metal-organic compounds
Bis[3,3-dimethyl-2-(2-oxoethylidene)indolinyl-κ2N,O]palladium(II)
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and bDepartment of Chemistry, University of California, One Shields Avenue, Davis, CA, 95616, USA.
*Correspondence e-mail: khaledi@siswa.um.edu.my
The 12H12NO)2], consists of three crystallographically independent half-molecules. Each PdII atom lies on a center of inversion and is four-coordinated by two monoanionic forms of the aminoacrylaldehyde in a square-planar geometry. In the crystal, adjacent molecules are connected through C—H⋯π and C—H⋯O interactions into a three-dimensional polymeric structure.
of the title compound, [Pd(CExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811022069/is2718sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811022069/is2718Isup2.hkl
A solution of palladium(II) complex II (Fig. 2) in a mixture of DMF and pyridine yielded the yellowish green crystals of III and IV in two weeks. Upon standing of the solution in a closed vial at room temperature for a month, the orange crystals of the title compound appeared while the former crystals began to disappear slowly and finally disappeared completely after two months.
Hydrogen atoms were placed at calculated positions and refined as riding atoms with distances of H—C(sp2) = 0.95 and H—C(methyl) = 0.98 Å and with Uiso(H) set to 1.2 (1.5 for methyl)Ueq(C). The most disagreeable reflections with delta(F2)/e.s.d. >10 were omitted (13 reflections). The maximum and minimum residual electron density peaks of 1.35 Å and -0.75 e Å-3, respectively, were located 1.44 Å and 0.85 Å from the H16 and Pd2 atoms, respectively.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).Fig. 1. The molecular structure of the title compound (50% probability ellipsoids). Hydrogen atoms have been omitted for clarity. Symmetry codes: ' = -x, -y, -z; '' = -x, -y+1, -z+1; ''' = -x+1, -y+2, -z+1. | |
Fig. 2. Reaction scheme. |
[Pd(C12H12NO)2] | Z = 3 |
Mr = 478.85 | F(000) = 732 |
Triclinic, P1 | Dx = 1.531 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.453 (2) Å | Cell parameters from 2716 reflections |
b = 12.669 (3) Å | θ = 2.3–24.8° |
c = 13.056 (3) Å | µ = 0.92 mm−1 |
α = 87.750 (3)° | T = 100 K |
β = 73.271 (3)° | Rod, orange |
γ = 70.565 (3)° | 0.18 × 0.09 × 0.06 mm |
V = 1558.5 (6) Å3 |
Bruker APEXII CCD diffractometer | 6083 independent reflections |
Radiation source: fine-focus sealed tube | 4905 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→12 |
Tmin = 0.853, Tmax = 0.947 | k = −15→15 |
13381 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.042P)2] where P = (Fo2 + 2Fc2)/3 |
6083 reflections | (Δ/σ)max < 0.001 |
403 parameters | Δρmax = 1.35 e Å−3 |
0 restraints | Δρmin = −0.75 e Å−3 |
[Pd(C12H12NO)2] | γ = 70.565 (3)° |
Mr = 478.85 | V = 1558.5 (6) Å3 |
Triclinic, P1 | Z = 3 |
a = 10.453 (2) Å | Mo Kα radiation |
b = 12.669 (3) Å | µ = 0.92 mm−1 |
c = 13.056 (3) Å | T = 100 K |
α = 87.750 (3)° | 0.18 × 0.09 × 0.06 mm |
β = 73.271 (3)° |
Bruker APEXII CCD diffractometer | 6083 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 4905 reflections with I > 2σ(I) |
Tmin = 0.853, Tmax = 0.947 | Rint = 0.042 |
13381 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.03 | Δρmax = 1.35 e Å−3 |
6083 reflections | Δρmin = −0.75 e Å−3 |
403 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Pd1 | 0.0000 | 0.0000 | 0.0000 | 0.01805 (11) | |
O1 | 0.2061 (3) | −0.0799 (2) | −0.0656 (2) | 0.0239 (6) | |
N1 | 0.0435 (3) | 0.0856 (2) | 0.1068 (2) | 0.0179 (7) | |
C1 | 0.1611 (4) | 0.0445 (3) | 0.1357 (3) | 0.0202 (8) | |
C2 | 0.1613 (4) | 0.1157 (3) | 0.2271 (3) | 0.0190 (8) | |
C3 | 0.0286 (4) | 0.2125 (3) | 0.2365 (3) | 0.0190 (8) | |
C4 | −0.0276 (4) | 0.3108 (3) | 0.2998 (3) | 0.0212 (9) | |
H4 | 0.0172 | 0.3235 | 0.3497 | 0.025* | |
C5 | −0.1499 (4) | 0.3907 (3) | 0.2897 (3) | 0.0229 (9) | |
H5 | −0.1900 | 0.4589 | 0.3329 | 0.027* | |
C6 | −0.2146 (4) | 0.3718 (3) | 0.2166 (3) | 0.0214 (9) | |
H6 | −0.2977 | 0.4280 | 0.2092 | 0.026* | |
C7 | −0.1596 (4) | 0.2716 (3) | 0.1537 (3) | 0.0185 (8) | |
H7 | −0.2050 | 0.2585 | 0.1045 | 0.022* | |
C8 | −0.0379 (4) | 0.1920 (3) | 0.1645 (3) | 0.0156 (8) | |
C9 | 0.2790 (4) | −0.0489 (3) | 0.0843 (3) | 0.0261 (9) | |
H9 | 0.3503 | −0.0801 | 0.1191 | 0.031* | |
C10 | 0.2965 (4) | −0.0971 (3) | −0.0124 (3) | 0.0272 (10) | |
H10 | 0.3874 | −0.1504 | −0.0448 | 0.033* | |
C11 | 0.2927 (4) | 0.1515 (3) | 0.2003 (4) | 0.0285 (10) | |
H11A | 0.2987 | 0.1924 | 0.1348 | 0.043* | |
H11B | 0.3778 | 0.0848 | 0.1893 | 0.043* | |
H11C | 0.2859 | 0.2001 | 0.2596 | 0.043* | |
C12 | 0.1514 (5) | 0.0497 (4) | 0.3293 (3) | 0.0293 (10) | |
H12A | 0.1449 | 0.0972 | 0.3893 | 0.044* | |
H12B | 0.2362 | −0.0173 | 0.3176 | 0.044* | |
H12C | 0.0669 | 0.0272 | 0.3457 | 0.044* | |
Pd2 | 0.0000 | 0.5000 | 0.5000 | 0.01294 (11) | |
O2 | −0.1393 (3) | 0.6550 (2) | 0.52634 (19) | 0.0188 (6) | |
N2 | 0.0867 (3) | 0.5334 (3) | 0.3486 (2) | 0.0159 (7) | |
C13 | 0.0131 (4) | 0.6108 (3) | 0.2965 (3) | 0.0193 (8) | |
C14 | 0.0925 (4) | 0.6054 (3) | 0.1789 (3) | 0.0235 (9) | |
C15 | 0.2302 (4) | 0.5152 (3) | 0.1742 (3) | 0.0230 (9) | |
C16 | 0.3528 (5) | 0.4708 (4) | 0.0914 (3) | 0.0310 (11) | |
H16 | 0.3586 | 0.4957 | 0.0211 | 0.037* | |
C17 | 0.4673 (5) | 0.3894 (4) | 0.1122 (4) | 0.0350 (11) | |
H17 | 0.5513 | 0.3564 | 0.0552 | 0.042* | |
C18 | 0.4609 (4) | 0.3559 (3) | 0.2136 (4) | 0.0301 (10) | |
H18 | 0.5417 | 0.3014 | 0.2264 | 0.036* | |
C19 | 0.3392 (4) | 0.3996 (3) | 0.2981 (3) | 0.0214 (9) | |
H19 | 0.3357 | 0.3768 | 0.3688 | 0.026* | |
C20 | 0.2232 (4) | 0.4774 (3) | 0.2763 (3) | 0.0188 (8) | |
C21 | −0.1195 (4) | 0.6926 (3) | 0.3431 (3) | 0.0253 (9) | |
H21 | −0.1702 | 0.7359 | 0.2973 | 0.030* | |
C22 | −0.1785 (4) | 0.7127 (3) | 0.4509 (3) | 0.0248 (9) | |
H22 | −0.2596 | 0.7783 | 0.4734 | 0.030* | |
C23 | 0.1133 (5) | 0.7192 (4) | 0.1471 (3) | 0.0328 (11) | |
H23A | 0.1568 | 0.7420 | 0.1957 | 0.049* | |
H23B | 0.0210 | 0.7762 | 0.1521 | 0.049* | |
H23C | 0.1752 | 0.7112 | 0.0734 | 0.049* | |
C24 | 0.0148 (5) | 0.5727 (4) | 0.1081 (3) | 0.0373 (12) | |
H24A | 0.0701 | 0.5674 | 0.0326 | 0.056* | |
H24B | −0.0789 | 0.6300 | 0.1189 | 0.056* | |
H24C | 0.0037 | 0.5002 | 0.1277 | 0.056* | |
Pd3 | 0.5000 | 1.0000 | 0.5000 | 0.01505 (11) | |
O3 | 0.3211 (3) | 1.0191 (2) | 0.6163 (2) | 0.0218 (6) | |
N3 | 0.4648 (3) | 0.8844 (2) | 0.4194 (2) | 0.0171 (7) | |
C25 | 0.3843 (4) | 0.8253 (3) | 0.4695 (3) | 0.0170 (8) | |
C26 | 0.3941 (4) | 0.7294 (3) | 0.3976 (3) | 0.0210 (9) | |
C27 | 0.4854 (4) | 0.7514 (3) | 0.2935 (3) | 0.0205 (9) | |
C28 | 0.5324 (5) | 0.6965 (3) | 0.1924 (3) | 0.0267 (10) | |
H28 | 0.5075 | 0.6331 | 0.1816 | 0.032* | |
C29 | 0.6159 (5) | 0.7355 (4) | 0.1080 (3) | 0.0310 (10) | |
H29 | 0.6506 | 0.6978 | 0.0390 | 0.037* | |
C30 | 0.6491 (4) | 0.8297 (4) | 0.1241 (3) | 0.0277 (10) | |
H30 | 0.7044 | 0.8568 | 0.0650 | 0.033* | |
C31 | 0.6035 (4) | 0.8854 (3) | 0.2245 (3) | 0.0218 (9) | |
H31 | 0.6264 | 0.9500 | 0.2346 | 0.026* | |
C32 | 0.5235 (4) | 0.8437 (3) | 0.3091 (3) | 0.0181 (8) | |
C33 | 0.2959 (4) | 0.8471 (3) | 0.5760 (3) | 0.0228 (9) | |
H33 | 0.2549 | 0.7924 | 0.6067 | 0.027* | |
C34 | 0.2652 (4) | 0.9417 (3) | 0.6379 (3) | 0.0253 (9) | |
H34 | 0.1943 | 0.9513 | 0.7048 | 0.030* | |
C35 | 0.2477 (4) | 0.7321 (4) | 0.3930 (3) | 0.0271 (10) | |
H35A | 0.1988 | 0.8047 | 0.3691 | 0.041* | |
H35B | 0.1914 | 0.7216 | 0.4644 | 0.041* | |
H35C | 0.2595 | 0.6719 | 0.3426 | 0.041* | |
C36 | 0.4685 (5) | 0.6181 (3) | 0.4390 (3) | 0.0288 (10) | |
H36A | 0.4821 | 0.5561 | 0.3900 | 0.043* | |
H36B | 0.4102 | 0.6096 | 0.5104 | 0.043* | |
H36C | 0.5609 | 0.6173 | 0.4432 | 0.043* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Pd1 | 0.0179 (2) | 0.0176 (2) | 0.0192 (2) | −0.00839 (18) | −0.00271 (18) | −0.00333 (17) |
O1 | 0.0185 (14) | 0.0241 (15) | 0.0265 (15) | −0.0085 (12) | 0.0006 (12) | −0.0092 (12) |
N1 | 0.0220 (17) | 0.0140 (16) | 0.0178 (16) | −0.0082 (14) | −0.0034 (14) | 0.0003 (13) |
C1 | 0.022 (2) | 0.016 (2) | 0.027 (2) | −0.0102 (17) | −0.0078 (18) | 0.0025 (17) |
C2 | 0.021 (2) | 0.020 (2) | 0.021 (2) | −0.0119 (17) | −0.0078 (17) | 0.0004 (16) |
C3 | 0.019 (2) | 0.0149 (19) | 0.024 (2) | −0.0069 (16) | −0.0056 (17) | 0.0017 (16) |
C4 | 0.024 (2) | 0.022 (2) | 0.021 (2) | −0.0137 (18) | −0.0065 (17) | −0.0036 (17) |
C5 | 0.030 (2) | 0.018 (2) | 0.022 (2) | −0.0134 (18) | −0.0019 (18) | −0.0021 (17) |
C6 | 0.023 (2) | 0.0128 (19) | 0.027 (2) | −0.0051 (17) | −0.0063 (18) | 0.0028 (17) |
C7 | 0.023 (2) | 0.020 (2) | 0.0153 (19) | −0.0124 (17) | −0.0038 (16) | 0.0035 (16) |
C8 | 0.020 (2) | 0.0148 (19) | 0.0134 (18) | −0.0104 (16) | −0.0004 (16) | 0.0002 (15) |
C9 | 0.023 (2) | 0.021 (2) | 0.039 (3) | −0.0107 (18) | −0.013 (2) | 0.0015 (19) |
C10 | 0.017 (2) | 0.020 (2) | 0.044 (3) | −0.0069 (18) | −0.005 (2) | −0.0080 (19) |
C11 | 0.021 (2) | 0.028 (2) | 0.042 (3) | −0.0128 (19) | −0.012 (2) | 0.000 (2) |
C12 | 0.033 (2) | 0.029 (2) | 0.030 (2) | −0.010 (2) | −0.018 (2) | 0.0124 (19) |
Pd2 | 0.0149 (2) | 0.0131 (2) | 0.0107 (2) | −0.00434 (17) | −0.00404 (16) | 0.00026 (15) |
O2 | 0.0198 (14) | 0.0162 (14) | 0.0180 (14) | −0.0028 (11) | −0.0060 (11) | 0.0018 (11) |
N2 | 0.0183 (17) | 0.0186 (17) | 0.0125 (15) | −0.0080 (14) | −0.0049 (13) | 0.0009 (13) |
C13 | 0.024 (2) | 0.026 (2) | 0.0143 (19) | −0.0140 (18) | −0.0089 (17) | 0.0046 (16) |
C14 | 0.033 (2) | 0.036 (2) | 0.0104 (18) | −0.023 (2) | −0.0078 (17) | 0.0071 (17) |
C15 | 0.030 (2) | 0.026 (2) | 0.019 (2) | −0.0220 (19) | −0.0021 (18) | −0.0027 (17) |
C16 | 0.045 (3) | 0.035 (3) | 0.016 (2) | −0.029 (2) | 0.007 (2) | −0.0068 (19) |
C17 | 0.031 (3) | 0.024 (2) | 0.042 (3) | −0.016 (2) | 0.013 (2) | −0.010 (2) |
C18 | 0.023 (2) | 0.023 (2) | 0.043 (3) | −0.0139 (19) | 0.000 (2) | −0.002 (2) |
C19 | 0.021 (2) | 0.018 (2) | 0.027 (2) | −0.0114 (17) | −0.0031 (18) | 0.0005 (17) |
C20 | 0.022 (2) | 0.021 (2) | 0.0172 (19) | −0.0156 (18) | −0.0006 (16) | −0.0042 (16) |
C21 | 0.027 (2) | 0.025 (2) | 0.025 (2) | −0.0058 (19) | −0.0139 (19) | 0.0110 (18) |
C22 | 0.020 (2) | 0.017 (2) | 0.031 (2) | 0.0026 (17) | −0.0089 (19) | 0.0024 (18) |
C23 | 0.049 (3) | 0.036 (3) | 0.023 (2) | −0.026 (2) | −0.013 (2) | 0.014 (2) |
C24 | 0.052 (3) | 0.059 (3) | 0.021 (2) | −0.037 (3) | −0.021 (2) | 0.013 (2) |
Pd3 | 0.0166 (2) | 0.0113 (2) | 0.0193 (2) | −0.00579 (17) | −0.00698 (17) | 0.00068 (16) |
O3 | 0.0213 (15) | 0.0200 (15) | 0.0245 (15) | −0.0110 (12) | −0.0020 (12) | −0.0023 (12) |
N3 | 0.0196 (17) | 0.0142 (16) | 0.0197 (16) | −0.0063 (14) | −0.0083 (14) | 0.0016 (13) |
C25 | 0.020 (2) | 0.0133 (19) | 0.021 (2) | −0.0072 (16) | −0.0090 (17) | 0.0022 (16) |
C26 | 0.029 (2) | 0.014 (2) | 0.024 (2) | −0.0088 (17) | −0.0106 (18) | 0.0022 (16) |
C27 | 0.027 (2) | 0.0103 (19) | 0.025 (2) | −0.0031 (17) | −0.0137 (18) | 0.0014 (16) |
C28 | 0.037 (3) | 0.017 (2) | 0.030 (2) | −0.0087 (19) | −0.015 (2) | −0.0028 (18) |
C29 | 0.043 (3) | 0.030 (2) | 0.024 (2) | −0.012 (2) | −0.015 (2) | 0.0016 (19) |
C30 | 0.028 (2) | 0.032 (2) | 0.021 (2) | −0.007 (2) | −0.0073 (19) | 0.0017 (19) |
C31 | 0.025 (2) | 0.017 (2) | 0.026 (2) | −0.0091 (18) | −0.0093 (18) | 0.0017 (17) |
C32 | 0.020 (2) | 0.017 (2) | 0.020 (2) | −0.0031 (16) | −0.0123 (17) | 0.0001 (16) |
C33 | 0.028 (2) | 0.018 (2) | 0.027 (2) | −0.0143 (18) | −0.0076 (18) | 0.0064 (17) |
C34 | 0.023 (2) | 0.029 (2) | 0.022 (2) | −0.0137 (19) | 0.0017 (18) | 0.0004 (18) |
C35 | 0.030 (2) | 0.029 (2) | 0.033 (2) | −0.019 (2) | −0.015 (2) | 0.0028 (19) |
C36 | 0.040 (3) | 0.013 (2) | 0.035 (2) | −0.0062 (19) | −0.017 (2) | 0.0040 (18) |
Pd1—O1i | 1.989 (3) | C17—C18 | 1.364 (6) |
Pd1—O1 | 1.989 (3) | C17—H17 | 0.9500 |
Pd1—N1i | 2.035 (3) | C18—C19 | 1.384 (5) |
Pd1—N1 | 2.035 (3) | C18—H18 | 0.9500 |
O1—C10 | 1.285 (5) | C19—C20 | 1.381 (5) |
N1—C1 | 1.323 (5) | C19—H19 | 0.9500 |
N1—C8 | 1.434 (4) | C21—C22 | 1.359 (5) |
C1—C9 | 1.410 (5) | C21—H21 | 0.9500 |
C1—C2 | 1.524 (5) | C22—H22 | 0.9500 |
C2—C3 | 1.491 (5) | C23—H23A | 0.9800 |
C2—C11 | 1.530 (5) | C23—H23B | 0.9800 |
C2—C12 | 1.543 (5) | C23—H23C | 0.9800 |
C3—C4 | 1.377 (5) | C24—H24A | 0.9800 |
C3—C8 | 1.397 (5) | C24—H24B | 0.9800 |
C4—C5 | 1.379 (5) | C24—H24C | 0.9800 |
C4—H4 | 0.9500 | Pd3—O3iii | 1.988 (3) |
C5—C6 | 1.387 (5) | Pd3—O3 | 1.988 (3) |
C5—H5 | 0.9500 | Pd3—N3 | 2.022 (3) |
C6—C7 | 1.393 (5) | Pd3—N3iii | 2.022 (3) |
C6—H6 | 0.9500 | O3—C34 | 1.284 (4) |
C7—C8 | 1.375 (5) | N3—C25 | 1.327 (5) |
C7—H7 | 0.9500 | N3—C32 | 1.433 (5) |
C9—C10 | 1.361 (5) | C25—C33 | 1.408 (5) |
C9—H9 | 0.9500 | C25—C26 | 1.524 (5) |
C10—H10 | 0.9500 | C26—C27 | 1.495 (5) |
C11—H11A | 0.9800 | C26—C36 | 1.529 (5) |
C11—H11B | 0.9800 | C26—C35 | 1.537 (5) |
C11—H11C | 0.9800 | C27—C28 | 1.392 (5) |
C12—H12A | 0.9800 | C27—C32 | 1.395 (5) |
C12—H12B | 0.9800 | C28—C29 | 1.382 (6) |
C12—H12C | 0.9800 | C28—H28 | 0.9500 |
Pd2—O2ii | 1.989 (2) | C29—C30 | 1.387 (6) |
Pd2—O2 | 1.989 (2) | C29—H29 | 0.9500 |
Pd2—N2ii | 2.016 (3) | C30—C31 | 1.390 (5) |
Pd2—N2 | 2.016 (3) | C30—H30 | 0.9500 |
O2—C22 | 1.285 (4) | C31—C32 | 1.383 (5) |
N2—C13 | 1.328 (5) | C31—H31 | 0.9500 |
N2—C20 | 1.426 (5) | C33—C34 | 1.365 (5) |
C13—C21 | 1.405 (5) | C33—H33 | 0.9500 |
C13—C14 | 1.512 (5) | C34—H34 | 0.9500 |
C14—C15 | 1.497 (6) | C35—H35A | 0.9800 |
C14—C24 | 1.540 (5) | C35—H35B | 0.9800 |
C14—C23 | 1.552 (5) | C35—H35C | 0.9800 |
C15—C16 | 1.378 (5) | C36—H36A | 0.9800 |
C15—C20 | 1.388 (5) | C36—H36B | 0.9800 |
C16—C17 | 1.384 (6) | C36—H36C | 0.9800 |
C16—H16 | 0.9500 | ||
O1i—Pd1—O1 | 180.00 (10) | C17—C18—C19 | 121.4 (4) |
O1i—Pd1—N1i | 90.38 (11) | C17—C18—H18 | 119.3 |
O1—Pd1—N1i | 89.62 (11) | C19—C18—H18 | 119.3 |
O1i—Pd1—N1 | 89.62 (11) | C20—C19—C18 | 117.7 (4) |
O1—Pd1—N1 | 90.38 (11) | C20—C19—H19 | 121.1 |
N1i—Pd1—N1 | 180.0 | C18—C19—H19 | 121.1 |
C10—O1—Pd1 | 122.2 (3) | C19—C20—C15 | 121.3 (4) |
C1—N1—C8 | 108.0 (3) | C19—C20—N2 | 128.4 (3) |
C1—N1—Pd1 | 121.8 (2) | C15—C20—N2 | 110.3 (3) |
C8—N1—Pd1 | 130.2 (2) | C22—C21—C13 | 123.0 (4) |
N1—C1—C9 | 125.1 (4) | C22—C21—H21 | 118.5 |
N1—C1—C2 | 112.2 (3) | C13—C21—H21 | 118.5 |
C9—C1—C2 | 122.5 (3) | O2—C22—C21 | 128.7 (4) |
C3—C2—C1 | 100.7 (3) | O2—C22—H22 | 115.6 |
C3—C2—C11 | 112.4 (3) | C21—C22—H22 | 115.6 |
C1—C2—C11 | 112.4 (3) | C14—C23—H23A | 109.5 |
C3—C2—C12 | 111.7 (3) | C14—C23—H23B | 109.5 |
C1—C2—C12 | 109.3 (3) | H23A—C23—H23B | 109.5 |
C11—C2—C12 | 110.1 (3) | C14—C23—H23C | 109.5 |
C4—C3—C8 | 121.0 (4) | H23A—C23—H23C | 109.5 |
C4—C3—C2 | 130.2 (4) | H23B—C23—H23C | 109.5 |
C8—C3—C2 | 108.8 (3) | C14—C24—H24A | 109.5 |
C3—C4—C5 | 118.9 (4) | C14—C24—H24B | 109.5 |
C3—C4—H4 | 120.5 | H24A—C24—H24B | 109.5 |
C5—C4—H4 | 120.5 | C14—C24—H24C | 109.5 |
C4—C5—C6 | 120.2 (4) | H24A—C24—H24C | 109.5 |
C4—C5—H5 | 119.9 | H24B—C24—H24C | 109.5 |
C6—C5—H5 | 119.9 | O3iii—Pd3—O3 | 180.000 (1) |
C5—C6—C7 | 121.0 (4) | O3iii—Pd3—N3 | 88.92 (11) |
C5—C6—H6 | 119.5 | O3—Pd3—N3 | 91.08 (11) |
C7—C6—H6 | 119.5 | O3iii—Pd3—N3iii | 91.08 (11) |
C8—C7—C6 | 118.5 (3) | O3—Pd3—N3iii | 88.92 (11) |
C8—C7—H7 | 120.7 | N3—Pd3—N3iii | 179.999 (1) |
C6—C7—H7 | 120.7 | C34—O3—Pd3 | 122.8 (2) |
C7—C8—C3 | 120.2 (3) | C25—N3—C32 | 108.0 (3) |
C7—C8—N1 | 129.8 (3) | C25—N3—Pd3 | 121.4 (2) |
C3—C8—N1 | 109.9 (3) | C32—N3—Pd3 | 130.4 (2) |
C10—C9—C1 | 123.7 (4) | N3—C25—C33 | 125.6 (3) |
C10—C9—H9 | 118.1 | N3—C25—C26 | 112.3 (3) |
C1—C9—H9 | 118.1 | C33—C25—C26 | 122.1 (3) |
O1—C10—C9 | 128.5 (4) | C27—C26—C25 | 100.5 (3) |
O1—C10—H10 | 115.7 | C27—C26—C36 | 111.4 (3) |
C9—C10—H10 | 115.7 | C25—C26—C36 | 108.9 (3) |
C2—C11—H11A | 109.5 | C27—C26—C35 | 113.6 (3) |
C2—C11—H11B | 109.5 | C25—C26—C35 | 112.3 (3) |
H11A—C11—H11B | 109.5 | C36—C26—C35 | 109.7 (3) |
C2—C11—H11C | 109.5 | C28—C27—C32 | 120.2 (4) |
H11A—C11—H11C | 109.5 | C28—C27—C26 | 130.8 (4) |
H11B—C11—H11C | 109.5 | C32—C27—C26 | 109.0 (3) |
C2—C12—H12A | 109.5 | C29—C28—C27 | 119.1 (4) |
C2—C12—H12B | 109.5 | C29—C28—H28 | 120.4 |
H12A—C12—H12B | 109.5 | C27—C28—H28 | 120.4 |
C2—C12—H12C | 109.5 | C28—C29—C30 | 120.0 (4) |
H12A—C12—H12C | 109.5 | C28—C29—H29 | 120.0 |
H12B—C12—H12C | 109.5 | C30—C29—H29 | 120.0 |
O2ii—Pd2—O2 | 180.0 | C29—C30—C31 | 121.7 (4) |
O2ii—Pd2—N2ii | 90.13 (11) | C29—C30—H30 | 119.1 |
O2—Pd2—N2ii | 89.87 (11) | C31—C30—H30 | 119.1 |
O2ii—Pd2—N2 | 89.87 (11) | C32—C31—C30 | 117.8 (4) |
O2—Pd2—N2 | 90.13 (11) | C32—C31—H31 | 121.1 |
N2ii—Pd2—N2 | 179.999 (1) | C30—C31—H31 | 121.1 |
C22—O2—Pd2 | 122.6 (2) | C31—C32—C27 | 121.1 (3) |
C13—N2—C20 | 108.2 (3) | C31—C32—N3 | 129.0 (3) |
C13—N2—Pd2 | 122.1 (2) | C27—C32—N3 | 109.9 (3) |
C20—N2—Pd2 | 129.4 (2) | C34—C33—C25 | 124.3 (4) |
N2—C13—C21 | 125.5 (3) | C34—C33—H33 | 117.8 |
N2—C13—C14 | 111.9 (3) | C25—C33—H33 | 117.8 |
C21—C13—C14 | 122.6 (3) | O3—C34—C33 | 127.6 (4) |
C15—C14—C13 | 101.2 (3) | O3—C34—H34 | 116.2 |
C15—C14—C24 | 111.8 (3) | C33—C34—H34 | 116.2 |
C13—C14—C24 | 111.2 (3) | C26—C35—H35A | 109.5 |
C15—C14—C23 | 111.8 (3) | C26—C35—H35B | 109.5 |
C13—C14—C23 | 110.8 (3) | H35A—C35—H35B | 109.5 |
C24—C14—C23 | 109.9 (3) | C26—C35—H35C | 109.5 |
C16—C15—C20 | 119.8 (4) | H35A—C35—H35C | 109.5 |
C16—C15—C14 | 131.8 (4) | H35B—C35—H35C | 109.5 |
C20—C15—C14 | 108.3 (3) | C26—C36—H36A | 109.5 |
C15—C16—C17 | 118.9 (4) | C26—C36—H36B | 109.5 |
C15—C16—H16 | 120.5 | H36A—C36—H36B | 109.5 |
C17—C16—H16 | 120.5 | C26—C36—H36C | 109.5 |
C18—C17—C16 | 120.7 (4) | H36A—C36—H36C | 109.5 |
C18—C17—H17 | 119.6 | H36B—C36—H36C | 109.5 |
C16—C17—H17 | 119.6 |
Symmetry codes: (i) −x, −y, −z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y+2, −z+1. |
Cg1 and Cg2 are the centroids of the benzene C27–C32 and C3–C8 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2ii | 0.95 | 2.40 | 3.353 (5) | 177 |
C7—H7···O1i | 0.95 | 2.34 | 2.965 (4) | 123 |
C19—H19···O2ii | 0.95 | 2.27 | 2.860 (5) | 120 |
C31—H31···O3iii | 0.95 | 2.25 | 2.861 (5) | 121 |
C9—H9···Cg1iv | 0.95 | 2.85 | 3.794 (5) | 170 |
C33—H33···Cg2ii | 0.95 | 2.76 | 3.630 (4) | 153 |
Symmetry codes: (i) −x, −y, −z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y+2, −z+1; (iv) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Pd(C12H12NO)2] |
Mr | 478.85 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 10.453 (2), 12.669 (3), 13.056 (3) |
α, β, γ (°) | 87.750 (3), 73.271 (3), 70.565 (3) |
V (Å3) | 1558.5 (6) |
Z | 3 |
Radiation type | Mo Kα |
µ (mm−1) | 0.92 |
Crystal size (mm) | 0.18 × 0.09 × 0.06 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.853, 0.947 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13381, 6083, 4905 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.095, 1.03 |
No. of reflections | 6083 |
No. of parameters | 403 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.35, −0.75 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
Cg1 and Cg2 are the centroids of the benzene C27–C32 and C3–C8 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.95 | 2.40 | 3.353 (5) | 177 |
C7—H7···O1ii | 0.95 | 2.34 | 2.965 (4) | 123 |
C19—H19···O2i | 0.95 | 2.27 | 2.860 (5) | 120 |
C31—H31···O3iii | 0.95 | 2.25 | 2.861 (5) | 121 |
C9—H9···Cg1iv | 0.95 | 2.85 | 3.794 (5) | 170 |
C33—H33···Cg2i | 0.95 | 2.76 | 3.630 (4) | 153 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x, −y, −z; (iii) −x+1, −y+2, −z+1; (iv) x, y−1, z. |
Acknowledgements
The authors thank the University of Malaya for funding this study (FRGS grant No. FP004/2010B).
References
Barbour, L. J. (2001). J. Supramol. Chem, 1, 189–191. CrossRef CAS Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Khaledi, H., Mohd Ali, H. & Olmstead, M. M. (2011). Eur. J. Inorg. Chem. pp. 2394–2404. CrossRef Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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We have recently reported the reaction of 2-(diformylmethylidene)-3,3-dimethylindole, I, (Fig. 2), with palladium(II) ion to produce the complex II (Khaledi et al., 2011). As was reported, further recrystallization of the obtained N2O2-coordinated PdII complex from a mixture of DMF and pyridine led to the formation of acyl-palladium complexes III & IV. We were surprised to discover that leaving the recrystallization solution at room temperature for a longer time gave rise to slow disappearance of crystals of III & IV and formation of the orange crystals of the title compound. Herein, we report the crystal structure of the obtained PdII complex.
The crystal structure is composed of three square planar centrosymmetric complexes. In each molecule, two monoanionic ligands chelate the PdII ion in an N,O-mode to form two six-membered rings with the metal atom. The O—Pd—N bite angles are 90.38 (11), 90.13 (11) and 91.08 (11)° for the complexes of Pd1, Pd2 and Pd3, respectively. The three complexes have little difference in their geometries, but differ more in their intermolecular interactions. The Pd1 and Pd3 complexes are connected through C—H···π interactions (Table 1), forming infinite layers parallel to the ac plane. The layers are further linked into a three dimensional network via C—H···O hydrogen bonds (Table 1) formed between Pd1 and Pd2 molecules. Intramolecular C—H···O hydrogen bonding occurs in all three complexes.