |
Radiation source: rotating anode | θmax = 70.0°, θmin = 2.4° |
Graphite monochromator | h = −5→0 |
ω/2θ scans | k = −16→16 |
4993 measured reflections | l = −22→22 |
4412 independent reflections | 3 standard reflections every 60 min |
2069 reflections with I > 2σ(I) | intensity decay: 2% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.083 | H-atom parameters constrained |
wR(F2) = 0.248 | w = 1/[σ2(Fo2) + (0.1159P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.99 | (Δ/σ)max < 0.001 |
4412 reflections | Δρmax = 0.26 e Å−3 |
330 parameters | Δρmin = −0.34 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0010 (5) |
C27H24N4O5 | γ = 96.85 (11)° |
Mr = 484.50 | V = 1161 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 4.646 (10) Å | Cu Kα radiation |
b = 13.81 (3) Å | µ = 0.80 mm−1 |
c = 18.768 (19) Å | T = 193 K |
α = 102.06 (9)° | 0.58 × 0.06 × 0.03 mm |
β = 95.23 (10)° |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.054 |
4993 measured reflections | 3 standard reflections every 60 min |
4412 independent reflections | intensity decay: 2% |
2069 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.083 | 0 restraints |
wR(F2) = 0.248 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.26 e Å−3 |
4412 reflections | Δρmin = −0.34 e Å−3 |
330 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.9484 (9) | 0.6415 (3) | 0.3958 (2) | 0.0631 (12) | |
O2 | 1.1937 (9) | 0.5349 (3) | 0.43953 (19) | 0.0530 (11) | |
O3 | 0.5569 (7) | −0.0529 (2) | 0.16500 (18) | 0.0381 (8) | |
N4 | 0.7247 (8) | −0.2335 (3) | 0.1735 (2) | 0.0314 (9) | |
H4 | 0.5329 | −0.2404 | 0.1660 | 0.038* | |
O5 | 1.1210 (8) | −0.3053 (3) | 0.1464 (2) | 0.0691 (14) | |
O6 | 1.4309 (8) | −0.0606 (3) | 0.38367 (19) | 0.0469 (10) | |
N1 | 0.9463 (9) | 0.3816 (3) | 0.3424 (2) | 0.0363 (10) | |
N2 | 0.4724 (9) | 0.2191 (3) | 0.1858 (2) | 0.0367 (10) | |
H2 | 0.4994 | 0.1561 | 0.1806 | 0.044* | |
N3 | 0.8225 (9) | 0.1206 (3) | 0.2585 (2) | 0.0349 (10) | |
C1 | 0.9992 (12) | 0.5579 (4) | 0.3929 (3) | 0.0392 (12) | |
C2 | 1.3460 (13) | 0.6178 (4) | 0.4953 (3) | 0.0506 (15) | |
H2A | 1.4680 | 0.6626 | 0.4725 | 0.076* | |
H2B | 1.4695 | 0.5926 | 0.5305 | 0.076* | |
H2C | 1.2039 | 0.6545 | 0.5210 | 0.076* | |
C3 | 0.8488 (11) | 0.4675 (3) | 0.3360 (3) | 0.0362 (12) | |
C4 | 0.8328 (11) | 0.2958 (3) | 0.2955 (3) | 0.0361 (12) | |
C5 | 0.6143 (11) | 0.2973 (3) | 0.2397 (3) | 0.0341 (11) | |
C6 | 0.2800 (11) | 0.2556 (4) | 0.1412 (3) | 0.0352 (11) | |
C7 | 0.2906 (11) | 0.3594 (4) | 0.1682 (3) | 0.0355 (11) | |
C8 | 0.5118 (11) | 0.3860 (3) | 0.2323 (3) | 0.0344 (11) | |
C9 | 0.6334 (11) | 0.4754 (3) | 0.2817 (3) | 0.0368 (12) | |
C10 | 0.5268 (13) | 0.5721 (4) | 0.2747 (3) | 0.0508 (15) | |
H10A | 0.4642 | 0.6039 | 0.3214 | 0.076* | |
H10B | 0.3616 | 0.5585 | 0.2359 | 0.076* | |
H10C | 0.6850 | 0.6169 | 0.2623 | 0.076* | |
C11 | 0.1095 (11) | 0.4101 (4) | 0.1309 (3) | 0.0416 (13) | |
H11 | 0.1105 | 0.4800 | 0.1476 | 0.050* | |
C12 | −0.0723 (12) | 0.3573 (4) | 0.0691 (3) | 0.0490 (14) | |
H12 | −0.1993 | 0.3914 | 0.0439 | 0.059* | |
C13 | −0.0731 (12) | 0.2558 (4) | 0.0431 (3) | 0.0477 (14) | |
H13 | −0.1969 | 0.2220 | −0.0002 | 0.057* | |
C14 | 0.0991 (12) | 0.2038 (4) | 0.0782 (3) | 0.0432 (13) | |
H14 | 0.0965 | 0.1340 | 0.0605 | 0.052* | |
C15 | 0.9462 (11) | 0.2043 (3) | 0.3056 (3) | 0.0367 (12) | |
C16 | 0.9155 (11) | 0.0334 (3) | 0.2670 (3) | 0.0320 (11) | |
C17 | 0.7812 (10) | −0.0564 (3) | 0.2176 (3) | 0.0330 (11) | |
C18 | 0.6517 (15) | −0.0421 (5) | 0.0971 (3) | 0.0645 (19) | |
H18A | 0.7902 | 0.0195 | 0.1047 | 0.097* | |
H18B | 0.4831 | −0.0388 | 0.0627 | 0.097* | |
H18C | 0.7473 | −0.0996 | 0.0769 | 0.097* | |
C19 | 0.8703 (10) | −0.1450 (3) | 0.2232 (3) | 0.0323 (11) | |
C20 | 0.8550 (10) | −0.3067 (4) | 0.1373 (3) | 0.0374 (12) | |
C21 | 0.6628 (11) | −0.3906 (4) | 0.0857 (3) | 0.0447 (14) | |
H21A | 0.7272 | −0.3984 | 0.0368 | 0.067* | |
H21B | 0.4610 | −0.3762 | 0.0833 | 0.067* | |
H21C | 0.6731 | −0.4525 | 0.1029 | 0.067* | |
C22 | 1.0881 (11) | −0.1513 (4) | 0.2785 (3) | 0.0373 (12) | |
H22 | 1.1437 | −0.2143 | 0.2820 | 0.045* | |
C23 | 1.2197 (10) | −0.0657 (4) | 0.3273 (3) | 0.0338 (11) | |
C24 | 1.5056 (13) | −0.1523 (4) | 0.3972 (3) | 0.0514 (15) | |
H24A | 1.3311 | −0.1930 | 0.4064 | 0.077* | |
H24B | 1.6528 | −0.1387 | 0.4403 | 0.077* | |
H24C | 1.5846 | −0.1885 | 0.3544 | 0.077* | |
C25 | 1.1358 (11) | 0.0293 (3) | 0.3224 (3) | 0.0345 (11) | |
C26 | 1.2625 (12) | 0.1205 (4) | 0.3705 (3) | 0.0413 (13) | |
H26 | 1.4150 | 0.1214 | 0.4080 | 0.050* | |
C27 | 1.1656 (11) | 0.2061 (4) | 0.3626 (3) | 0.0392 (12) | |
H27 | 1.2453 | 0.2676 | 0.3955 | 0.047* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.068 (3) | 0.032 (2) | 0.077 (3) | 0.006 (2) | −0.016 (2) | −0.004 (2) |
O2 | 0.073 (3) | 0.037 (2) | 0.042 (2) | −0.003 (2) | −0.006 (2) | 0.0036 (17) |
O3 | 0.038 (2) | 0.0337 (18) | 0.0398 (19) | 0.0018 (16) | −0.0003 (17) | 0.0052 (15) |
N4 | 0.022 (2) | 0.0242 (19) | 0.044 (2) | 0.0010 (16) | 0.0027 (18) | 0.0013 (17) |
O5 | 0.0185 (19) | 0.067 (3) | 0.097 (3) | 0.0068 (18) | −0.001 (2) | −0.033 (2) |
O6 | 0.047 (2) | 0.039 (2) | 0.050 (2) | 0.0009 (17) | −0.0097 (18) | 0.0100 (17) |
N1 | 0.039 (2) | 0.028 (2) | 0.040 (2) | −0.0042 (18) | 0.009 (2) | 0.0057 (18) |
N2 | 0.036 (2) | 0.031 (2) | 0.038 (2) | −0.0019 (18) | 0.002 (2) | 0.0024 (18) |
N3 | 0.038 (2) | 0.027 (2) | 0.034 (2) | −0.0025 (18) | 0.0078 (19) | −0.0016 (17) |
C1 | 0.042 (3) | 0.029 (3) | 0.044 (3) | −0.002 (2) | 0.012 (3) | 0.003 (2) |
C2 | 0.069 (4) | 0.033 (3) | 0.041 (3) | −0.006 (3) | 0.000 (3) | 0.000 (2) |
C3 | 0.047 (3) | 0.024 (2) | 0.038 (3) | 0.001 (2) | 0.016 (2) | 0.007 (2) |
C4 | 0.040 (3) | 0.032 (3) | 0.033 (3) | −0.004 (2) | 0.013 (2) | 0.001 (2) |
C5 | 0.033 (3) | 0.027 (2) | 0.039 (3) | −0.002 (2) | 0.010 (2) | 0.003 (2) |
C6 | 0.031 (3) | 0.037 (3) | 0.037 (3) | 0.004 (2) | 0.008 (2) | 0.005 (2) |
C7 | 0.030 (3) | 0.039 (3) | 0.035 (3) | 0.001 (2) | 0.011 (2) | 0.002 (2) |
C8 | 0.034 (3) | 0.036 (3) | 0.034 (3) | 0.001 (2) | 0.015 (2) | 0.008 (2) |
C9 | 0.042 (3) | 0.028 (2) | 0.038 (3) | 0.000 (2) | 0.012 (2) | 0.002 (2) |
C10 | 0.058 (4) | 0.038 (3) | 0.050 (3) | 0.004 (3) | −0.007 (3) | 0.004 (3) |
C11 | 0.041 (3) | 0.035 (3) | 0.052 (3) | 0.010 (2) | 0.010 (3) | 0.011 (3) |
C12 | 0.041 (3) | 0.052 (3) | 0.053 (3) | 0.004 (3) | 0.004 (3) | 0.012 (3) |
C13 | 0.039 (3) | 0.050 (3) | 0.048 (3) | −0.002 (3) | −0.002 (3) | 0.004 (3) |
C14 | 0.045 (3) | 0.035 (3) | 0.047 (3) | 0.001 (2) | 0.007 (3) | 0.005 (2) |
C15 | 0.040 (3) | 0.031 (3) | 0.036 (3) | −0.002 (2) | 0.006 (2) | 0.002 (2) |
C16 | 0.033 (3) | 0.028 (2) | 0.034 (3) | 0.001 (2) | 0.005 (2) | 0.006 (2) |
C17 | 0.029 (3) | 0.033 (3) | 0.034 (3) | 0.002 (2) | 0.000 (2) | 0.005 (2) |
C18 | 0.075 (5) | 0.071 (4) | 0.040 (3) | −0.016 (4) | −0.004 (3) | 0.016 (3) |
C19 | 0.028 (3) | 0.025 (2) | 0.039 (3) | −0.003 (2) | 0.001 (2) | 0.002 (2) |
C20 | 0.020 (2) | 0.040 (3) | 0.046 (3) | 0.004 (2) | −0.003 (2) | −0.001 (2) |
C21 | 0.032 (3) | 0.039 (3) | 0.054 (3) | 0.002 (2) | 0.002 (3) | −0.009 (3) |
C22 | 0.038 (3) | 0.032 (3) | 0.041 (3) | 0.003 (2) | 0.005 (2) | 0.008 (2) |
C23 | 0.026 (2) | 0.038 (3) | 0.037 (3) | 0.001 (2) | 0.003 (2) | 0.011 (2) |
C24 | 0.047 (3) | 0.049 (3) | 0.057 (4) | 0.003 (3) | −0.008 (3) | 0.020 (3) |
C25 | 0.032 (3) | 0.034 (3) | 0.033 (3) | −0.006 (2) | 0.002 (2) | 0.003 (2) |
C26 | 0.040 (3) | 0.038 (3) | 0.038 (3) | −0.007 (2) | −0.004 (2) | 0.004 (2) |
C27 | 0.043 (3) | 0.031 (3) | 0.037 (3) | −0.003 (2) | 0.002 (2) | 0.001 (2) |
O1—C1 | 1.198 (6) | C16—C17 | 1.420 (7) |
O2—C1 | 1.313 (6) | C17—C19 | 1.359 (7) |
O2—C2 | 1.442 (6) | C19—C22 | 1.406 (7) |
O3—C17 | 1.380 (6) | C20—C21 | 1.485 (7) |
O3—C18 | 1.417 (7) | C22—C23 | 1.373 (7) |
N4—C20 | 1.336 (6) | C23—C25 | 1.431 (7) |
N4—C19 | 1.425 (6) | C25—C26 | 1.414 (7) |
O5—C20 | 1.229 (6) | C26—C27 | 1.346 (7) |
O6—C23 | 1.360 (6) | N2—H2 | 0.8800 |
O6—C24 | 1.419 (6) | N4—H4 | 0.8800 |
N1—C4 | 1.337 (6) | C2—H2A | 0.9800 |
N1—C3 | 1.342 (6) | C2—H2B | 0.9800 |
N2—C5 | 1.370 (6) | C2—H2C | 0.9800 |
N2—C6 | 1.380 (6) | C10—H10A | 0.9800 |
N3—C15 | 1.330 (6) | C10—H10B | 0.9800 |
N3—C16 | 1.362 (6) | C10—H10C | 0.9800 |
C1—C3 | 1.512 (7) | C11—H11 | 0.9500 |
C3—C9 | 1.392 (7) | C12—H12 | 0.9500 |
C4—C5 | 1.396 (7) | C13—H13 | 0.9500 |
C4—C15 | 1.467 (7) | C14—H14 | 0.9500 |
C5—C8 | 1.395 (7) | C18—H18A | 0.9800 |
C6—C14 | 1.392 (7) | C18—H18B | 0.9800 |
C6—C7 | 1.410 (7) | C18—H18C | 0.9800 |
C7—C11 | 1.388 (7) | C21—H21A | 0.9800 |
C7—C8 | 1.462 (7) | C21—H21B | 0.9800 |
C8—C9 | 1.400 (7) | C21—H21C | 0.9800 |
C9—C10 | 1.505 (7) | C22—H22 | 0.9500 |
C11—C12 | 1.383 (7) | C24—H24A | 0.9800 |
C12—C13 | 1.383 (8) | C24—H24B | 0.9800 |
C13—C14 | 1.352 (7) | C24—H24C | 0.9800 |
C15—C27 | 1.402 (7) | C26—H26 | 0.9500 |
C16—C25 | 1.406 (7) | C27—H27 | 0.9500 |
C1—O2—C2 | 115.5 (4) | C16—C25—C26 | 117.4 (5) |
C17—O3—C18 | 113.6 (4) | C16—C25—C23 | 119.0 (4) |
C20—N4—C19 | 125.5 (4) | C26—C25—C23 | 123.6 (5) |
C23—O6—C24 | 117.3 (4) | C27—C26—C25 | 119.5 (5) |
C4—N1—C3 | 120.2 (5) | C26—C27—C15 | 119.7 (5) |
C5—N2—C6 | 108.6 (4) | C6—N2—H2 | 126.00 |
C15—N3—C16 | 117.6 (4) | C5—N2—H2 | 126.00 |
O1—C1—O2 | 123.1 (5) | C19—N4—H4 | 117.00 |
O1—C1—C3 | 124.4 (5) | C20—N4—H4 | 117.00 |
O2—C1—C3 | 112.5 (4) | O2—C2—H2A | 110.00 |
N1—C3—C9 | 124.4 (4) | O2—C2—H2B | 109.00 |
N1—C3—C1 | 113.9 (5) | O2—C2—H2C | 109.00 |
C9—C3—C1 | 121.7 (4) | H2A—C2—H2B | 109.00 |
N1—C4—C5 | 118.9 (5) | H2A—C2—H2C | 109.00 |
N1—C4—C15 | 117.8 (5) | H2B—C2—H2C | 109.00 |
C5—C4—C15 | 123.2 (4) | C9—C10—H10A | 109.00 |
N2—C5—C8 | 110.2 (4) | C9—C10—H10B | 109.00 |
N2—C5—C4 | 128.5 (5) | C9—C10—H10C | 110.00 |
C8—C5—C4 | 121.4 (4) | H10A—C10—H10B | 109.00 |
N2—C6—C14 | 128.4 (5) | H10A—C10—H10C | 109.00 |
N2—C6—C7 | 109.4 (4) | H10B—C10—H10C | 109.00 |
C14—C6—C7 | 122.2 (5) | C7—C11—H11 | 120.00 |
C11—C7—C6 | 118.2 (5) | C12—C11—H11 | 121.00 |
C11—C7—C8 | 136.1 (5) | C11—C12—H12 | 119.00 |
C6—C7—C8 | 105.7 (4) | C13—C12—H12 | 119.00 |
C5—C8—C9 | 119.0 (5) | C12—C13—H13 | 119.00 |
C5—C8—C7 | 106.1 (4) | C14—C13—H13 | 119.00 |
C9—C8—C7 | 134.8 (5) | C6—C14—H14 | 121.00 |
C3—C9—C8 | 116.0 (5) | C13—C14—H14 | 121.00 |
C3—C9—C10 | 124.0 (4) | O3—C18—H18A | 110.00 |
C8—C9—C10 | 120.0 (5) | O3—C18—H18B | 109.00 |
C12—C11—C7 | 119.0 (5) | O3—C18—H18C | 109.00 |
C11—C12—C13 | 121.4 (5) | H18A—C18—H18B | 109.00 |
C14—C13—C12 | 121.3 (5) | H18A—C18—H18C | 109.00 |
C13—C14—C6 | 118.0 (5) | H18B—C18—H18C | 109.00 |
N3—C15—C27 | 123.1 (5) | C20—C21—H21A | 109.00 |
N3—C15—C4 | 115.5 (5) | C20—C21—H21B | 109.00 |
C27—C15—C4 | 121.4 (4) | C20—C21—H21C | 110.00 |
N3—C16—C25 | 122.7 (4) | H21A—C21—H21B | 109.00 |
N3—C16—C17 | 117.9 (4) | H21A—C21—H21C | 109.00 |
C25—C16—C17 | 119.4 (4) | H21B—C21—H21C | 109.00 |
C19—C17—O3 | 120.5 (4) | C19—C22—H22 | 120.00 |
C19—C17—C16 | 120.0 (4) | C23—C22—H22 | 120.00 |
O3—C17—C16 | 119.5 (4) | O6—C24—H24A | 109.00 |
C17—C19—C22 | 121.7 (4) | O6—C24—H24B | 109.00 |
C17—C19—N4 | 118.0 (4) | O6—C24—H24C | 109.00 |
C22—C19—N4 | 120.2 (4) | H24A—C24—H24B | 109.00 |
O5—C20—N4 | 121.8 (5) | H24A—C24—H24C | 109.00 |
O5—C20—C21 | 121.4 (5) | H24B—C24—H24C | 110.00 |
N4—C20—C21 | 116.8 (4) | C25—C26—H26 | 120.00 |
C23—C22—C19 | 119.5 (5) | C27—C26—H26 | 120.00 |
O6—C23—C22 | 125.9 (5) | C15—C27—H27 | 120.00 |
O6—C23—C25 | 113.7 (4) | C26—C27—H27 | 120.00 |
C22—C23—C25 | 120.5 (5) | ||
C2—O2—C1—O1 | −0.2 (8) | N2—C6—C14—C13 | 179.9 (5) |
C2—O2—C1—C3 | 179.9 (4) | C7—C6—C14—C13 | −0.7 (8) |
C4—N1—C3—C9 | −1.0 (7) | C16—N3—C15—C27 | 0.1 (7) |
C4—N1—C3—C1 | −179.9 (4) | C16—N3—C15—C4 | −178.3 (4) |
O1—C1—C3—N1 | 178.5 (5) | N1—C4—C15—N3 | 178.7 (4) |
O2—C1—C3—N1 | −1.6 (6) | C5—C4—C15—N3 | −1.4 (7) |
O1—C1—C3—C9 | −0.4 (8) | N1—C4—C15—C27 | 0.3 (7) |
O2—C1—C3—C9 | 179.5 (5) | C5—C4—C15—C27 | −179.8 (5) |
C3—N1—C4—C5 | 0.6 (7) | C15—N3—C16—C25 | −0.6 (7) |
C3—N1—C4—C15 | −179.5 (4) | C15—N3—C16—C17 | 179.1 (5) |
C6—N2—C5—C8 | 1.5 (5) | C18—O3—C17—C19 | −88.9 (6) |
C6—N2—C5—C4 | −178.0 (5) | C18—O3—C17—C16 | 92.3 (6) |
N1—C4—C5—N2 | 179.1 (5) | N3—C16—C17—C19 | 179.0 (4) |
C15—C4—C5—N2 | −0.8 (8) | C25—C16—C17—C19 | −1.4 (7) |
N1—C4—C5—C8 | −0.4 (7) | N3—C16—C17—O3 | −2.3 (7) |
C15—C4—C5—C8 | 179.7 (4) | C25—C16—C17—O3 | 177.4 (4) |
C5—N2—C6—C14 | 177.4 (5) | O3—C17—C19—C22 | −176.8 (4) |
C5—N2—C6—C7 | −2.0 (5) | C16—C17—C19—C22 | 2.0 (7) |
N2—C6—C7—C11 | −179.4 (4) | O3—C17—C19—N4 | −0.2 (7) |
C14—C6—C7—C11 | 1.1 (7) | C16—C17—C19—N4 | 178.6 (4) |
N2—C6—C7—C8 | 1.7 (5) | C20—N4—C19—C17 | 135.4 (5) |
C14—C6—C7—C8 | −177.8 (5) | C20—N4—C19—C22 | −47.9 (7) |
N2—C5—C8—C9 | −178.9 (4) | C19—N4—C20—O5 | 2.7 (8) |
C4—C5—C8—C9 | 0.6 (7) | C19—N4—C20—C21 | −177.5 (4) |
N2—C5—C8—C7 | −0.4 (5) | C17—C19—C22—C23 | −1.4 (7) |
C4—C5—C8—C7 | 179.1 (4) | N4—C19—C22—C23 | −178.0 (5) |
C11—C7—C8—C5 | −179.3 (6) | C24—O6—C23—C22 | −5.6 (7) |
C6—C7—C8—C5 | −0.8 (5) | C24—O6—C23—C25 | 173.7 (4) |
C11—C7—C8—C9 | −1.1 (10) | C19—C22—C23—O6 | 179.5 (5) |
C6—C7—C8—C9 | 177.4 (5) | C19—C22—C23—C25 | 0.2 (7) |
N1—C3—C9—C8 | 1.2 (7) | N3—C16—C25—C26 | −0.1 (7) |
C1—C3—C9—C8 | 179.9 (5) | C17—C16—C25—C26 | −179.8 (5) |
N1—C3—C9—C10 | −179.7 (5) | N3—C16—C25—C23 | 179.9 (4) |
C1—C3—C9—C10 | −0.9 (8) | C17—C16—C25—C23 | 0.2 (7) |
C5—C8—C9—C3 | −1.0 (7) | O6—C23—C25—C16 | −179.0 (4) |
C7—C8—C9—C3 | −179.0 (5) | C22—C23—C25—C16 | 0.3 (7) |
C5—C8—C9—C10 | 179.9 (5) | O6—C23—C25—C26 | 1.0 (7) |
C7—C8—C9—C10 | 1.9 (8) | C22—C23—C25—C26 | −179.7 (5) |
C6—C7—C11—C12 | −0.1 (7) | C16—C25—C26—C27 | 1.4 (7) |
C8—C7—C11—C12 | 178.3 (5) | C23—C25—C26—C27 | −178.7 (5) |
C7—C11—C12—C13 | −1.2 (8) | C25—C26—C27—C15 | −1.8 (8) |
C11—C12—C13—C14 | 1.6 (9) | N3—C15—C27—C26 | 1.1 (8) |
C12—C13—C14—C6 | −0.6 (8) | C4—C15—C27—C26 | 179.5 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···N3 | 0.88 | 2.17 | 2.693 (7) | 118 |
N4—H4···O5i | 0.88 | 1.98 | 2.824 (8) | 160 |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C27H24N4O5 |
Mr | 484.50 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 193 |
a, b, c (Å) | 4.646 (10), 13.81 (3), 18.768 (19) |
α, β, γ (°) | 102.06 (9), 95.23 (10), 96.85 (11) |
V (Å3) | 1161 (4) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm−1) | 0.80 |
Crystal size (mm) | 0.58 × 0.06 × 0.03 |
Data collection | |
Diffractometer | Enraf–Nonius CAD-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4993, 4412, 2069 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.609 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.083, 0.248, 0.99 |
No. of reflections | 4412 |
No. of parameters | 330 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.26, −0.34 |
Computer programs: CAD-4 Software (Enraf–Nonius, 1989), CORINC (Dräger & Gattow, 1971), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···N3 | 0.88 | 2.17 | 2.693 (7) | 118 |
N4—H4···O5i | 0.88 | 1.98 | 2.824 (8) | 160 |
Symmetry code: (i) x−1, y, z. |
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound was prepared as part of a larger project focusing on the synthesis of indolo-annulated heterocycles via [2 + 2+2] cycloaddition of alkynyl-ynamides and nitriles or heterocumulenes catalyzed by rhodium or ruthenium (Nissen et al., 2011; Dassonneville et al., 2011) and is a synthetic precursor of the natural product lavendamycin (Nissen & Detert, 2011). The molecule is built up by two rigid and planar units, both are coplanar. This flat structure is stabilized by an intramolecular hydrogen bond from the carboline-NH to the quinoline-N N2—H2···N3 with a distance of 2.17 Å. Whereas the ester group is coplanar with the carboline core [torsion angle O1—C1—C3—C9 of -0.4 (8)°], the acetamido group is twisted out of the plane of the quinoline framework. The torsion angle C20—N4—C19—C22 amounts to -47.9 (7)°. This torsion can result from the sterical hindrance due to the neighbouring methoxy group, but its ability to act as a hydrogen bridge donor and acceptor is important for the formation of crystals of the title compound. Parallel molecules, arranged in the shape of tilted staples are connected to infinite chains via H-bridging along the a-axis. The tilt angle of the mean plane of the molecules relative to the ab-plane is 54.3°. The second interaction is π-π-stacking, resulting in a distance of only 3.665 (9) Å of the centroids of the pyrrole ring (N2—C6) and the benzo-ring (C6—C14) (symmetry code 1+X,Y,Z). Two molecules, connected via a center of inversion fill the unit cell.