metal-organic compounds
Poly[(μ5-3,5-dinitrobenzoato)rubidium]
aXi'an Medical University, Department of Pharmacy, Hanguang Road No.137, Xi'an 710021, Shaanxi, People's Republic of China
*Correspondence e-mail: miaoyanqing66@163.com
The 7H3N2O6)]n, comprises an Rb cation and a 3,5-dinitrobenzoate anion. The Rb cation is eight-coordinated by O atoms from five 3,5-dinitrobenzoate anions. On the other hand, each 3,5-dinitrobenzoate anion links five Rb cations with the carboxylate groups as μ3-bridging. The metal atom is firstly linked by the carboxylate groups into a chain along the c-axis direction, which is further linked by bonds between the Rb and nitro O atoms, giving a three-dimensional framework.
of the title compound, [Rb(CRelated literature
For 3,5-dinitrobenzoate complexes, see: Askarinejad et al. (2007); Madej et al. (2007). For Rb—O bond lengths, see: Cametti et al. (2005).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811023026/go2012sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811023026/go2012Isup2.hkl
3,5-dinitrobenzoic acid and RbOH were commercially available and used without further purification. To asolution of 10 mmol 3,5-dinitrobenzoic acid in 30 ml bidistilled water, a solution of 10 mmol RbOH in 20 ml bidistilled water was added dropwise at room temperature. After vigorous stirring for 1 h, the resulting solution was then evaporated to a volume of about 15 ml in vacuum and filtered hot. The filtrate was then set aside for crystallization at room temperature. Three weeks later, colorless prism crystals of the titlecompound suitable for X-ray determination were isolated.
Carbon-bound H atoms were placed at calculated positions and were treated as riding on the parent C atoms with C – H = 0.93 Å, and with Uiso(H) = 1.2 Ueq(C).
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Rb(C7H3N2O6)] | F(000) = 576 |
Mr = 296.58 | Dx = 2.034 Mg m−3 |
Monoclinic, I2/a | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -I 2ya | Cell parameters from 1610 reflections |
a = 7.2789 (15) Å | θ = 3.0–25.4° |
b = 18.072 (4) Å | µ = 5.13 mm−1 |
c = 7.3652 (14) Å | T = 293 K |
β = 91.70 (3)° | Prism, colorless |
V = 968.4 (3) Å3 | 0.64 × 0.40 × 0.14 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 896 independent reflections |
Radiation source: fine-focus sealed tube | 760 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.053 |
ϕ and ω scans | θmax = 25.3°, θmin = 3.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
Tmin = 0.396, Tmax = 1.000 | k = −21→20 |
4663 measured reflections | l = −8→7 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0418P)2] where P = (Fo2 + 2Fc2)/3 |
896 reflections | (Δ/σ)max = 0.001 |
75 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.55 e Å−3 |
[Rb(C7H3N2O6)] | V = 968.4 (3) Å3 |
Mr = 296.58 | Z = 4 |
Monoclinic, I2/a | Mo Kα radiation |
a = 7.2789 (15) Å | µ = 5.13 mm−1 |
b = 18.072 (4) Å | T = 293 K |
c = 7.3652 (14) Å | 0.64 × 0.40 × 0.14 mm |
β = 91.70 (3)° |
Bruker SMART CCD diffractometer | 896 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 760 reflections with I > 2σ(I) |
Tmin = 0.396, Tmax = 1.000 | Rint = 0.053 |
4663 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.29 e Å−3 |
896 reflections | Δρmin = −0.55 e Å−3 |
75 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Rb1 | 0.2500 | 0.54657 (2) | 0.5000 | 0.0557 (2) | |
C1 | 0.7500 | 0.8732 (3) | 0.5000 | 0.0493 (11) | |
H1A | 0.7500 | 0.9246 | 0.5000 | 0.059* | |
C2 | 0.6036 (4) | 0.83316 (17) | 0.5606 (4) | 0.0451 (8) | |
C3 | 0.5991 (4) | 0.75684 (17) | 0.5597 (4) | 0.0421 (7) | |
H3A | 0.4961 | 0.7316 | 0.5986 | 0.050* | |
C4 | 0.7500 | 0.7185 (2) | 0.5000 | 0.0387 (10) | |
C5 | 0.7500 | 0.6342 (2) | 0.5000 | 0.0398 (10) | |
N1 | 0.4460 (5) | 0.87295 (16) | 0.6344 (4) | 0.0595 (8) | |
O1 | 0.6019 (3) | 0.60328 (12) | 0.5293 (4) | 0.0649 (7) | |
O2 | 0.3212 (4) | 0.83742 (15) | 0.6978 (4) | 0.0696 (7) | |
O3 | 0.4500 (5) | 0.94073 (15) | 0.6317 (5) | 0.0913 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Rb1 | 0.0317 (3) | 0.0382 (3) | 0.0985 (4) | 0.000 | 0.0213 (2) | 0.000 |
C1 | 0.066 (3) | 0.040 (2) | 0.043 (3) | 0.000 | 0.004 (2) | 0.000 |
C2 | 0.0482 (19) | 0.0444 (17) | 0.0429 (17) | 0.0112 (15) | 0.0053 (14) | 0.0032 (14) |
C3 | 0.0381 (17) | 0.0441 (16) | 0.0441 (17) | 0.0020 (15) | 0.0020 (13) | 0.0032 (14) |
C4 | 0.035 (2) | 0.042 (2) | 0.039 (2) | 0.000 | −0.0038 (18) | 0.000 |
C5 | 0.028 (2) | 0.035 (2) | 0.056 (3) | 0.000 | −0.0009 (19) | 0.000 |
N1 | 0.068 (2) | 0.0532 (18) | 0.0576 (18) | 0.0181 (16) | 0.0117 (15) | 0.0056 (15) |
O1 | 0.0359 (13) | 0.0414 (12) | 0.118 (2) | −0.0037 (11) | 0.0118 (13) | 0.0012 (13) |
O2 | 0.0555 (16) | 0.0686 (17) | 0.0860 (18) | 0.0089 (13) | 0.0222 (14) | −0.0045 (14) |
O3 | 0.113 (3) | 0.0515 (15) | 0.112 (2) | 0.0326 (16) | 0.049 (2) | 0.0202 (16) |
Rb1—O1 | 2.761 (2) | C1—C2 | 1.374 (4) |
Rb1—O1i | 2.925 (2) | C1—C2iii | 1.374 (4) |
Rb1—O2ii | 3.113 (3) | C1—H1A | 0.9300 |
Rb1—O3ii | 3.125 (3) | C2—C3 | 1.380 (4) |
O1—Rb1—O1iv | 136.43 (9) | C1—C2—C3 | 122.9 (3) |
O1—Rb1—O1i | 132.92 (7) | C1—C2—N1 | 118.9 (3) |
O1iv—Rb1—O1i | 90.36 (6) | C3—C2—N1 | 118.2 (3) |
O1i—Rb1—O1v | 44.43 (9) | C2—C3—C4 | 118.9 (3) |
O1—Rb1—O2ii | 82.42 (8) | C2—C3—H3A | 120.5 |
O1iv—Rb1—O2ii | 68.41 (8) | C4—C3—H3A | 120.5 |
O1i—Rb1—O2ii | 120.08 (7) | C3iii—C4—C3 | 119.9 (4) |
O1v—Rb1—O2ii | 138.23 (8) | C3—C4—C5 | 120.07 (19) |
O2ii—Rb1—O2vi | 95.32 (11) | O1—C5—O1iii | 126.3 (4) |
O1—Rb1—O3ii | 111.10 (10) | O1—C5—C4 | 116.83 (19) |
O1iv—Rb1—O3ii | 65.51 (9) | O1iii—C5—C4 | 116.83 (19) |
O1i—Rb1—O3ii | 79.74 (8) | O2—N1—O3 | 123.5 (3) |
O1v—Rb1—O3ii | 108.31 (7) | O2—N1—C2 | 118.9 (3) |
O2ii—Rb1—O3ii | 40.35 (7) | O3—N1—C2 | 117.6 (3) |
O2vi—Rb1—O3ii | 131.54 (7) | C5—O1—Rb1 | 164.54 (19) |
O2ii—Rb1—O3vi | 131.54 (8) | C5—O1—Rb1v | 94.6 (2) |
O3ii—Rb1—O3vi | 171.57 (10) | Rb1—O1—Rb1v | 89.64 (6) |
C2—C1—C2iii | 116.5 (4) | N1—O2—Rb1ii | 93.5 (2) |
C2—C1—H1A | 121.8 | N1—O3—Rb1ii | 92.7 (2) |
C3—C4—C5—O1 | 10.3 (2) | C3—C2—N1—O2 | 2.7 (5) |
C3iii—C4—C5—O1 | −169.7 (2) | C1—C2—N1—O3 | 2.8 (4) |
C1—C2—N1—O2 | −175.8 (3) | C3—C2—N1—O3 | −178.8 (3) |
Symmetry codes: (i) x−1/2, −y+1, z; (ii) −x+1/2, −y+3/2, −z+3/2; (iii) −x+3/2, y, −z+1; (iv) −x+1/2, y, −z+1; (v) −x+1, −y+1, −z+1; (vi) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Rb(C7H3N2O6)] |
Mr | 296.58 |
Crystal system, space group | Monoclinic, I2/a |
Temperature (K) | 293 |
a, b, c (Å) | 7.2789 (15), 18.072 (4), 7.3652 (14) |
β (°) | 91.70 (3) |
V (Å3) | 968.4 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 5.13 |
Crystal size (mm) | 0.64 × 0.40 × 0.14 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.396, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4663, 896, 760 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.078, 1.06 |
No. of reflections | 896 |
No. of parameters | 75 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.55 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
This work was supported financially by grants from the Scientific Research Plan Projects of Shaanxi Province Department of Health (2010D54), the Natural Science Research Plan Projects of Shaanxi Science and Technology Department (SJ08B19) and the Scientific Research Plan Projects of Shaanxi Education Department (09 J K709). Jing You is thanked for helping to improve the English.
References
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Cametti, M., Nissinen, M., Cort, A. D., Mandolini, L. & Rissanen, K. (2005). J. Am. Chem. Soc. 127, 3831–3837. Web of Science CSD CrossRef PubMed CAS Google Scholar
Madej, A., Oleksyn, B. J. & Śliwiński, J. (2007). Pol. J. Chem. 81, 1201–1218. CAS Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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In the coordination chemistry of 3,5-dinitrobenzoic acid, it has been found that the 3,5-dinitrobenzoate moiety functions as a multidentate ligand (Askarinejad et al., 2007; Madej et al., 2007) with versatile binding and coordination modes. In this paper, we report the crystal structure of the title compound, a new Rb complex obtained by the reaction of 3,5-dinitrobenzoic acid and RbOH in water.
The asymmetric unit of the title compound comprises a Rb cation and a 3,5-dinitrobenzoate anion. Rb cation lies on and the dinitrobenzoate is centred upon crystallographic twofold axes. The Rb cation is coordinated to eight O atoms from five 3,5-dinitrobenzoate anions (Fig. 1) with the Rb—O distances ranging from 2.761 (2) Å to 3.124 (4) Å, which are well within the range reported in the literature (Cametti et al., 2005). The Rb centre is firstly linked by the carboxylic groups to give a one-dimensional chain along the c-axis direction, which is further linked by the phenyl groups to give a three-dimensional framework of the title compound (Fig. 2).