organic compounds
(E,E)-1,2-Bis(2,4,5-trimethoxybenzylidene)hydrazine
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Chemistry and Center of Excellence for Innovation in Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and cCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand
*Correspondence e-mail: hkfun@usm.my
The 20H24N2O6, contains one half-molecule, the complete molecule being generated by a crystallographic inversion centre. The molecule is nearly planar with a dihedral angle between the two benzene rings of 0.03 (4)° and the central C/N/N/C plane making a dihedral angle of 8.59 (7)° with each of its two adjacent benzene rings. The two methoxy groups at the ortho and meta positions are slightly twisted [C—O—C—C torsion angles = 7.23 (12) and 5.73 (13)°], whereas the methoxy group at the para position is almost coplanar with the attached benzene ring [C—O—C—C torsion angle = −2.02 (13)°]. The is stabilized by a weak C—H⋯π interaction.
of the title compound, CRelated literature
For bond-length data, see: Allen et al. (1987). For related structures, see: Fun et al. (2010); Jansrisewangwong et al. (2010); Zhao et al. (2006). For background to and the biological activity of see: Avaji et al. (2009); El-Tabl et al. (2008); Kitaev et al. (1970); Qin et al. (2009); Ramamohan et al. (1995); Rollas & Küçükgüzel (2007). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811019040/is2713sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811019040/is2713Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811019040/is2713Isup3.cml
The title compound was synthesized by mixing a solution (1:2 molar ratio) of hydrazine hydrate (0.097 ml, 2 mmol) and 2,4,5-trimethoxybenzaldehyde (0.785 mg, 4 mmol) in ethanol (20 ml). The resulting solution was refluxed for 5 h, yielding the yellow solid. The resultant solid was filtered off and washed with methanol. Yellow block-shaped single crystals of the title compound suitable for x-ray
were recrystallized from acetone by slow evaporation of the solvent at room temperature over several days, m.p. 523 K (decompose).All H atoms are located from a difference map and refined isotropically [refined distances: C—H = 0.924 (13)–0.995 (12) Å].
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C20H24N2O6 | F(000) = 412 |
Mr = 388.41 | Dx = 1.358 Mg m−3 |
Monoclinic, P21/c | Melting point = 523 decompose–523 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 7.5056 (1) Å | Cell parameters from 2778 reflections |
b = 7.2523 (1) Å | θ = 2.3–30.0° |
c = 17.4489 (2) Å | µ = 0.10 mm−1 |
β = 90.600 (1)° | T = 100 K |
V = 949.74 (2) Å3 | Needle, colorless |
Z = 2 | 0.47 × 0.29 × 0.10 mm |
Bruker APEXII CCD area-detector diffractometer | 2778 independent reflections |
Radiation source: sealed tube | 2384 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
ϕ and ω scans | θmax = 30.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −10→10 |
Tmin = 0.954, Tmax = 0.990 | k = −10→10 |
18099 measured reflections | l = −24→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.113 | All H-atom parameters refined |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0652P)2 + 0.2144P] where P = (Fo2 + 2Fc2)/3 |
2778 reflections | (Δ/σ)max = 0.001 |
175 parameters | Δρmax = 0.45 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C20H24N2O6 | V = 949.74 (2) Å3 |
Mr = 388.41 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.5056 (1) Å | µ = 0.10 mm−1 |
b = 7.2523 (1) Å | T = 100 K |
c = 17.4489 (2) Å | 0.47 × 0.29 × 0.10 mm |
β = 90.600 (1)° |
Bruker APEXII CCD area-detector diffractometer | 2778 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2384 reflections with I > 2σ(I) |
Tmin = 0.954, Tmax = 0.990 | Rint = 0.028 |
18099 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.113 | All H-atom parameters refined |
S = 1.04 | Δρmax = 0.45 e Å−3 |
2778 reflections | Δρmin = −0.22 e Å−3 |
175 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.26607 (9) | 0.49751 (9) | 0.57223 (4) | 0.01763 (16) | |
O2 | 0.36459 (9) | 0.78767 (10) | 0.32476 (4) | 0.02050 (17) | |
O3 | 0.19145 (9) | 0.52720 (10) | 0.25671 (4) | 0.01952 (17) | |
N1 | 0.03148 (10) | 0.06200 (11) | 0.47211 (4) | 0.01607 (17) | |
C1 | 0.16786 (11) | 0.35906 (12) | 0.45749 (5) | 0.01377 (18) | |
C2 | 0.25348 (11) | 0.50724 (13) | 0.49415 (5) | 0.01428 (18) | |
C3 | 0.32155 (11) | 0.65346 (13) | 0.45116 (5) | 0.01573 (18) | |
H3 | 0.3849 (17) | 0.7563 (18) | 0.4767 (7) | 0.017 (3)* | |
C4 | 0.30093 (11) | 0.65370 (13) | 0.37186 (5) | 0.01537 (18) | |
C5 | 0.21005 (12) | 0.50854 (13) | 0.33441 (5) | 0.01493 (18) | |
C6 | 0.14716 (11) | 0.36283 (12) | 0.37708 (5) | 0.01463 (18) | |
H6 | 0.0847 (18) | 0.261 (2) | 0.3529 (8) | 0.027 (3)* | |
C7 | 0.09679 (11) | 0.20862 (13) | 0.50302 (5) | 0.01512 (18) | |
H7 | 0.0952 (17) | 0.2209 (18) | 0.5580 (8) | 0.024 (3)* | |
C8 | 0.33469 (13) | 0.65505 (14) | 0.61202 (6) | 0.0198 (2) | |
H8A | 0.3252 (17) | 0.6258 (19) | 0.6634 (8) | 0.024 (3)* | |
H8B | 0.2642 (17) | 0.767 (2) | 0.5997 (8) | 0.026 (3)* | |
H8C | 0.4583 (18) | 0.6749 (19) | 0.5978 (7) | 0.024 (3)* | |
C9 | 0.45348 (15) | 0.94046 (15) | 0.35983 (6) | 0.0249 (2) | |
H9A | 0.3707 (19) | 1.004 (2) | 0.3925 (8) | 0.034 (4)* | |
H9B | 0.5579 (18) | 0.897 (2) | 0.3891 (8) | 0.031 (3)* | |
H9C | 0.4852 (18) | 1.010 (2) | 0.3165 (8) | 0.028 (3)* | |
C10 | 0.08467 (16) | 0.39153 (16) | 0.21898 (6) | 0.0263 (2) | |
H10A | −0.0319 (16) | 0.3831 (18) | 0.2454 (7) | 0.019 (3)* | |
H10B | 0.1449 (19) | 0.274 (2) | 0.2202 (8) | 0.032 (4)* | |
H10C | 0.0681 (19) | 0.439 (2) | 0.1671 (9) | 0.036 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0217 (3) | 0.0191 (3) | 0.0121 (3) | −0.0045 (3) | −0.0015 (2) | −0.0018 (2) |
O2 | 0.0267 (3) | 0.0158 (3) | 0.0191 (3) | −0.0071 (3) | 0.0024 (3) | 0.0024 (3) |
O3 | 0.0275 (3) | 0.0192 (4) | 0.0119 (3) | −0.0045 (3) | −0.0002 (2) | 0.0015 (2) |
N1 | 0.0200 (3) | 0.0150 (4) | 0.0132 (3) | −0.0027 (3) | 0.0013 (3) | 0.0023 (3) |
C1 | 0.0144 (4) | 0.0136 (4) | 0.0133 (4) | −0.0009 (3) | 0.0004 (3) | 0.0001 (3) |
C2 | 0.0145 (3) | 0.0155 (4) | 0.0128 (4) | −0.0004 (3) | 0.0001 (3) | −0.0010 (3) |
C3 | 0.0159 (4) | 0.0136 (4) | 0.0178 (4) | −0.0020 (3) | 0.0005 (3) | −0.0014 (3) |
C4 | 0.0162 (4) | 0.0129 (4) | 0.0171 (4) | −0.0003 (3) | 0.0024 (3) | 0.0013 (3) |
C5 | 0.0172 (4) | 0.0156 (4) | 0.0121 (4) | −0.0005 (3) | 0.0010 (3) | 0.0004 (3) |
C6 | 0.0166 (4) | 0.0135 (4) | 0.0138 (4) | −0.0018 (3) | 0.0005 (3) | −0.0004 (3) |
C7 | 0.0168 (4) | 0.0164 (4) | 0.0121 (4) | −0.0013 (3) | 0.0001 (3) | 0.0011 (3) |
C8 | 0.0215 (4) | 0.0204 (5) | 0.0173 (4) | −0.0020 (4) | −0.0017 (3) | −0.0057 (3) |
C9 | 0.0301 (5) | 0.0182 (5) | 0.0266 (5) | −0.0096 (4) | 0.0038 (4) | −0.0007 (4) |
C10 | 0.0402 (6) | 0.0241 (5) | 0.0145 (4) | −0.0086 (5) | −0.0043 (4) | −0.0010 (4) |
O1—C2 | 1.3664 (10) | C4—C5 | 1.4112 (12) |
O1—C8 | 1.4301 (11) | C5—C6 | 1.3789 (12) |
O2—C4 | 1.3624 (11) | C6—H6 | 0.970 (14) |
O2—C9 | 1.4279 (12) | C7—H7 | 0.964 (13) |
O3—C5 | 1.3681 (10) | C8—H8A | 0.924 (13) |
O3—C10 | 1.4257 (12) | C8—H8B | 0.991 (14) |
N1—C7 | 1.2870 (12) | C8—H8C | 0.974 (13) |
N1—N1i | 1.4103 (15) | C9—H9A | 0.966 (15) |
C1—C2 | 1.4031 (12) | C9—H9B | 0.981 (14) |
C1—C6 | 1.4102 (12) | C9—H9C | 0.944 (14) |
C1—C7 | 1.4544 (12) | C10—H10A | 0.995 (12) |
C2—C3 | 1.3987 (12) | C10—H10B | 0.967 (16) |
C3—C4 | 1.3906 (12) | C10—H10C | 0.976 (15) |
C3—H3 | 0.988 (13) | ||
C2—O1—C8 | 117.62 (7) | N1—C7—C1 | 122.08 (8) |
C4—O2—C9 | 117.39 (7) | N1—C7—H7 | 119.0 (8) |
C5—O3—C10 | 116.12 (7) | C1—C7—H7 | 118.9 (8) |
C7—N1—N1i | 111.49 (9) | O1—C8—H8A | 104.9 (8) |
C2—C1—C6 | 118.95 (8) | O1—C8—H8B | 111.1 (8) |
C2—C1—C7 | 119.62 (8) | H8A—C8—H8B | 110.6 (11) |
C6—C1—C7 | 121.39 (8) | O1—C8—H8C | 109.5 (8) |
O1—C2—C3 | 123.51 (8) | H8A—C8—H8C | 111.4 (11) |
O1—C2—C1 | 116.21 (8) | H8B—C8—H8C | 109.4 (11) |
C3—C2—C1 | 120.28 (8) | O2—C9—H9A | 108.9 (9) |
C4—C3—C2 | 119.81 (8) | O2—C9—H9B | 110.1 (9) |
C4—C3—H3 | 119.7 (7) | H9A—C9—H9B | 111.1 (12) |
C2—C3—H3 | 120.5 (7) | O2—C9—H9C | 101.2 (9) |
O2—C4—C3 | 124.41 (8) | H9A—C9—H9C | 112.6 (12) |
O2—C4—C5 | 115.05 (8) | H9B—C9—H9C | 112.4 (12) |
C3—C4—C5 | 120.54 (8) | O3—C10—H10A | 108.7 (7) |
O3—C5—C6 | 125.38 (8) | O3—C10—H10B | 109.8 (9) |
O3—C5—C4 | 115.40 (8) | H10A—C10—H10B | 110.4 (12) |
C6—C5—C4 | 119.22 (8) | O3—C10—H10C | 104.5 (9) |
C5—C6—C1 | 121.15 (8) | H10A—C10—H10C | 110.3 (11) |
C5—C6—H6 | 121.1 (8) | H10B—C10—H10C | 112.8 (12) |
C1—C6—H6 | 117.8 (8) | ||
C8—O1—C2—C3 | 7.23 (12) | C10—O3—C5—C4 | −173.90 (8) |
C8—O1—C2—C1 | −173.26 (8) | O2—C4—C5—O3 | −2.95 (12) |
C6—C1—C2—O1 | 178.64 (7) | C3—C4—C5—O3 | 177.39 (8) |
C7—C1—C2—O1 | 0.86 (12) | O2—C4—C5—C6 | 177.39 (8) |
C6—C1—C2—C3 | −1.84 (13) | C3—C4—C5—C6 | −2.26 (13) |
C7—C1—C2—C3 | −179.61 (8) | O3—C5—C6—C1 | −177.86 (8) |
O1—C2—C3—C4 | −179.16 (8) | C4—C5—C6—C1 | 1.76 (13) |
C1—C2—C3—C4 | 1.34 (13) | C2—C1—C6—C5 | 0.27 (13) |
C9—O2—C4—C3 | −2.02 (13) | C7—C1—C6—C5 | 178.00 (8) |
C9—O2—C4—C5 | 178.34 (8) | N1i—N1—C7—C1 | −178.99 (9) |
C2—C3—C4—O2 | −178.90 (8) | C2—C1—C7—N1 | −173.65 (8) |
C2—C3—C4—C5 | 0.72 (13) | C6—C1—C7—N1 | 8.63 (13) |
C10—O3—C5—C6 | 5.73 (13) |
Symmetry code: (i) −x, −y, −z+1. |
Cg1 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8C···Cg1ii | 0.974 (13) | 2.675 (14) | 3.4837 (10) | 140.7 (10) |
Symmetry code: (ii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H24N2O6 |
Mr | 388.41 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 7.5056 (1), 7.2523 (1), 17.4489 (2) |
β (°) | 90.600 (1) |
V (Å3) | 949.74 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.47 × 0.29 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.954, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18099, 2778, 2384 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.113, 1.04 |
No. of reflections | 2778 |
No. of parameters | 175 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.45, −0.22 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8C···Cg1i | 0.974 (13) | 2.675 (14) | 3.4837 (10) | 140.7 (10) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Acknowledgements
PJ thanks the Center of Excellence for Innovation in Chemistry (PERCH-CIC), Commission on Higher Education, Ministry of Education, and the Graduate School, Prince of Songkla University, for financial support. The authors thank the Prince of Songkla University for financial support through the Crystal Materials Research Unit (CMRU) and also thank Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CrossRef Web of Science Google Scholar
Avaji, P. G., Kumar, C. H. V., Patil, S. A., Shivananda, K. N. & Nagaraju, C. (2009). Eur. J. Med. Chem. 44, 3552–3559. Web of Science CrossRef PubMed CAS Google Scholar
Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107. CrossRef CAS Web of Science IUCr Journals Google Scholar
El-Tabl, A. S., El-Saied, F. A., Plass, W. & Al-Hakimi, A. N. (2008). Spectrochim. Acta Part A, 71, 90–99. Google Scholar
Fun, H.-K., Jansrisewangwong, P. & Chantrapromma, S. (2010). Acta Cryst. E66, o2401–o2402. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Jansrisewangwong, P., Chantrapromma, S. & Fun, H.-K. (2010). Acta Cryst. E66, o2170. Web of Science CSD CrossRef IUCr Journals Google Scholar
Kitaev, Y. P., Buzykin, B. I. & Troepolskaya, T. V. (1970). Russ. Chem. Rev. 39, 441–456. CrossRef Google Scholar
Qin, D.-D., Yang, Z.-Y. & Qi, G.-F. (2009). Spectrochim. Acta Part A, 74, 415–420. CrossRef Google Scholar
Ramamohan, L., Shikkaragol, R. K., Angadi, S. D. & Kulkarni, V. H. (1995). Asian J. Pure Appl. Chem. 1, 86. Google Scholar
Rollas, S. & Küçükgüzel, Ş. G. (2007). Molecules, 12, 1910–1939. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Zhao, Z., Feng, F., Guo, G. & Wang, W. (2006). Acta Cryst. E62, o2413–o2414. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Hydrazones, which is a class of compounds containing the >C=N—N=C< (Avaji et al., 2009), have been studied for their fluorescence properties (Qin et al., 2009) and biological activities such as insecticides, antitumor agents, antioxidants (Kitaev et al., 1970), antimicrobial (Ramamohan et al., 1995) and antiviral properties (El-Tabl et al., 2008; Rollas & Küçükgüzel, 2007). We have previously reported the crystal structure of (E,E)-1,2-bis(2,4,6-trimethoxybenzylidene)hydrazine (Fun et al., 2010). In this work, 2,4,5-trimethoxy substituents on the benzene ring was used in order to get information about the effect of trimethoxy substituent positions on the fluorescence property of the compound. Herein we report the synthesis and crystal structure of the title compound (I).
The asymmetric unit of (I) (Fig. 1), C20H24N2O6, contains one half-molecule and the complete molecule is generated by a crystallographic inversion centre -x, -y, 1 - z. The molecule of (I) exists in an E,E configuration with respect to the two C═N double bonds [1.2870 (12) Å] and the torsion angle N1A–N1–C7–C1 = -178.99 (9)°. The molecule is nearly planar with the dihedral angle between the two benzene rings being 0.03 (4)°. Atoms C7/N1/N1A/C7A lie on a same plane [r.m.s 0.000 (1) Å]. This C/N/N/C plane makes a dihedral angle of 8.59 (7)° with each of its two adjacent benzene rings. The three methoxy groups of the 2,4,5-trimethoxyphenyl unit have two different orientations: two methoxy groups at the ortho and meta positions (at atom C2 and C5 positions) are slightly twisted with the attached benzene ring with torsion angles C8–O1–C2–C3 = 7.23 (12)° and C10–O3–C5–C6 = 5.73 (13)° whereas the third one at para position (at atom C4) is co-planarly attached with the torsion angle C9–O2–C4–C3 = -2.02 (13)°. The bond distances are of normal values (Allen et al., 1987) and are comparable with related structures (Fun et al., 2010; Jansrisewangwong et al., 2010; Zhao et al., 2006).
In the crystal structure (Fig. 2), the molecules are arranged into screw chains along the c axis and these chains stacked along the a direction. the molecules are consolidated by C—H···π (Table 1) and π–π interactions with the Cg1···Cg1 distances of 4.6314 (5) Å (symmetry code: -x, 1 - y, 1 - z) and 4.9695 (5) Å (symmetry code: 1 - x, 1 - y, 1 - z). C···C [3.3411 (12)–3.3987 (12) Å] short contacts were observed.