organic compounds
N-(Pyridin-2-ylmethyl)pyridin-2-amine
aDepartment of Food & Nutrition, Kyungnam College of Information and Technology, Busan 616-701, Republic of Korea, and bDepartment of Chemistry and Research Institute of Natural Sciences, Gyeongsang National University, Jinju 660-701, Republic of Korea
*Correspondence e-mail: thkim@gnu.ac.kr, kmpark@gnu.ac.kr
The title compound, C11H11N3, crystallizes with two molecules (A and B) in the The geometries of both molecules are very similar, with the exception of the torsion angles of the inter-ring chains; the values for C—N—C—C are 67.4 (5) and −69.3 (5)° for molecules A and B, respectively. The dihedral angles between the pyridyl ring planes are 84.0 (2) and 83.2 (2)° for molecules A and B, respectively. In the crystal, weak intermolecular N—H⋯N hydrogen bonds and C—H⋯π interactions contribute to the stabilization of the packing.
Related literature
For details of the synthesis, see: Foxon et al. (2002). For the crystal structures of Cu complexes of the title compound, see: Lee et al. (2008).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811016874/wn2432sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811016874/wn2432Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811016874/wn2432Isup3.cml
The title compound was synthesized according to a literature procedure (Foxon et al., 2002). Slow evaporation of a solution in CH3OH gave single crystals suitable for X-ray analysis.
All H atoms except those of the amine groups were positioned geometrically and refined using a riding model, with d(C—H) = 0.95 Å for Csp2—H and 0.99 Å for methylene C—H. H atoms of the amine groups were located in difference electron density maps and then refined using a riding model with N—H = 0.89 Å and 0.93 Å. For all H atoms Uiso(H) = 1.2Ueq(C,N). In the absence of significant
effects, Friedel pairs were merged.Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of the asymmetric unit of the title compound, showing displacement ellipsoids drawn at the 50% probability level. Dashed lines indicate hydrogen bonds | |
Fig. 2. Crystal packing of the title compound with intermolecular N—H···N hydrogen bonds and C—H···π interactions shown as dashed lines. H atoms not involved in intermolecular interactions have been omitted for clarity. Cg1 Cg2 and Cg3 are the centroids of the N4/C12–C16, N2/C7–C11 and N5/C18–C22 rings, respectively. (Symmetry codes: i) x + 1/2, -y + 2, z; ii) x + 1/2, -y + 1, z; iii) x - 1/2, -y + 2, z; iv) x - 1/2, -y + 1, z) |
C11H11N3 | F(000) = 784 |
Mr = 185.23 | Dx = 1.262 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 4097 reflections |
a = 14.5434 (14) Å | θ = 2.3–27.2° |
b = 5.8198 (6) Å | µ = 0.08 mm−1 |
c = 23.045 (2) Å | T = 173 K |
V = 1950.5 (3) Å3 | Block, colorless |
Z = 8 | 0.45 × 0.30 × 0.30 mm |
Bruker APEXII CCD diffractometer | 1814 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.060 |
Graphite monochromator | θmax = 27.0°, θmin = 2.8° |
ϕ and ω scans | h = −18→18 |
11034 measured reflections | k = −7→7 |
2182 independent reflections | l = −21→29 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0449P)2 + 1.1368P] where P = (Fo2 + 2Fc2)/3 |
2182 reflections | (Δ/σ)max < 0.001 |
253 parameters | Δρmax = 0.20 e Å−3 |
1 restraint | Δρmin = −0.26 e Å−3 |
C11H11N3 | V = 1950.5 (3) Å3 |
Mr = 185.23 | Z = 8 |
Orthorhombic, Pca21 | Mo Kα radiation |
a = 14.5434 (14) Å | µ = 0.08 mm−1 |
b = 5.8198 (6) Å | T = 173 K |
c = 23.045 (2) Å | 0.45 × 0.30 × 0.30 mm |
Bruker APEXII CCD diffractometer | 1814 reflections with I > 2σ(I) |
11034 measured reflections | Rint = 0.060 |
2182 independent reflections |
R[F2 > 2σ(F2)] = 0.054 | 1 restraint |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.20 e Å−3 |
2182 reflections | Δρmin = −0.26 e Å−3 |
253 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.4906 (2) | 0.8350 (5) | 0.22165 (14) | 0.0310 (7) | |
N2 | 0.3345 (2) | 0.2870 (6) | 0.38908 (15) | 0.0372 (8) | |
N3 | 0.4145 (3) | 0.5075 (5) | 0.24813 (15) | 0.0324 (8) | |
H3N | 0.3691 | 0.5445 | 0.2242 | 0.039* | |
C1 | 0.5596 (3) | 0.9839 (7) | 0.2290 (2) | 0.0361 (10) | |
H1 | 0.5633 | 1.1100 | 0.2029 | 0.043* | |
C2 | 0.6248 (3) | 0.9682 (8) | 0.2711 (2) | 0.0416 (12) | |
H2 | 0.6728 | 1.0781 | 0.2741 | 0.050* | |
C3 | 0.6183 (3) | 0.7845 (8) | 0.30973 (18) | 0.0398 (10) | |
H3 | 0.6617 | 0.7693 | 0.3403 | 0.048* | |
C4 | 0.5493 (3) | 0.6254 (7) | 0.30356 (17) | 0.0346 (9) | |
H4 | 0.5449 | 0.4978 | 0.3291 | 0.041* | |
C5 | 0.4854 (2) | 0.6557 (6) | 0.25870 (16) | 0.0273 (8) | |
C6 | 0.3857 (3) | 0.3394 (6) | 0.29081 (18) | 0.0332 (9) | |
H6A | 0.4400 | 0.2470 | 0.3021 | 0.040* | |
H6B | 0.3411 | 0.2340 | 0.2723 | 0.040* | |
C7 | 0.3424 (2) | 0.4366 (6) | 0.34538 (18) | 0.0256 (8) | |
C8 | 0.3101 (3) | 0.6580 (6) | 0.3489 (2) | 0.0435 (11) | |
H8 | 0.3184 | 0.7623 | 0.3176 | 0.052* | |
C9 | 0.2650 (4) | 0.7265 (7) | 0.3993 (2) | 0.0528 (13) | |
H9 | 0.2412 | 0.8779 | 0.4026 | 0.063* | |
C10 | 0.2553 (3) | 0.5742 (7) | 0.4439 (2) | 0.0421 (11) | |
H10 | 0.2245 | 0.6160 | 0.4787 | 0.050* | |
C11 | 0.2916 (3) | 0.3591 (8) | 0.43671 (19) | 0.0424 (10) | |
H11 | 0.2857 | 0.2537 | 0.4680 | 0.051* | |
N4 | 0.2551 (2) | 0.6738 (5) | 0.17549 (13) | 0.0287 (7) | |
N5 | 0.4108 (2) | 1.2720 (5) | 0.01448 (14) | 0.0331 (7) | |
N6 | 0.3312 (3) | 1.0014 (5) | 0.14957 (16) | 0.0347 (9) | |
H6N | 0.3770 | 0.9641 | 0.1761 | 0.042* | |
C12 | 0.1866 (3) | 0.5246 (7) | 0.1674 (2) | 0.0336 (10) | |
H12 | 0.1807 | 0.4016 | 0.1943 | 0.040* | |
C13 | 0.1236 (3) | 0.5373 (7) | 0.1227 (2) | 0.0396 (11) | |
H13 | 0.0763 | 0.4260 | 0.1184 | 0.048* | |
C14 | 0.1323 (3) | 0.7189 (8) | 0.08444 (18) | 0.0417 (10) | |
H14 | 0.0906 | 0.7338 | 0.0529 | 0.050* | |
C15 | 0.2011 (3) | 0.8777 (7) | 0.09179 (17) | 0.0359 (9) | |
H15 | 0.2072 | 1.0033 | 0.0657 | 0.043* | |
C16 | 0.2625 (2) | 0.8514 (6) | 0.13870 (17) | 0.0282 (8) | |
C17 | 0.3582 (3) | 1.1827 (6) | 0.11029 (17) | 0.0323 (8) | |
H17A | 0.4007 | 1.2869 | 0.1311 | 0.039* | |
H17B | 0.3027 | 1.2728 | 0.1001 | 0.039* | |
C18 | 0.4040 (2) | 1.1067 (6) | 0.05466 (17) | 0.0255 (8) | |
C19 | 0.4391 (3) | 0.8888 (6) | 0.0460 (2) | 0.0381 (10) | |
H19 | 0.4316 | 0.7733 | 0.0747 | 0.046* | |
C20 | 0.4848 (3) | 0.8417 (7) | −0.0045 (2) | 0.0487 (12) | |
H20 | 0.5108 | 0.6939 | −0.0106 | 0.058* | |
C21 | 0.4930 (4) | 1.0085 (8) | −0.0462 (2) | 0.0458 (12) | |
H21 | 0.5244 | 0.9797 | −0.0816 | 0.055* | |
C22 | 0.4541 (3) | 1.2192 (7) | −0.03478 (18) | 0.0387 (9) | |
H22 | 0.4583 | 1.3345 | −0.0639 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0295 (17) | 0.0376 (17) | 0.0260 (17) | −0.0019 (14) | 0.0012 (13) | 0.0025 (14) |
N2 | 0.043 (2) | 0.0342 (17) | 0.0342 (18) | 0.0037 (15) | −0.0029 (16) | 0.0128 (15) |
N3 | 0.030 (2) | 0.0433 (18) | 0.024 (2) | −0.0028 (14) | 0.0009 (17) | 0.0062 (14) |
C1 | 0.032 (2) | 0.037 (2) | 0.040 (3) | −0.0005 (16) | 0.005 (2) | −0.0010 (18) |
C2 | 0.028 (2) | 0.053 (3) | 0.044 (3) | −0.0048 (19) | 0.002 (2) | −0.008 (2) |
C3 | 0.024 (2) | 0.061 (3) | 0.034 (2) | 0.0052 (18) | −0.0063 (17) | −0.005 (2) |
C4 | 0.0283 (19) | 0.050 (2) | 0.025 (2) | 0.0041 (18) | 0.0005 (16) | 0.0060 (18) |
C5 | 0.0246 (18) | 0.0343 (18) | 0.0230 (18) | 0.0020 (15) | 0.0050 (15) | −0.0028 (16) |
C6 | 0.035 (2) | 0.0266 (17) | 0.038 (2) | −0.0008 (16) | −0.0008 (18) | 0.0007 (18) |
C7 | 0.0192 (17) | 0.0283 (17) | 0.0292 (19) | −0.0044 (14) | −0.0030 (16) | 0.0050 (15) |
C8 | 0.047 (3) | 0.0277 (19) | 0.056 (3) | 0.0024 (18) | 0.016 (2) | 0.014 (2) |
C9 | 0.056 (3) | 0.033 (2) | 0.069 (3) | 0.000 (2) | 0.026 (3) | −0.003 (2) |
C10 | 0.039 (2) | 0.052 (2) | 0.036 (3) | −0.008 (2) | 0.009 (2) | −0.008 (2) |
C11 | 0.043 (2) | 0.055 (2) | 0.029 (2) | 0.001 (2) | 0.0033 (19) | 0.011 (2) |
N4 | 0.0276 (17) | 0.0320 (15) | 0.0265 (17) | 0.0025 (13) | 0.0021 (13) | 0.0006 (13) |
N5 | 0.0383 (18) | 0.0299 (16) | 0.0310 (17) | 0.0081 (14) | −0.0028 (15) | 0.0027 (15) |
N6 | 0.032 (2) | 0.0382 (18) | 0.034 (2) | −0.0037 (14) | −0.0074 (19) | 0.0087 (15) |
C12 | 0.028 (2) | 0.0363 (19) | 0.037 (2) | 0.0048 (16) | 0.009 (2) | −0.0018 (17) |
C13 | 0.025 (2) | 0.051 (2) | 0.044 (3) | 0.0010 (18) | 0.001 (2) | −0.012 (2) |
C14 | 0.027 (2) | 0.067 (3) | 0.031 (2) | 0.0088 (19) | −0.0016 (17) | −0.004 (2) |
C15 | 0.0261 (19) | 0.048 (2) | 0.033 (2) | 0.0044 (17) | −0.0009 (17) | 0.0066 (19) |
C16 | 0.0249 (18) | 0.0361 (18) | 0.0237 (18) | 0.0085 (15) | 0.0019 (15) | 0.0006 (16) |
C17 | 0.035 (2) | 0.0317 (19) | 0.0303 (19) | 0.0053 (16) | 0.0031 (17) | 0.0011 (17) |
C18 | 0.0223 (16) | 0.0235 (16) | 0.0306 (19) | −0.0014 (15) | −0.0085 (16) | 0.0005 (16) |
C19 | 0.034 (2) | 0.0250 (18) | 0.055 (3) | 0.0012 (16) | 0.011 (2) | 0.0082 (19) |
C20 | 0.047 (3) | 0.0262 (19) | 0.073 (3) | 0.0009 (18) | 0.022 (2) | −0.008 (2) |
C21 | 0.042 (3) | 0.052 (2) | 0.043 (3) | −0.0035 (19) | 0.012 (2) | −0.014 (2) |
C22 | 0.045 (2) | 0.046 (2) | 0.0252 (19) | −0.0010 (19) | −0.0057 (19) | 0.0028 (18) |
N1—C1 | 1.336 (5) | N4—C12 | 1.335 (5) |
N1—C5 | 1.350 (5) | N4—C16 | 1.341 (5) |
N2—C11 | 1.331 (6) | N5—C22 | 1.334 (5) |
N2—C7 | 1.337 (5) | N5—C18 | 1.339 (5) |
N3—C5 | 1.365 (5) | N6—C16 | 1.351 (5) |
N3—C6 | 1.449 (5) | N6—C17 | 1.445 (5) |
N3—H3N | 0.8867 | N6—H6N | 0.9301 |
C1—C2 | 1.360 (7) | C12—C13 | 1.382 (6) |
C1—H1 | 0.9500 | C12—H12 | 0.9500 |
C2—C3 | 1.394 (7) | C13—C14 | 1.382 (6) |
C2—H2 | 0.9500 | C13—H13 | 0.9500 |
C3—C4 | 1.373 (6) | C14—C15 | 1.373 (6) |
C3—H3 | 0.9500 | C14—H14 | 0.9500 |
C4—C5 | 1.401 (5) | C15—C16 | 1.410 (5) |
C4—H4 | 0.9500 | C15—H15 | 0.9500 |
C6—C7 | 1.516 (6) | C17—C18 | 1.511 (6) |
C6—H6A | 0.9900 | C17—H17A | 0.9900 |
C6—H6B | 0.9900 | C17—H17B | 0.9900 |
C7—C8 | 1.374 (5) | C18—C19 | 1.381 (5) |
C8—C9 | 1.391 (7) | C19—C20 | 1.367 (6) |
C8—H8 | 0.9500 | C19—H19 | 0.9500 |
C9—C10 | 1.365 (7) | C20—C21 | 1.372 (7) |
C9—H9 | 0.9500 | C20—H20 | 0.9500 |
C10—C11 | 1.368 (6) | C21—C22 | 1.376 (6) |
C10—H10 | 0.9500 | C21—H21 | 0.9500 |
C11—H11 | 0.9500 | C22—H22 | 0.9500 |
C1—N1—C5 | 117.6 (3) | C12—N4—C16 | 118.2 (3) |
C11—N2—C7 | 117.2 (3) | C22—N5—C18 | 117.2 (3) |
C5—N3—C6 | 121.6 (3) | C16—N6—C17 | 123.8 (4) |
C5—N3—H3N | 121.3 | C16—N6—H6N | 120.1 |
C6—N3—H3N | 111.7 | C17—N6—H6N | 112.9 |
N1—C1—C2 | 124.8 (4) | N4—C12—C13 | 124.4 (4) |
N1—C1—H1 | 117.6 | N4—C12—H12 | 117.8 |
C2—C1—H1 | 117.6 | C13—C12—H12 | 117.8 |
C1—C2—C3 | 117.4 (4) | C12—C13—C14 | 117.1 (4) |
C1—C2—H2 | 121.3 | C12—C13—H13 | 121.4 |
C3—C2—H2 | 121.3 | C14—C13—H13 | 121.4 |
C4—C3—C2 | 120.0 (4) | C15—C14—C13 | 120.2 (4) |
C4—C3—H3 | 120.0 | C15—C14—H14 | 119.9 |
C2—C3—H3 | 120.0 | C13—C14—H14 | 119.9 |
C3—C4—C5 | 118.5 (4) | C14—C15—C16 | 118.9 (4) |
C3—C4—H4 | 120.8 | C14—C15—H15 | 120.6 |
C5—C4—H4 | 120.8 | C16—C15—H15 | 120.6 |
N1—C5—N3 | 114.7 (3) | N4—C16—N6 | 116.1 (3) |
N1—C5—C4 | 121.7 (3) | N4—C16—C15 | 121.2 (3) |
N3—C5—C4 | 123.5 (3) | N6—C16—C15 | 122.7 (4) |
N3—C6—C7 | 115.5 (3) | N6—C17—C18 | 115.9 (3) |
N3—C6—H6A | 108.4 | N6—C17—H17A | 108.3 |
C7—C6—H6A | 108.4 | C18—C17—H17A | 108.3 |
N3—C6—H6B | 108.4 | N6—C17—H17B | 108.3 |
C7—C6—H6B | 108.4 | C18—C17—H17B | 108.3 |
H6A—C6—H6B | 107.5 | H17A—C17—H17B | 107.4 |
N2—C7—C8 | 122.5 (4) | N5—C18—C19 | 122.2 (4) |
N2—C7—C6 | 114.7 (3) | N5—C18—C17 | 114.1 (3) |
C8—C7—C6 | 122.8 (4) | C19—C18—C17 | 123.7 (3) |
C7—C8—C9 | 118.6 (4) | C20—C19—C18 | 119.1 (4) |
C7—C8—H8 | 120.7 | C20—C19—H19 | 120.5 |
C9—C8—H8 | 120.7 | C18—C19—H19 | 120.5 |
C10—C9—C8 | 119.4 (4) | C19—C20—C21 | 119.8 (4) |
C10—C9—H9 | 120.3 | C19—C20—H20 | 120.1 |
C8—C9—H9 | 120.3 | C21—C20—H20 | 120.1 |
C9—C10—C11 | 117.6 (4) | C20—C21—C22 | 117.4 (4) |
C9—C10—H10 | 121.2 | C20—C21—H21 | 121.3 |
C11—C10—H10 | 121.2 | C22—C21—H21 | 121.3 |
N2—C11—C10 | 124.7 (4) | N5—C22—C21 | 124.2 (4) |
N2—C11—H11 | 117.7 | N5—C22—H22 | 117.9 |
C10—C11—H11 | 117.7 | C21—C22—H22 | 117.9 |
C5—N1—C1—C2 | 0.0 (6) | N4—C12—C13—C14 | −0.8 (6) |
N1—C1—C2—C3 | −0.8 (7) | C12—C13—C14—C15 | −0.2 (6) |
C1—C2—C3—C4 | 1.5 (6) | C13—C14—C15—C16 | 0.3 (6) |
C2—C3—C4—C5 | −1.3 (6) | C12—N4—C16—N6 | 178.1 (4) |
C1—N1—C5—N3 | −178.8 (4) | C12—N4—C16—C15 | −1.6 (5) |
C1—N1—C5—C4 | 0.2 (5) | C17—N6—C16—N4 | 170.6 (3) |
C6—N3—C5—N1 | −165.2 (3) | C17—N6—C16—C15 | −9.7 (6) |
C6—N3—C5—C4 | 15.8 (6) | C14—C15—C16—N4 | 0.6 (6) |
C3—C4—C5—N1 | 0.5 (6) | C14—C15—C16—N6 | −179.0 (4) |
C3—C4—C5—N3 | 179.3 (4) | C16—N6—C17—C18 | −69.3 (5) |
C5—N3—C6—C7 | 67.4 (5) | C22—N5—C18—C19 | −0.7 (6) |
C11—N2—C7—C8 | 1.5 (6) | C22—N5—C18—C17 | 177.2 (3) |
C11—N2—C7—C6 | −175.8 (3) | N6—C17—C18—N5 | 166.9 (3) |
N3—C6—C7—N2 | −166.2 (3) | N6—C17—C18—C19 | −15.2 (5) |
N3—C6—C7—C8 | 16.5 (5) | N5—C18—C19—C20 | 2.1 (6) |
N2—C7—C8—C9 | −2.0 (7) | C17—C18—C19—C20 | −175.6 (4) |
C6—C7—C8—C9 | 175.1 (4) | C18—C19—C20—C21 | −1.7 (7) |
C7—C8—C9—C10 | 1.0 (8) | C19—C20—C21—C22 | 0.1 (7) |
C8—C9—C10—C11 | 0.4 (7) | C18—N5—C22—C21 | −1.1 (6) |
C7—N2—C11—C10 | 0.0 (7) | C20—C21—C22—N5 | 1.4 (7) |
C9—C10—C11—N2 | −1.0 (7) | C5—N3—C6—C7 | 67.4 (5) |
C16—N4—C12—C13 | 1.7 (6) | C16—N6—C17—C18 | −69.3 (5) |
Cg1, Cg2 and Cg3 are the centroids of the N4/C12–C16, N2/C7–C11 and N5/C18–C22 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3N···N4 | 0.89 | 2.14 | 3.019 (5) | 172 |
N6—H6N···N1 | 0.93 | 2.10 | 3.012 (5) | 168 |
C1—H1···Cg1i | 0.95 | 2.77 | 3.53 | 137 |
C3—H3···Cg2ii | 0.95 | 2.85 | 3.69 | 147 |
C14—H14···Cg3iii | 0.95 | 2.65 | 3.51 | 149 |
Symmetry codes: (i) x+1/2, −y+2, z; (ii) x+1/2, −y+1, z; (iii) x−1/2, −y+2, z. |
Experimental details
Crystal data | |
Chemical formula | C11H11N3 |
Mr | 185.23 |
Crystal system, space group | Orthorhombic, Pca21 |
Temperature (K) | 173 |
a, b, c (Å) | 14.5434 (14), 5.8198 (6), 23.045 (2) |
V (Å3) | 1950.5 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.45 × 0.30 × 0.30 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11034, 2182, 1814 |
Rint | 0.060 |
(sin θ/λ)max (Å−1) | 0.638 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.124, 1.10 |
No. of reflections | 2182 |
No. of parameters | 253 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.26 |
Computer programs: APEX2 (Bruker, 2006), SAINT (Bruker, 2006), SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 1998).
Cg1, Cg2 and Cg3 are the centroids of the N4/C12–C16, N2/C7–C11 and N5/C18–C22 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3N···N4 | 0.89 | 2.14 | 3.019 (5) | 172 |
N6—H6N···N1 | 0.93 | 2.10 | 3.012 (5) | 168 |
C1—H1···Cg1i | 0.95 | 2.77 | 3.53 | 137 |
C3—H3···Cg2ii | 0.95 | 2.85 | 3.69 | 147 |
C14—H14···Cg3iii | 0.95 | 2.65 | 3.51 | 149 |
Symmetry codes: (i) x+1/2, −y+2, z; (ii) x+1/2, −y+1, z; (iii) x−1/2, −y+2, z. |
Acknowledgements
This research was supported by the Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology (No. 2010–0022675).
References
Brandenburg, K. (1998). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2006). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Foxon, S. P., Walter, O. & Schindler, S. (2002). Eur. J. Inorg. Chem. pp. 111–121. CSD CrossRef Google Scholar
Lee, S., Park, S., Kang, Y., Moon, S.-H., Lee, S. S. & Park, K.-M. (2008). Bull. Korean Chem. Soc. 29, 1811–1814. CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound was prepared for use as a multidentate ligand in the formation of metallosupramolecules according to a published literature procedure (Foxon et al., 2002). The crystal structures of Cu complexes of the title compound have already been reported (Lee et al., 2008). However the crystal structure of the free form has not yet been reported.
The title compound (Scheme, Fig. 1) crystallized in the non-centrosymmetric space group Pca21. The asymmetric unit contains two crystallographically independent molecules (A and B). The geometries of both molecules are very similar, with the exception of the torsion angles of the inter-ring chains; the value for C5—N3—C6—C7 is 67.4 (5) ° and for C16—N6—C17—C18 is -69.3 (5) °. The dihedral angles between the pyridyl ring planes are 84.0 (2)° and 83.2 (2) ° for molecules A and B, respectively.
In the crystal structure, the amine groups of both molecules are involved in pair-wise intermolecular N—H···N interactions, leading to the formation of dimers (Table 1, Fig. 1, Fig. 2). Weak intermolecular C—H···π interactions are also present (Fig. 2). These intermolecular interactions contribute to the stabilization of the packing.