metal-organic compounds
Piperazine-1,4-diium bis(pyridine-2,6-dicarboxylato-κ3O2,N,O6)cobaltate(II) tetrahydrate
aFaculty of Chemistry, North Tehran Branch, Islamic Azad University, Tehran, Iran, and bDepartment of Chemistry, Ferdowsi University of Mashhad, Mashhad, 91779, Iran
*Correspondence e-mail: a.raissi_shabari@yahoo.com
The 4H12N2)[Co(C7H3NO4)2]·4H2O, consists of one piperazinediium dication, one [Co(py-2,6-dc)2]2− dianion (where py-2,6-dc is pyridine-2,6-dicarboxylate) and four water molecules. The piperazinediium cation adopts a chair conformation and the CoII ion is six-coordinated in an N2O4 environment, having a distorted octahedral geometry. In the crystal, intermolecular O—H⋯O, N—H⋯O and weak C—H⋯O hydrogen bonds link the components, forming a three-dimensional network.
of the title complex, (CRelated literature
The et al. (2010). For bond lengths in a related cobaltate(II) complex, see: Pasdar et al. (2011). For bond lengths and angles in the piperazinediium dication, see: Sutherland & Harrison (2009); Allen et al. (1995). For positive-charge-assisted hydrogen bonds, see: Gilli et al. (1994).
of title compound was performed as a part of our project on the synthesis of new proton-transfer compounds, see: Raissi ShabariExperimental
Crystal data
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2005); cell X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and enCIFer (Allen et al., 2004).
Supporting information
10.1107/S1600536811023518/lh5266sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811023518/lh5266Isup2.hkl
A solution of Co(NO3)2.6H2O (2 mmol) in H2O was added to a solution of pyridine-2,6-dicarboxylic acid (4 mmol) in H2O and stirred (45 minutes) at room temperature. To the resulting solution, a solution of piperazine (4 mmol) in H2O was added and stirred (4 h) at 323 K. Suitable single crystals for X-ray analysis were obtained after slow evaporation at room temperature. IR (KBr, ν, cm-1): 3425, 3240, 3013, 3001, 2725, 2467, 1608, 1568, 1425, 1371, 1279, 1182, 1074, 1036, 914, 824, 760, 733, 692, 677, 592, 534.
H atoms of water molecules and N—H groups of cation were found in a difference Fourier map and refined isotropically. Carbon-bound H-atoms were placed in calculated positions, C—H = 0.93 Å (aromatic) and 0.97 Å (CH2), and were included in the
using a riding-model approximation, with Uiso = 1.2Ueq (C).Data collection: X-AREA (Stoe & Cie, 2005); cell
X-AREA (Stoe & Cie, 2005); data reduction: X-AREA (Stoe & Cie, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and enCIFer (Allen et al., 2004).Fig. 1. Molecular structure and atom labeling scheme for title complex with displacement ellipsoids drawn at the 50% probability level. |
(C4H12N2)[Co(C7H3NO4)2]·4H2O | F(000) = 1140 |
Mr = 549.36 | Dx = 1.628 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 6018 reflections |
a = 7.9537 (16) Å | θ = 2.5–29.1° |
b = 13.420 (3) Å | µ = 0.84 mm−1 |
c = 21.004 (4) Å | T = 150 K |
β = 90.55 (3)° | Plate, pink |
V = 2241.8 (8) Å3 | 0.5 × 0.4 × 0.15 mm |
Z = 4 |
Stoe IPDS 2T diffractometer | 6018 independent reflections |
Radiation source: fine-focus sealed tube | 5226 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
Detector resolution: 0.15 mm pixels mm-1 | θmax = 29.1°, θmin = 2.5° |
rotation method scans | h = −10→10 |
Absorption correction: numerical shape of crystal determined optically | k = −16→18 |
Tmin = 0.670, Tmax = 0.878 | l = −24→28 |
15339 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.077 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0326P)2 + 1.2111P] where P = (Fo2 + 2Fc2)/3 |
6018 reflections | (Δ/σ)max = 0.001 |
364 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
(C4H12N2)[Co(C7H3NO4)2]·4H2O | V = 2241.8 (8) Å3 |
Mr = 549.36 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.9537 (16) Å | µ = 0.84 mm−1 |
b = 13.420 (3) Å | T = 150 K |
c = 21.004 (4) Å | 0.5 × 0.4 × 0.15 mm |
β = 90.55 (3)° |
Stoe IPDS 2T diffractometer | 6018 independent reflections |
Absorption correction: numerical shape of crystal determined optically | 5226 reflections with I > 2σ(I) |
Tmin = 0.670, Tmax = 0.878 | Rint = 0.038 |
15339 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.077 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.48 e Å−3 |
6018 reflections | Δρmin = −0.33 e Å−3 |
364 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O10 | 0.26226 (16) | 0.55638 (11) | 0.28084 (7) | 0.0288 (3) | |
Co1 | 0.73056 (2) | 0.745668 (14) | 0.504511 (9) | 0.01278 (6) | |
C18 | 1.08242 (19) | 0.81672 (13) | 0.23202 (8) | 0.0195 (3) | |
H18A | 1.1280 | 0.7659 | 0.2043 | 0.023* | |
H18B | 1.1624 | 0.8712 | 0.2344 | 0.023* | |
C16 | 0.76380 (18) | 0.73170 (12) | 0.26866 (7) | 0.0173 (3) | |
H16A | 0.6828 | 0.6777 | 0.2667 | 0.021* | |
H16B | 0.7185 | 0.7836 | 0.2957 | 0.021* | |
C15 | 0.92728 (19) | 0.69397 (11) | 0.29675 (7) | 0.0176 (3) | |
H15A | 0.9091 | 0.6714 | 0.3400 | 0.021* | |
H15B | 0.9670 | 0.6378 | 0.2720 | 0.021* | |
C17 | 0.9172 (2) | 0.85410 (12) | 0.20509 (8) | 0.0197 (3) | |
H17A | 0.8759 | 0.9083 | 0.2311 | 0.024* | |
H17B | 0.9339 | 0.8793 | 0.1623 | 0.024* | |
N4 | 0.79141 (16) | 0.77200 (10) | 0.20359 (6) | 0.0165 (2) | |
N3 | 1.05640 (16) | 0.77441 (11) | 0.29680 (6) | 0.0175 (3) | |
O5 | 0.91680 (15) | 0.73565 (8) | 0.58111 (5) | 0.0206 (2) | |
N1 | 0.71594 (14) | 0.89536 (9) | 0.51050 (6) | 0.0128 (2) | |
O4 | 0.53764 (14) | 0.77007 (8) | 0.57578 (5) | 0.0188 (2) | |
O2 | 0.89349 (14) | 0.79723 (8) | 0.43015 (5) | 0.0191 (2) | |
O8 | 0.57909 (14) | 0.68290 (8) | 0.42961 (5) | 0.0187 (2) | |
C7 | 0.53098 (18) | 0.85856 (11) | 0.59591 (7) | 0.0145 (3) | |
C6 | 0.62806 (17) | 0.93522 (11) | 0.55788 (7) | 0.0132 (3) | |
C9 | 0.86203 (17) | 0.56523 (11) | 0.56247 (7) | 0.0128 (3) | |
C13 | 0.69018 (17) | 0.53516 (11) | 0.47424 (7) | 0.0124 (3) | |
O3 | 0.44917 (14) | 0.88780 (9) | 0.64298 (5) | 0.0190 (2) | |
O1 | 0.95932 (14) | 0.93309 (8) | 0.37446 (5) | 0.0188 (2) | |
O7 | 0.51331 (14) | 0.53761 (9) | 0.38257 (6) | 0.0218 (2) | |
N2 | 0.76472 (14) | 0.59801 (9) | 0.51494 (6) | 0.0116 (2) | |
C14 | 0.58397 (18) | 0.58788 (11) | 0.42379 (7) | 0.0148 (3) | |
C8 | 0.94256 (18) | 0.64790 (11) | 0.60154 (7) | 0.0149 (3) | |
C2 | 0.80213 (17) | 0.95197 (11) | 0.46993 (7) | 0.0128 (3) | |
C5 | 0.62615 (19) | 1.03742 (11) | 0.56736 (7) | 0.0159 (3) | |
H5 | 0.5664 | 1.0652 | 0.6008 | 0.019* | |
C12 | 0.71303 (17) | 0.43292 (11) | 0.47966 (7) | 0.0147 (3) | |
H12 | 0.6622 | 0.3892 | 0.4510 | 0.018* | |
C10 | 0.88885 (18) | 0.46439 (11) | 0.57169 (7) | 0.0163 (3) | |
H10 | 0.9551 | 0.4417 | 0.6054 | 0.020* | |
C1 | 0.89276 (17) | 0.89032 (11) | 0.42059 (7) | 0.0147 (3) | |
C3 | 0.80328 (18) | 1.05509 (11) | 0.47560 (7) | 0.0151 (3) | |
H3 | 0.8610 | 1.0946 | 0.4468 | 0.018* | |
C11 | 0.81438 (18) | 0.39770 (11) | 0.52927 (7) | 0.0169 (3) | |
H11 | 0.8322 | 0.3296 | 0.5340 | 0.020* | |
C4 | 0.71541 (19) | 1.09736 (11) | 0.52577 (8) | 0.0172 (3) | |
H4 | 0.7165 | 1.1661 | 0.5315 | 0.021* | |
O9 | 0.37881 (15) | 0.76948 (10) | 0.33746 (7) | 0.0244 (3) | |
O6 | 1.02757 (14) | 0.62407 (9) | 0.64909 (6) | 0.0223 (2) | |
O11 | 0.9680 (2) | 0.87887 (11) | 0.67821 (7) | 0.0312 (3) | |
O12 | 0.46115 (18) | 0.06341 (10) | 0.71858 (6) | 0.0260 (3) | |
H3B | 1.157 (3) | 0.7514 (16) | 0.3122 (11) | 0.029 (6)* | |
H4B | 0.828 (3) | 0.7228 (18) | 0.1787 (11) | 0.029 (6)* | |
H3A | 1.022 (3) | 0.8243 (18) | 0.3232 (11) | 0.031 (6)* | |
H4A | 0.694 (3) | 0.7923 (19) | 0.1846 (11) | 0.034 (6)* | |
H9B | 0.437 (3) | 0.7419 (18) | 0.3625 (12) | 0.031 (6)* | |
H10B | 0.324 (4) | 0.561 (2) | 0.3103 (15) | 0.050 (8)* | |
H10A | 0.321 (3) | 0.582 (2) | 0.2501 (14) | 0.051 (8)* | |
H9A | 0.432 (4) | 0.815 (2) | 0.3200 (14) | 0.052 (8)* | |
H12A | 0.508 (3) | 0.050 (2) | 0.7517 (14) | 0.051 (8)* | |
H12B | 0.464 (3) | 0.013 (2) | 0.6991 (14) | 0.045 (8)* | |
H11B | 0.950 (3) | 0.838 (2) | 0.6492 (14) | 0.046 (7)* | |
H11A | 0.989 (3) | 0.929 (2) | 0.6591 (13) | 0.046 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O10 | 0.0222 (6) | 0.0391 (8) | 0.0252 (7) | −0.0005 (5) | −0.0045 (5) | 0.0017 (6) |
Co1 | 0.01592 (9) | 0.00943 (9) | 0.01298 (10) | 0.00047 (7) | −0.00079 (6) | 0.00003 (7) |
C18 | 0.0185 (7) | 0.0244 (8) | 0.0158 (7) | −0.0038 (6) | 0.0021 (5) | −0.0007 (6) |
C16 | 0.0154 (6) | 0.0188 (7) | 0.0177 (7) | 0.0008 (5) | 0.0014 (5) | −0.0008 (5) |
C15 | 0.0211 (7) | 0.0161 (7) | 0.0156 (7) | 0.0040 (5) | −0.0001 (5) | 0.0027 (5) |
C17 | 0.0262 (8) | 0.0165 (7) | 0.0165 (7) | −0.0008 (6) | −0.0016 (6) | 0.0040 (6) |
N4 | 0.0158 (6) | 0.0190 (6) | 0.0147 (6) | 0.0039 (5) | −0.0044 (5) | 0.0003 (5) |
N3 | 0.0149 (6) | 0.0247 (7) | 0.0128 (6) | 0.0044 (5) | −0.0024 (5) | −0.0024 (5) |
O5 | 0.0275 (6) | 0.0138 (5) | 0.0202 (5) | −0.0027 (4) | −0.0086 (4) | −0.0010 (4) |
N1 | 0.0126 (5) | 0.0118 (5) | 0.0140 (6) | 0.0001 (4) | 0.0003 (4) | 0.0004 (4) |
O4 | 0.0240 (5) | 0.0130 (5) | 0.0194 (5) | −0.0025 (4) | 0.0056 (4) | −0.0011 (4) |
O2 | 0.0243 (5) | 0.0142 (5) | 0.0188 (5) | 0.0013 (4) | 0.0063 (4) | −0.0001 (4) |
O8 | 0.0235 (5) | 0.0147 (5) | 0.0177 (5) | 0.0013 (4) | −0.0082 (4) | 0.0011 (4) |
C7 | 0.0156 (6) | 0.0153 (7) | 0.0126 (6) | −0.0003 (5) | −0.0003 (5) | 0.0021 (5) |
C6 | 0.0149 (6) | 0.0127 (6) | 0.0120 (6) | 0.0004 (5) | 0.0000 (5) | 0.0002 (5) |
C9 | 0.0113 (6) | 0.0143 (6) | 0.0129 (6) | −0.0016 (5) | −0.0012 (5) | 0.0005 (5) |
C13 | 0.0113 (6) | 0.0139 (6) | 0.0120 (6) | 0.0000 (5) | −0.0007 (5) | −0.0011 (5) |
O3 | 0.0236 (5) | 0.0180 (5) | 0.0154 (5) | −0.0002 (4) | 0.0067 (4) | 0.0003 (4) |
O1 | 0.0230 (5) | 0.0181 (5) | 0.0154 (5) | −0.0018 (4) | 0.0053 (4) | 0.0013 (4) |
O7 | 0.0243 (6) | 0.0231 (6) | 0.0179 (5) | 0.0034 (4) | −0.0092 (4) | −0.0060 (4) |
N2 | 0.0111 (5) | 0.0121 (5) | 0.0117 (5) | −0.0002 (4) | −0.0005 (4) | 0.0004 (4) |
C14 | 0.0140 (6) | 0.0180 (7) | 0.0123 (6) | 0.0026 (5) | −0.0014 (5) | 0.0002 (5) |
C8 | 0.0137 (6) | 0.0170 (7) | 0.0139 (6) | −0.0036 (5) | −0.0013 (5) | −0.0015 (5) |
C2 | 0.0120 (6) | 0.0138 (6) | 0.0124 (6) | 0.0002 (5) | −0.0004 (5) | 0.0012 (5) |
C5 | 0.0191 (6) | 0.0145 (7) | 0.0141 (6) | 0.0000 (5) | 0.0005 (5) | −0.0031 (5) |
C12 | 0.0143 (6) | 0.0124 (6) | 0.0173 (7) | −0.0019 (5) | −0.0009 (5) | −0.0031 (5) |
C10 | 0.0152 (6) | 0.0163 (7) | 0.0174 (7) | 0.0002 (5) | −0.0033 (5) | 0.0045 (5) |
C1 | 0.0133 (6) | 0.0168 (7) | 0.0142 (6) | −0.0007 (5) | −0.0003 (5) | −0.0014 (5) |
C3 | 0.0160 (6) | 0.0126 (6) | 0.0168 (7) | −0.0020 (5) | −0.0004 (5) | 0.0018 (5) |
C11 | 0.0178 (6) | 0.0109 (6) | 0.0221 (7) | 0.0002 (5) | −0.0009 (6) | 0.0024 (5) |
C4 | 0.0204 (7) | 0.0109 (6) | 0.0202 (7) | −0.0016 (5) | −0.0003 (6) | −0.0007 (5) |
O9 | 0.0182 (5) | 0.0233 (6) | 0.0315 (7) | 0.0007 (5) | −0.0089 (5) | 0.0059 (5) |
O6 | 0.0243 (5) | 0.0227 (6) | 0.0196 (6) | −0.0062 (4) | −0.0116 (4) | 0.0031 (5) |
O11 | 0.0541 (9) | 0.0202 (6) | 0.0195 (6) | −0.0074 (6) | 0.0038 (6) | −0.0005 (5) |
O12 | 0.0400 (7) | 0.0204 (6) | 0.0175 (6) | 0.0034 (5) | −0.0031 (5) | −0.0012 (5) |
O10—H10B | 0.79 (3) | O8—C14 | 1.2817 (19) |
O10—H10A | 0.87 (3) | C7—O3 | 1.2518 (19) |
Co1—N2 | 2.0117 (13) | C7—C6 | 1.518 (2) |
Co1—N1 | 2.0162 (13) | C6—C5 | 1.386 (2) |
Co1—O8 | 2.1446 (12) | C9—N2 | 1.3321 (18) |
Co1—O2 | 2.1532 (13) | C9—C10 | 1.383 (2) |
Co1—O4 | 2.1787 (13) | C9—C8 | 1.518 (2) |
Co1—O5 | 2.1807 (13) | C13—N2 | 1.3357 (18) |
C18—N3 | 1.491 (2) | C13—C12 | 1.389 (2) |
C18—C17 | 1.511 (2) | C13—C14 | 1.5229 (19) |
C18—H18A | 0.9700 | O1—C1 | 1.2485 (19) |
C18—H18B | 0.9700 | O7—C14 | 1.2293 (18) |
C16—N4 | 1.488 (2) | C8—O6 | 1.2426 (18) |
C16—C15 | 1.510 (2) | C2—C3 | 1.389 (2) |
C16—H16A | 0.9700 | C2—C1 | 1.514 (2) |
C16—H16B | 0.9700 | C5—C4 | 1.388 (2) |
C15—N3 | 1.490 (2) | C5—H5 | 0.9300 |
C15—H15A | 0.9700 | C12—C11 | 1.394 (2) |
C15—H15B | 0.9700 | C12—H12 | 0.9300 |
C17—N4 | 1.488 (2) | C10—C11 | 1.391 (2) |
C17—H17A | 0.9700 | C10—H10 | 0.9300 |
C17—H17B | 0.9700 | C3—C4 | 1.391 (2) |
N4—H4B | 0.89 (2) | C3—H3 | 0.9300 |
N4—H4A | 0.91 (2) | C11—H11 | 0.9300 |
N3—H3B | 0.91 (2) | C4—H4 | 0.9300 |
N3—H3A | 0.91 (2) | O9—H9B | 0.79 (3) |
O5—C8 | 1.2692 (19) | O9—H9A | 0.83 (3) |
N1—C6 | 1.3335 (19) | O11—H11B | 0.83 (3) |
N1—C2 | 1.3358 (19) | O11—H11A | 0.81 (3) |
O4—C7 | 1.2619 (18) | O12—H12A | 0.80 (3) |
O2—C1 | 1.2652 (19) | O12—H12B | 0.79 (3) |
H10B—O10—H10A | 103 (3) | C6—N1—Co1 | 118.50 (10) |
N2—Co1—N1 | 169.23 (5) | C2—N1—Co1 | 119.77 (10) |
N2—Co1—O8 | 76.55 (5) | C7—O4—Co1 | 113.82 (10) |
N1—Co1—O8 | 113.87 (5) | C1—O2—Co1 | 115.50 (10) |
N2—Co1—O2 | 108.30 (5) | C14—O8—Co1 | 116.32 (9) |
N1—Co1—O2 | 76.15 (5) | O3—C7—O4 | 125.69 (14) |
O8—Co1—O2 | 86.10 (5) | O3—C7—C6 | 118.30 (13) |
N2—Co1—O4 | 99.70 (5) | O4—C7—C6 | 115.99 (13) |
N1—Co1—O4 | 76.46 (5) | N1—C6—C5 | 120.71 (14) |
O8—Co1—O4 | 99.71 (5) | N1—C6—C7 | 113.19 (12) |
O2—Co1—O4 | 151.99 (4) | C5—C6—C7 | 126.06 (13) |
N2—Co1—O5 | 76.63 (4) | N2—C9—C10 | 121.04 (13) |
N1—Co1—O5 | 93.13 (4) | N2—C9—C8 | 113.76 (13) |
O8—Co1—O5 | 152.85 (4) | C10—C9—C8 | 125.15 (13) |
O2—Co1—O5 | 98.38 (5) | N2—C13—C12 | 120.96 (13) |
O4—Co1—O5 | 88.87 (5) | N2—C13—C14 | 113.07 (12) |
N3—C18—C17 | 109.89 (13) | C12—C13—C14 | 125.97 (13) |
N3—C18—H18A | 109.7 | C9—N2—C13 | 121.49 (13) |
C17—C18—H18A | 109.7 | C9—N2—Co1 | 118.93 (10) |
N3—C18—H18B | 109.7 | C13—N2—Co1 | 119.58 (10) |
C17—C18—H18B | 109.7 | O7—C14—O8 | 126.80 (14) |
H18A—C18—H18B | 108.2 | O7—C14—C13 | 118.81 (13) |
N4—C16—C15 | 110.28 (12) | O8—C14—C13 | 114.39 (12) |
N4—C16—H16A | 109.6 | O6—C8—O5 | 126.53 (14) |
C15—C16—H16A | 109.6 | O6—C8—C9 | 118.02 (13) |
N4—C16—H16B | 109.6 | O5—C8—C9 | 115.43 (13) |
C15—C16—H16B | 109.6 | N1—C2—C3 | 120.99 (14) |
H16A—C16—H16B | 108.1 | N1—C2—C1 | 112.12 (12) |
N3—C15—C16 | 110.38 (12) | C3—C2—C1 | 126.89 (13) |
N3—C15—H15A | 109.6 | C6—C5—C4 | 118.47 (14) |
C16—C15—H15A | 109.6 | C6—C5—H5 | 120.8 |
N3—C15—H15B | 109.6 | C4—C5—H5 | 120.8 |
C16—C15—H15B | 109.6 | C13—C12—C11 | 118.08 (13) |
H15A—C15—H15B | 108.1 | C13—C12—H12 | 121.0 |
N4—C17—C18 | 110.13 (13) | C11—C12—H12 | 121.0 |
N4—C17—H17A | 109.6 | C9—C10—C11 | 118.40 (13) |
C18—C17—H17A | 109.6 | C9—C10—H10 | 120.8 |
N4—C17—H17B | 109.6 | C11—C10—H10 | 120.8 |
C18—C17—H17B | 109.6 | O1—C1—O2 | 125.15 (14) |
H17A—C17—H17B | 108.1 | O1—C1—C2 | 119.23 (13) |
C16—N4—C17 | 110.77 (12) | O2—C1—C2 | 115.62 (13) |
C16—N4—H4B | 108.8 (15) | C2—C3—C4 | 117.93 (14) |
C17—N4—H4B | 109.6 (15) | C2—C3—H3 | 121.0 |
C16—N4—H4A | 112.4 (15) | C4—C3—H3 | 121.0 |
C17—N4—H4A | 110.8 (16) | C10—C11—C12 | 120.02 (14) |
H4B—N4—H4A | 104 (2) | C10—C11—H11 | 120.0 |
C15—N3—C18 | 112.15 (12) | C12—C11—H11 | 120.0 |
C15—N3—H3B | 110.8 (14) | C5—C4—C3 | 120.28 (14) |
C18—N3—H3B | 109.0 (14) | C5—C4—H4 | 119.9 |
C15—N3—H3A | 108.6 (14) | C3—C4—H4 | 119.9 |
C18—N3—H3A | 108.7 (15) | H9B—O9—H9A | 110 (2) |
H3B—N3—H3A | 107 (2) | H11B—O11—H11A | 103 (3) |
C8—O5—Co1 | 114.39 (9) | H12A—O12—H12B | 104 (3) |
C6—N1—C2 | 121.59 (13) | ||
N4—C16—C15—N3 | 56.04 (16) | C8—C9—N2—Co1 | −2.77 (16) |
N3—C18—C17—N4 | −57.15 (17) | C12—C13—N2—C9 | −0.7 (2) |
C15—C16—N4—C17 | −58.43 (16) | C14—C13—N2—C9 | 179.69 (12) |
C18—C17—N4—C16 | 59.08 (16) | C12—C13—N2—Co1 | 179.15 (11) |
C16—C15—N3—C18 | −55.72 (17) | C14—C13—N2—Co1 | −0.48 (16) |
C17—C18—N3—C15 | 56.17 (17) | N1—Co1—N2—C9 | −12.6 (3) |
N2—Co1—O5—C8 | −8.50 (11) | O8—Co1—N2—C9 | −178.50 (11) |
N1—Co1—O5—C8 | 168.13 (11) | O2—Co1—N2—C9 | 100.29 (11) |
O8—Co1—O5—C8 | −17.59 (17) | O4—Co1—N2—C9 | −80.74 (11) |
O2—Co1—O5—C8 | −115.43 (11) | O5—Co1—N2—C9 | 5.75 (10) |
O4—Co1—O5—C8 | 91.75 (11) | N1—Co1—N2—C13 | 167.6 (2) |
N2—Co1—N1—C6 | −59.3 (3) | O8—Co1—N2—C13 | 1.66 (10) |
O8—Co1—N1—C6 | 105.67 (11) | O2—Co1—N2—C13 | −79.55 (11) |
O2—Co1—N1—C6 | −175.04 (11) | O4—Co1—N2—C13 | 99.42 (11) |
O4—Co1—N1—C6 | 10.90 (10) | O5—Co1—N2—C13 | −174.09 (11) |
O5—Co1—N1—C6 | −77.18 (11) | Co1—O8—C14—O7 | −176.49 (13) |
N2—Co1—N1—C2 | 116.5 (3) | Co1—O8—C14—C13 | 3.39 (16) |
O8—Co1—N1—C2 | −78.56 (11) | N2—C13—C14—O7 | 177.88 (14) |
O2—Co1—N1—C2 | 0.73 (10) | C12—C13—C14—O7 | −1.7 (2) |
O4—Co1—N1—C2 | −173.33 (11) | N2—C13—C14—O8 | −2.00 (18) |
O5—Co1—N1—C2 | 98.59 (11) | C12—C13—C14—O8 | 178.38 (14) |
N2—Co1—O4—C7 | 156.74 (10) | Co1—O5—C8—O6 | −171.44 (13) |
N1—Co1—O4—C7 | −12.98 (10) | Co1—O5—C8—C9 | 9.52 (16) |
O8—Co1—O4—C7 | −125.39 (10) | N2—C9—C8—O6 | 175.91 (13) |
O2—Co1—O4—C7 | −25.34 (16) | C10—C9—C8—O6 | −6.8 (2) |
O5—Co1—O4—C7 | 80.51 (11) | N2—C9—C8—O5 | −4.96 (19) |
N2—Co1—O2—C1 | −176.16 (10) | C10—C9—C8—O5 | 172.35 (14) |
N1—Co1—O2—C1 | −6.37 (10) | C6—N1—C2—C3 | −0.1 (2) |
O8—Co1—O2—C1 | 109.39 (11) | Co1—N1—C2—C3 | −175.70 (10) |
O4—Co1—O2—C1 | 6.00 (17) | C6—N1—C2—C1 | 179.60 (12) |
O5—Co1—O2—C1 | −97.55 (11) | Co1—N1—C2—C1 | 3.96 (15) |
N2—Co1—O8—C14 | −2.85 (11) | N1—C6—C5—C4 | 1.1 (2) |
N1—Co1—O8—C14 | 180.00 (10) | C7—C6—C5—C4 | −176.42 (13) |
O2—Co1—O8—C14 | 107.02 (11) | N2—C13—C12—C11 | 0.8 (2) |
O4—Co1—O8—C14 | −100.60 (11) | C14—C13—C12—C11 | −179.66 (13) |
O5—Co1—O8—C14 | 6.25 (17) | N2—C9—C10—C11 | 1.3 (2) |
Co1—O4—C7—O3 | −168.85 (12) | C8—C9—C10—C11 | −175.84 (14) |
Co1—O4—C7—C6 | 12.83 (16) | Co1—O2—C1—O1 | −169.47 (12) |
C2—N1—C6—C5 | −1.3 (2) | Co1—O2—C1—C2 | 10.27 (16) |
Co1—N1—C6—C5 | 174.37 (11) | N1—C2—C1—O1 | 170.25 (13) |
C2—N1—C6—C7 | 176.50 (12) | C3—C2—C1—O1 | −10.1 (2) |
Co1—N1—C6—C7 | −7.81 (15) | N1—C2—C1—O2 | −9.50 (18) |
O3—C7—C6—N1 | 177.41 (13) | C3—C2—C1—O2 | 170.14 (14) |
O4—C7—C6—N1 | −4.14 (18) | N1—C2—C3—C4 | 1.6 (2) |
O3—C7—C6—C5 | −4.9 (2) | C1—C2—C3—C4 | −178.01 (13) |
O4—C7—C6—C5 | 173.53 (14) | C9—C10—C11—C12 | −1.2 (2) |
C10—C9—N2—C13 | −0.4 (2) | C13—C12—C11—C10 | 0.2 (2) |
C8—C9—N2—C13 | 177.06 (12) | C6—C5—C4—C3 | 0.5 (2) |
C10—C9—N2—Co1 | 179.80 (11) | C2—C3—C4—C5 | −1.8 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12B···O3i | 0.79 (3) | 2.06 (3) | 2.8428 (18) | 174 (3) |
O11—H11B···O5 | 0.83 (3) | 2.00 (3) | 2.8290 (18) | 177 (3) |
O11—H11A···O1ii | 0.81 (3) | 2.02 (3) | 2.8173 (19) | 170 (3) |
O10—H10B···O7 | 0.79 (3) | 2.15 (3) | 2.9213 (19) | 165 (3) |
O10—H10A···O11iii | 0.87 (3) | 1.99 (3) | 2.854 (2) | 172 (3) |
O9—H9B···O8 | 0.79 (3) | 1.96 (3) | 2.7521 (18) | 175 (2) |
O9—H9A···O12iv | 0.83 (3) | 2.01 (3) | 2.840 (2) | 173 (3) |
N4—H4B···O3v | 0.89 (2) | 1.92 (2) | 2.7973 (18) | 165 (2) |
N4—H4A···O6iii | 0.91 (2) | 1.89 (2) | 2.7592 (17) | 161 (2) |
N3—H3B···O9vi | 0.91 (2) | 1.86 (2) | 2.6958 (18) | 152 (2) |
N3—H3A···O2 | 0.91 (2) | 2.50 (2) | 3.1126 (19) | 124.5 (18) |
N3—H3A···O1 | 0.91 (2) | 1.88 (2) | 2.7957 (18) | 176 (2) |
C18—H18B···O10vii | 0.97 | 2.58 | 3.457 (2) | 151 |
C17—H17B···O7vii | 0.97 | 2.36 | 3.127 (2) | 135 |
C16—H16B···O12iv | 0.97 | 2.52 | 3.293 (2) | 137 |
C15—H15B···O10vi | 0.97 | 2.60 | 3.261 (2) | 126 |
C15—H15A···O2 | 0.97 | 2.54 | 3.140 (2) | 120 |
Symmetry codes: (i) x, y−1, z; (ii) −x+2, −y+2, −z+1; (iii) x−1/2, −y+3/2, z−1/2; (iv) −x+1, −y+1, −z+1; (v) x+1/2, −y+3/2, z−1/2; (vi) x+1, y, z; (vii) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | (C4H12N2)[Co(C7H3NO4)2]·4H2O |
Mr | 549.36 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 150 |
a, b, c (Å) | 7.9537 (16), 13.420 (3), 21.004 (4) |
β (°) | 90.55 (3) |
V (Å3) | 2241.8 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.84 |
Crystal size (mm) | 0.5 × 0.4 × 0.15 |
Data collection | |
Diffractometer | Stoe IPDS 2T diffractometer |
Absorption correction | Numerical shape of crystal determined optically |
Tmin, Tmax | 0.670, 0.878 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15339, 6018, 5226 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.685 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.077, 1.07 |
No. of reflections | 6018 |
No. of parameters | 364 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.48, −0.33 |
Computer programs: X-AREA (Stoe & Cie, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999) and enCIFer (Allen et al., 2004).
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12B···O3i | 0.79 (3) | 2.06 (3) | 2.8428 (18) | 174 (3) |
O11—H11B···O5 | 0.83 (3) | 2.00 (3) | 2.8290 (18) | 177 (3) |
O11—H11A···O1ii | 0.81 (3) | 2.02 (3) | 2.8173 (19) | 170 (3) |
O10—H10B···O7 | 0.79 (3) | 2.15 (3) | 2.9213 (19) | 165 (3) |
O10—H10A···O11iii | 0.87 (3) | 1.99 (3) | 2.854 (2) | 172 (3) |
O9—H9B···O8 | 0.79 (3) | 1.96 (3) | 2.7521 (18) | 175 (2) |
O9—H9A···O12iv | 0.83 (3) | 2.01 (3) | 2.840 (2) | 173 (3) |
N4—H4B···O3v | 0.89 (2) | 1.92 (2) | 2.7973 (18) | 165 (2) |
N4—H4A···O6iii | 0.91 (2) | 1.89 (2) | 2.7592 (17) | 161 (2) |
N3—H3B···O9vi | 0.91 (2) | 1.86 (2) | 2.6958 (18) | 152 (2) |
N3—H3A···O2 | 0.91 (2) | 2.50 (2) | 3.1126 (19) | 124.5 (18) |
N3—H3A···O1 | 0.91 (2) | 1.88 (2) | 2.7957 (18) | 176 (2) |
C18—H18B···O10vii | 0.97 | 2.58 | 3.457 (2) | 150.8 |
C17—H17B···O7vii | 0.97 | 2.36 | 3.127 (2) | 135.1 |
C16—H16B···O12iv | 0.97 | 2.52 | 3.293 (2) | 136.8 |
C15—H15B···O10vi | 0.97 | 2.60 | 3.261 (2) | 126.0 |
C15—H15A···O2 | 0.97 | 2.54 | 3.140 (2) | 119.9 |
Symmetry codes: (i) x, y−1, z; (ii) −x+2, −y+2, −z+1; (iii) x−1/2, −y+3/2, z−1/2; (iv) −x+1, −y+1, −z+1; (v) x+1/2, −y+3/2, z−1/2; (vi) x+1, y, z; (vii) −x+3/2, y+1/2, −z+1/2. |
Acknowledgements
Support of this investigation by the North Tehran Branch, Islamic Azad University, is gratefully acknowledged.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The structure determination of title compound was performed as a part of a project on the synthesis of new proton-transfer compounds (Raissi Shabari et al., 2010).
The Co atom in title compound adopts a distorted octahedral coordination arising from four oxygen and two nitrogen atoms of two pyridine-2,6-dicarboxylato ligands, Fig. 1. The Co—O and Co—N bond lengths are similar to those in a recently published bis(pyridine-2,6-dicarboxylato)cobaltate(II) complex, (C6H10N2)[Co(C7H3NO4)2].5H2O (Pasdar et al., 2011). The organic dication adopts a typical chair geometry with normal bond lengths and angles (Sutherland & Harrison, 2009; Allen et al., 1995).
The protonated piperazine nitrogen atoms are involved in positive charge assisted (Gilli et al., 1994) N—H···O hydrogen bonds, atom N3 is involved with the O atoms of an adjacent carbonyl of one pyridine-2,6-dicarboxylato ligand and a neighbouring H2O molecule and atom N4 with two pyridine-2,6-dicarboxylato ligands in two neighbouring complexes.
Cations, anions and four crystallographically independent H2O molecules are hydrogen bonded in a three-dimensional network through N—H···O, O—H···O and weak C—H···O hydrogen bonds (Table 1).