organic compounds
(2R,6S)-tert-Butyl 2-(benzhydrylcarbamoyl)-6-methylmorpholine-4-carboxylate
aShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, People's Republic of China, and bCentral Research Institute, Shanghai Pharmaceutical Group Co. Ltd, 555 Zuchongzhi Road, Shanghai 201203, People's Republic of China
*Correspondence e-mail: xiagx@pharm-sh.com.cn
The title compound, C24H30N2O4, was obtained by the reaction of (2R,6S)-4-(tert-butoxycarbonyl)-6-methylmorpholine-2-carboxylic acid with diphenylmethanamine in dimethylformamide solution. The morpholine ring is in a chair conformation. In the crystal, weak intermolecular C—H⋯O hydrogen bonds link molecules into chains along the b axis.
Related literature
For a review of the biological relevance and synthesis of C-substituted morpholine derivatives, see: Wijtmans et al. (2004). For applications of morpholine derivatives as drugs, see: Dando & Perry (2004); Hajos et al. (2004); Hale et al. (1998); Versiani et al. (2002). For agrochemical fungicides and bactericides containing a morpholine skeleton, see: Dieckmann et al. (1993). For applications of morpholines as chiral auxiliaries in see: Dave & Sasaki (2004); Enders et al. (1994).
Experimental
Crystal data
|
Data collection
|
Refinement
|
Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811017764/cv5082sup1.cif
contains datablocks I, global. DOI:Supporting information file. DOI: 10.1107/S1600536811017764/cv5082Isup2.cdx
Structure factors: contains datablock I. DOI: 10.1107/S1600536811017764/cv5082Isup3.hkl
Supporting information file. DOI: 10.1107/S1600536811017764/cv5082Isup4.cml
The schematic representation of the synthesis is given in Fig. 2. To a solution of EDC (125 mg, 0.54 mmol) and HOAt (74 mg, 0.54 mmol) in DMF (2 ml) was added diphenylmethanamine (82 mg, 0.45 mmol) and (2R,6S)-4-(tert-butoxycarbonyl)-6-methylmorpholine-2-carboxylic acid (132 mg, 0.54 mmol) and the mixture stirred at room temperature overnight. The mixture was then partitioned between EtOAc and water. The organic layer was then washed successively with saturated aqueous sodium bicarbonate, brine and then dried (MgSO4). The solution was evaporated to dryness in vacuo and the residue purified by flash
to give the title compound (124 mg) as a colourless solid. Crystals suitable for X-ray structure analysis were obtained by slow evaporation of a solution in EtOAc at room temperature.C-bound H atoms were placed in geometrically idealized positions (C—H = 0.93–0.98 Å) and constrained to ride on their parent atoms with Uiso(H) = 1.2–1.5 Ueq(C). Atom H2A was located on difference map and isotropically refined. In the absence of any significant anomalous scatterers in the molecule, attempts to confirm the
by of the in the presence of 1917 sets of Friedel equivalents led to an inconclusive value of 10 (10). Therefore, the Friedel pairs were merged before the final and the was assigned to correspond with that of the known chiral centres in a precursor molecule, which remained unchanged during the synthesis of the title compound.Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of (I) showing the atomic numbering. Displacement ellipsoids are drawn at the 50% probability level. | |
Fig. 2. Schematic representation of the synthesis. |
C24H30N2O4 | F(000) = 880 |
Mr = 410.50 | Dx = 1.207 Mg m−3 |
Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2y | Cell parameters from 2344 reflections |
a = 27.248 (4) Å | θ = 5.7–47.9° |
b = 5.8241 (8) Å | µ = 0.08 mm−1 |
c = 14.275 (2) Å | T = 293 K |
β = 94.192 (3)° | Prismatic, white |
V = 2259.3 (5) Å3 | 0.37 × 0.24 × 0.16 mm |
Z = 4 |
Bruker SMART APEX CCD diffractometer | 1934 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.110 |
Graphite monochromator | θmax = 25.5°, θmin = 2.0° |
ϕ and ω scans | h = −32→27 |
5956 measured reflections | k = −6→7 |
2310 independent reflections | l = −17→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0542P)2] where P = (Fo2 + 2Fc2)/3 |
2310 reflections | (Δ/σ)max = 0.018 |
279 parameters | Δρmax = 0.15 e Å−3 |
1 restraint | Δρmin = −0.23 e Å−3 |
C24H30N2O4 | V = 2259.3 (5) Å3 |
Mr = 410.50 | Z = 4 |
Monoclinic, C2 | Mo Kα radiation |
a = 27.248 (4) Å | µ = 0.08 mm−1 |
b = 5.8241 (8) Å | T = 293 K |
c = 14.275 (2) Å | 0.37 × 0.24 × 0.16 mm |
β = 94.192 (3)° |
Bruker SMART APEX CCD diffractometer | 1934 reflections with I > 2σ(I) |
5956 measured reflections | Rint = 0.110 |
2310 independent reflections |
R[F2 > 2σ(F2)] = 0.048 | 1 restraint |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | Δρmax = 0.15 e Å−3 |
2310 reflections | Δρmin = −0.23 e Å−3 |
279 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.38365 (9) | 0.0550 (5) | −0.09403 (17) | 0.0726 (8) | |
N2 | 0.32924 (10) | 0.1668 (4) | 0.19729 (14) | 0.0582 (7) | |
O1 | 0.36972 (10) | 0.4751 (5) | 0.15139 (14) | 0.0892 (8) | |
O2 | 0.30774 (6) | 0.0299 (3) | 0.02574 (11) | 0.0516 (5) | |
O3 | 0.39908 (8) | 0.0609 (4) | −0.24661 (13) | 0.0740 (6) | |
O4 | 0.43729 (7) | 0.3050 (4) | −0.14171 (13) | 0.0649 (6) | |
C1 | 0.34746 (10) | 0.2991 (5) | 0.13400 (17) | 0.0504 (6) | |
C2 | 0.34143 (9) | 0.2148 (5) | 0.03370 (16) | 0.0484 (6) | |
H2 | 0.3284 | 0.3407 | −0.0063 | 0.058* | |
C3 | 0.39051 (10) | 0.1440 (7) | 0.00143 (19) | 0.0702 (9) | |
H3A | 0.4125 | 0.2750 | 0.0031 | 0.084* | |
H3B | 0.4051 | 0.0268 | 0.0429 | 0.084* | |
C4 | 0.34907 (11) | −0.1318 (6) | −0.1033 (2) | 0.0677 (8) | |
H4A | 0.3621 | −0.2628 | −0.0677 | 0.081* | |
H4B | 0.3443 | −0.1769 | −0.1687 | 0.081* | |
C5 | 0.30039 (10) | −0.0621 (5) | −0.06807 (17) | 0.0529 (7) | |
H5 | 0.2804 | −0.2014 | −0.0645 | 0.064* | |
C6 | 0.27212 (12) | 0.1025 (7) | −0.13283 (19) | 0.0747 (9) | |
H6A | 0.2429 | 0.1509 | −0.1047 | 0.112* | |
H6B | 0.2632 | 0.0278 | −0.1916 | 0.112* | |
H6C | 0.2922 | 0.2339 | −0.1435 | 0.112* | |
C7 | 0.33164 (10) | 0.2209 (5) | 0.29757 (15) | 0.0528 (7) | |
H7 | 0.3432 | 0.3797 | 0.3048 | 0.063* | |
C8 | 0.28101 (10) | 0.2103 (5) | 0.33392 (16) | 0.0512 (6) | |
C9 | 0.25146 (10) | 0.0219 (6) | 0.31751 (19) | 0.0610 (7) | |
H9 | 0.2632 | −0.1026 | 0.2850 | 0.073* | |
C10 | 0.20460 (11) | 0.0133 (7) | 0.3483 (2) | 0.0739 (9) | |
H10 | 0.1847 | −0.1143 | 0.3353 | 0.089* | |
C11 | 0.18741 (13) | 0.1950 (8) | 0.3985 (2) | 0.0795 (10) | |
H11 | 0.1558 | 0.1915 | 0.4192 | 0.095* | |
C12 | 0.21685 (14) | 0.3780 (8) | 0.4174 (2) | 0.0825 (11) | |
H12 | 0.2056 | 0.4985 | 0.4529 | 0.099* | |
C13 | 0.26342 (13) | 0.3900 (6) | 0.38514 (18) | 0.0684 (8) | |
H13 | 0.2829 | 0.5189 | 0.3979 | 0.082* | |
C14 | 0.36812 (9) | 0.0700 (5) | 0.35412 (16) | 0.0486 (6) | |
C15 | 0.38313 (10) | 0.1338 (6) | 0.44504 (18) | 0.0625 (8) | |
H15 | 0.3716 | 0.2702 | 0.4692 | 0.075* | |
C16 | 0.41486 (12) | −0.0017 (8) | 0.5002 (2) | 0.0775 (10) | |
H16 | 0.4245 | 0.0440 | 0.5612 | 0.093* | |
C17 | 0.43244 (11) | −0.2042 (8) | 0.4660 (3) | 0.0787 (10) | |
H17 | 0.4539 | −0.2958 | 0.5033 | 0.094* | |
C18 | 0.41775 (11) | −0.2685 (7) | 0.3760 (2) | 0.0744 (9) | |
H18 | 0.4293 | −0.4051 | 0.3521 | 0.089* | |
C19 | 0.38604 (11) | −0.1329 (6) | 0.32084 (19) | 0.0606 (7) | |
H19 | 0.3765 | −0.1792 | 0.2599 | 0.073* | |
C20 | 0.40627 (10) | 0.1365 (5) | −0.16836 (19) | 0.0562 (7) | |
C21 | 0.47203 (10) | 0.3996 (5) | −0.20592 (19) | 0.0570 (7) | |
C22 | 0.49962 (12) | 0.5747 (6) | −0.1450 (2) | 0.0765 (9) | |
H22A | 0.4769 | 0.6863 | −0.1239 | 0.115* | |
H22B | 0.5235 | 0.6500 | −0.1805 | 0.115* | |
H22C | 0.5160 | 0.4996 | −0.0916 | 0.115* | |
C23 | 0.50568 (12) | 0.2101 (6) | −0.2339 (3) | 0.0787 (10) | |
H23A | 0.5194 | 0.1329 | −0.1786 | 0.118* | |
H23B | 0.5317 | 0.2743 | −0.2674 | 0.118* | |
H23C | 0.4873 | 0.1025 | −0.2735 | 0.118* | |
C24 | 0.44503 (13) | 0.5127 (7) | −0.2886 (2) | 0.0795 (9) | |
H24A | 0.4274 | 0.3987 | −0.3262 | 0.119* | |
H24B | 0.4681 | 0.5892 | −0.3256 | 0.119* | |
H24C | 0.4222 | 0.6228 | −0.2670 | 0.119* | |
H2A | 0.3113 (11) | 0.060 (6) | 0.181 (2) | 0.058 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0724 (14) | 0.096 (2) | 0.0528 (13) | −0.0328 (16) | 0.0287 (11) | −0.0251 (14) |
N2 | 0.0865 (17) | 0.0596 (16) | 0.0294 (10) | −0.0232 (15) | 0.0104 (10) | −0.0025 (11) |
O1 | 0.1344 (19) | 0.0868 (17) | 0.0501 (11) | −0.0546 (17) | 0.0324 (12) | −0.0172 (11) |
O2 | 0.0594 (10) | 0.0633 (12) | 0.0333 (8) | −0.0150 (10) | 0.0120 (7) | 0.0012 (8) |
O3 | 0.0932 (14) | 0.0820 (16) | 0.0498 (11) | −0.0177 (13) | 0.0264 (10) | −0.0213 (11) |
O4 | 0.0692 (11) | 0.0794 (14) | 0.0489 (10) | −0.0184 (12) | 0.0226 (9) | −0.0078 (10) |
C1 | 0.0606 (15) | 0.0540 (16) | 0.0374 (13) | −0.0084 (14) | 0.0102 (11) | 0.0000 (12) |
C2 | 0.0617 (14) | 0.0529 (15) | 0.0318 (12) | −0.0124 (13) | 0.0101 (10) | 0.0041 (12) |
C3 | 0.0651 (16) | 0.104 (3) | 0.0432 (14) | −0.0235 (18) | 0.0182 (12) | −0.0143 (16) |
C4 | 0.0791 (19) | 0.066 (2) | 0.0606 (17) | −0.0091 (17) | 0.0238 (14) | −0.0143 (16) |
C5 | 0.0658 (15) | 0.0556 (17) | 0.0388 (13) | −0.0199 (14) | 0.0129 (11) | −0.0045 (12) |
C6 | 0.086 (2) | 0.091 (2) | 0.0453 (15) | −0.010 (2) | −0.0075 (14) | −0.0075 (17) |
C7 | 0.0807 (17) | 0.0498 (15) | 0.0284 (11) | −0.0124 (14) | 0.0080 (11) | −0.0035 (12) |
C8 | 0.0711 (16) | 0.0536 (16) | 0.0291 (11) | 0.0047 (14) | 0.0055 (11) | 0.0035 (12) |
C9 | 0.0695 (17) | 0.0628 (19) | 0.0515 (15) | 0.0025 (17) | 0.0093 (13) | −0.0056 (14) |
C10 | 0.0677 (18) | 0.091 (2) | 0.0636 (18) | 0.000 (2) | 0.0090 (15) | 0.0064 (19) |
C11 | 0.073 (2) | 0.104 (3) | 0.0630 (19) | 0.024 (2) | 0.0158 (16) | 0.008 (2) |
C12 | 0.104 (3) | 0.088 (3) | 0.0577 (18) | 0.035 (2) | 0.0246 (17) | −0.002 (2) |
C13 | 0.102 (2) | 0.0628 (19) | 0.0417 (14) | 0.0082 (19) | 0.0094 (15) | −0.0034 (15) |
C14 | 0.0553 (13) | 0.0569 (17) | 0.0355 (12) | −0.0131 (13) | 0.0173 (10) | −0.0044 (12) |
C15 | 0.0768 (18) | 0.072 (2) | 0.0391 (13) | −0.0027 (17) | 0.0048 (13) | −0.0101 (14) |
C16 | 0.079 (2) | 0.101 (3) | 0.0518 (17) | −0.007 (2) | −0.0050 (15) | −0.0046 (19) |
C17 | 0.0581 (17) | 0.105 (3) | 0.074 (2) | 0.007 (2) | 0.0088 (15) | 0.018 (2) |
C18 | 0.0694 (18) | 0.078 (2) | 0.079 (2) | 0.0090 (18) | 0.0257 (16) | 0.0008 (19) |
C19 | 0.0711 (17) | 0.0677 (19) | 0.0446 (14) | −0.0044 (16) | 0.0152 (12) | −0.0072 (15) |
C20 | 0.0553 (14) | 0.0636 (17) | 0.0517 (16) | −0.0059 (14) | 0.0183 (12) | −0.0122 (14) |
C21 | 0.0616 (16) | 0.0558 (16) | 0.0564 (15) | 0.0001 (14) | 0.0221 (12) | 0.0089 (14) |
C22 | 0.0780 (19) | 0.074 (2) | 0.079 (2) | −0.0112 (19) | 0.0170 (16) | 0.0076 (19) |
C23 | 0.0762 (19) | 0.067 (2) | 0.097 (3) | 0.0062 (19) | 0.0353 (17) | 0.007 (2) |
C24 | 0.102 (2) | 0.071 (2) | 0.0663 (19) | 0.007 (2) | 0.0086 (17) | 0.0084 (17) |
N1—C20 | 1.352 (4) | C9—H9 | 0.9300 |
N1—C4 | 1.439 (4) | C10—C11 | 1.379 (5) |
N1—C3 | 1.457 (3) | C10—H10 | 0.9300 |
N2—C1 | 1.312 (3) | C11—C12 | 1.349 (6) |
N2—C7 | 1.463 (3) | C11—H11 | 0.9300 |
N2—H2A | 0.81 (3) | C12—C13 | 1.383 (5) |
O1—C1 | 1.207 (4) | C12—H12 | 0.9300 |
O2—C2 | 1.414 (3) | C13—H13 | 0.9300 |
O2—C5 | 1.443 (3) | C14—C19 | 1.376 (4) |
O3—C20 | 1.203 (3) | C14—C15 | 1.383 (3) |
O4—C20 | 1.332 (3) | C15—C16 | 1.375 (5) |
O4—C21 | 1.472 (3) | C15—H15 | 0.9300 |
C1—C2 | 1.511 (3) | C16—C17 | 1.376 (6) |
C2—C3 | 1.503 (4) | C16—H16 | 0.9300 |
C2—H2 | 0.9800 | C17—C18 | 1.369 (5) |
C3—H3A | 0.9700 | C17—H17 | 0.9300 |
C3—H3B | 0.9700 | C18—C19 | 1.376 (4) |
C4—C5 | 1.508 (4) | C18—H18 | 0.9300 |
C4—H4A | 0.9700 | C19—H19 | 0.9300 |
C4—H4B | 0.9700 | C21—C24 | 1.497 (4) |
C5—C6 | 1.504 (4) | C21—C22 | 1.505 (5) |
C5—H5 | 0.9800 | C21—C23 | 1.507 (4) |
C6—H6A | 0.9600 | C22—H22A | 0.9600 |
C6—H6B | 0.9600 | C22—H22B | 0.9600 |
C6—H6C | 0.9600 | C22—H22C | 0.9600 |
C7—C8 | 1.510 (4) | C23—H23A | 0.9600 |
C7—C14 | 1.515 (4) | C23—H23B | 0.9600 |
C7—H7 | 0.9800 | C23—H23C | 0.9600 |
C8—C9 | 1.371 (4) | C24—H24A | 0.9600 |
C8—C13 | 1.382 (4) | C24—H24B | 0.9600 |
C9—C10 | 1.382 (4) | C24—H24C | 0.9600 |
C20—N1—C4 | 121.8 (2) | C9—C10—H10 | 120.2 |
C20—N1—C3 | 125.1 (3) | C12—C11—C10 | 119.4 (3) |
C4—N1—C3 | 113.2 (2) | C12—C11—H11 | 120.3 |
C1—N2—C7 | 123.7 (2) | C10—C11—H11 | 120.3 |
C1—N2—H2A | 120 (2) | C11—C12—C13 | 121.3 (3) |
C7—N2—H2A | 115 (2) | C11—C12—H12 | 119.4 |
C2—O2—C5 | 113.74 (17) | C13—C12—H12 | 119.4 |
C20—O4—C21 | 121.4 (2) | C8—C13—C12 | 120.0 (4) |
O1—C1—N2 | 124.5 (2) | C8—C13—H13 | 120.0 |
O1—C1—C2 | 119.3 (2) | C12—C13—H13 | 120.0 |
N2—C1—C2 | 116.1 (2) | C19—C14—C15 | 117.8 (3) |
O2—C2—C3 | 110.7 (2) | C19—C14—C7 | 123.3 (2) |
O2—C2—C1 | 110.40 (19) | C15—C14—C7 | 118.8 (2) |
C3—C2—C1 | 110.0 (2) | C16—C15—C14 | 120.9 (3) |
O2—C2—H2 | 108.6 | C16—C15—H15 | 119.6 |
C3—C2—H2 | 108.6 | C14—C15—H15 | 119.6 |
C1—C2—H2 | 108.6 | C15—C16—C17 | 120.6 (3) |
N1—C3—C2 | 109.1 (2) | C15—C16—H16 | 119.7 |
N1—C3—H3A | 109.9 | C17—C16—H16 | 119.7 |
C2—C3—H3A | 109.9 | C18—C17—C16 | 118.8 (3) |
N1—C3—H3B | 109.9 | C18—C17—H17 | 120.6 |
C2—C3—H3B | 109.9 | C16—C17—H17 | 120.6 |
H3A—C3—H3B | 108.3 | C17—C18—C19 | 120.6 (3) |
N1—C4—C5 | 110.6 (3) | C17—C18—H18 | 119.7 |
N1—C4—H4A | 109.5 | C19—C18—H18 | 119.7 |
C5—C4—H4A | 109.5 | C18—C19—C14 | 121.3 (3) |
N1—C4—H4B | 109.5 | C18—C19—H19 | 119.4 |
C5—C4—H4B | 109.5 | C14—C19—H19 | 119.4 |
H4A—C4—H4B | 108.1 | O3—C20—O4 | 126.3 (3) |
O2—C5—C6 | 111.3 (2) | O3—C20—N1 | 123.2 (3) |
O2—C5—C4 | 110.1 (2) | O4—C20—N1 | 110.5 (2) |
C6—C5—C4 | 112.9 (2) | O4—C21—C24 | 110.7 (2) |
O2—C5—H5 | 107.4 | O4—C21—C22 | 102.1 (2) |
C6—C5—H5 | 107.4 | C24—C21—C22 | 110.7 (3) |
C4—C5—H5 | 107.4 | O4—C21—C23 | 108.8 (2) |
C5—C6—H6A | 109.5 | C24—C21—C23 | 112.8 (3) |
C5—C6—H6B | 109.5 | C22—C21—C23 | 111.2 (3) |
H6A—C6—H6B | 109.5 | C21—C22—H22A | 109.5 |
C5—C6—H6C | 109.5 | C21—C22—H22B | 109.5 |
H6A—C6—H6C | 109.5 | H22A—C22—H22B | 109.5 |
H6B—C6—H6C | 109.5 | C21—C22—H22C | 109.5 |
N2—C7—C8 | 110.5 (2) | H22A—C22—H22C | 109.5 |
N2—C7—C14 | 112.2 (2) | H22B—C22—H22C | 109.5 |
C8—C7—C14 | 111.9 (2) | C21—C23—H23A | 109.5 |
N2—C7—H7 | 107.3 | C21—C23—H23B | 109.5 |
C8—C7—H7 | 107.3 | H23A—C23—H23B | 109.5 |
C14—C7—H7 | 107.3 | C21—C23—H23C | 109.5 |
C9—C8—C13 | 118.3 (3) | H23A—C23—H23C | 109.5 |
C9—C8—C7 | 120.9 (2) | H23B—C23—H23C | 109.5 |
C13—C8—C7 | 120.8 (3) | C21—C24—H24A | 109.5 |
C8—C9—C10 | 121.3 (3) | C21—C24—H24B | 109.5 |
C8—C9—H9 | 119.4 | H24A—C24—H24B | 109.5 |
C10—C9—H9 | 119.4 | C21—C24—H24C | 109.5 |
C11—C10—C9 | 119.6 (4) | H24A—C24—H24C | 109.5 |
C11—C10—H10 | 120.2 | H24B—C24—H24C | 109.5 |
C7—N2—C1—O1 | 2.9 (5) | C9—C10—C11—C12 | −0.5 (5) |
C7—N2—C1—C2 | −180.0 (2) | C10—C11—C12—C13 | 1.9 (5) |
C5—O2—C2—C3 | −57.3 (3) | C9—C8—C13—C12 | −0.8 (4) |
C5—O2—C2—C1 | −179.4 (2) | C7—C8—C13—C12 | 179.6 (2) |
O1—C1—C2—O2 | −170.2 (3) | C11—C12—C13—C8 | −1.3 (5) |
N2—C1—C2—O2 | 12.4 (3) | N2—C7—C14—C19 | −17.3 (3) |
O1—C1—C2—C3 | 67.3 (4) | C8—C7—C14—C19 | 107.6 (3) |
N2—C1—C2—C3 | −110.0 (3) | N2—C7—C14—C15 | 165.0 (2) |
C20—N1—C3—C2 | 123.2 (3) | C8—C7—C14—C15 | −70.1 (3) |
C4—N1—C3—C2 | −56.1 (4) | C19—C14—C15—C16 | −0.1 (4) |
O2—C2—C3—N1 | 55.5 (3) | C7—C14—C15—C16 | 177.8 (3) |
C1—C2—C3—N1 | 177.8 (3) | C14—C15—C16—C17 | 0.0 (5) |
C20—N1—C4—C5 | −124.0 (3) | C15—C16—C17—C18 | 0.0 (5) |
C3—N1—C4—C5 | 55.3 (4) | C16—C17—C18—C19 | 0.1 (5) |
C2—O2—C5—C6 | −70.7 (3) | C17—C18—C19—C14 | −0.2 (4) |
C2—O2—C5—C4 | 55.4 (3) | C15—C14—C19—C18 | 0.1 (4) |
N1—C4—C5—O2 | −52.7 (3) | C7—C14—C19—C18 | −177.6 (3) |
N1—C4—C5—C6 | 72.4 (3) | C21—O4—C20—O3 | −8.3 (4) |
C1—N2—C7—C8 | 126.8 (3) | C21—O4—C20—N1 | 170.6 (3) |
C1—N2—C7—C14 | −107.5 (3) | C4—N1—C20—O3 | 0.4 (5) |
N2—C7—C8—C9 | 51.2 (3) | C3—N1—C20—O3 | −178.8 (3) |
C14—C7—C8—C9 | −74.6 (3) | C4—N1—C20—O4 | −178.5 (3) |
N2—C7—C8—C13 | −129.2 (3) | C3—N1—C20—O4 | 2.3 (4) |
C14—C7—C8—C13 | 105.0 (3) | C20—O4—C21—C24 | 63.9 (4) |
C13—C8—C9—C10 | 2.1 (4) | C20—O4—C21—C22 | −178.2 (2) |
C7—C8—C9—C10 | −178.2 (2) | C20—O4—C21—C23 | −60.5 (3) |
C8—C9—C10—C11 | −1.5 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19···O1i | 0.93 | 2.54 | 3.332 (4) | 144 |
Symmetry code: (i) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C24H30N2O4 |
Mr | 410.50 |
Crystal system, space group | Monoclinic, C2 |
Temperature (K) | 293 |
a, b, c (Å) | 27.248 (4), 5.8241 (8), 14.275 (2) |
β (°) | 94.192 (3) |
V (Å3) | 2259.3 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.37 × 0.24 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5956, 2310, 1934 |
Rint | 0.110 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.109, 0.96 |
No. of reflections | 2310 |
No. of parameters | 279 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.15, −0.23 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19···O1i | 0.93 | 2.54 | 3.332 (4) | 144 |
Symmetry code: (i) x, y−1, z. |
Acknowledgements
HW is indebted to Professor Jianshu Xie for supporting this project and for critical review of the manuscript. We gratefully acknowledge financial support from the Shanghai Pharmaceutical Group Co. Ltd GX is grateful to the Shanghai Postdoctoral Sustentation Fund, China (grant No. 07R214213) for financial support.
References
Bruker (2002). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dando, T. M. & Perry, C. M. (2004). Drugs, 64, 777–794. Web of Science CrossRef PubMed CAS Google Scholar
Dave, R. & Sasaki, N. A. (2004). Org. Lett. 6, 15–18. Web of Science CrossRef PubMed CAS Google Scholar
Dieckmann, H., Strockmaier, M., Kreuzig, R. & Bahadir, M. (1993). Fesenius' J. Anal. Chem. 345, 784–786. CrossRef CAS Google Scholar
Enders, D., Meyer, O., Raabe, G. & Runsink, J. (1994). Synthesis, pp. 66–72. CrossRef Google Scholar
Hajos, M., Fleishaker, J. C., Filipiak-Reisner, J. K., Brown, M. T. & Wong, E. H. F. (2004). CNS Drug Rev. 10, 23–44. Web of Science PubMed CAS Google Scholar
Hale, J. J., Mills, S. G., MacCoss, M., Finke, P. E., Cascieri, M. A., Sadowski, S., Ber, E., Chicchi, G. G., Kurtz, M., Metzger, J., Eiermann, G., Tsou, N. N., Tattersall, F. D., Rupniak, N. J. M., Williams, A. R., Rycroft, W., Hargreaves, R. & MacIntyre, D. E. (1998). J. Med. Chem. 41, 4607–4614. Web of Science CrossRef CAS PubMed Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Versiani, M., Cassano, G., Perugi, G., Benedetti, A., Mastalli, L., Nardi, A. & Savino, M. (2002). J. Clin. Psychiatry, 63, 31–37. Web of Science CrossRef PubMed CAS Google Scholar
Wijtmans, R., Vink, M. K. S., Schoemaker, H. E., van Delft, F. L., Blaauw, R. H. & Rutjes, F. P. J. T. (2004). Synthesis, pp. 641–662. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Morpholines are an important class of heterocyclic compounds found in many naturally occurring or synthetically organic molecules (Wijtmans et al., 2004). Especially, the morpholine moiety has found widespread use in medicinal chemistry, and many drugs contain this subunit. For example, antidepressant drug Reboxetine (Hajos et al., 2004; Versiani et al., 2002), Aprepitant in combination with other agents to prevent and control nausea and vomiting caused by chemotherapy (Dando & Perry, 2004; Hale et al., 1998). The morpholine skeleton is also used to construct a number of agrochemical fungicides and bactericides, such as Fenpropimorph and tridemorph (Dieckmann et al., 1993). Furthermore, morpholines have been applied as chiral auxiliaries in asymmetric synthesis (Dave & Sasaki, 2004; Enders et al., 1994). Herewith we report the crystal structure of the title compound (I).
In (I) (Fig. 1), the morpholine ring is in a chair conformation. Weak intermolecular C—H···O hydrogen bonds (Table 1) link the molecules related by translation along axis b into chains.