organic compounds
1-Carboxymethyl-3-octylimidazolium bromide
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: khaledi@siswa.um.edu.my
In the title compound, C13H23N2O2+·Br−, the octyl chain has an all-trans conformation. In the crystal, the cations are linked by C—H⋯O bonds into a zigzag chain along the b axis. The bromide anions further link the chains via C—H⋯Br interactions into a two-dimensional array parallel to the ab plane. An O—H⋯Br interaction is also observed.
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811022094/is2721sup1.cif
contains datablocks I, New_Global_Publ_Block. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811022094/is2721Isup2.hkl
A solution of bromoacetic acid (1 g, 7.2 mmol) and octylimidazole (1.29 g, 7.2 mmol) in dry 1,4-dioxane (10 ml) was stirred under nitrogen atmosphere at 70 °C for 7 hr. The solution was then poured into dichloromethane (25 ml) and extracted with distilled water (50 ml). The aqueous solution was evaporated under vacuum to give a viscous oil which crystallized from THF to yield the colorless crystals of the title compound.
The C-bound H atoms were placed at calculated positions [C—H distances of 0.95 (Ar), 0.98 (methyl) and 0.99 (methylene) Å] and refined as riding atoms, with Uiso(H) set to 1.2(1.5 for methyl)Ueq(C). The carboxylic hydrogen atom was located in a difference Fourier map and refind with a dinstance restraint of O—H 0.84 (2) Å. The maximum and minimum residual electron density peaks of 1.25 and -2.19 e Å-3, respectively, were located 2.06 and 1.85 Å from atom Br1.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius. | |
Fig. 2. Packing view looking down the crystallographic b axis. |
C13H23N2O2+·Br− | F(000) = 664 |
Mr = 319.24 | Dx = 1.430 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9093 reflections |
a = 7.6745 (2) Å | θ = 2.7–30.4° |
b = 4.6176 (1) Å | µ = 2.77 mm−1 |
c = 41.8663 (9) Å | T = 100 K |
β = 92.167 (1)° | Plate, colorless |
V = 1482.59 (6) Å3 | 0.21 × 0.19 × 0.06 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 2761 independent reflections |
Radiation source: fine-focus sealed tube | 2678 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.594, Tmax = 0.851 | k = −5→5 |
10905 measured reflections | l = −50→50 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.43 | w = 1/[σ2(Fo2) + (0.P)2 + 5.6415P] where P = (Fo2 + 2Fc2)/3 |
2761 reflections | (Δ/σ)max < 0.001 |
167 parameters | Δρmax = 1.25 e Å−3 |
1 restraint | Δρmin = −2.19 e Å−3 |
C13H23N2O2+·Br− | V = 1482.59 (6) Å3 |
Mr = 319.24 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.6745 (2) Å | µ = 2.77 mm−1 |
b = 4.6176 (1) Å | T = 100 K |
c = 41.8663 (9) Å | 0.21 × 0.19 × 0.06 mm |
β = 92.167 (1)° |
Bruker APEXII CCD diffractometer | 2761 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2678 reflections with I > 2σ(I) |
Tmin = 0.594, Tmax = 0.851 | Rint = 0.023 |
10905 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 1 restraint |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.43 | Δρmax = 1.25 e Å−3 |
2761 reflections | Δρmin = −2.19 e Å−3 |
167 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.10811 (5) | 0.60448 (9) | 0.158623 (9) | 0.01633 (12) | |
O1 | 0.1327 (4) | 0.9207 (7) | 0.22540 (7) | 0.0206 (6) | |
H1 | 0.140 (6) | 0.823 (9) | 0.2087 (7) | 0.025* | |
O2 | 0.3056 (4) | 0.5633 (7) | 0.24528 (7) | 0.0223 (7) | |
N1 | 0.3042 (4) | 0.7879 (7) | 0.30550 (7) | 0.0135 (7) | |
N2 | 0.3636 (4) | 0.4977 (8) | 0.34476 (7) | 0.0141 (7) | |
C1 | 0.2224 (5) | 0.7809 (9) | 0.24846 (9) | 0.0145 (8) | |
C2 | 0.2071 (6) | 0.9390 (9) | 0.27999 (9) | 0.0179 (9) | |
H2A | 0.2530 | 1.1383 | 0.2780 | 0.021* | |
H2B | 0.0829 | 0.9524 | 0.2853 | 0.021* | |
C3 | 0.2346 (5) | 0.6121 (9) | 0.32676 (9) | 0.0144 (8) | |
H3 | 0.1137 | 0.5747 | 0.3287 | 0.017* | |
C4 | 0.4832 (5) | 0.7869 (10) | 0.31017 (10) | 0.0191 (9) | |
H4 | 0.5648 | 0.8927 | 0.2983 | 0.023* | |
C5 | 0.5201 (5) | 0.6074 (10) | 0.33479 (9) | 0.0191 (9) | |
H5 | 0.6328 | 0.5640 | 0.3437 | 0.023* | |
C6 | 0.3422 (5) | 0.3118 (9) | 0.37260 (9) | 0.0168 (9) | |
H6A | 0.4475 | 0.1900 | 0.3759 | 0.020* | |
H6B | 0.2413 | 0.1816 | 0.3686 | 0.020* | |
C7 | 0.3137 (5) | 0.4881 (9) | 0.40246 (9) | 0.0163 (8) | |
H7A | 0.2055 | 0.6032 | 0.3994 | 0.020* | |
H7B | 0.4120 | 0.6248 | 0.4059 | 0.020* | |
C8 | 0.2994 (5) | 0.2982 (9) | 0.43200 (9) | 0.0172 (8) | |
H8A | 0.4069 | 0.1809 | 0.4348 | 0.021* | |
H8B | 0.2002 | 0.1632 | 0.4286 | 0.021* | |
C9 | 0.2731 (5) | 0.4719 (9) | 0.46238 (9) | 0.0158 (8) | |
H9A | 0.3717 | 0.6083 | 0.4656 | 0.019* | |
H9B | 0.1651 | 0.5879 | 0.4596 | 0.019* | |
C10 | 0.2602 (6) | 0.2852 (10) | 0.49212 (10) | 0.0195 (9) | |
H10A | 0.3684 | 0.1697 | 0.4949 | 0.023* | |
H10B | 0.1618 | 0.1484 | 0.4889 | 0.023* | |
C11 | 0.2332 (5) | 0.4592 (9) | 0.52259 (9) | 0.0162 (9) | |
H11A | 0.3315 | 0.5965 | 0.5258 | 0.019* | |
H11B | 0.1250 | 0.5744 | 0.5198 | 0.019* | |
C12 | 0.2207 (6) | 0.2733 (10) | 0.55249 (9) | 0.0196 (9) | |
H12A | 0.3290 | 0.1586 | 0.5554 | 0.023* | |
H12B | 0.1225 | 0.1359 | 0.5494 | 0.023* | |
C13 | 0.1934 (6) | 0.4506 (10) | 0.58268 (9) | 0.0215 (10) | |
H13A | 0.2926 | 0.5814 | 0.5864 | 0.032* | |
H13B | 0.1840 | 0.3199 | 0.6010 | 0.032* | |
H13C | 0.0860 | 0.5643 | 0.5800 | 0.032* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0160 (2) | 0.0183 (2) | 0.01477 (19) | 0.00006 (18) | 0.00112 (13) | −0.00132 (18) |
O1 | 0.0278 (15) | 0.0187 (17) | 0.0153 (14) | 0.0039 (14) | 0.0000 (12) | 0.0001 (13) |
O2 | 0.0315 (16) | 0.0190 (18) | 0.0164 (14) | 0.0086 (14) | 0.0024 (12) | −0.0021 (13) |
N1 | 0.0177 (16) | 0.0132 (17) | 0.0098 (15) | −0.0009 (14) | 0.0026 (13) | −0.0002 (13) |
N2 | 0.0145 (16) | 0.0162 (17) | 0.0118 (16) | −0.0005 (14) | 0.0018 (13) | 0.0000 (13) |
C1 | 0.0155 (19) | 0.015 (2) | 0.0131 (19) | −0.0032 (17) | 0.0029 (15) | 0.0017 (16) |
C2 | 0.027 (2) | 0.010 (2) | 0.0162 (19) | 0.0048 (18) | 0.0005 (16) | 0.0010 (16) |
C3 | 0.0160 (18) | 0.0128 (19) | 0.0144 (18) | −0.0016 (17) | 0.0004 (14) | −0.0021 (17) |
C4 | 0.0145 (19) | 0.025 (2) | 0.018 (2) | −0.0043 (18) | 0.0032 (16) | −0.0028 (18) |
C5 | 0.0131 (18) | 0.026 (2) | 0.018 (2) | 0.0021 (19) | 0.0008 (15) | −0.0008 (19) |
C6 | 0.021 (2) | 0.010 (2) | 0.019 (2) | −0.0004 (17) | −0.0022 (16) | 0.0039 (16) |
C7 | 0.0177 (19) | 0.016 (2) | 0.0150 (19) | 0.0011 (17) | 0.0002 (15) | 0.0010 (16) |
C8 | 0.0175 (19) | 0.015 (2) | 0.019 (2) | 0.0016 (17) | 0.0007 (16) | 0.0014 (17) |
C9 | 0.0159 (19) | 0.015 (2) | 0.0166 (19) | 0.0021 (16) | −0.0006 (15) | 0.0014 (16) |
C10 | 0.020 (2) | 0.020 (2) | 0.019 (2) | 0.0037 (18) | 0.0011 (16) | −0.0003 (18) |
C11 | 0.0158 (19) | 0.014 (2) | 0.019 (2) | 0.0012 (16) | 0.0013 (16) | 0.0010 (17) |
C12 | 0.021 (2) | 0.021 (2) | 0.017 (2) | 0.0009 (18) | 0.0031 (16) | 0.0011 (18) |
C13 | 0.025 (2) | 0.024 (3) | 0.016 (2) | 0.0012 (19) | 0.0033 (16) | −0.0001 (18) |
O1—C1 | 1.332 (5) | C7—H7A | 0.9900 |
O1—H1 | 0.837 (19) | C7—H7B | 0.9900 |
O2—C1 | 1.200 (5) | C8—C9 | 1.524 (5) |
N1—C3 | 1.331 (5) | C8—H8A | 0.9900 |
N1—C4 | 1.381 (5) | C8—H8B | 0.9900 |
N1—C2 | 1.457 (5) | C9—C10 | 1.521 (6) |
N2—C3 | 1.331 (5) | C9—H9A | 0.9900 |
N2—C5 | 1.382 (5) | C9—H9B | 0.9900 |
N2—C6 | 1.462 (5) | C10—C11 | 1.528 (6) |
C1—C2 | 1.517 (5) | C10—H10A | 0.9900 |
C2—H2A | 0.9900 | C10—H10B | 0.9900 |
C2—H2B | 0.9900 | C11—C12 | 1.524 (6) |
C3—H3 | 0.9500 | C11—H11A | 0.9900 |
C4—C5 | 1.344 (6) | C11—H11B | 0.9900 |
C4—H4 | 0.9500 | C12—C13 | 1.527 (6) |
C5—H5 | 0.9500 | C12—H12A | 0.9900 |
C6—C7 | 1.515 (6) | C12—H12B | 0.9900 |
C6—H6A | 0.9900 | C13—H13A | 0.9800 |
C6—H6B | 0.9900 | C13—H13B | 0.9800 |
C7—C8 | 1.523 (5) | C13—H13C | 0.9800 |
C1—O1—H1 | 107 (3) | C7—C8—C9 | 113.0 (3) |
C3—N1—C4 | 109.0 (3) | C7—C8—H8A | 109.0 |
C3—N1—C2 | 125.1 (3) | C9—C8—H8A | 109.0 |
C4—N1—C2 | 125.7 (3) | C7—C8—H8B | 109.0 |
C3—N2—C5 | 108.6 (3) | C9—C8—H8B | 109.0 |
C3—N2—C6 | 125.5 (3) | H8A—C8—H8B | 107.8 |
C5—N2—C6 | 125.5 (3) | C10—C9—C8 | 113.6 (3) |
O2—C1—O1 | 126.0 (4) | C10—C9—H9A | 108.9 |
O2—C1—C2 | 123.9 (4) | C8—C9—H9A | 108.9 |
O1—C1—C2 | 110.0 (3) | C10—C9—H9B | 108.9 |
N1—C2—C1 | 110.7 (3) | C8—C9—H9B | 108.9 |
N1—C2—H2A | 109.5 | H9A—C9—H9B | 107.7 |
C1—C2—H2A | 109.5 | C9—C10—C11 | 113.6 (4) |
N1—C2—H2B | 109.5 | C9—C10—H10A | 108.8 |
C1—C2—H2B | 109.5 | C11—C10—H10A | 108.8 |
H2A—C2—H2B | 108.1 | C9—C10—H10B | 108.8 |
N2—C3—N1 | 108.2 (3) | C11—C10—H10B | 108.8 |
N2—C3—H3 | 125.9 | H10A—C10—H10B | 107.7 |
N1—C3—H3 | 125.9 | C12—C11—C10 | 113.9 (3) |
C5—C4—N1 | 106.9 (4) | C12—C11—H11A | 108.8 |
C5—C4—H4 | 126.6 | C10—C11—H11A | 108.8 |
N1—C4—H4 | 126.6 | C12—C11—H11B | 108.8 |
C4—C5—N2 | 107.3 (3) | C10—C11—H11B | 108.8 |
C4—C5—H5 | 126.3 | H11A—C11—H11B | 107.7 |
N2—C5—H5 | 126.3 | C11—C12—C13 | 113.1 (4) |
N2—C6—C7 | 111.5 (3) | C11—C12—H12A | 109.0 |
N2—C6—H6A | 109.3 | C13—C12—H12A | 109.0 |
C7—C6—H6A | 109.3 | C11—C12—H12B | 109.0 |
N2—C6—H6B | 109.3 | C13—C12—H12B | 109.0 |
C7—C6—H6B | 109.3 | H12A—C12—H12B | 107.8 |
H6A—C6—H6B | 108.0 | C12—C13—H13A | 109.5 |
C6—C7—C8 | 112.2 (3) | C12—C13—H13B | 109.5 |
C6—C7—H7A | 109.2 | H13A—C13—H13B | 109.5 |
C8—C7—H7A | 109.2 | C12—C13—H13C | 109.5 |
C6—C7—H7B | 109.2 | H13A—C13—H13C | 109.5 |
C8—C7—H7B | 109.2 | H13B—C13—H13C | 109.5 |
H7A—C7—H7B | 107.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6B···Br1i | 0.99 | 2.89 | 3.772 (4) | 148 |
C5—H5···Br1ii | 0.95 | 2.91 | 3.681 (4) | 139 |
C4—H4···O2iii | 0.95 | 2.25 | 3.151 (5) | 158 |
C3—H3···Br1i | 0.95 | 2.82 | 3.593 (4) | 139 |
C2—H2B···Br1iv | 0.99 | 2.90 | 3.676 (4) | 136 |
C2—H2A···O2v | 0.99 | 2.44 | 3.328 (5) | 150 |
O1—H1···Br1 | 0.84 (2) | 2.33 (2) | 3.153 (3) | 168 (4) |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x+1, y−1/2, −z+1/2; (iii) −x+1, y+1/2, −z+1/2; (iv) −x, y+1/2, −z+1/2; (v) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C13H23N2O2+·Br− |
Mr | 319.24 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 7.6745 (2), 4.6176 (1), 41.8663 (9) |
β (°) | 92.167 (1) |
V (Å3) | 1482.59 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.77 |
Crystal size (mm) | 0.21 × 0.19 × 0.06 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.594, 0.851 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10905, 2761, 2678 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.095, 1.43 |
No. of reflections | 2761 |
No. of parameters | 167 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.25, −2.19 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6B···Br1i | 0.99 | 2.89 | 3.772 (4) | 148 |
C5—H5···Br1ii | 0.95 | 2.91 | 3.681 (4) | 139 |
C4—H4···O2iii | 0.95 | 2.25 | 3.151 (5) | 158 |
C3—H3···Br1i | 0.95 | 2.82 | 3.593 (4) | 139 |
C2—H2B···Br1iv | 0.99 | 2.90 | 3.676 (4) | 136 |
C2—H2A···O2v | 0.99 | 2.44 | 3.328 (5) | 150 |
O1—H1···Br1 | 0.837 (19) | 2.33 (2) | 3.153 (3) | 168 (4) |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x+1, y−1/2, −z+1/2; (iii) −x+1, y+1/2, −z+1/2; (iv) −x, y+1/2, −z+1/2; (v) x, y+1, z. |
Acknowledgements
The authors thank the University of Malaya for funding this study (FRGS grant No. FP001/2010 A).
References
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The imidazolium ring is N-bound to a long alkyl chain, namely an octyl chain, and a carboxymethyl group. The alkyl chain adopts an all-trans conformation, as observed in similar structures (Wei et al., 2009; Chen et al., 2009). The carboxy group and the imidazolium ring subtend an N1—C2—C1 angle of 110.7 (3)°. In the crystal, the cationic moieties are bonded via C—H···O interactions (Table 1) into infinite chains along the b axis. The bromide anions link the cationic chains through C—H···Br interactions into layers parallel to the ab plane (Fig. 2).