organic compounds
7-Chloro-5-cyclopropyl-9-methyl-5H-4,5,6,10-tetraazadibenzo[a,d]cyclohepten-11(10H)-one
aDepartment of Physics, Sri Bhagawan Mahaveer Jain College of Engineering, Jain University, Bangalore 562 112, India, bDepartment of Studies in Chemistry, Manasagangotri, University of Mysore, Mysore 570 006, India, cDepartment of Studies in Physics, Manasagangotri, University of Mysore, Mysore 570 006, India, and dSri Sathya Sai Institute of Higher Learning, Prasanthi Nilayam, 515 134, India
*Correspondence e-mail: mas@physics.uni-mysore.ac.in
In the title compound, C15H13ClN4O, which is a chloro derivative of the drug Nevirapine, the diazepine ring is in a twisted boat conformation. The pyridine rings fused to the diazepine fragment form a dihedral angle of 58.44 (10)° and the molecule adopts a butterfly shape. The molecules are joined via N—H⋯N hydrogen bonding into polymeric chains down the b axis. All weaker C—H⋯O interactions involve the carbonyl O atom as acceptor.
Related literature
For background to the chemistry of azepines, see: Le Count (1996). The title compound is a chloro derivative of the anti-HIV drug nevirapine (systematic name 11-cyclopropyl-4-methyl-5,11-dihydro-6H-dipyrido[3,2-b:2′,3′-e][1,4]diazepin-6-one) and was synthesised as a basic scaffold, see: Matsumoto et al. (1984). We have also synthesized its derivatives and tested for secretory phospholipase A2 with anti-inflammatory activity, see: Thimmegowda et al. (2007). For a related structure, see: Thimmegowda et al. (2008). For ring puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: XPRESS (MacScience, 2002); cell SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009) and ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811018022/gk2369sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811018022/gk2369Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811018022/gk2369Isup3.cml
The title compound was synthesized as per the procedure reported earlier (Matsumoto et al., 1984). After synthesis and purification, the resultant pure product obtained was dissolved in ethyl acetate and was left undisturbed for slow evaporation of the solvent. Brown crystals grew after five days.
H atoms were placed at idealized positions and allowed to ride on their parent atoms with C–H distances in the range 0.93–0.98 Å and N-H distance 0.86 Å; Uiso(H) = 1.2Ueq(carrier atom) for all H atoms.
Data collection: XPRESS (MacScience, 2002); cell
SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009) and ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C15H13ClN4O | F(000) = 1248 |
Mr = 300.74 | Dx = 1.396 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 4721 reflections |
a = 12.7750 (6) Å | θ = 2.5–25.0° |
b = 13.5870 (7) Å | µ = 0.27 mm−1 |
c = 16.4920 (9) Å | T = 293 K |
V = 2862.6 (3) Å3 | Block, brown |
Z = 8 | 0.27 × 0.25 × 0.25 mm |
MacScience DIPLabo 32001 diffractometer | 2155 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.014 |
Graphite monochromator | θmax = 25.0°, θmin = 3.2° |
Detector resolution: 10.0 pixels mm-1 | h = −15→15 |
ω scans | k = −16→16 |
4721 measured reflections | l = −19→19 |
2525 independent reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.114 | w = 1/[σ2(Fo2) + (0.059P)2 + 1.1189P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.013 |
2525 reflections | Δρmax = 0.34 e Å−3 |
192 parameters | Δρmin = −0.39 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0027 (7) |
C15H13ClN4O | V = 2862.6 (3) Å3 |
Mr = 300.74 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 12.7750 (6) Å | µ = 0.27 mm−1 |
b = 13.5870 (7) Å | T = 293 K |
c = 16.4920 (9) Å | 0.27 × 0.25 × 0.25 mm |
MacScience DIPLabo 32001 diffractometer | 2155 reflections with I > 2σ(I) |
4721 measured reflections | Rint = 0.014 |
2525 independent reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.34 e Å−3 |
2525 reflections | Δρmin = −0.39 e Å−3 |
192 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl19 | 0.26118 (5) | 0.13670 (5) | 0.51234 (4) | 0.0776 (3) | |
O21 | 0.00487 (10) | −0.08660 (9) | 0.11274 (8) | 0.0483 (4) | |
N1 | −0.00616 (11) | 0.11150 (10) | 0.29568 (8) | 0.0364 (4) | |
N3 | 0.12574 (12) | 0.11681 (11) | 0.39490 (9) | 0.0434 (5) | |
N8 | 0.07762 (12) | −0.06760 (11) | 0.23540 (9) | 0.0421 (5) | |
N14 | −0.01401 (12) | 0.23835 (11) | 0.19903 (9) | 0.0445 (5) | |
C2 | 0.08540 (13) | 0.07028 (12) | 0.33068 (10) | 0.0360 (5) | |
C4 | 0.21102 (16) | 0.07779 (15) | 0.42695 (12) | 0.0490 (6) | |
C5 | 0.26156 (16) | −0.00449 (16) | 0.39890 (12) | 0.0524 (7) | |
C6 | 0.22027 (15) | −0.05343 (14) | 0.33216 (12) | 0.0462 (6) | |
C7 | 0.12823 (14) | −0.01540 (12) | 0.29831 (10) | 0.0378 (5) | |
C9 | 0.03801 (13) | −0.03110 (13) | 0.16565 (10) | 0.0365 (5) | |
C10 | 0.03435 (13) | 0.07739 (13) | 0.15357 (10) | 0.0371 (5) | |
C11 | 0.04651 (16) | 0.11305 (14) | 0.07545 (11) | 0.0449 (6) | |
C12 | 0.03218 (17) | 0.21156 (15) | 0.05952 (12) | 0.0521 (7) | |
C13 | 0.00047 (17) | 0.27026 (15) | 0.12274 (12) | 0.0530 (7) | |
C15 | 0.00547 (13) | 0.14368 (12) | 0.21449 (10) | 0.0344 (5) | |
C16 | −0.07237 (15) | 0.16871 (13) | 0.34905 (10) | 0.0419 (5) | |
C17 | −0.18729 (17) | 0.15434 (18) | 0.33813 (13) | 0.0600 (7) | |
C18 | −0.13242 (19) | 0.11117 (17) | 0.41005 (13) | 0.0626 (8) | |
C20 | 0.27121 (18) | −0.14459 (17) | 0.29923 (18) | 0.0685 (8) | |
H5 | 0.32220 | −0.02710 | 0.42400 | 0.0630* | |
H8 | 0.07130 | −0.13010 | 0.24230 | 0.0510* | |
H11 | 0.06440 | 0.07030 | 0.03370 | 0.0540* | |
H12 | 0.04350 | 0.23730 | 0.00800 | 0.0630* | |
H13 | −0.01180 | 0.33650 | 0.11200 | 0.0640* | |
H16 | −0.04800 | 0.23440 | 0.36480 | 0.0500* | |
H17A | −0.21030 | 0.10970 | 0.29580 | 0.0720* | |
H17B | −0.23270 | 0.21050 | 0.34720 | 0.0720* | |
H18A | −0.14470 | 0.14120 | 0.46250 | 0.0750* | |
H18B | −0.12240 | 0.04040 | 0.41120 | 0.0750* | |
H20A | 0.33340 | −0.15860 | 0.32980 | 0.1030* | |
H20B | 0.28930 | −0.13450 | 0.24330 | 0.1030* | |
H20C | 0.22350 | −0.19900 | 0.30350 | 0.1030* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl19 | 0.0725 (4) | 0.0946 (5) | 0.0656 (4) | 0.0017 (3) | −0.0270 (3) | −0.0291 (3) |
O21 | 0.0605 (9) | 0.0418 (7) | 0.0425 (7) | 0.0021 (6) | −0.0068 (6) | −0.0094 (6) |
N1 | 0.0424 (8) | 0.0363 (8) | 0.0306 (7) | 0.0038 (6) | 0.0007 (6) | 0.0004 (6) |
N3 | 0.0483 (9) | 0.0435 (9) | 0.0384 (8) | −0.0026 (7) | −0.0034 (7) | −0.0029 (6) |
N8 | 0.0541 (9) | 0.0305 (7) | 0.0417 (8) | −0.0012 (6) | −0.0085 (7) | −0.0020 (6) |
N14 | 0.0589 (9) | 0.0352 (8) | 0.0393 (8) | 0.0042 (7) | 0.0000 (7) | 0.0018 (6) |
C2 | 0.0397 (9) | 0.0355 (9) | 0.0327 (8) | −0.0036 (7) | −0.0003 (7) | 0.0023 (7) |
C4 | 0.0498 (11) | 0.0538 (12) | 0.0435 (10) | −0.0054 (9) | −0.0078 (9) | −0.0036 (9) |
C5 | 0.0459 (11) | 0.0594 (12) | 0.0520 (11) | 0.0021 (9) | −0.0134 (9) | −0.0010 (10) |
C6 | 0.0451 (10) | 0.0427 (10) | 0.0508 (11) | 0.0018 (8) | −0.0051 (8) | 0.0015 (8) |
C7 | 0.0435 (9) | 0.0337 (9) | 0.0363 (9) | −0.0023 (7) | −0.0044 (7) | 0.0027 (7) |
C9 | 0.0378 (9) | 0.0380 (9) | 0.0338 (9) | 0.0012 (7) | 0.0005 (7) | −0.0042 (7) |
C10 | 0.0389 (9) | 0.0388 (9) | 0.0337 (9) | −0.0011 (7) | −0.0017 (7) | −0.0010 (7) |
C11 | 0.0526 (11) | 0.0495 (11) | 0.0326 (9) | −0.0007 (9) | 0.0012 (8) | −0.0032 (8) |
C12 | 0.0684 (13) | 0.0528 (11) | 0.0351 (10) | −0.0018 (10) | 0.0012 (9) | 0.0085 (9) |
C13 | 0.0744 (14) | 0.0393 (11) | 0.0454 (11) | 0.0031 (9) | 0.0005 (10) | 0.0091 (8) |
C15 | 0.0373 (9) | 0.0336 (8) | 0.0324 (8) | −0.0004 (7) | −0.0018 (7) | 0.0000 (7) |
C16 | 0.0513 (10) | 0.0386 (9) | 0.0359 (9) | 0.0038 (8) | 0.0054 (8) | −0.0023 (7) |
C17 | 0.0479 (11) | 0.0705 (14) | 0.0615 (13) | 0.0062 (10) | 0.0079 (10) | −0.0075 (11) |
C18 | 0.0743 (15) | 0.0587 (13) | 0.0549 (13) | 0.0029 (11) | 0.0254 (11) | 0.0067 (10) |
C20 | 0.0592 (13) | 0.0570 (13) | 0.0892 (17) | 0.0176 (11) | −0.0199 (12) | −0.0173 (13) |
Cl19—C4 | 1.742 (2) | C10—C11 | 1.385 (2) |
O21—C9 | 1.229 (2) | C11—C12 | 1.376 (3) |
N1—C2 | 1.420 (2) | C12—C13 | 1.374 (3) |
N1—C15 | 1.416 (2) | C16—C18 | 1.487 (3) |
N1—C16 | 1.447 (2) | C16—C17 | 1.492 (3) |
N3—C2 | 1.337 (2) | C17—C18 | 1.497 (3) |
N3—C4 | 1.322 (3) | C5—H5 | 0.9300 |
N8—C7 | 1.413 (2) | C11—H11 | 0.9300 |
N8—C9 | 1.351 (2) | C12—H12 | 0.9300 |
N14—C13 | 1.344 (2) | C13—H13 | 0.9300 |
N14—C15 | 1.335 (2) | C16—H16 | 0.9800 |
N8—H8 | 0.8600 | C17—H17A | 0.9700 |
C2—C7 | 1.393 (2) | C17—H17B | 0.9700 |
C4—C5 | 1.371 (3) | C18—H18A | 0.9700 |
C5—C6 | 1.390 (3) | C18—H18B | 0.9700 |
C6—C20 | 1.501 (3) | C20—H20A | 0.9600 |
C6—C7 | 1.400 (3) | C20—H20B | 0.9600 |
C9—C10 | 1.488 (2) | C20—H20C | 0.9600 |
C10—C15 | 1.399 (2) | ||
Cl19···H17Bi | 3.1100 | C7···H13iv | 2.9100 |
O21···C12ii | 3.343 (2) | C7···H17Avii | 3.0900 |
O21···C11ii | 3.193 (2) | C13···H8v | 2.7600 |
O21···C20iii | 3.412 (3) | C15···H17A | 3.1000 |
O21···C5iii | 3.308 (2) | C20···H8 | 2.7300 |
O21···H16iv | 2.5200 | H5···H20A | 2.3700 |
O21···H11ii | 2.5800 | H5···H11viii | 2.3900 |
O21···H11 | 2.6100 | H5···O21vii | 2.5400 |
O21···H5iii | 2.5400 | H8···C20 | 2.7300 |
O21···H20Aiii | 2.5800 | H8···H20C | 2.3800 |
N1···N8 | 2.838 (2) | H8···N14iv | 2.1600 |
N3···C18 | 3.308 (3) | H8···C13iv | 2.7600 |
N8···C13iv | 3.365 (3) | H8···H13iv | 2.5600 |
N8···N1 | 2.838 (2) | H8···H16iv | 2.5700 |
N8···N14iv | 2.963 (2) | H11···O21 | 2.6100 |
N14···C17 | 3.386 (3) | H11···H5ix | 2.3900 |
N14···N8v | 2.963 (2) | H11···O21ii | 2.5800 |
N3···H12vi | 2.9200 | H12···N3x | 2.9200 |
N3···H16 | 2.7800 | H13···C7v | 2.9100 |
N8···H20C | 2.8100 | H13···H8v | 2.5600 |
N8···H20B | 2.8600 | H16···N3 | 2.7800 |
N14···H16 | 2.7700 | H16···N14 | 2.7700 |
N14···H8v | 2.1600 | H16···O21v | 2.5200 |
N14···H20Cv | 2.8100 | H16···H8v | 2.5700 |
C5···O21vii | 3.308 (2) | H17A···C15 | 3.1000 |
C7···C13iv | 3.589 (3) | H17A···C7iii | 3.0900 |
C11···O21ii | 3.193 (2) | H17B···Cl19xi | 3.1100 |
C12···O21ii | 3.343 (2) | H18B···C2 | 3.0000 |
C13···N8v | 3.365 (3) | H20A···H5 | 2.3700 |
C13···C7v | 3.589 (3) | H20A···O21vii | 2.5800 |
C17···N14 | 3.386 (3) | H20B···N8 | 2.8600 |
C18···N3 | 3.308 (3) | H20C···N8 | 2.8100 |
C20···O21vii | 3.412 (3) | H20C···H8 | 2.3800 |
C2···H18B | 3.0000 | H20C···N14iv | 2.8100 |
C2—N1—C15 | 114.82 (13) | N1—C16—C18 | 115.50 (16) |
C2—N1—C16 | 116.50 (13) | N1—C16—C17 | 115.56 (15) |
C15—N1—C16 | 118.07 (13) | C17—C16—C18 | 60.35 (14) |
C2—N3—C4 | 116.41 (16) | C16—C17—C18 | 59.67 (14) |
C7—N8—C9 | 127.75 (15) | C16—C18—C17 | 59.98 (14) |
C13—N14—C15 | 117.66 (16) | C4—C5—H5 | 121.00 |
C9—N8—H8 | 116.00 | C6—C5—H5 | 121.00 |
C7—N8—H8 | 116.00 | C10—C11—H11 | 120.00 |
N3—C2—C7 | 123.20 (16) | C12—C11—H11 | 120.00 |
N1—C2—N3 | 116.95 (14) | C11—C12—H12 | 121.00 |
N1—C2—C7 | 119.85 (15) | C13—C12—H12 | 121.00 |
Cl19—C4—C5 | 118.30 (16) | N14—C13—H13 | 118.00 |
Cl19—C4—N3 | 116.24 (15) | C12—C13—H13 | 118.00 |
N3—C4—C5 | 125.46 (18) | N1—C16—H16 | 118.00 |
C4—C5—C6 | 118.59 (19) | C17—C16—H16 | 118.00 |
C5—C6—C7 | 117.25 (17) | C18—C16—H16 | 118.00 |
C7—C6—C20 | 121.62 (18) | C16—C17—H17A | 118.00 |
C5—C6—C20 | 121.12 (19) | C16—C17—H17B | 118.00 |
N8—C7—C6 | 119.44 (15) | C18—C17—H17A | 118.00 |
N8—C7—C2 | 121.41 (15) | C18—C17—H17B | 118.00 |
C2—C7—C6 | 119.04 (16) | H17A—C17—H17B | 115.00 |
O21—C9—C10 | 120.14 (15) | C16—C18—H18A | 118.00 |
O21—C9—N8 | 120.57 (16) | C16—C18—H18B | 118.00 |
N8—C9—C10 | 119.30 (15) | C17—C18—H18A | 118.00 |
C11—C10—C15 | 118.19 (16) | C17—C18—H18B | 118.00 |
C9—C10—C15 | 123.36 (15) | H18A—C18—H18B | 115.00 |
C9—C10—C11 | 117.87 (15) | C6—C20—H20A | 109.00 |
C10—C11—C12 | 120.19 (17) | C6—C20—H20B | 110.00 |
C11—C12—C13 | 117.32 (18) | C6—C20—H20C | 109.00 |
N14—C13—C12 | 124.33 (19) | H20A—C20—H20B | 109.00 |
N1—C15—N14 | 117.29 (14) | H20A—C20—H20C | 110.00 |
N14—C15—C10 | 122.17 (15) | H20B—C20—H20C | 109.00 |
N1—C15—C10 | 120.52 (15) | ||
C15—N1—C2—N3 | 117.40 (16) | N3—C2—C7—N8 | 173.78 (16) |
C15—N1—C2—C7 | −63.2 (2) | N3—C2—C7—C6 | −2.5 (3) |
C16—N1—C2—N3 | −26.7 (2) | Cl19—C4—C5—C6 | 178.23 (15) |
C16—N1—C2—C7 | 152.68 (16) | N3—C4—C5—C6 | −1.3 (3) |
C2—N1—C15—N14 | −121.30 (16) | C4—C5—C6—C7 | −0.6 (3) |
C2—N1—C15—C10 | 59.9 (2) | C4—C5—C6—C20 | −179.2 (2) |
C16—N1—C15—N14 | 22.2 (2) | C5—C6—C7—N8 | −174.00 (17) |
C16—N1—C15—C10 | −156.65 (16) | C5—C6—C7—C2 | 2.4 (3) |
C2—N1—C16—C17 | −139.70 (16) | C20—C6—C7—N8 | 4.6 (3) |
C2—N1—C16—C18 | −72.0 (2) | C20—C6—C7—C2 | −179.04 (18) |
C15—N1—C16—C17 | 77.4 (2) | O21—C9—C10—C11 | −32.9 (2) |
C15—N1—C16—C18 | 145.11 (17) | O21—C9—C10—C15 | 138.19 (18) |
C4—N3—C2—N1 | −179.96 (16) | N8—C9—C10—C11 | 147.41 (17) |
C4—N3—C2—C7 | 0.7 (3) | N8—C9—C10—C15 | −41.5 (2) |
C2—N3—C4—Cl19 | −178.26 (13) | C9—C10—C11—C12 | 172.74 (18) |
C2—N3—C4—C5 | 1.2 (3) | C15—C10—C11—C12 | 1.2 (3) |
C9—N8—C7—C2 | 48.6 (3) | C9—C10—C15—N1 | 10.1 (2) |
C9—N8—C7—C6 | −135.18 (19) | C9—C10—C15—N14 | −168.66 (16) |
C7—N8—C9—O21 | 173.00 (16) | C11—C10—C15—N1 | −178.83 (16) |
C7—N8—C9—C10 | −7.3 (3) | C11—C10—C15—N14 | 2.4 (3) |
C15—N14—C13—C12 | 1.2 (3) | C10—C11—C12—C13 | −3.3 (3) |
C13—N14—C15—N1 | 177.66 (16) | C11—C12—C13—N14 | 2.2 (3) |
C13—N14—C15—C10 | −3.5 (3) | N1—C16—C17—C18 | 106.08 (18) |
N1—C2—C7—N8 | −5.5 (2) | N1—C16—C18—C17 | −106.17 (18) |
N1—C2—C7—C6 | 178.18 (16) |
Symmetry codes: (i) x+1/2, −y+1/2, −z+1; (ii) −x, −y, −z; (iii) x−1/2, y, −z+1/2; (iv) −x, y−1/2, −z+1/2; (v) −x, y+1/2, −z+1/2; (vi) x, −y+1/2, z+1/2; (vii) x+1/2, y, −z+1/2; (viii) −x+1/2, −y, z+1/2; (ix) −x+1/2, −y, z−1/2; (x) x, −y+1/2, z−1/2; (xi) x−1/2, −y+1/2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8···N14iv | 0.86 | 2.16 | 2.963 (2) | 155 |
C5—H5···O21vii | 0.93 | 2.54 | 3.308 (2) | 140 |
C11—H11···O21ii | 0.93 | 2.58 | 3.193 (2) | 124 |
C16—H16···O21v | 0.98 | 2.52 | 3.492 (2) | 171 |
C20—H20A···O21vii | 0.96 | 2.58 | 3.412 (3) | 145 |
Symmetry codes: (ii) −x, −y, −z; (iv) −x, y−1/2, −z+1/2; (v) −x, y+1/2, −z+1/2; (vii) x+1/2, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H13ClN4O |
Mr | 300.74 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 293 |
a, b, c (Å) | 12.7750 (6), 13.5870 (7), 16.4920 (9) |
V (Å3) | 2862.6 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.27 |
Crystal size (mm) | 0.27 × 0.25 × 0.25 |
Data collection | |
Diffractometer | MacScience DIPLabo 32001 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4721, 2525, 2155 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.114, 1.03 |
No. of reflections | 2525 |
No. of parameters | 192 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.39 |
Computer programs: XPRESS (MacScience, 2002), SCALEPACK (Otwinowski & Minor, 1997), DENZO (Otwinowski & Minor, 1997) and SCALEPACK, SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009) and ORTEPII (Johnson, 1976).
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8···N14i | 0.86 | 2.16 | 2.963 (2) | 155 |
C5—H5···O21ii | 0.93 | 2.54 | 3.308 (2) | 140 |
C11—H11···O21iii | 0.93 | 2.58 | 3.193 (2) | 124 |
C16—H16···O21iv | 0.98 | 2.52 | 3.492 (2) | 171 |
C20—H20A···O21ii | 0.96 | 2.58 | 3.412 (3) | 145 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) x+1/2, y, −z+1/2; (iii) −x, −y, −z; (iv) −x, y+1/2, −z+1/2. |
Acknowledgements
The authors are grateful to the DST and the Government of India (project SP/I2/FOO/93) and the University of Mysore for financial assistance. HRM would like to thank the UGC–BRS and the University of Mysore for the awarding of a fellowship.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The investigation of the chemistry of azepines continues to be an active area of heterocyclic chemistry (Le Count, 1996). The title diazepine compound is a chloro derivative of the well known anti-HIV drug Nevirapine. The drug Nevirapine is the first human immunodeficiency virus type 1 (HIV-1) non-nucleoside reverse transcriptase (RT) inhibitor to reach regulatory approval. The title compound has been synthesized as a basic scaffold as reported earlier (Matsumoto et al., 1984). We have also synthesized its derivatives and tested for secretory phospholipase A2 with anti-inflammatory activity (Thimmegowda et al., 2007). We have identified a few derivatives with good activity. In view of this we have crystallized the title compound and finally the structure was confirmed by the X-ray diffraction studies.
A perspective view of the title molecule is shown in Fig. 1. The atoms N1 and N8 deviate -0.4953 (16) Å and -0.2666 (17) Å respectively with respect to the Cremer and Pople plane (Cremer & Pople, 1975) defined by the atoms C7/C9/C10/C15/C2 of the diazepine ring. The diazepine ring in the molecule adopts a twisted boat conformation as indicated by the puckering parameters Q2 = 0.8015 (18) Å, Q3 = 0.1262 (19) Å, ϕ2 = 182.80 (14)°, ϕ3 = 181.4 (9)°, and the total puckering amplitude QT = 0.8111 (18) Å. Chloromethylpyridine and pyridine units are planar with a maximum deviation of -0.015 (2) Å and 0.019 (2) Å for the atoms C7 and C12, respectively. As a result of the twisted boat conformation of the diazepine ring the molecule as a whole adopts a butterfly shape which is essential for the association of the inhibition pocket. The dihedral angle between the least squares planes of the pyridine N3/C4/C5/C6/C7/C2 and the best plane of the seven membered diaazepine ring C7/N8/C9/C10/C15/N1/C2 is 30.23 (9)°, and that between the diazepine ring and the pyridine ring C10/C11/C12/C13/N14/C15 is 28.49 (9)°.
The pyridine and the keto group at C10 and C9 are gauche oriented with respect to each other as indicated by the C11—C10—C9—O21 torsion angle value of 32.8 (3)° . The C15—N1—C16—C17 torsion angle for the cyclopropyl ring of -77.4 (2)° indicates that the cyclopropyl ring is in equatorial position with respect to the diazepine ring. This value is low when compared to the corresponding value of 90.60 (2)° reported earlier (Thimmegowda et al., 2008). The C9–N8 = 1.352 (2) Å bond length in the seven membered ring system is longer than a typical C=N bond (1.28 Å), but shorter than the C–N bond (C–N = 1.47 Å). The bond lengths N1–C15 = 1.416 (2) Å, N1–C2 =1.419 (2) Å, C7–N8 = 1.413 (2) Å indicates π-electron delocalization in the ring. As a result of the difference in the environment, there is a difference in the C–N bond lengths in the diazepine ring (C9–N8 = 1.352 (2)Å and C7–N8 = 1.413 (2) Å).
The structure exhibits intermolecular hydrogen bonds of the N—H···N and C—H···O type. The oxygen atom attatched to the diazepine ring accepts four intermolecular C—H···O hydrogen bonds.