metal-organic compounds
Aquabis(5-butylpyridine-2-carboxylato)zinc monohydrate
aSchool of Basic Science, Guangzhou Medical College, Guangzhou 510182, People's Republic of China, and bGuangdong Institute for Drug Control, Guangzhou 510180, People's Republic of China
*Correspondence e-mail: yywentao@yahoo.com.cn
In the title complex, [Zn(C10H12NO2)2(H2O)]·H2O, the ZnII ion is coordinated by two N and two O atoms from two 5-n-butylpyridine-2-carboxylato ligands and one O atom from a water molecule in a distorted square-pyramidal geometry. In the crystal, intermolecular O—H⋯O hydrogen bonds link molecules into a two-dimensional supramolecular structure parallel to (001).
Related literature
For related structures, see: Pons et al. (2004); Yoshikawa et al. (2002); Qin et al. (2007); He et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b); molecular graphics: SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811021623/hg5046sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811021623/hg5046Isup2.hkl
The title complex was prepared by the addition of a stiochiometric amount to zinc acetate dehydrate (0.054 mmol) to a hot aqueous solution (5 ml) of fusaric acid (30 mmol) which was extracted from the endophytic fungus phomopsis sp. from the mangrove tree on the South China Sea coast. The resulting solution was filtered, and colorless crystals were obtained by slow evaporation of a methanol-water solution (90:10 v/v) at room temperature over several days.
All the H atoms bonded to the C atoms were placed using the HFIX commands in SHELXL-97, with C—H distances of 0.95, 0.98 and 0.99 Å, and were allowed for as riding atoms with Uiso(H) = 1.2 or 1.5Ueq(C). For the H atom of the water molecule, they were found from difference Fourier maps with the O—H bond length restrained to 0.85 Å.
Data collection: APEX2 (Bruker, 2004); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b); molecular graphics: SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXTL (Sheldrick, 2008b).Fig. 1. The molecular structure of the title complex with the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. |
[Zn(C20H12NO2)2(H2O)]·H2O | Z = 2 |
Mr = 457.81 | F(000) = 480 |
Triclinic, P1 | Dx = 1.452 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.6949 (13) Å | Cell parameters from 5809 reflections |
b = 10.0054 (14) Å | θ = 2.3–27.0° |
c = 11.9249 (17) Å | µ = 1.21 mm−1 |
α = 97.799 (2)° | T = 293 K |
β = 91.533 (2)° | Prism, colorless |
γ = 113.464 (2)° | 0.48 × 0.42 × 0.15 mm |
V = 1047.1 (3) Å3 |
Bruker APEXII CCD area-detector diffractometer | 3847 independent reflections |
Radiation source: fine-focus sealed tube | 3410 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
phi and ω scans | θmax = 25.5°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | h = −11→11 |
Tmin = 0.594, Tmax = 0.839 | k = −12→12 |
7770 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0384P)2 + 0.5567P] where P = (Fo2 + 2Fc2)/3 |
3847 reflections | (Δ/σ)max = 0.008 |
264 parameters | Δρmax = 0.47 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
[Zn(C20H12NO2)2(H2O)]·H2O | γ = 113.464 (2)° |
Mr = 457.81 | V = 1047.1 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.6949 (13) Å | Mo Kα radiation |
b = 10.0054 (14) Å | µ = 1.21 mm−1 |
c = 11.9249 (17) Å | T = 293 K |
α = 97.799 (2)° | 0.48 × 0.42 × 0.15 mm |
β = 91.533 (2)° |
Bruker APEXII CCD area-detector diffractometer | 3847 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | 3410 reflections with I > 2σ(I) |
Tmin = 0.594, Tmax = 0.839 | Rint = 0.017 |
7770 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.47 e Å−3 |
3847 reflections | Δρmin = −0.29 e Å−3 |
264 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.9784 (2) | 0.0833 (2) | 0.17910 (17) | 0.0249 (4) | |
C2 | 1.0361 (2) | 0.2469 (2) | 0.22551 (17) | 0.0239 (4) | |
C3 | 1.1290 (3) | 0.3107 (2) | 0.32451 (18) | 0.0311 (5) | |
H3 | 1.1603 | 0.2528 | 0.3674 | 0.037* | |
C4 | 1.1761 (3) | 0.4611 (2) | 0.36059 (19) | 0.0341 (5) | |
H4 | 1.2413 | 0.5071 | 0.4282 | 0.041* | |
C5 | 1.1283 (2) | 0.5447 (2) | 0.29835 (17) | 0.0275 (4) | |
C6 | 1.0337 (2) | 0.4707 (2) | 0.19940 (17) | 0.0250 (4) | |
H6 | 0.9991 | 0.5254 | 0.1555 | 0.030* | |
C7 | 1.1750 (3) | 0.7081 (2) | 0.33348 (18) | 0.0336 (5) | |
H7A | 1.1100 | 0.7396 | 0.2878 | 0.040* | |
H7B | 1.2801 | 0.7601 | 0.3147 | 0.040* | |
C8 | 1.1666 (4) | 0.7566 (3) | 0.4578 (2) | 0.0496 (7) | |
H8A | 1.2515 | 0.7516 | 0.5025 | 0.059* | |
H8B | 1.0716 | 0.6866 | 0.4823 | 0.059* | |
C9 | 1.1725 (4) | 0.9123 (3) | 0.4849 (2) | 0.0544 (7) | |
H9A | 1.0839 | 0.9153 | 0.4439 | 0.065* | |
H9B | 1.1639 | 0.9341 | 0.5673 | 0.065* | |
C10 | 1.3102 (4) | 1.0292 (3) | 0.4550 (3) | 0.0681 (9) | |
H10A | 1.3987 | 1.0303 | 0.4976 | 0.102* | |
H10B | 1.3044 | 1.1251 | 0.4743 | 0.102* | |
H10C | 1.3193 | 1.0100 | 0.3734 | 0.102* | |
C11 | 0.6412 (2) | 0.2796 (2) | −0.07353 (16) | 0.0238 (4) | |
C12 | 0.5820 (2) | 0.1149 (2) | −0.11734 (16) | 0.0225 (4) | |
C13 | 0.4469 (2) | 0.0367 (2) | −0.18239 (18) | 0.0285 (5) | |
H13 | 0.3866 | 0.0852 | −0.2049 | 0.034* | |
C14 | 0.4004 (2) | −0.1145 (2) | −0.21448 (18) | 0.0303 (5) | |
H14 | 0.3074 | −0.1704 | −0.2593 | 0.036* | |
C15 | 0.4900 (3) | −0.1841 (2) | −0.18108 (17) | 0.0281 (5) | |
C16 | 0.6254 (2) | −0.0962 (2) | −0.11735 (17) | 0.0264 (4) | |
H16 | 0.6890 | −0.1414 | −0.0949 | 0.032* | |
C17 | 0.4419 (3) | −0.3486 (2) | −0.21017 (18) | 0.0348 (5) | |
H17A | 0.5116 | −0.3770 | −0.1667 | 0.042* | |
H17B | 0.3397 | −0.3986 | −0.1853 | 0.042* | |
C18 | 0.4389 (4) | −0.4036 (3) | −0.3335 (2) | 0.0471 (7) | |
H18A | 0.5387 | −0.3483 | −0.3602 | 0.057* | |
H18B | 0.3629 | −0.3829 | −0.3767 | 0.057* | |
C19 | 0.4019 (3) | −0.5685 (3) | −0.3597 (2) | 0.0483 (7) | |
H19A | 0.4110 | −0.5946 | −0.4414 | 0.058* | |
H19B | 0.4777 | −0.5890 | −0.3161 | 0.058* | |
C20 | 0.2495 (4) | −0.6646 (3) | −0.3326 (3) | 0.0684 (10) | |
H20A | 0.2403 | −0.6422 | −0.2512 | 0.103* | |
H20B | 0.2340 | −0.7682 | −0.3520 | 0.103* | |
H20C | 0.1733 | −0.6469 | −0.3765 | 0.103* | |
N1 | 0.98977 (19) | 0.32660 (18) | 0.16371 (14) | 0.0230 (4) | |
N2 | 0.67075 (19) | 0.04994 (18) | −0.08590 (13) | 0.0228 (3) | |
O1 | 0.88860 (16) | 0.03799 (15) | 0.09036 (12) | 0.0277 (3) | |
O2 | 1.02181 (19) | 0.00693 (17) | 0.23255 (13) | 0.0351 (4) | |
O3 | 0.76689 (16) | 0.33710 (15) | −0.01438 (12) | 0.0262 (3) | |
O4 | 0.56258 (16) | 0.34586 (16) | −0.09763 (13) | 0.0319 (3) | |
O1W | 1.02425 (16) | 0.24272 (15) | −0.09978 (12) | 0.0253 (3) | |
H1A | 1.0153 | 0.1655 | −0.1447 | 0.038* | |
H1B | 1.1118 | 0.2841 | −0.0657 | 0.038* | |
O2W | 0.69815 (17) | 0.64141 (17) | 0.00070 (14) | 0.0364 (4) | |
H2A | 0.6306 | 0.6516 | 0.0409 | 0.055* | |
H2B | 0.6653 | 0.5519 | −0.0315 | 0.055* | |
Zn1 | 0.86873 (3) | 0.19830 (2) | 0.010473 (19) | 0.02289 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0274 (11) | 0.0232 (10) | 0.0270 (10) | 0.0130 (9) | 0.0052 (9) | 0.0040 (8) |
C2 | 0.0226 (10) | 0.0245 (10) | 0.0262 (10) | 0.0113 (9) | 0.0042 (8) | 0.0036 (8) |
C3 | 0.0358 (12) | 0.0285 (11) | 0.0303 (11) | 0.0154 (10) | −0.0039 (9) | 0.0032 (9) |
C4 | 0.0394 (13) | 0.0308 (12) | 0.0278 (11) | 0.0121 (10) | −0.0068 (10) | −0.0004 (9) |
C5 | 0.0316 (11) | 0.0231 (10) | 0.0253 (10) | 0.0090 (9) | 0.0039 (9) | 0.0015 (8) |
C6 | 0.0281 (11) | 0.0225 (10) | 0.0252 (10) | 0.0110 (9) | 0.0035 (8) | 0.0035 (8) |
C7 | 0.0424 (13) | 0.0221 (11) | 0.0295 (11) | 0.0072 (10) | −0.0006 (10) | 0.0013 (9) |
C8 | 0.085 (2) | 0.0331 (13) | 0.0338 (13) | 0.0273 (14) | 0.0130 (13) | 0.0042 (10) |
C9 | 0.085 (2) | 0.0381 (15) | 0.0421 (15) | 0.0281 (15) | 0.0152 (14) | 0.0021 (11) |
C10 | 0.073 (2) | 0.0339 (15) | 0.089 (2) | 0.0174 (15) | 0.0115 (18) | −0.0066 (15) |
C11 | 0.0247 (10) | 0.0241 (10) | 0.0238 (10) | 0.0115 (9) | 0.0061 (8) | 0.0019 (8) |
C12 | 0.0224 (10) | 0.0227 (10) | 0.0220 (10) | 0.0088 (8) | 0.0053 (8) | 0.0025 (8) |
C13 | 0.0252 (11) | 0.0319 (12) | 0.0285 (11) | 0.0128 (9) | 0.0025 (9) | 0.0013 (9) |
C14 | 0.0246 (11) | 0.0301 (11) | 0.0272 (11) | 0.0037 (9) | 0.0008 (9) | −0.0017 (9) |
C15 | 0.0349 (12) | 0.0232 (10) | 0.0208 (10) | 0.0065 (9) | 0.0046 (9) | 0.0014 (8) |
C16 | 0.0320 (11) | 0.0230 (10) | 0.0236 (10) | 0.0105 (9) | 0.0039 (9) | 0.0039 (8) |
C17 | 0.0450 (14) | 0.0218 (11) | 0.0283 (11) | 0.0055 (10) | −0.0014 (10) | 0.0005 (9) |
C18 | 0.077 (2) | 0.0301 (13) | 0.0324 (13) | 0.0203 (13) | 0.0135 (12) | 0.0027 (10) |
C19 | 0.0670 (18) | 0.0298 (13) | 0.0418 (14) | 0.0143 (13) | 0.0186 (13) | −0.0012 (10) |
C20 | 0.068 (2) | 0.0414 (16) | 0.069 (2) | 0.0008 (15) | 0.0174 (17) | −0.0152 (14) |
N1 | 0.0237 (9) | 0.0204 (8) | 0.0241 (8) | 0.0085 (7) | 0.0012 (7) | 0.0018 (7) |
N2 | 0.0255 (9) | 0.0207 (8) | 0.0210 (8) | 0.0085 (7) | 0.0021 (7) | 0.0018 (6) |
O1 | 0.0304 (8) | 0.0211 (7) | 0.0310 (8) | 0.0107 (6) | −0.0030 (6) | 0.0020 (6) |
O2 | 0.0506 (10) | 0.0279 (8) | 0.0316 (8) | 0.0223 (8) | −0.0051 (7) | 0.0020 (6) |
O3 | 0.0234 (7) | 0.0208 (7) | 0.0327 (8) | 0.0098 (6) | −0.0020 (6) | −0.0023 (6) |
O4 | 0.0277 (8) | 0.0270 (8) | 0.0431 (9) | 0.0161 (7) | −0.0029 (7) | −0.0016 (7) |
O1W | 0.0243 (7) | 0.0229 (7) | 0.0296 (7) | 0.0116 (6) | 0.0011 (6) | 0.0012 (6) |
O2W | 0.0281 (8) | 0.0241 (8) | 0.0546 (10) | 0.0112 (7) | −0.0004 (7) | −0.0025 (7) |
Zn1 | 0.02298 (14) | 0.01954 (13) | 0.02499 (14) | 0.00872 (10) | −0.00164 (9) | 0.00013 (9) |
C1—O2 | 1.241 (2) | C13—C14 | 1.389 (3) |
C1—O1 | 1.261 (3) | C13—H13 | 0.9500 |
C1—C2 | 1.519 (3) | C14—C15 | 1.391 (3) |
C2—N1 | 1.345 (3) | C14—H14 | 0.9500 |
C2—C3 | 1.376 (3) | C15—C16 | 1.386 (3) |
C3—C4 | 1.388 (3) | C15—C17 | 1.508 (3) |
C3—H3 | 0.9500 | C16—N2 | 1.342 (3) |
C4—C5 | 1.387 (3) | C16—H16 | 0.9500 |
C4—H4 | 0.9500 | C17—C18 | 1.494 (3) |
C5—C6 | 1.395 (3) | C17—H17A | 0.9900 |
C5—C7 | 1.506 (3) | C17—H17B | 0.9900 |
C6—N1 | 1.332 (3) | C18—C19 | 1.528 (3) |
C6—H6 | 0.9500 | C18—H18A | 0.9900 |
C7—C8 | 1.511 (3) | C18—H18B | 0.9900 |
C7—H7A | 0.9900 | C19—C20 | 1.480 (4) |
C7—H7B | 0.9900 | C19—H19A | 0.9900 |
C8—C9 | 1.525 (3) | C19—H19B | 0.9900 |
C8—H8A | 0.9900 | C20—H20A | 0.9800 |
C8—H8B | 0.9900 | C20—H20B | 0.9800 |
C9—C10 | 1.474 (4) | C20—H20C | 0.9800 |
C9—H9A | 0.9900 | N1—Zn1 | 2.1007 (16) |
C9—H9B | 0.9900 | N2—Zn1 | 2.0877 (17) |
C10—H10A | 0.9800 | O1—Zn1 | 2.0416 (14) |
C10—H10B | 0.9800 | O3—Zn1 | 2.0443 (14) |
C10—H10C | 0.9800 | O1W—Zn1 | 1.9825 (14) |
C11—O4 | 1.243 (2) | O1W—H1A | 0.8498 |
C11—O3 | 1.264 (2) | O1W—H1B | 0.8440 |
C11—C12 | 1.521 (3) | O2W—H2A | 0.8514 |
C12—N2 | 1.341 (3) | O2W—H2B | 0.8510 |
C12—C13 | 1.377 (3) | ||
O2—C1—O1 | 126.36 (19) | C15—C14—H14 | 120.0 |
O2—C1—C2 | 117.37 (18) | C16—C15—C14 | 117.25 (19) |
O1—C1—C2 | 116.27 (17) | C16—C15—C17 | 120.7 (2) |
N1—C2—C3 | 121.57 (19) | C14—C15—C17 | 122.0 (2) |
N1—C2—C1 | 115.64 (17) | N2—C16—C15 | 122.97 (19) |
C3—C2—C1 | 122.79 (18) | N2—C16—H16 | 118.5 |
C2—C3—C4 | 118.9 (2) | C15—C16—H16 | 118.5 |
C2—C3—H3 | 120.6 | C18—C17—C15 | 114.50 (19) |
C4—C3—H3 | 120.6 | C18—C17—H17A | 108.6 |
C5—C4—C3 | 120.3 (2) | C15—C17—H17A | 108.6 |
C5—C4—H4 | 119.9 | C18—C17—H17B | 108.6 |
C3—C4—H4 | 119.9 | C15—C17—H17B | 108.6 |
C4—C5—C6 | 116.93 (19) | H17A—C17—H17B | 107.6 |
C4—C5—C7 | 122.71 (19) | C17—C18—C19 | 113.5 (2) |
C6—C5—C7 | 120.36 (19) | C17—C18—H18A | 108.9 |
N1—C6—C5 | 122.96 (19) | C19—C18—H18A | 108.9 |
N1—C6—H6 | 118.5 | C17—C18—H18B | 108.9 |
C5—C6—H6 | 118.5 | C19—C18—H18B | 108.9 |
C5—C7—C8 | 115.23 (19) | H18A—C18—H18B | 107.7 |
C5—C7—H7A | 108.5 | C20—C19—C18 | 114.3 (2) |
C8—C7—H7A | 108.5 | C20—C19—H19A | 108.7 |
C5—C7—H7B | 108.5 | C18—C19—H19A | 108.7 |
C8—C7—H7B | 108.5 | C20—C19—H19B | 108.7 |
H7A—C7—H7B | 107.5 | C18—C19—H19B | 108.7 |
C7—C8—C9 | 113.9 (2) | H19A—C19—H19B | 107.6 |
C7—C8—H8A | 108.8 | C19—C20—H20A | 109.5 |
C9—C8—H8A | 108.8 | C19—C20—H20B | 109.5 |
C7—C8—H8B | 108.8 | H20A—C20—H20B | 109.5 |
C9—C8—H8B | 108.8 | C19—C20—H20C | 109.5 |
H8A—C8—H8B | 107.7 | H20A—C20—H20C | 109.5 |
C10—C9—C8 | 114.8 (3) | H20B—C20—H20C | 109.5 |
C10—C9—H9A | 108.6 | C6—N1—C2 | 119.38 (17) |
C8—C9—H9A | 108.6 | C6—N1—Zn1 | 129.26 (14) |
C10—C9—H9B | 108.6 | C2—N1—Zn1 | 111.10 (13) |
C8—C9—H9B | 108.6 | C12—N2—C16 | 119.00 (17) |
H9A—C9—H9B | 107.6 | C12—N2—Zn1 | 112.83 (13) |
C9—C10—H10A | 109.5 | C16—N2—Zn1 | 128.17 (14) |
C9—C10—H10B | 109.5 | C1—O1—Zn1 | 115.66 (13) |
H10A—C10—H10B | 109.5 | C11—O3—Zn1 | 116.22 (12) |
C9—C10—H10C | 109.5 | Zn1—O1W—H1A | 111.6 |
H10A—C10—H10C | 109.5 | Zn1—O1W—H1B | 110.8 |
H10B—C10—H10C | 109.5 | H1A—O1W—H1B | 110.4 |
O4—C11—O3 | 125.56 (18) | H2A—O2W—H2B | 108.2 |
O4—C11—C12 | 117.92 (17) | O1W—Zn1—O1 | 106.09 (6) |
O3—C11—C12 | 116.52 (17) | O1W—Zn1—O3 | 102.80 (6) |
N2—C12—C13 | 122.02 (18) | O1—Zn1—O3 | 151.11 (6) |
N2—C12—C11 | 114.71 (17) | O1W—Zn1—N2 | 104.39 (6) |
C13—C12—C11 | 123.26 (18) | O1—Zn1—N2 | 92.68 (6) |
C12—C13—C14 | 118.69 (19) | O3—Zn1—N2 | 79.70 (6) |
C12—C13—H13 | 120.7 | O1W—Zn1—N1 | 103.25 (6) |
C14—C13—H13 | 120.7 | O1—Zn1—N1 | 79.91 (6) |
C13—C14—C15 | 120.04 (19) | O3—Zn1—N1 | 93.96 (6) |
C13—C14—H14 | 120.0 | N2—Zn1—N1 | 152.36 (6) |
O2—C1—C2—N1 | 178.32 (18) | C1—C2—N1—Zn1 | −6.2 (2) |
O1—C1—C2—N1 | −2.8 (3) | C13—C12—N2—C16 | −1.0 (3) |
O2—C1—C2—C3 | −2.0 (3) | C11—C12—N2—C16 | 177.81 (17) |
O1—C1—C2—C3 | 176.9 (2) | C13—C12—N2—Zn1 | 179.31 (15) |
N1—C2—C3—C4 | −0.3 (3) | C11—C12—N2—Zn1 | −1.9 (2) |
C1—C2—C3—C4 | −179.9 (2) | C15—C16—N2—C12 | −0.2 (3) |
C2—C3—C4—C5 | 0.8 (3) | C15—C16—N2—Zn1 | 179.46 (15) |
C3—C4—C5—C6 | −0.5 (3) | O2—C1—O1—Zn1 | −170.40 (17) |
C3—C4—C5—C7 | 179.7 (2) | C2—C1—O1—Zn1 | 10.8 (2) |
C4—C5—C6—N1 | −0.3 (3) | O4—C11—O3—Zn1 | 179.89 (16) |
C7—C5—C6—N1 | 179.44 (19) | C12—C11—O3—Zn1 | 0.5 (2) |
C4—C5—C7—C8 | −45.1 (3) | C1—O1—Zn1—O1W | 89.95 (15) |
C6—C5—C7—C8 | 135.1 (2) | C1—O1—Zn1—O3 | −90.86 (18) |
C5—C7—C8—C9 | −164.3 (2) | C1—O1—Zn1—N2 | −164.24 (14) |
C7—C8—C9—C10 | −59.7 (4) | C1—O1—Zn1—N1 | −11.06 (14) |
O4—C11—C12—N2 | −178.46 (18) | C11—O3—Zn1—O1W | 101.39 (14) |
O3—C11—C12—N2 | 0.9 (3) | C11—O3—Zn1—O1 | −77.81 (18) |
O4—C11—C12—C13 | 0.4 (3) | C11—O3—Zn1—N2 | −1.18 (14) |
O3—C11—C12—C13 | 179.76 (19) | C11—O3—Zn1—N1 | −154.05 (14) |
N2—C12—C13—C14 | 1.1 (3) | C12—N2—Zn1—O1W | −99.05 (13) |
C11—C12—C13—C14 | −177.59 (18) | C16—N2—Zn1—O1W | 81.32 (17) |
C12—C13—C14—C15 | −0.1 (3) | C12—N2—Zn1—O1 | 153.59 (13) |
C13—C14—C15—C16 | −1.0 (3) | C16—N2—Zn1—O1 | −26.04 (17) |
C13—C14—C15—C17 | 177.75 (19) | C12—N2—Zn1—O3 | 1.66 (13) |
C14—C15—C16—N2 | 1.1 (3) | C16—N2—Zn1—O3 | −177.97 (17) |
C17—C15—C16—N2 | −177.61 (19) | C12—N2—Zn1—N1 | 80.37 (19) |
C16—C15—C17—C18 | −112.4 (3) | C16—N2—Zn1—N1 | −99.3 (2) |
C14—C15—C17—C18 | 68.9 (3) | C6—N1—Zn1—O1W | 78.55 (18) |
C15—C17—C18—C19 | 175.5 (2) | C2—N1—Zn1—O1W | −95.41 (14) |
C17—C18—C19—C20 | 63.4 (4) | C6—N1—Zn1—O1 | −177.13 (18) |
C5—C6—N1—C2 | 0.9 (3) | C2—N1—Zn1—O1 | 8.90 (13) |
C5—C6—N1—Zn1 | −172.66 (15) | C6—N1—Zn1—O3 | −25.60 (18) |
C3—C2—N1—C6 | −0.6 (3) | C2—N1—Zn1—O3 | 160.44 (13) |
C1—C2—N1—C6 | 179.13 (17) | C6—N1—Zn1—N2 | −100.9 (2) |
C3—C2—N1—Zn1 | 174.08 (16) | C2—N1—Zn1—N2 | 85.17 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H2B···O4 | 0.85 | 1.94 | 2.780 (2) | 172 |
O2W—H2A···O4i | 0.85 | 2.02 | 2.849 (2) | 165 |
O1W—H1B···O2Wii | 0.84 | 1.80 | 2.638 (2) | 175 |
O1W—H1A···O2iii | 0.85 | 1.79 | 2.636 (2) | 174 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+2, −y+1, −z; (iii) −x+2, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C20H12NO2)2(H2O)]·H2O |
Mr | 457.81 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 9.6949 (13), 10.0054 (14), 11.9249 (17) |
α, β, γ (°) | 97.799 (2), 91.533 (2), 113.464 (2) |
V (Å3) | 1047.1 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.21 |
Crystal size (mm) | 0.48 × 0.42 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2008a) |
Tmin, Tmax | 0.594, 0.839 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7770, 3847, 3410 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.075, 1.06 |
No. of reflections | 3847 |
No. of parameters | 264 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.47, −0.29 |
Computer programs: APEX2 (Bruker, 2004), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008b), SHELXL97 (Sheldrick, 2008b), SHELXTL (Sheldrick, 2008b).
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H2B···O4 | 0.85 | 1.94 | 2.780 (2) | 172 |
O2W—H2A···O4i | 0.85 | 2.02 | 2.849 (2) | 165 |
O1W—H1B···O2Wii | 0.84 | 1.80 | 2.638 (2) | 175 |
O1W—H1A···O2iii | 0.85 | 1.79 | 2.636 (2) | 174 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+2, −y+1, −z; (iii) −x+2, −y, −z. |
Acknowledgements
This work was supported by the Guangzhou Science and Technology Projects Fund (2010Y1-C371), the Guangzhou Municipal Bureau of Education Projects Fund (10 A168) and the doctoral startup fund of Guangzhou Medical College (2008 C25).
References
Bruker (2001). SAINT-Plus. Bruker AXS Inc., Madison,Wisconsin, USA. Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As known for a long time, pyridine-2-carboxylato ion and its derivatives are good chelating ligands for many transition metals(Pons, et al., 2004; Yoshikawa, et al., 2002; Qin et al., 2007; He et al., 2007). Here, we report a new zinc complex based on 5-n-butylpyridine-2-carboxylate.
The crystal structure of the title compound,(I), is shown in Fig. 1. The coordination sphere of the ZnII ion should be described as a distorted square-pyramidal, in which the four basal positions are occupied by two N atoms and two O atoms from two 5-n-butylpyridine-2-carboxylato ligands, and the fifth apical site is occupied by the O atom of the coordinated solvent water molecule. The Zn(II) ion is out of the plane formed by N2O2 unit 0.504 (8)Å towards the Zn—Owater bond. The average Zn—N, Zn—Oligand, and the Zn—Owater are 2.094, 2.043, and 2.044Å, respectively, in agreement with the corresponding distances found in other Zn complexes containing similar ligands (Qin et al., 2007; He et al., 2007). It was noting that the title complex was linked into a two-dimensional supermolecular structure under the help of the intermolecular O—H···O hydrogen bonds interactions.