metal-organic compounds
Tetrakis(1H-benzimidazole-κN3)(nitrato-κO)copper(II) nitrate
aDepartment of Applied Chemistry, Yuncheng University, Yuncheng, Shanxi 044000, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
In the title salt, [Cu(NO3)(C7H6N2)4]NO3, one nitrate anion is coordinated to the CuII atom, which is also coordinated by the N atoms of four N-heterocycles. The geometry at the metal atom is a square pyramid in which the O atom of the anion occupies the apical position [Cu—O = 2.468 (5) and 2.590 (7) Å in the two independent formula units]. The cation lies on a twofold rotation axis; the coordinated nitrate anion is also disordered about this The lattice anion is also disordered about a twofold rotation axis. In the crystal, the cations are linked to the coordinated and free anions by N—H⋯O hydrogen bonds.
Related literature
For selected CuII adducts of imidazole and benzimidazole, see: Dobrzyńska et al. (2010); McFadden et al. (1975, 1976); Sieroń (2007).
Experimental
Crystal data
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811018885/zs2111sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811018885/zs2111Isup2.hkl
Copper nitrate trihydrate (0.246 g), 1,3-benzimidazole (0.473 g) and water (2 ml) were placed in a 25-ml, Teflon-lined Parr bomb. The bomb was heated at 413 K for 5 days. Blue prismatic crystals were isolated after the bomb was cooled to room temperature over the course of a day.
Carbon-bound H-atoms were placed in calculated positions [C—H = 0.93 Å, Uiso(H) = 1.2Ueq(C)] and were included in the
in the riding model approximation. The aromatic rings were refined as rigid hexagons with 1.39 Å sides. The four nitrate ions were allowed to refine off twofold rotation axes subject to distance restraints of N–O = 1.24±0.01 Å and O···O 2.15 Å. The four-atom nitrate units were restrained to lie on a plane. The anisotropic displacement parameters of the nitrate ions were restrained to be nearly isotropic. The parameter was refined from 1676 Friedel pairs.Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of two independent formula units of [Cu(NO3)(C7H6N2)4] NO3 at the 30% probability level with hydrogen atoms drawn as spheres of arbitrary radius. Symmetry-related benzimidazole ligands are not labeled. |
[Cu(NO3)(C7H6N2)4]NO3 | F(000) = 2712 |
Mr = 660.12 | Dx = 1.481 Mg m−3 |
Orthorhombic, C2221 | Cu Kα radiation, λ = 1.5418 Å |
Hall symbol: C 2c 2 | Cell parameters from 5605 reflections |
a = 15.7181 (2) Å | θ = 2.9–70.5° |
b = 24.9338 (3) Å | µ = 1.56 mm−1 |
c = 15.1048 (2) Å | T = 293 K |
V = 5919.75 (13) Å3 | Prism, blue |
Z = 8 | 0.10 × 0.08 × 0.06 mm |
Agilent Xcalibur Eos Gemini diffractometer | 5038 independent reflections |
Radiation source: Enhance (Cu) X-ray Source | 4779 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.011 |
Detector resolution: 16.0356 pixels mm-1 | θmax = 70.7°, θmin = 3.3° |
ω scans | h = −17→19 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −30→12 |
Tmin = 0.860, Tmax = 0.912 | l = −18→18 |
7285 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.117 | w = 1/[σ2(Fo2) + (0.081P)2 + 2.0279P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
5038 reflections | Δρmax = 0.32 e Å−3 |
431 parameters | Δρmin = −0.31 e Å−3 |
130 restraints | Absolute structure: Flack (1983), 1676 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.05 (3) |
[Cu(NO3)(C7H6N2)4]NO3 | V = 5919.75 (13) Å3 |
Mr = 660.12 | Z = 8 |
Orthorhombic, C2221 | Cu Kα radiation |
a = 15.7181 (2) Å | µ = 1.56 mm−1 |
b = 24.9338 (3) Å | T = 293 K |
c = 15.1048 (2) Å | 0.10 × 0.08 × 0.06 mm |
Agilent Xcalibur Eos Gemini diffractometer | 5038 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 4779 reflections with I > 2σ(I) |
Tmin = 0.860, Tmax = 0.912 | Rint = 0.011 |
7285 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.117 | Δρmax = 0.32 e Å−3 |
S = 1.03 | Δρmin = −0.31 e Å−3 |
5038 reflections | Absolute structure: Flack (1983), 1676 Friedel pairs |
431 parameters | Absolute structure parameter: −0.05 (3) |
130 restraints |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.0000 | 0.417817 (18) | 0.2500 | 0.03722 (14) | |
Cu2 | 0.5000 | 0.38135 (2) | 0.7500 | 0.05537 (17) | |
O1 | −0.0129 (5) | 0.5148 (3) | 0.1902 (6) | 0.0616 (18) | 0.50 |
O2 | −0.0161 (7) | 0.59502 (16) | 0.2397 (10) | 0.101 (3) | 0.50 |
O3 | 0.0386 (5) | 0.5315 (3) | 0.3167 (6) | 0.074 (2) | 0.50 |
O4 | 0.4732 (5) | 0.47882 (18) | 0.7442 (8) | 0.107 (2) | 0.50 |
O5 | 0.4466 (6) | 0.5603 (3) | 0.7658 (10) | 0.156 (4) | 0.50 |
O6 | 0.5717 (4) | 0.5318 (3) | 0.7891 (6) | 0.117 (3) | 0.50 |
O7 | 0.2850 (7) | 0.4949 (5) | 0.4463 (6) | 0.089 (3) | 0.50 |
O8 | 0.1786 (3) | 0.4969 (4) | 0.5351 (5) | 0.110 (3) | 0.50 |
O9 | 0.3011 (5) | 0.5214 (4) | 0.5815 (5) | 0.083 (2) | 0.50 |
O10 | 0.1531 (11) | 0.4740 (12) | 0.9487 (14) | 0.056 (3) | 0.50 |
O11 | 0.2713 (2) | 0.4965 (11) | 1.0107 (14) | 0.064 (3) | 0.50 |
O12 | 0.1518 (13) | 0.5215 (12) | 1.0668 (14) | 0.059 (4) | 0.50 |
N1 | 0.03749 (15) | 0.40674 (10) | 0.37505 (15) | 0.0423 (5) | |
N2 | 0.04470 (17) | 0.42208 (11) | 0.51886 (16) | 0.0509 (6) | |
H2 | 0.0323 | 0.4352 | 0.5714 | 0.061* | |
N3 | 0.12264 (13) | 0.41851 (10) | 0.21267 (16) | 0.0436 (5) | |
N4 | 0.25856 (17) | 0.43865 (13) | 0.2204 (3) | 0.0744 (11) | |
H4 | 0.3059 | 0.4544 | 0.2377 | 0.089* | |
N5 | 0.46012 (19) | 0.37857 (12) | 0.6251 (2) | 0.0603 (7) | |
N6 | 0.4071 (2) | 0.40852 (14) | 0.5002 (2) | 0.0744 (9) | |
H6 | 0.3816 | 0.4302 | 0.4626 | 0.089* | |
N7 | 0.37999 (19) | 0.37880 (11) | 0.7923 (2) | 0.0598 (7) | |
N8 | 0.2594 (2) | 0.40803 (13) | 0.8488 (2) | 0.0708 (8) | |
H8 | 0.2231 | 0.4290 | 0.8766 | 0.085* | |
N9 | 0.0030 (5) | 0.54803 (13) | 0.2490 (8) | 0.0462 (9) | 0.50 |
N10 | 0.4980 (6) | 0.52280 (17) | 0.7649 (6) | 0.059 (3) | 0.50 |
N11 | 0.2553 (4) | 0.5029 (6) | 0.5215 (4) | 0.066 (3) | 0.50 |
N12 | 0.1927 (3) | 0.5001 (13) | 1.0062 (17) | 0.048 (2) | 0.50 |
C1 | 0.0063 (2) | 0.43455 (11) | 0.44316 (18) | 0.0478 (6) | |
H1 | −0.0372 | 0.4597 | 0.4383 | 0.057* | |
C2 | 0.10595 (12) | 0.38578 (8) | 0.50119 (11) | 0.0494 (6) | |
C3 | 0.16641 (15) | 0.35976 (10) | 0.55281 (9) | 0.0660 (9) | |
H3 | 0.1702 | 0.3672 | 0.6130 | 0.079* | |
C4 | 0.22118 (14) | 0.32267 (10) | 0.51443 (14) | 0.0723 (10) | |
H4A | 0.2616 | 0.3053 | 0.5490 | 0.087* | |
C5 | 0.21549 (13) | 0.31161 (9) | 0.42443 (14) | 0.0680 (9) | |
H5 | 0.2521 | 0.2868 | 0.3988 | 0.082* | |
C6 | 0.15502 (13) | 0.33764 (8) | 0.37281 (10) | 0.0515 (7) | |
H6A | 0.1512 | 0.3302 | 0.3126 | 0.062* | |
C7 | 0.10025 (11) | 0.37472 (7) | 0.41119 (11) | 0.0428 (6) | |
C8 | 0.18048 (17) | 0.44833 (12) | 0.2533 (3) | 0.0563 (7) | |
H8A | 0.1687 | 0.4726 | 0.2983 | 0.068* | |
C9 | 0.16669 (11) | 0.38703 (9) | 0.15231 (13) | 0.0509 (7) | |
C10 | 0.13867 (13) | 0.34785 (10) | 0.09369 (15) | 0.0656 (9) | |
H10 | 0.0813 | 0.3389 | 0.0914 | 0.079* | |
C11 | 0.1964 (2) | 0.32205 (10) | 0.03854 (15) | 0.0909 (16) | |
H11 | 0.1777 | 0.2958 | −0.0007 | 0.109* | |
C12 | 0.28222 (19) | 0.33543 (13) | 0.04201 (19) | 0.0989 (18) | |
H12 | 0.3209 | 0.3182 | 0.0051 | 0.119* | |
C13 | 0.31024 (11) | 0.37460 (13) | 0.1006 (2) | 0.109 (2) | |
H13 | 0.3676 | 0.3836 | 0.1029 | 0.131* | |
C14 | 0.25248 (13) | 0.40040 (10) | 0.15578 (17) | 0.0682 (10) | |
C15 | 0.4189 (3) | 0.41740 (16) | 0.5867 (3) | 0.0720 (10) | |
H15 | 0.3998 | 0.4479 | 0.6161 | 0.086* | |
C16 | 0.44165 (15) | 0.36015 (8) | 0.48107 (15) | 0.0637 (8) | |
C17 | 0.44827 (18) | 0.32937 (11) | 0.40466 (12) | 0.0818 (12) | |
H17 | 0.4260 | 0.3420 | 0.3516 | 0.098* | |
C18 | 0.48821 (18) | 0.27966 (11) | 0.40755 (14) | 0.0836 (12) | |
H18 | 0.4926 | 0.2591 | 0.3564 | 0.100* | |
C19 | 0.52152 (16) | 0.26073 (8) | 0.48686 (18) | 0.0764 (11) | |
H19 | 0.5482 | 0.2275 | 0.4888 | 0.092* | |
C20 | 0.51490 (15) | 0.29151 (8) | 0.56328 (14) | 0.0638 (9) | |
H20 | 0.5372 | 0.2788 | 0.6163 | 0.077* | |
C21 | 0.47496 (14) | 0.34122 (8) | 0.56039 (12) | 0.0555 (7) | |
C22 | 0.3423 (3) | 0.41754 (16) | 0.8371 (3) | 0.0691 (9) | |
H22 | 0.3702 | 0.4479 | 0.8581 | 0.083* | |
C23 | 0.24100 (14) | 0.36003 (8) | 0.80981 (14) | 0.0602 (8) | |
C24 | 0.16767 (11) | 0.32924 (11) | 0.80189 (16) | 0.0787 (12) | |
H24 | 0.1166 | 0.3415 | 0.8255 | 0.094* | |
C25 | 0.17062 (13) | 0.28005 (11) | 0.75867 (18) | 0.0788 (10) | |
H25 | 0.1216 | 0.2595 | 0.7534 | 0.095* | |
C26 | 0.24690 (16) | 0.26166 (8) | 0.72338 (16) | 0.0724 (10) | |
H26 | 0.2489 | 0.2288 | 0.6945 | 0.087* | |
C27 | 0.32023 (12) | 0.29245 (8) | 0.73130 (14) | 0.0616 (8) | |
H27 | 0.3713 | 0.2801 | 0.7077 | 0.074* | |
C28 | 0.31728 (11) | 0.34163 (8) | 0.77451 (14) | 0.0550 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0294 (2) | 0.0434 (2) | 0.0389 (2) | 0.000 | −0.0016 (2) | 0.000 |
Cu2 | 0.0546 (3) | 0.0549 (3) | 0.0566 (3) | 0.000 | 0.0062 (4) | 0.000 |
O1 | 0.068 (4) | 0.073 (4) | 0.044 (3) | 0.014 (3) | −0.013 (3) | −0.021 (3) |
O2 | 0.115 (8) | 0.055 (2) | 0.134 (7) | 0.020 (3) | −0.018 (6) | 0.000 (4) |
O3 | 0.086 (5) | 0.091 (5) | 0.044 (3) | 0.008 (4) | −0.009 (4) | −0.006 (3) |
O4 | 0.129 (6) | 0.060 (2) | 0.133 (5) | −0.009 (3) | −0.036 (6) | 0.003 (5) |
O5 | 0.118 (6) | 0.138 (6) | 0.211 (9) | 0.052 (5) | 0.003 (7) | −0.033 (7) |
O6 | 0.061 (4) | 0.142 (6) | 0.147 (6) | −0.025 (4) | 0.007 (4) | 0.027 (5) |
O7 | 0.089 (6) | 0.090 (6) | 0.089 (6) | −0.006 (6) | 0.003 (5) | 0.001 (5) |
O8 | 0.057 (3) | 0.101 (4) | 0.174 (8) | −0.019 (4) | 0.015 (4) | −0.031 (6) |
O9 | 0.063 (4) | 0.095 (5) | 0.090 (5) | −0.007 (3) | 0.019 (4) | 0.011 (4) |
O10 | 0.046 (4) | 0.073 (6) | 0.050 (7) | 0.006 (4) | 0.003 (4) | −0.012 (6) |
O11 | 0.0424 (17) | 0.071 (6) | 0.078 (9) | 0.005 (4) | −0.006 (3) | 0.018 (6) |
O12 | 0.061 (5) | 0.073 (6) | 0.043 (6) | −0.007 (4) | 0.010 (4) | −0.006 (4) |
N1 | 0.0368 (10) | 0.0522 (12) | 0.0380 (10) | 0.0020 (9) | −0.0027 (9) | −0.0038 (9) |
N2 | 0.0533 (14) | 0.0601 (14) | 0.0394 (12) | −0.0063 (12) | 0.0041 (11) | −0.0073 (11) |
N3 | 0.0311 (10) | 0.0538 (12) | 0.0459 (11) | 0.0016 (10) | −0.0018 (9) | 0.0093 (10) |
N4 | 0.0348 (13) | 0.0754 (18) | 0.113 (3) | −0.0051 (12) | −0.0058 (15) | 0.0349 (19) |
N5 | 0.0558 (15) | 0.0634 (15) | 0.0617 (16) | 0.0083 (13) | 0.0050 (14) | 0.0001 (13) |
N6 | 0.0720 (19) | 0.078 (2) | 0.0736 (19) | 0.0117 (17) | −0.0163 (17) | 0.0069 (16) |
N7 | 0.0567 (15) | 0.0606 (15) | 0.0621 (16) | 0.0058 (13) | 0.0081 (13) | −0.0081 (13) |
N8 | 0.075 (2) | 0.0740 (19) | 0.0630 (16) | 0.0228 (16) | 0.0177 (16) | −0.0025 (15) |
N9 | 0.054 (2) | 0.0477 (17) | 0.0371 (15) | −0.017 (5) | −0.0012 (19) | −0.002 (8) |
N10 | 0.052 (2) | 0.058 (2) | 0.069 (7) | 0.016 (4) | 0.019 (4) | −0.007 (3) |
N11 | 0.052 (3) | 0.061 (4) | 0.084 (9) | 0.003 (4) | 0.006 (3) | 0.016 (7) |
N12 | 0.048 (2) | 0.0502 (19) | 0.047 (6) | −0.009 (6) | −0.016 (6) | 0.009 (4) |
C1 | 0.0430 (14) | 0.0548 (13) | 0.0455 (13) | −0.0012 (14) | 0.0056 (14) | −0.0086 (11) |
C2 | 0.0499 (15) | 0.0543 (15) | 0.0441 (14) | −0.0120 (13) | −0.0027 (13) | 0.0022 (12) |
C3 | 0.077 (2) | 0.075 (2) | 0.0459 (16) | −0.0086 (19) | −0.0147 (17) | 0.0073 (16) |
C4 | 0.070 (2) | 0.084 (2) | 0.062 (2) | 0.0121 (19) | −0.0175 (18) | 0.0206 (19) |
C5 | 0.066 (2) | 0.073 (2) | 0.066 (2) | 0.0192 (19) | 0.0028 (17) | 0.0113 (17) |
C6 | 0.0521 (17) | 0.0542 (16) | 0.0483 (15) | 0.0105 (14) | 0.0007 (13) | 0.0039 (13) |
C7 | 0.0389 (13) | 0.0467 (13) | 0.0428 (13) | −0.0043 (11) | −0.0016 (12) | 0.0023 (11) |
C8 | 0.0377 (13) | 0.0582 (15) | 0.0730 (18) | −0.0052 (11) | −0.0081 (16) | 0.0109 (19) |
C9 | 0.0403 (14) | 0.0627 (17) | 0.0498 (15) | 0.0143 (13) | 0.0072 (13) | 0.0207 (14) |
C10 | 0.074 (2) | 0.075 (2) | 0.0479 (16) | 0.0285 (19) | −0.0030 (17) | 0.0040 (16) |
C11 | 0.110 (4) | 0.098 (3) | 0.064 (2) | 0.060 (3) | 0.017 (2) | 0.008 (2) |
C12 | 0.107 (4) | 0.108 (4) | 0.081 (3) | 0.052 (3) | 0.040 (3) | 0.023 (3) |
C13 | 0.055 (2) | 0.127 (4) | 0.145 (5) | 0.043 (3) | 0.049 (3) | 0.080 (4) |
C14 | 0.0476 (17) | 0.078 (2) | 0.079 (2) | 0.0113 (16) | 0.0109 (17) | 0.035 (2) |
C15 | 0.064 (2) | 0.066 (2) | 0.085 (3) | 0.0150 (18) | −0.003 (2) | −0.005 (2) |
C16 | 0.0464 (16) | 0.073 (2) | 0.072 (2) | −0.0007 (15) | −0.0037 (16) | 0.0002 (18) |
C17 | 0.065 (2) | 0.117 (3) | 0.063 (2) | −0.009 (2) | −0.0083 (19) | −0.014 (2) |
C18 | 0.062 (2) | 0.098 (3) | 0.091 (3) | −0.002 (2) | 0.002 (2) | −0.033 (2) |
C19 | 0.060 (2) | 0.069 (2) | 0.100 (3) | −0.0017 (17) | −0.002 (2) | −0.019 (2) |
C20 | 0.057 (2) | 0.0583 (17) | 0.076 (2) | 0.0025 (15) | 0.0054 (16) | 0.0019 (15) |
C21 | 0.0445 (16) | 0.0617 (17) | 0.0604 (17) | −0.0052 (13) | 0.0073 (13) | −0.0039 (15) |
C22 | 0.078 (2) | 0.0638 (19) | 0.066 (2) | 0.0076 (19) | 0.0103 (19) | −0.0075 (17) |
C23 | 0.0575 (19) | 0.078 (2) | 0.0449 (15) | 0.0174 (17) | 0.0030 (14) | 0.0051 (15) |
C24 | 0.0525 (19) | 0.124 (4) | 0.059 (2) | 0.008 (2) | 0.0070 (16) | 0.018 (2) |
C25 | 0.074 (2) | 0.101 (3) | 0.061 (2) | −0.016 (2) | −0.004 (2) | 0.004 (2) |
C26 | 0.083 (2) | 0.079 (2) | 0.0543 (18) | −0.012 (2) | 0.0025 (18) | 0.0043 (16) |
C27 | 0.065 (2) | 0.0661 (19) | 0.0533 (19) | 0.0039 (16) | 0.0013 (15) | −0.0012 (14) |
C28 | 0.0525 (17) | 0.0644 (18) | 0.0481 (15) | 0.0077 (15) | 0.0012 (13) | 0.0038 (13) |
Cu1—N1i | 1.998 (2) | C2—C3 | 1.3900 |
Cu1—N1 | 1.998 (2) | C2—C7 | 1.3900 |
Cu1—N3 | 2.008 (2) | C3—C4 | 1.3900 |
Cu1—N3i | 2.008 (2) | C3—H3 | 0.9300 |
Cu1—O1 | 2.590 (7) | C4—C5 | 1.3900 |
Cu2—N5 | 1.989 (3) | C4—H4A | 0.9300 |
Cu2—N5ii | 1.989 (3) | C5—C6 | 1.3900 |
Cu2—N7ii | 1.993 (3) | C5—H5 | 0.9300 |
Cu2—N7 | 1.993 (3) | C6—C7 | 1.3900 |
Cu2—O4 | 2.468 (5) | C6—H6A | 0.9300 |
O1—N9 | 1.240 (7) | C8—H8A | 0.9300 |
O2—N9 | 1.218 (5) | C9—C10 | 1.3900 |
O3—N9 | 1.236 (9) | C9—C14 | 1.3900 |
O4—N10 | 1.205 (6) | C10—C11 | 1.3900 |
O5—N10 | 1.234 (7) | C10—H10 | 0.9300 |
O6—N10 | 1.237 (8) | C11—C12 | 1.3900 |
O7—N11 | 1.244 (8) | C11—H11 | 0.9300 |
O8—N11 | 1.231 (7) | C12—C13 | 1.3900 |
O9—N11 | 1.246 (8) | C12—H12 | 0.9300 |
O10—N12 | 1.250 (8) | C13—C14 | 1.3900 |
O11—N12 | 1.240 (6) | C13—H13 | 0.9300 |
O12—N12 | 1.239 (8) | C15—H15 | 0.9300 |
N1—C1 | 1.334 (4) | C16—C17 | 1.3900 |
N1—C7 | 1.382 (3) | C16—C21 | 1.3900 |
N2—C1 | 1.330 (4) | C17—C18 | 1.3900 |
N2—C2 | 1.348 (3) | C17—H17 | 0.9300 |
N2—H2 | 0.8800 | C18—C19 | 1.3900 |
N3—C8 | 1.325 (4) | C18—H18 | 0.9300 |
N3—C9 | 1.388 (3) | C19—C20 | 1.3900 |
N4—C8 | 1.346 (4) | C19—H19 | 0.9300 |
N4—C14 | 1.368 (4) | C20—C21 | 1.3900 |
N4—H4 | 0.8800 | C20—H20 | 0.9300 |
N5—C15 | 1.301 (5) | C22—H22 | 0.9300 |
N5—C21 | 1.370 (3) | C23—C24 | 1.3900 |
N6—C15 | 1.338 (6) | C23—C28 | 1.3900 |
N6—C16 | 1.354 (4) | C24—C25 | 1.3900 |
N6—H6 | 0.8800 | C24—H24 | 0.9300 |
N7—C22 | 1.320 (5) | C25—C26 | 1.3900 |
N7—C28 | 1.379 (3) | C25—H25 | 0.9300 |
N8—C22 | 1.337 (5) | C26—C27 | 1.3900 |
N8—C23 | 1.365 (4) | C26—H26 | 0.9300 |
N8—H8 | 0.8800 | C27—C28 | 1.3900 |
C1—H1 | 0.9300 | C27—H27 | 0.9300 |
N1i—Cu1—N1 | 164.10 (14) | C4—C5—H5 | 120.0 |
N1i—Cu1—N3 | 91.08 (10) | C6—C5—H5 | 120.0 |
N1—Cu1—N3 | 89.06 (10) | C7—C6—C5 | 120.0 |
N1i—Cu1—N3i | 89.06 (10) | C7—C6—H6A | 120.0 |
N1—Cu1—N3i | 91.08 (10) | C5—C6—H6A | 120.0 |
N3—Cu1—N3i | 179.02 (14) | N1—C7—C6 | 131.44 (15) |
N1i—Cu1—O1 | 77.06 (17) | N1—C7—C2 | 108.53 (15) |
N1—Cu1—O1 | 118.83 (17) | C6—C7—C2 | 120.0 |
N3—Cu1—O1 | 88.23 (19) | N3—C8—N4 | 110.7 (3) |
N3i—Cu1—O1 | 90.9 (2) | N3—C8—H8A | 124.6 |
N5—Cu2—N5ii | 176.00 (17) | N4—C8—H8A | 124.6 |
N5—Cu2—N7ii | 89.60 (13) | N3—C9—C10 | 131.12 (17) |
N5ii—Cu2—N7ii | 90.27 (13) | N3—C9—C14 | 108.88 (17) |
N5—Cu2—N7 | 90.27 (13) | C10—C9—C14 | 120.0 |
N5ii—Cu2—N7 | 89.60 (13) | C9—C10—C11 | 120.0 |
N7ii—Cu2—N7 | 176.34 (17) | C9—C10—H10 | 120.0 |
N5—Cu2—O4 | 87.0 (3) | C11—C10—H10 | 120.0 |
N5ii—Cu2—O4 | 97.0 (3) | C10—C11—C12 | 120.0 |
N7ii—Cu2—O4 | 100.5 (2) | C10—C11—H11 | 120.0 |
N7—Cu2—O4 | 83.2 (2) | C12—C11—H11 | 120.0 |
N9—O1—Cu1 | 111.0 (5) | C13—C12—C11 | 120.0 |
N10—O4—Cu2 | 146.3 (6) | C13—C12—H12 | 120.0 |
C1—N1—C7 | 105.0 (2) | C11—C12—H12 | 120.0 |
C1—N1—Cu1 | 123.3 (2) | C12—C13—C14 | 120.0 |
C7—N1—Cu1 | 131.62 (17) | C12—C13—H13 | 120.0 |
C1—N2—C2 | 108.1 (2) | C14—C13—H13 | 120.0 |
C1—N2—H2 | 125.9 | N4—C14—C13 | 134.80 (19) |
C2—N2—H2 | 125.9 | N4—C14—C9 | 105.18 (19) |
C8—N3—C9 | 106.2 (2) | C13—C14—C9 | 120.0 |
C8—N3—Cu1 | 122.2 (2) | N5—C15—N6 | 112.4 (4) |
C9—N3—Cu1 | 131.17 (17) | N5—C15—H15 | 123.8 |
C8—N4—C14 | 109.0 (3) | N6—C15—H15 | 123.8 |
C8—N4—H4 | 125.5 | N6—C16—C17 | 134.4 (2) |
C14—N4—H4 | 125.5 | N6—C16—C21 | 105.6 (2) |
C15—N5—C21 | 105.8 (3) | C17—C16—C21 | 120.0 |
C15—N5—Cu2 | 123.6 (3) | C16—C17—C18 | 120.0 |
C21—N5—Cu2 | 130.3 (2) | C16—C17—H17 | 120.0 |
C15—N6—C16 | 107.5 (3) | C18—C17—H17 | 120.0 |
C15—N6—H6 | 126.3 | C19—C18—C17 | 120.0 |
C16—N6—H6 | 126.3 | C19—C18—H18 | 120.0 |
C22—N7—C28 | 105.7 (3) | C17—C18—H18 | 120.0 |
C22—N7—Cu2 | 124.5 (3) | C20—C19—C18 | 120.0 |
C28—N7—Cu2 | 129.45 (19) | C20—C19—H19 | 120.0 |
C22—N8—C23 | 107.8 (3) | C18—C19—H19 | 120.0 |
C22—N8—H8 | 126.1 | C19—C20—C21 | 120.0 |
C23—N8—H8 | 126.1 | C19—C20—H20 | 120.0 |
O2—N9—O3 | 121.8 (8) | C21—C20—H20 | 120.0 |
O2—N9—O1 | 120.7 (9) | N5—C21—C20 | 131.35 (19) |
O3—N9—O1 | 117.5 (5) | N5—C21—C16 | 108.65 (19) |
O4—N10—O5 | 118.7 (9) | C20—C21—C16 | 120.0 |
O4—N10—O6 | 123.0 (7) | N7—C22—N8 | 112.0 (4) |
O5—N10—O6 | 118.2 (7) | N7—C22—H22 | 124.0 |
O8—N11—O7 | 120.0 (7) | N8—C22—H22 | 124.0 |
O8—N11—O9 | 119.3 (7) | N8—C23—C24 | 134.2 (2) |
O7—N11—O9 | 120.4 (7) | N8—C23—C28 | 105.8 (2) |
O11—N12—O12 | 120.5 (10) | C24—C23—C28 | 120.0 |
O11—N12—O10 | 119.7 (10) | C23—C24—C25 | 120.0 |
O12—N12—O10 | 118.6 (6) | C23—C24—H24 | 120.0 |
N2—C1—N1 | 112.0 (3) | C25—C24—H24 | 120.0 |
N2—C1—H1 | 124.0 | C26—C25—C24 | 120.0 |
N1—C1—H1 | 124.0 | C26—C25—H25 | 120.0 |
N2—C2—C3 | 133.68 (17) | C24—C25—H25 | 120.0 |
N2—C2—C7 | 106.31 (17) | C27—C26—C25 | 120.0 |
C3—C2—C7 | 120.0 | C27—C26—H26 | 120.0 |
C2—C3—C4 | 120.0 | C25—C26—H26 | 120.0 |
C2—C3—H3 | 120.0 | C26—C27—C28 | 120.0 |
C4—C3—H3 | 120.0 | C26—C27—H27 | 120.0 |
C3—C4—C5 | 120.0 | C28—C27—H27 | 120.0 |
C3—C4—H4A | 120.0 | N7—C28—C27 | 131.33 (18) |
C5—C4—H4A | 120.0 | N7—C28—C23 | 108.66 (18) |
C4—C5—C6 | 120.0 | C27—C28—C23 | 120.0 |
N1i—Cu1—O1—N9 | 177.7 (5) | Cu1—N3—C8—N4 | 175.3 (2) |
N1—Cu1—O1—N9 | −2.8 (5) | C14—N4—C8—N3 | −0.6 (4) |
N3—Cu1—O1—N9 | −90.8 (4) | C8—N3—C9—C10 | 178.5 (2) |
N3i—Cu1—O1—N9 | 88.9 (4) | Cu1—N3—C9—C10 | 5.7 (3) |
N5—Cu2—O4—N10 | −139.8 (18) | C8—N3—C9—C14 | −2.2 (3) |
N5ii—Cu2—O4—N10 | 40.8 (18) | Cu1—N3—C9—C14 | −174.97 (16) |
N7ii—Cu2—O4—N10 | −50.8 (18) | N3—C9—C10—C11 | 179.3 (2) |
N7—Cu2—O4—N10 | 129.6 (18) | C14—C9—C10—C11 | 0.0 |
N1i—Cu1—N1—C1 | −136.0 (2) | C9—C10—C11—C12 | 0.0 |
N3—Cu1—N1—C1 | 133.4 (2) | C10—C11—C12—C13 | 0.0 |
N3i—Cu1—N1—C1 | −45.7 (2) | C11—C12—C13—C14 | 0.0 |
O1—Cu1—N1—C1 | 45.9 (3) | C8—N4—C14—C13 | −179.2 (2) |
N1i—Cu1—N1—C7 | 49.0 (2) | C8—N4—C14—C9 | −0.8 (3) |
N3—Cu1—N1—C7 | −41.7 (2) | C12—C13—C14—N4 | 178.3 (3) |
N3i—Cu1—N1—C7 | 139.3 (2) | C12—C13—C14—C9 | 0.0 |
O1—Cu1—N1—C7 | −129.1 (3) | N3—C9—C14—N4 | 1.8 (2) |
N1i—Cu1—N3—C8 | 146.8 (2) | C10—C9—C14—N4 | −178.7 (2) |
N1—Cu1—N3—C8 | −49.1 (2) | N3—C9—C14—C13 | −179.4 (2) |
O1—Cu1—N3—C8 | 69.8 (3) | C10—C9—C14—C13 | 0.0 |
N1i—Cu1—N3—C9 | −41.4 (2) | C21—N5—C15—N6 | −1.3 (5) |
N1—Cu1—N3—C9 | 122.7 (2) | Cu2—N5—C15—N6 | 173.2 (3) |
O1—Cu1—N3—C9 | −118.4 (3) | C16—N6—C15—N5 | 1.2 (5) |
N7ii—Cu2—N5—C15 | −115.3 (3) | C15—N6—C16—C17 | 178.9 (3) |
N7—Cu2—N5—C15 | 68.3 (3) | C15—N6—C16—C21 | −0.5 (4) |
O4—Cu2—N5—C15 | −14.8 (4) | N6—C16—C17—C18 | −179.4 (3) |
N7ii—Cu2—N5—C21 | 57.7 (3) | C21—C16—C17—C18 | 0.0 |
N7—Cu2—N5—C21 | −118.6 (3) | C16—C17—C18—C19 | 0.0 |
O4—Cu2—N5—C21 | 158.2 (4) | C17—C18—C19—C20 | 0.0 |
N5—Cu2—N7—C22 | −116.5 (3) | C18—C19—C20—C21 | 0.0 |
N5ii—Cu2—N7—C22 | 67.5 (3) | C15—N5—C21—C20 | −178.8 (3) |
O4—Cu2—N7—C22 | −29.6 (4) | Cu2—N5—C21—C20 | 7.2 (4) |
N5—Cu2—N7—C28 | 55.6 (3) | C15—N5—C21—C16 | 0.9 (3) |
N5ii—Cu2—N7—C28 | −120.4 (3) | Cu2—N5—C21—C16 | −173.1 (2) |
O4—Cu2—N7—C28 | 142.5 (4) | C19—C20—C21—N5 | 179.8 (3) |
Cu1—O1—N9—O2 | −165.0 (7) | C19—C20—C21—C16 | 0.0 |
Cu1—O1—N9—O3 | 15.0 (7) | N6—C16—C21—N5 | −0.3 (3) |
Cu2—O4—N10—O5 | −159.8 (14) | C17—C16—C21—N5 | −179.8 (2) |
Cu2—O4—N10—O6 | 17 (2) | N6—C16—C21—C20 | 179.6 (2) |
C2—N2—C1—N1 | 2.0 (3) | C17—C16—C21—C20 | 0.0 |
C7—N1—C1—N2 | −0.2 (3) | C28—N7—C22—N8 | −0.5 (4) |
Cu1—N1—C1—N2 | −176.4 (2) | Cu2—N7—C22—N8 | 173.2 (3) |
C1—N2—C2—C3 | 178.3 (2) | C23—N8—C22—N7 | 0.3 (4) |
C1—N2—C2—C7 | −2.8 (3) | C22—N8—C23—C24 | 178.5 (2) |
N2—C2—C3—C4 | 178.8 (3) | C22—N8—C23—C28 | 0.0 (3) |
C7—C2—C3—C4 | 0.0 | N8—C23—C24—C25 | −178.3 (3) |
C2—C3—C4—C5 | 0.0 | C28—C23—C24—C25 | 0.0 |
C3—C4—C5—C6 | 0.0 | C23—C24—C25—C26 | 0.0 |
C4—C5—C6—C7 | 0.0 | C24—C25—C26—C27 | 0.0 |
C1—N1—C7—C6 | −179.5 (2) | C25—C26—C27—C28 | 0.0 |
Cu1—N1—C7—C6 | −3.8 (3) | C22—N7—C28—C27 | −178.4 (2) |
C1—N1—C7—C2 | −1.6 (2) | Cu2—N7—C28—C27 | 8.3 (4) |
Cu1—N1—C7—C2 | 174.14 (17) | C22—N7—C28—C23 | 0.5 (3) |
C5—C6—C7—N1 | 177.7 (2) | Cu2—N7—C28—C23 | −172.7 (2) |
C5—C6—C7—C2 | 0.0 | C26—C27—C28—N7 | 178.8 (3) |
N2—C2—C7—N1 | 2.7 (2) | C26—C27—C28—C23 | 0.0 |
C3—C2—C7—N1 | −178.2 (2) | N8—C23—C28—N7 | −0.3 (2) |
N2—C2—C7—C6 | −179.1 (2) | C24—C23—C28—N7 | −179.1 (2) |
C3—C2—C7—C6 | 0.0 | N8—C23—C28—C27 | 178.7 (2) |
C9—N3—C8—N4 | 1.7 (4) | C24—C23—C28—C27 | 0.0 |
Symmetry codes: (i) −x, y, −z+1/2; (ii) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1iii | 0.88 | 2.21 | 3.069 (9) | 167 |
N2—H2···O3iv | 0.88 | 1.89 | 2.742 (9) | 164 |
N4—H4···O5iv | 0.88 | 2.24 | 2.964 (9) | 139 |
N4—H4···O6v | 0.88 | 2.10 | 2.955 (7) | 163 |
N6—H6···O7 | 0.88 | 2.23 | 2.998 (14) | 146 |
N8—H8···O10 | 0.88 | 1.91 | 2.79 (2) | 173 |
N8—H8···O12vi | 0.88 | 1.87 | 2.75 (3) | 175 |
Symmetry codes: (iii) −x, −y+1, z+1/2; (iv) x, −y+1, −z+1; (v) −x+1, −y+1, z−1/2; (vi) x, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Cu(NO3)(C7H6N2)4]NO3 |
Mr | 660.12 |
Crystal system, space group | Orthorhombic, C2221 |
Temperature (K) | 293 |
a, b, c (Å) | 15.7181 (2), 24.9338 (3), 15.1048 (2) |
V (Å3) | 5919.75 (13) |
Z | 8 |
Radiation type | Cu Kα |
µ (mm−1) | 1.56 |
Crystal size (mm) | 0.10 × 0.08 × 0.06 |
Data collection | |
Diffractometer | Agilent Xcalibur Eos Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.860, 0.912 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7285, 5038, 4779 |
Rint | 0.011 |
(sin θ/λ)max (Å−1) | 0.612 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.117, 1.03 |
No. of reflections | 5038 |
No. of parameters | 431 |
No. of restraints | 130 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.31 |
Absolute structure | Flack (1983), 1676 Friedel pairs |
Absolute structure parameter | −0.05 (3) |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1i | 0.88 | 2.21 | 3.069 (9) | 167 |
N2—H2···O3ii | 0.88 | 1.89 | 2.742 (9) | 164 |
N4—H4···O5ii | 0.88 | 2.24 | 2.964 (9) | 139 |
N4—H4···O6iii | 0.88 | 2.10 | 2.955 (7) | 163 |
N6—H6···O7 | 0.88 | 2.23 | 2.998 (14) | 146 |
N8—H8···O10 | 0.88 | 1.91 | 2.79 (2) | 173 |
N8—H8···O12iv | 0.88 | 1.87 | 2.75 (3) | 175 |
Symmetry codes: (i) −x, −y+1, z+1/2; (ii) x, −y+1, −z+1; (iii) −x+1, −y+1, z−1/2; (iv) x, −y+1, −z+2. |
Acknowledgements
We thank Yuncheng University and the University of Malaya for supporting this study.
References
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Whereas the coordination sphere of the copper(II) ion (and probably most first-row transition metal ions) readily accomodates four to six imidazole ligands, the space sphere is not large enough to fit a similar number of the related benzimidazole ligands. In the copper nitrate–tetrakis(imidazole) adduct, the nitrate ion is involved in coordination (McFadden et al., 1976) but in the hexakis(imidazole) adduct, the nitrate ion is not (McFadden et al., 1975). The tetrakis(benzimidazole)copper species has been reported for the perchlorate (Dobrzyńska et al., 2010) and the sulfate (Sierón, 2007) only. These two, as well the present nitrate (Scheme I), have the CuII atom in a square pyramidal geometry but with the square pyramid being distorted because the ligand crowds out the donor atom of the anion.
In the crystal of the salt, Cu(NO3)(C7H6N2)4.NO3, one nitrate anion is coordinated to the CuII atom, which is also coordinated by the N atoms of four N-heterocycles (Fig. 1). The geometry at the metal atom is a square pyramid in which the O atom of the anion occupies the apical position [Cu–O 2.468 (5), 2.590 (7) Å in the two independent formula units]. The coordinated and lattice nitrates are disordered about this symmetry element. The disorder, which requires space for the anions to rattle around, probably accounts for the somewhat large solvent-accessible voids. Nevertheless, the cations interact with the anions through N–H···O hydrogen bonds (Table 1).