organic compounds
Isonicotinonitrile–4-methylbenzoic acid (1/1)
aSchool of Biological and Chemical Engineering, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu 212003, People's Republic of China
*Correspondence e-mail: cxwchem@yahoo.com.cn
The title structure, C6H4N2·C8H8O2, is built up from an assembly of isonicotinonitrile and 4-methylbenzoic acid molecules and may be regarded as a The two planar molecules [r.m.s. deviations of 0.002 (6) and 0.0028 (11) Å, respectively] are linked by O—H⋯N and C—H⋯O hydrogen bonds. They are nearly coplanar and only twisted from each other by a dihedral angle of 2.48 (6)°. In the crystal, the components are interconnected by slipped π–π stacking [centroid–centroid distance = 3.6797 (11), slippage = 1.304 Å] and intermolecular C—H⋯N interactions.
Related literature
For the structures of related derivatives, see: Fu et al. (2009); Aminabhavi et al. (1986); Dai & Fu (2008a,b). For the graph-set theory, see: Etter et al. (1990); Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811019799/dn2689sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811019799/dn2689Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811019799/dn2689Isup3.cml
isonicotinonitrile and 4-methylbenzoic acid were obtained commercially from Alfa Aesar. The two organoc compounds were solved in the solution (ethanol/water). Colourless block-shaped crystals suitable for X-ray analysis were obtained by slow evaporation of an ethanol/water (2:1 v/v) solution.
All the H atoms attached to C atoms were located into the idealized positions and treated as riding with C–H = 0.93 Å (aromatic) and 0.96 Å (methyl) with Uiso(H)=1.2Ueq(aromatic) and Uiso(H)=1.5Ueq(methyl). The positional parameters of the H atom (O1) was refined freely. In the last cycles of the
it was treated as riding with the H1—O1 = 0.82 (2)Å) and Uiso(H)=1.5Ueq(O).Data collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C6H4N2·C8H8O2 | F(000) = 1008 |
Mr = 240.26 | Dx = 1.315 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3221 reflections |
a = 7.5368 (15) Å | θ = 3.1–27.5° |
b = 13.049 (3) Å | µ = 0.09 mm−1 |
c = 24.749 (5) Å | T = 298 K |
β = 94.20 (3)° | Block, colourless |
V = 2427.5 (8) Å3 | 0.40 × 0.30 × 0.20 mm |
Z = 8 |
Rigaku Mercury2 diffractometer | 2752 independent reflections |
Radiation source: fine-focus sealed tube | 2416 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 1.7° |
profile data from ϕ scans | h = −9→9 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −16→16 |
Tmin = 0.89, Tmax = 1.00 | l = −32→32 |
11659 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0713P)2 + 0.8361P] where P = (Fo2 + 2Fc2)/3 |
2752 reflections | (Δ/σ)max = 0.001 |
165 parameters | Δρmax = 0.28 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C6H4N2·C8H8O2 | V = 2427.5 (8) Å3 |
Mr = 240.26 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 7.5368 (15) Å | µ = 0.09 mm−1 |
b = 13.049 (3) Å | T = 298 K |
c = 24.749 (5) Å | 0.40 × 0.30 × 0.20 mm |
β = 94.20 (3)° |
Rigaku Mercury2 diffractometer | 2752 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 2416 reflections with I > 2σ(I) |
Tmin = 0.89, Tmax = 1.00 | Rint = 0.033 |
11659 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.28 e Å−3 |
2752 reflections | Δρmin = −0.18 e Å−3 |
165 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.43937 (13) | 0.09948 (8) | 0.42051 (4) | 0.0221 (2) | |
N2 | −0.17678 (14) | 0.10802 (9) | 0.29801 (4) | 0.0277 (3) | |
C1 | 0.28921 (16) | 0.13083 (9) | 0.44087 (5) | 0.0230 (3) | |
H1A | 0.2943 | 0.1523 | 0.4768 | 0.028* | |
C2 | 0.12616 (16) | 0.13288 (9) | 0.41101 (5) | 0.0234 (3) | |
H2A | 0.0238 | 0.1547 | 0.4264 | 0.028* | |
C3 | 0.12108 (15) | 0.10120 (8) | 0.35729 (5) | 0.0197 (3) | |
C4 | 0.27629 (16) | 0.06891 (10) | 0.33537 (5) | 0.0246 (3) | |
H4A | 0.2754 | 0.0473 | 0.2995 | 0.030* | |
C5 | 0.43222 (16) | 0.06995 (10) | 0.36861 (5) | 0.0256 (3) | |
H5A | 0.5369 | 0.0491 | 0.3542 | 0.031* | |
C6 | −0.04509 (16) | 0.10367 (9) | 0.32417 (5) | 0.0224 (3) | |
O1 | 0.73800 (11) | 0.10321 (7) | 0.48667 (3) | 0.0269 (2) | |
H1 | 0.6481 | 0.1058 | 0.4659 | 0.040* | |
O2 | 0.55361 (11) | 0.16298 (7) | 0.54594 (4) | 0.0289 (2) | |
C7 | 1.30335 (18) | 0.15462 (10) | 0.69515 (5) | 0.0299 (3) | |
H7A | 1.4122 | 0.1618 | 0.6776 | 0.045* | |
H7B | 1.3066 | 0.0923 | 0.7158 | 0.045* | |
H7C | 1.2898 | 0.2118 | 0.7189 | 0.045* | |
C8 | 1.14836 (17) | 0.15140 (9) | 0.65291 (5) | 0.0234 (3) | |
C9 | 1.16972 (16) | 0.11425 (9) | 0.60095 (5) | 0.0244 (3) | |
H9A | 1.2815 | 0.0926 | 0.5920 | 0.029* | |
C10 | 1.02690 (16) | 0.10904 (9) | 0.56240 (5) | 0.0227 (3) | |
H10A | 1.0432 | 0.0835 | 0.5280 | 0.027* | |
C11 | 0.85908 (15) | 0.14193 (8) | 0.57500 (5) | 0.0195 (3) | |
C12 | 0.83696 (17) | 0.17952 (9) | 0.62657 (5) | 0.0248 (3) | |
H12A | 0.7254 | 0.2016 | 0.6354 | 0.030* | |
C13 | 0.98023 (18) | 0.18425 (10) | 0.66492 (5) | 0.0272 (3) | |
H13A | 0.9636 | 0.2098 | 0.6993 | 0.033* | |
C14 | 0.70140 (15) | 0.13749 (9) | 0.53480 (5) | 0.0203 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0212 (5) | 0.0233 (5) | 0.0215 (5) | −0.0027 (4) | 0.0000 (4) | 0.0016 (4) |
N2 | 0.0229 (5) | 0.0348 (6) | 0.0251 (5) | 0.0010 (4) | −0.0008 (4) | −0.0017 (4) |
C1 | 0.0243 (6) | 0.0241 (6) | 0.0205 (5) | −0.0011 (4) | 0.0001 (4) | −0.0021 (4) |
C2 | 0.0216 (6) | 0.0256 (6) | 0.0229 (6) | 0.0004 (4) | 0.0010 (4) | −0.0021 (4) |
C3 | 0.0201 (6) | 0.0174 (5) | 0.0212 (6) | −0.0025 (4) | −0.0009 (4) | 0.0014 (4) |
C4 | 0.0252 (6) | 0.0292 (6) | 0.0194 (5) | 0.0010 (5) | 0.0008 (4) | −0.0019 (4) |
C5 | 0.0205 (6) | 0.0330 (7) | 0.0234 (6) | 0.0017 (5) | 0.0027 (4) | 0.0007 (5) |
C6 | 0.0233 (6) | 0.0231 (6) | 0.0210 (5) | −0.0005 (4) | 0.0020 (5) | −0.0015 (4) |
O1 | 0.0188 (4) | 0.0422 (5) | 0.0194 (4) | 0.0009 (4) | −0.0011 (3) | −0.0046 (4) |
O2 | 0.0200 (5) | 0.0370 (5) | 0.0295 (5) | 0.0029 (4) | 0.0000 (3) | −0.0074 (4) |
C7 | 0.0301 (7) | 0.0302 (7) | 0.0279 (6) | −0.0046 (5) | −0.0085 (5) | 0.0007 (5) |
C8 | 0.0263 (6) | 0.0208 (6) | 0.0223 (6) | −0.0048 (4) | −0.0037 (5) | 0.0030 (4) |
C9 | 0.0196 (6) | 0.0288 (6) | 0.0249 (6) | −0.0008 (4) | 0.0015 (4) | 0.0019 (5) |
C10 | 0.0217 (6) | 0.0275 (6) | 0.0189 (5) | −0.0023 (5) | 0.0019 (4) | −0.0001 (4) |
C11 | 0.0208 (6) | 0.0177 (5) | 0.0198 (5) | −0.0027 (4) | 0.0009 (4) | 0.0010 (4) |
C12 | 0.0234 (6) | 0.0259 (6) | 0.0253 (6) | 0.0006 (5) | 0.0024 (5) | −0.0032 (5) |
C13 | 0.0320 (7) | 0.0289 (6) | 0.0205 (5) | −0.0012 (5) | −0.0002 (5) | −0.0044 (5) |
C14 | 0.0205 (6) | 0.0186 (5) | 0.0220 (6) | −0.0024 (4) | 0.0018 (4) | 0.0003 (4) |
N1—C1 | 1.3362 (16) | C7—C8 | 1.5100 (17) |
N1—C5 | 1.3384 (16) | C7—H7A | 0.9600 |
N2—C6 | 1.1461 (16) | C7—H7B | 0.9600 |
C1—C2 | 1.3871 (17) | C7—H7C | 0.9600 |
C1—H1A | 0.9300 | C8—C13 | 1.3903 (18) |
C2—C3 | 1.3903 (16) | C8—C9 | 1.3946 (17) |
C2—H2A | 0.9300 | C9—C10 | 1.3866 (17) |
C3—C4 | 1.3903 (17) | C9—H9A | 0.9300 |
C3—C6 | 1.4459 (17) | C10—C11 | 1.3925 (17) |
C4—C5 | 1.3844 (17) | C10—H10A | 0.9300 |
C4—H4A | 0.9300 | C11—C12 | 1.3886 (16) |
C5—H5A | 0.9300 | C11—C14 | 1.4942 (16) |
O1—C14 | 1.3202 (14) | C12—C13 | 1.3858 (18) |
O1—H1 | 0.8200 | C12—H12A | 0.9300 |
O2—C14 | 1.2134 (15) | C13—H13A | 0.9300 |
C1—N1—C5 | 118.32 (10) | H7B—C7—H7C | 109.5 |
N1—C1—C2 | 123.14 (11) | C13—C8—C9 | 118.23 (11) |
N1—C1—H1A | 118.4 | C13—C8—C7 | 120.95 (11) |
C2—C1—H1A | 118.4 | C9—C8—C7 | 120.82 (11) |
C1—C2—C3 | 117.72 (11) | C10—C9—C8 | 121.01 (11) |
C1—C2—H2A | 121.1 | C10—C9—H9A | 119.5 |
C3—C2—H2A | 121.1 | C8—C9—H9A | 119.5 |
C4—C3—C2 | 119.88 (11) | C9—C10—C11 | 120.19 (11) |
C4—C3—C6 | 120.28 (10) | C9—C10—H10A | 119.9 |
C2—C3—C6 | 119.83 (11) | C11—C10—H10A | 119.9 |
C5—C4—C3 | 117.85 (11) | C12—C11—C10 | 119.13 (11) |
C5—C4—H4A | 121.1 | C12—C11—C14 | 118.85 (11) |
C3—C4—H4A | 121.1 | C10—C11—C14 | 122.01 (10) |
N1—C5—C4 | 123.09 (11) | C13—C12—C11 | 120.35 (11) |
N1—C5—H5A | 118.5 | C13—C12—H12A | 119.8 |
C4—C5—H5A | 118.5 | C11—C12—H12A | 119.8 |
N2—C6—C3 | 178.44 (13) | C12—C13—C8 | 121.09 (11) |
C14—O1—H1 | 109.5 | C12—C13—H13A | 119.5 |
C8—C7—H7A | 109.5 | C8—C13—H13A | 119.5 |
C8—C7—H7B | 109.5 | O2—C14—O1 | 123.63 (11) |
H7A—C7—H7B | 109.5 | O2—C14—C11 | 122.45 (10) |
C8—C7—H7C | 109.5 | O1—C14—C11 | 113.91 (10) |
H7A—C7—H7C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.82 | 1.87 | 2.6850 (15) | 175 |
C1—H1A···O2 | 0.93 | 2.51 | 3.1858 (18) | 130 |
C4—H4A···N2i | 0.93 | 2.60 | 3.3700 (18) | 141 |
Symmetry code: (i) −x, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C6H4N2·C8H8O2 |
Mr | 240.26 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 298 |
a, b, c (Å) | 7.5368 (15), 13.049 (3), 24.749 (5) |
β (°) | 94.20 (3) |
V (Å3) | 2427.5 (8) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.40 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Rigaku Mercury2 diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.89, 1.00 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11659, 2752, 2416 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.124, 1.09 |
No. of reflections | 2752 |
No. of parameters | 165 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.28, −0.18 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 for Windows (Farrugia, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.82 | 1.87 | 2.6850 (15) | 175 |
C1—H1A···O2 | 0.93 | 2.51 | 3.1858 (18) | 130 |
C4—H4A···N2i | 0.93 | 2.60 | 3.3700 (18) | 141 |
Symmetry code: (i) −x, y, −z+1/2. |
Cg1 is the centroid of the C8—C13 ring. Cg2 is the centroid of the N1—C5 ring |
CgI | CgJ | CgI···CgJa | CgI···P(J)b | CgJ···P(I)c | Slippage |
Cg1 | Cg2ii | 3.6797 (11) | 3.440 | 3.443 | 1.304 |
Symmetry codes: (ii)3/2-x,1/2-y,1-z Notes: a : Distance between centroids b : Perpendicular distance of CgI on ring plan J c : Perpendicular distance of CgJ on ring plan I Slippage = vertical displacement between ring centroids. |
Acknowledgements
This work was supported by a start-up grant from Jiangsu University of Science and Technology, China.
References
Aminabhavi, T. M., Biradar, N. S. & Patil, S. B. (1986). Inorg. Chim. Acta, 125, 125–128. CrossRef CAS Web of Science Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Dai, W. & Fu, D.-W. (2008a). Acta Cryst. E64, m1016. Web of Science CSD CrossRef IUCr Journals Google Scholar
Dai, W. & Fu, D.-W. (2008b). Acta Cryst. E64, m1017. Web of Science CSD CrossRef IUCr Journals Google Scholar
Etter, M. C., MacDonald, J. C. & Bernstein, J. (1990). Acta Cryst. B46, 256–262. CrossRef CAS Web of Science IUCr Journals Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Fu, D.-W., Ge, J.-Z., Dai, J., Ye, H.-Y. & Qu, Z.-R. (2009). Inorg. Chem. Commun. 12, 994-997. Web of Science CSD CrossRef CAS Google Scholar
Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The amino derivatives have found wide range of applications in material science, such as magnetic, fluorescent and dielectric behaviors. And there has been an increased interest in the preparation of amino co-crystal compounds (Aminabhavi et al., 1986; Dai & Fu 2008a; Dai & Fu 2008b; Fu, et al. 2009). As an extension on the structural characterization, we report here the crystal structure of the title compound isonicotinonitrile 4-methylbenzoic acid.
The asymmetric unit contains an organic isonicotinonitrile molecule and a 4-methylbenzoic acid organic molecule which are linked by a strong O—H···N and a weak C-H···O hydrogen bonds forming a C22(7) ring ( Etter et al., 1990; Bernstein et al., 1995)(Fig. 1). The benzene and pyridine rings are nearly coplanar and only twisted from each other by a dihedral angle of 2.48 (6)°. The geometric parameters of both the organic molecules are within the normal range.
There are intramolecular C-H···N hydrogen bonds and slippest π-π stacking which stabilize the packing (Tab.1 & 2).