organic compounds
1′′-Benzyl-1′-methyl-4′-(naphthalen-1-yl)naphthalene-2-spiro-3′-pyrrolidine-2′-spiro-3′′-indoline-1,2′′-dione
aDepartment of Physics, Kalasalingam University, Krishnankoil 626 126, India, bLaboratory of X-ray Crystallography, Indian Institute of Chemical Technology, Hyderabad 500 007, India, and cDepartment of Organic Chemistry, University of Madras, Guindy Campus, Chennai 600 025, India
*Correspondence e-mail: s_selvanayagam@rediffmail.com
In the title compound, C38H32N2O2, the pyrrolidine ring adopts an whereas the cyclohexanone ring in the tetrahydronaphthalene fused-ring system adopts a half-chair conformation. The benzyl ring is oriented at an angle of 67.1 (1)° with respect to the naphthyl ring system. Four intramolecular C—H⋯O close contacts and C—H⋯π interaction are observed. In the crystal, molecules associate via C—H⋯O hydrogen bonds, forming a C(12) chain motif along the ac plane.
Related literature
For general background to pyrrolidine derivatives, see: Mendoza et al. (2011); Morais et al. (2009); Pettersson et al. (2011); Shi et al. (2011). For a related structure, see: Selvanayagam et al. (2011). For the superposition of related structures, see: Gans & Shalloway (2001). For ring-puckering parameters, see: Cremer & Pople (1975); Nardelli (1983).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 and PLATON.
Supporting information
10.1107/S1600536811021908/ng5180sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811021908/ng5180Isup2.hkl
To a mixture of N-Benzyl isatin (1mmol), sarcosine (1mmol) and 2-napthalidene- 1,2,3,4-tetrahydronaphthalene-1-ones (1mmol) was added and heated under reflux in methanol (20ml) until the disappearance of the starting materials as evidenced by TLC. The solvent was removed under vacuo. The crude product was subjected to
using petroleum ether-ethyl acetate as Single crystals were grown by slow evaporation from methanol.H atoms were placed in idealized positions and allowed to ride on their parent atoms, with C—H distances of 0.93-0.97 Å, and Uiso(H) = 1.5Ueq(C) for methyl H and Uiso(H) = 1.2Ueq(C) for all other H atoms. During the structure analysis, it was observed that the
contains large accesible voids in the which tend to host unpredictable disordered solvent molecules. This affects the diffraction pattern, mostly a low scattering angles and was corrected with the SQUEEZE program (Spek, 2009).Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: 'ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009)'; software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level | |
Fig. 2. Superposition of (I) (red) with the similar reported structure of Selvanayagam et al. (2011) (blue). | |
Fig. 3. Molecular packing of the title compound, viewed along the c axis; H-bonds are shown as dashed lines forms a C(12) chain motif in unit cell. For the sake of clarity, H atoms, not involved in hydrogen bonds, have been omitted |
C38H32N2O2 | F(000) = 1160 |
Mr = 548.66 | Dx = 1.230 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 19526 reflections |
a = 12.6084 (6) Å | θ = 2.4–28.3° |
b = 14.3751 (7) Å | µ = 0.08 mm−1 |
c = 17.4021 (9) Å | T = 292 K |
β = 110.057 (1)° | Block, colourless |
V = 2962.8 (3) Å3 | 0.22 × 0.20 × 0.18 mm |
Z = 4 |
Bruker SMART APEX CCD area-detector diffractometer | 4812 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.000 |
Graphite monochromator | θmax = 28.0°, θmin = 1.7° |
ω scans | h = −16→15 |
7081 measured reflections | k = 0→18 |
7081 independent reflections | l = 0→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.065 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.149 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0582P)2 + 0.6156P] where P = (Fo2 + 2Fc2)/3 |
7081 reflections | (Δ/σ)max < 0.001 |
380 parameters | Δρmax = 0.19 e Å−3 |
0 restraints | Δρmin = −0.14 e Å−3 |
C38H32N2O2 | V = 2962.8 (3) Å3 |
Mr = 548.66 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.6084 (6) Å | µ = 0.08 mm−1 |
b = 14.3751 (7) Å | T = 292 K |
c = 17.4021 (9) Å | 0.22 × 0.20 × 0.18 mm |
β = 110.057 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 4812 reflections with I > 2σ(I) |
7081 measured reflections | Rint = 0.000 |
7081 independent reflections |
R[F2 > 2σ(F2)] = 0.065 | 0 restraints |
wR(F2) = 0.149 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.19 e Å−3 |
7081 reflections | Δρmin = −0.14 e Å−3 |
380 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.66021 (11) | 0.12013 (10) | 0.16760 (9) | 0.0662 (4) | |
O2 | 0.93723 (11) | 0.40608 (9) | 0.17479 (8) | 0.0626 (4) | |
N1 | 0.90128 (12) | 0.19586 (10) | 0.24061 (8) | 0.0493 (4) | |
N2 | 0.73609 (12) | 0.08330 (10) | 0.06975 (9) | 0.0515 (4) | |
C1 | 0.82372 (13) | 0.20914 (12) | 0.15647 (10) | 0.0438 (4) | |
C2 | 0.77474 (14) | 0.31053 (12) | 0.15932 (10) | 0.0440 (4) | |
C3 | 0.79927 (15) | 0.32572 (12) | 0.25429 (10) | 0.0483 (4) | |
H3 | 0.8622 | 0.3698 | 0.2731 | 0.058* | |
C4 | 0.84428 (17) | 0.23271 (13) | 0.29382 (11) | 0.0579 (5) | |
H4A | 0.8965 | 0.2410 | 0.3492 | 0.069* | |
H4B | 0.7833 | 0.1922 | 0.2949 | 0.069* | |
C5 | 0.72848 (14) | 0.13465 (12) | 0.13340 (11) | 0.0478 (4) | |
C6 | 0.82563 (15) | 0.11410 (13) | 0.04566 (10) | 0.0500 (4) | |
C7 | 0.8606 (2) | 0.07633 (15) | −0.01446 (12) | 0.0656 (6) | |
H7 | 0.8223 | 0.0270 | −0.0467 | 0.079* | |
C8 | 0.9545 (2) | 0.11472 (18) | −0.02475 (14) | 0.0774 (7) | |
H8 | 0.9791 | 0.0918 | −0.0658 | 0.093* | |
C9 | 1.0130 (2) | 0.18583 (18) | 0.02375 (15) | 0.0766 (7) | |
H9 | 1.0775 | 0.2093 | 0.0161 | 0.092* | |
C10 | 0.97681 (16) | 0.22356 (15) | 0.08476 (13) | 0.0617 (5) | |
H10 | 1.0168 | 0.2716 | 0.1179 | 0.074* | |
C11 | 0.88083 (14) | 0.18802 (12) | 0.09463 (11) | 0.0467 (4) | |
C12 | 0.64951 (14) | 0.32215 (14) | 0.10675 (11) | 0.0537 (5) | |
H12A | 0.6056 | 0.2749 | 0.1221 | 0.064* | |
H12B | 0.6235 | 0.3824 | 0.1180 | 0.064* | |
C13 | 0.62867 (17) | 0.31449 (15) | 0.01543 (12) | 0.0623 (5) | |
H13A | 0.6496 | 0.2528 | 0.0031 | 0.075* | |
H13B | 0.5490 | 0.3233 | −0.0149 | 0.075* | |
C14 | 0.69571 (18) | 0.38566 (14) | −0.01072 (12) | 0.0599 (5) | |
C15 | 0.6569 (2) | 0.42401 (19) | −0.08921 (14) | 0.0832 (7) | |
H15 | 0.5878 | 0.4050 | −0.1263 | 0.100* | |
C16 | 0.7195 (3) | 0.4893 (2) | −0.11224 (16) | 0.1014 (9) | |
H16 | 0.6921 | 0.5144 | −0.1647 | 0.122* | |
C17 | 0.8221 (3) | 0.51820 (19) | −0.05876 (17) | 0.0964 (8) | |
H17 | 0.8643 | 0.5621 | −0.0750 | 0.116* | |
C18 | 0.8620 (2) | 0.48169 (15) | 0.01912 (14) | 0.0729 (6) | |
H18 | 0.9314 | 0.5012 | 0.0555 | 0.087* | |
C19 | 0.79923 (17) | 0.41576 (13) | 0.04390 (11) | 0.0549 (5) | |
C20 | 0.84519 (15) | 0.38003 (12) | 0.12938 (11) | 0.0478 (4) | |
C21 | 0.70292 (15) | 0.36805 (13) | 0.27567 (10) | 0.0517 (4) | |
C22 | 0.69140 (15) | 0.46686 (14) | 0.27729 (10) | 0.0518 (4) | |
C23 | 0.77083 (18) | 0.52959 (14) | 0.26515 (12) | 0.0609 (5) | |
H23 | 0.8326 | 0.5062 | 0.2537 | 0.073* | |
C24 | 0.7590 (2) | 0.62308 (16) | 0.26981 (15) | 0.0765 (6) | |
H24 | 0.8134 | 0.6626 | 0.2628 | 0.092* | |
C25 | 0.6657 (3) | 0.66048 (18) | 0.28506 (16) | 0.0879 (8) | |
H25 | 0.6581 | 0.7246 | 0.2879 | 0.106* | |
C26 | 0.5871 (2) | 0.60358 (19) | 0.29565 (15) | 0.0805 (7) | |
H26 | 0.5245 | 0.6292 | 0.3045 | 0.097* | |
C27 | 0.59733 (16) | 0.50575 (16) | 0.29370 (11) | 0.0614 (5) | |
C28 | 0.51909 (18) | 0.4461 (2) | 0.30987 (13) | 0.0741 (6) | |
H28 | 0.4570 | 0.4710 | 0.3199 | 0.089* | |
C29 | 0.53320 (19) | 0.3533 (2) | 0.31101 (14) | 0.0767 (7) | |
H29 | 0.4823 | 0.3147 | 0.3237 | 0.092* | |
C30 | 0.62455 (18) | 0.31407 (16) | 0.29314 (13) | 0.0679 (6) | |
H30 | 0.6318 | 0.2497 | 0.2932 | 0.082* | |
C31 | 0.94324 (17) | 0.10143 (13) | 0.26161 (12) | 0.0614 (5) | |
H31A | 0.8823 | 0.0617 | 0.2622 | 0.092* | |
H31B | 1.0009 | 0.1013 | 0.3147 | 0.092* | |
H31C | 0.9741 | 0.0791 | 0.2218 | 0.092* | |
C32 | 0.65854 (17) | 0.00833 (14) | 0.03219 (13) | 0.0641 (5) | |
H32A | 0.6339 | 0.0158 | −0.0267 | 0.077* | |
H32B | 0.5924 | 0.0144 | 0.0483 | 0.077* | |
C33 | 0.70527 (15) | −0.08882 (13) | 0.05326 (11) | 0.0532 (4) | |
C34 | 0.64882 (19) | −0.16142 (15) | 0.00444 (14) | 0.0710 (6) | |
H34 | 0.5845 | −0.1495 | −0.0406 | 0.085* | |
C35 | 0.6867 (2) | −0.25106 (17) | 0.02169 (16) | 0.0816 (7) | |
H35 | 0.6479 | −0.2993 | −0.0118 | 0.098* | |
C36 | 0.7813 (2) | −0.27023 (16) | 0.08771 (16) | 0.0784 (7) | |
H36 | 0.8065 | −0.3312 | 0.0991 | 0.094* | |
C37 | 0.83818 (19) | −0.19893 (16) | 0.13677 (14) | 0.0720 (6) | |
H37 | 0.9024 | −0.2113 | 0.1817 | 0.086* | |
C38 | 0.80016 (17) | −0.10885 (14) | 0.11940 (13) | 0.0629 (5) | |
H38 | 0.8393 | −0.0607 | 0.1530 | 0.076* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0568 (8) | 0.0683 (9) | 0.0841 (10) | −0.0130 (7) | 0.0380 (8) | −0.0036 (7) |
O2 | 0.0576 (8) | 0.0656 (9) | 0.0608 (8) | −0.0172 (7) | 0.0154 (7) | −0.0010 (7) |
N1 | 0.0483 (8) | 0.0490 (9) | 0.0456 (8) | 0.0023 (7) | 0.0097 (7) | 0.0001 (7) |
N2 | 0.0499 (8) | 0.0495 (9) | 0.0508 (8) | −0.0032 (7) | 0.0117 (7) | −0.0047 (7) |
C1 | 0.0390 (9) | 0.0460 (10) | 0.0470 (9) | −0.0018 (7) | 0.0155 (7) | −0.0007 (7) |
C2 | 0.0414 (9) | 0.0457 (10) | 0.0443 (9) | −0.0004 (7) | 0.0141 (7) | −0.0012 (7) |
C3 | 0.0493 (10) | 0.0500 (10) | 0.0453 (9) | −0.0027 (8) | 0.0160 (8) | −0.0040 (8) |
C4 | 0.0690 (12) | 0.0570 (12) | 0.0454 (10) | 0.0044 (10) | 0.0167 (9) | 0.0002 (9) |
C5 | 0.0423 (9) | 0.0468 (10) | 0.0527 (10) | 0.0004 (8) | 0.0140 (8) | 0.0012 (8) |
C6 | 0.0523 (10) | 0.0520 (11) | 0.0436 (9) | 0.0109 (9) | 0.0140 (8) | 0.0058 (8) |
C7 | 0.0815 (15) | 0.0681 (13) | 0.0490 (11) | 0.0195 (11) | 0.0246 (11) | 0.0034 (9) |
C8 | 0.0981 (18) | 0.0828 (17) | 0.0657 (14) | 0.0330 (15) | 0.0466 (14) | 0.0160 (13) |
C9 | 0.0690 (14) | 0.0885 (17) | 0.0916 (17) | 0.0188 (13) | 0.0526 (13) | 0.0307 (14) |
C10 | 0.0527 (11) | 0.0637 (13) | 0.0761 (13) | 0.0049 (9) | 0.0317 (10) | 0.0120 (10) |
C11 | 0.0443 (9) | 0.0488 (10) | 0.0492 (9) | 0.0069 (8) | 0.0187 (8) | 0.0056 (8) |
C12 | 0.0433 (9) | 0.0569 (11) | 0.0580 (11) | 0.0025 (8) | 0.0134 (8) | −0.0015 (9) |
C13 | 0.0527 (11) | 0.0684 (13) | 0.0542 (11) | 0.0060 (10) | 0.0033 (9) | −0.0027 (10) |
C14 | 0.0675 (12) | 0.0586 (12) | 0.0504 (11) | 0.0119 (10) | 0.0160 (10) | −0.0013 (9) |
C15 | 0.0942 (17) | 0.0917 (18) | 0.0537 (13) | 0.0162 (14) | 0.0124 (12) | 0.0073 (12) |
C16 | 0.135 (3) | 0.105 (2) | 0.0610 (15) | 0.0160 (19) | 0.0290 (17) | 0.0285 (15) |
C17 | 0.131 (2) | 0.0851 (18) | 0.0820 (18) | −0.0011 (17) | 0.0482 (18) | 0.0265 (15) |
C18 | 0.0921 (16) | 0.0630 (13) | 0.0680 (13) | −0.0038 (12) | 0.0330 (12) | 0.0080 (11) |
C19 | 0.0675 (12) | 0.0478 (10) | 0.0519 (10) | 0.0057 (9) | 0.0239 (10) | 0.0016 (8) |
C20 | 0.0507 (10) | 0.0421 (9) | 0.0504 (10) | 0.0001 (8) | 0.0169 (8) | −0.0024 (8) |
C21 | 0.0510 (10) | 0.0605 (12) | 0.0443 (9) | −0.0029 (9) | 0.0171 (8) | −0.0057 (8) |
C22 | 0.0532 (10) | 0.0608 (12) | 0.0390 (9) | 0.0068 (9) | 0.0128 (8) | 0.0000 (8) |
C23 | 0.0669 (12) | 0.0585 (12) | 0.0603 (12) | 0.0074 (10) | 0.0257 (10) | 0.0012 (9) |
C24 | 0.0913 (17) | 0.0583 (14) | 0.0811 (15) | 0.0064 (12) | 0.0308 (13) | 0.0062 (11) |
C25 | 0.103 (2) | 0.0639 (15) | 0.0899 (18) | 0.0290 (15) | 0.0238 (15) | 0.0018 (13) |
C26 | 0.0754 (15) | 0.0865 (18) | 0.0754 (15) | 0.0311 (14) | 0.0203 (13) | −0.0077 (13) |
C27 | 0.0520 (11) | 0.0837 (15) | 0.0439 (10) | 0.0148 (10) | 0.0106 (8) | −0.0056 (10) |
C28 | 0.0530 (12) | 0.111 (2) | 0.0603 (13) | 0.0049 (13) | 0.0225 (10) | −0.0180 (13) |
C29 | 0.0623 (13) | 0.104 (2) | 0.0727 (14) | −0.0181 (13) | 0.0348 (12) | −0.0180 (13) |
C30 | 0.0674 (13) | 0.0735 (14) | 0.0693 (13) | −0.0117 (11) | 0.0315 (11) | −0.0112 (11) |
C31 | 0.0615 (12) | 0.0543 (12) | 0.0606 (12) | 0.0076 (9) | 0.0108 (10) | 0.0055 (9) |
C32 | 0.0551 (11) | 0.0584 (12) | 0.0620 (12) | −0.0054 (9) | −0.0014 (9) | −0.0089 (9) |
C33 | 0.0514 (10) | 0.0530 (11) | 0.0536 (10) | −0.0078 (9) | 0.0157 (9) | −0.0054 (9) |
C34 | 0.0669 (13) | 0.0632 (14) | 0.0726 (14) | −0.0075 (11) | 0.0108 (11) | −0.0107 (11) |
C35 | 0.0861 (17) | 0.0606 (14) | 0.0941 (17) | −0.0160 (13) | 0.0257 (15) | −0.0181 (13) |
C36 | 0.0867 (17) | 0.0550 (13) | 0.0996 (18) | 0.0026 (12) | 0.0399 (15) | 0.0072 (12) |
C37 | 0.0688 (14) | 0.0680 (14) | 0.0741 (14) | 0.0012 (11) | 0.0180 (11) | 0.0129 (12) |
C38 | 0.0624 (12) | 0.0567 (12) | 0.0615 (12) | −0.0075 (10) | 0.0107 (10) | −0.0039 (10) |
O1—C5 | 1.221 (2) | C17—C18 | 1.378 (3) |
O2—C20 | 1.218 (2) | C17—H17 | 0.9300 |
N1—C4 | 1.453 (2) | C18—C19 | 1.394 (3) |
N1—C31 | 1.457 (2) | C18—H18 | 0.9300 |
N1—C1 | 1.468 (2) | C19—C20 | 1.490 (3) |
N2—C5 | 1.362 (2) | C21—C30 | 1.370 (3) |
N2—C6 | 1.404 (2) | C21—C22 | 1.429 (3) |
N2—C32 | 1.451 (2) | C22—C23 | 1.416 (3) |
C1—C11 | 1.517 (2) | C22—C27 | 1.426 (3) |
C1—C5 | 1.555 (2) | C23—C24 | 1.358 (3) |
C1—C2 | 1.590 (2) | C23—H23 | 0.9300 |
C2—C12 | 1.539 (2) | C24—C25 | 1.398 (3) |
C2—C20 | 1.541 (2) | C24—H24 | 0.9300 |
C2—C3 | 1.589 (2) | C25—C26 | 1.346 (4) |
C3—C21 | 1.515 (2) | C25—H25 | 0.9300 |
C3—C4 | 1.522 (3) | C26—C27 | 1.414 (3) |
C3—H3 | 0.9800 | C26—H26 | 0.9300 |
C4—H4A | 0.9700 | C27—C28 | 1.407 (3) |
C4—H4B | 0.9700 | C28—C29 | 1.345 (3) |
C6—C7 | 1.379 (3) | C28—H28 | 0.9300 |
C6—C11 | 1.390 (3) | C29—C30 | 1.409 (3) |
C7—C8 | 1.372 (3) | C29—H29 | 0.9300 |
C7—H7 | 0.9300 | C30—H30 | 0.9300 |
C8—C9 | 1.369 (3) | C31—H31A | 0.9600 |
C8—H8 | 0.9300 | C31—H31B | 0.9600 |
C9—C10 | 1.401 (3) | C31—H31C | 0.9600 |
C9—H9 | 0.9300 | C32—C33 | 1.511 (3) |
C10—C11 | 1.378 (2) | C32—H32A | 0.9700 |
C10—H10 | 0.9300 | C32—H32B | 0.9700 |
C12—C13 | 1.523 (3) | C33—C38 | 1.376 (3) |
C12—H12A | 0.9700 | C33—C34 | 1.379 (3) |
C12—H12B | 0.9700 | C34—C35 | 1.371 (3) |
C13—C14 | 1.494 (3) | C34—H34 | 0.9300 |
C13—H13A | 0.9700 | C35—C36 | 1.370 (3) |
C13—H13B | 0.9700 | C35—H35 | 0.9300 |
C14—C19 | 1.394 (3) | C36—C37 | 1.369 (3) |
C14—C15 | 1.397 (3) | C36—H36 | 0.9300 |
C15—C16 | 1.372 (4) | C37—C38 | 1.378 (3) |
C15—H15 | 0.9300 | C37—H37 | 0.9300 |
C16—C17 | 1.373 (4) | C38—H38 | 0.9300 |
C16—H16 | 0.9300 | ||
C4—N1—C31 | 113.34 (15) | C16—C17—C18 | 119.5 (3) |
C4—N1—C1 | 106.40 (13) | C16—C17—H17 | 120.2 |
C31—N1—C1 | 115.58 (14) | C18—C17—H17 | 120.2 |
C5—N2—C6 | 111.11 (14) | C17—C18—C19 | 120.6 (2) |
C5—N2—C32 | 122.98 (16) | C17—C18—H18 | 119.7 |
C6—N2—C32 | 125.90 (16) | C19—C18—H18 | 119.7 |
N1—C1—C11 | 111.45 (13) | C18—C19—C14 | 119.87 (19) |
N1—C1—C5 | 111.05 (13) | C18—C19—C20 | 118.38 (18) |
C11—C1—C5 | 101.04 (13) | C14—C19—C20 | 121.75 (17) |
N1—C1—C2 | 102.78 (13) | O2—C20—C19 | 119.97 (17) |
C11—C1—C2 | 119.30 (14) | O2—C20—C2 | 120.77 (16) |
C5—C1—C2 | 111.43 (13) | C19—C20—C2 | 119.26 (15) |
C12—C2—C20 | 108.76 (14) | C30—C21—C22 | 118.20 (18) |
C12—C2—C3 | 113.42 (14) | C30—C21—C3 | 121.82 (18) |
C20—C2—C3 | 109.47 (13) | C22—C21—C3 | 119.98 (16) |
C12—C2—C1 | 114.28 (14) | C23—C22—C27 | 117.36 (18) |
C20—C2—C1 | 107.98 (13) | C23—C22—C21 | 123.22 (17) |
C3—C2—C1 | 102.66 (13) | C27—C22—C21 | 119.40 (18) |
C21—C3—C4 | 116.62 (15) | C24—C23—C22 | 121.6 (2) |
C21—C3—C2 | 115.11 (14) | C24—C23—H23 | 119.2 |
C4—C3—C2 | 105.01 (14) | C22—C23—H23 | 119.2 |
C21—C3—H3 | 106.5 | C23—C24—C25 | 120.6 (2) |
C4—C3—H3 | 106.5 | C23—C24—H24 | 119.7 |
C2—C3—H3 | 106.5 | C25—C24—H24 | 119.7 |
N1—C4—C3 | 102.79 (14) | C26—C25—C24 | 120.0 (2) |
N1—C4—H4A | 111.2 | C26—C25—H25 | 120.0 |
C3—C4—H4A | 111.2 | C24—C25—H25 | 120.0 |
N1—C4—H4B | 111.2 | C25—C26—C27 | 121.5 (2) |
C3—C4—H4B | 111.2 | C25—C26—H26 | 119.2 |
H4A—C4—H4B | 109.1 | C27—C26—H26 | 119.2 |
O1—C5—N2 | 124.20 (16) | C28—C27—C26 | 121.7 (2) |
O1—C5—C1 | 127.08 (16) | C28—C27—C22 | 119.3 (2) |
N2—C5—C1 | 108.64 (15) | C26—C27—C22 | 119.0 (2) |
C7—C6—C11 | 122.88 (18) | C29—C28—C27 | 120.6 (2) |
C7—C6—N2 | 127.01 (18) | C29—C28—H28 | 119.7 |
C11—C6—N2 | 110.04 (15) | C27—C28—H28 | 119.7 |
C8—C7—C6 | 117.1 (2) | C28—C29—C30 | 120.5 (2) |
C8—C7—H7 | 121.4 | C28—C29—H29 | 119.8 |
C6—C7—H7 | 121.4 | C30—C29—H29 | 119.8 |
C7—C8—C9 | 121.8 (2) | C21—C30—C29 | 121.9 (2) |
C7—C8—H8 | 119.1 | C21—C30—H30 | 119.0 |
C9—C8—H8 | 119.1 | C29—C30—H30 | 119.0 |
C8—C9—C10 | 120.6 (2) | N1—C31—H31A | 109.5 |
C8—C9—H9 | 119.7 | N1—C31—H31B | 109.5 |
C10—C9—H9 | 119.7 | H31A—C31—H31B | 109.5 |
C11—C10—C9 | 118.7 (2) | N1—C31—H31C | 109.5 |
C11—C10—H10 | 120.7 | H31A—C31—H31C | 109.5 |
C9—C10—H10 | 120.7 | H31B—C31—H31C | 109.5 |
C10—C11—C6 | 118.91 (17) | N2—C32—C33 | 115.50 (15) |
C10—C11—C1 | 131.72 (17) | N2—C32—H32A | 108.4 |
C6—C11—C1 | 109.17 (15) | C33—C32—H32A | 108.4 |
C13—C12—C2 | 112.77 (15) | N2—C32—H32B | 108.4 |
C13—C12—H12A | 109.0 | C33—C32—H32B | 108.4 |
C2—C12—H12A | 109.0 | H32A—C32—H32B | 107.5 |
C13—C12—H12B | 109.0 | C38—C33—C34 | 118.27 (19) |
C2—C12—H12B | 109.0 | C38—C33—C32 | 123.44 (17) |
H12A—C12—H12B | 107.8 | C34—C33—C32 | 118.29 (17) |
C14—C13—C12 | 110.80 (16) | C35—C34—C33 | 120.6 (2) |
C14—C13—H13A | 109.5 | C35—C34—H34 | 119.7 |
C12—C13—H13A | 109.5 | C33—C34—H34 | 119.7 |
C14—C13—H13B | 109.5 | C36—C35—C34 | 120.7 (2) |
C12—C13—H13B | 109.5 | C36—C35—H35 | 119.7 |
H13A—C13—H13B | 108.1 | C34—C35—H35 | 119.7 |
C19—C14—C15 | 118.5 (2) | C37—C36—C35 | 119.4 (2) |
C19—C14—C13 | 120.00 (17) | C37—C36—H36 | 120.3 |
C15—C14—C13 | 121.5 (2) | C35—C36—H36 | 120.3 |
C16—C15—C14 | 120.8 (2) | C36—C37—C38 | 119.9 (2) |
C16—C15—H15 | 119.6 | C36—C37—H37 | 120.1 |
C14—C15—H15 | 119.6 | C38—C37—H37 | 120.1 |
C15—C16—C17 | 120.8 (2) | C33—C38—C37 | 121.15 (19) |
C15—C16—H16 | 119.6 | C33—C38—H38 | 119.4 |
C17—C16—H16 | 119.6 | C37—C38—H38 | 119.4 |
C4—N1—C1—C11 | 170.62 (14) | C12—C13—C14—C19 | 30.5 (2) |
C31—N1—C1—C11 | −62.61 (19) | C12—C13—C14—C15 | −149.0 (2) |
C4—N1—C1—C5 | −77.56 (16) | C19—C14—C15—C16 | 0.4 (3) |
C31—N1—C1—C5 | 49.21 (19) | C13—C14—C15—C16 | 180.0 (2) |
C4—N1—C1—C2 | 41.70 (16) | C14—C15—C16—C17 | 0.3 (4) |
C31—N1—C1—C2 | 168.47 (14) | C15—C16—C17—C18 | −0.6 (4) |
N1—C1—C2—C12 | −143.34 (14) | C16—C17—C18—C19 | 0.1 (4) |
C11—C1—C2—C12 | 92.80 (18) | C17—C18—C19—C14 | 0.7 (3) |
C5—C1—C2—C12 | −24.3 (2) | C17—C18—C19—C20 | −178.7 (2) |
N1—C1—C2—C20 | 95.51 (15) | C15—C14—C19—C18 | −0.9 (3) |
C11—C1—C2—C20 | −28.35 (19) | C13—C14—C19—C18 | 179.53 (19) |
C5—C1—C2—C20 | −145.49 (14) | C15—C14—C19—C20 | 178.45 (18) |
N1—C1—C2—C3 | −20.09 (15) | C13—C14—C19—C20 | −1.1 (3) |
C11—C1—C2—C3 | −143.95 (14) | C18—C19—C20—O2 | −2.5 (3) |
C5—C1—C2—C3 | 98.91 (15) | C14—C19—C20—O2 | 178.12 (18) |
C12—C2—C3—C21 | −12.2 (2) | C18—C19—C20—C2 | 177.21 (17) |
C20—C2—C3—C21 | 109.49 (17) | C14—C19—C20—C2 | −2.2 (3) |
C1—C2—C3—C21 | −136.00 (15) | C12—C2—C20—O2 | 156.02 (17) |
C12—C2—C3—C4 | 117.47 (16) | C3—C2—C20—O2 | 31.6 (2) |
C20—C2—C3—C4 | −120.87 (15) | C1—C2—C20—O2 | −79.4 (2) |
C1—C2—C3—C4 | −6.35 (17) | C12—C2—C20—C19 | −23.7 (2) |
C31—N1—C4—C3 | −174.48 (14) | C3—C2—C20—C19 | −148.10 (15) |
C1—N1—C4—C3 | −46.38 (17) | C1—C2—C20—C19 | 100.85 (17) |
C21—C3—C4—N1 | 159.66 (15) | C4—C3—C21—C30 | −31.4 (2) |
C2—C3—C4—N1 | 30.92 (17) | C2—C3—C21—C30 | 92.3 (2) |
C6—N2—C5—O1 | −177.45 (17) | C4—C3—C21—C22 | 149.21 (17) |
C32—N2—C5—O1 | 3.8 (3) | C2—C3—C21—C22 | −87.09 (19) |
C6—N2—C5—C1 | −0.32 (19) | C30—C21—C22—C23 | 176.09 (18) |
C32—N2—C5—C1 | −179.08 (15) | C3—C21—C22—C23 | −4.5 (3) |
N1—C1—C5—O1 | 58.9 (2) | C30—C21—C22—C27 | −2.4 (3) |
C11—C1—C5—O1 | 177.17 (17) | C3—C21—C22—C27 | 177.04 (15) |
C2—C1—C5—O1 | −55.1 (2) | C27—C22—C23—C24 | 0.7 (3) |
N1—C1—C5—N2 | −118.17 (15) | C21—C22—C23—C24 | −177.78 (19) |
C11—C1—C5—N2 | 0.15 (17) | C22—C23—C24—C25 | −1.5 (3) |
C2—C1—C5—N2 | 127.90 (15) | C23—C24—C25—C26 | 0.3 (4) |
C5—N2—C6—C7 | 177.43 (18) | C24—C25—C26—C27 | 1.5 (4) |
C32—N2—C6—C7 | −3.9 (3) | C25—C26—C27—C28 | 175.9 (2) |
C5—N2—C6—C11 | 0.4 (2) | C25—C26—C27—C22 | −2.2 (3) |
C32—N2—C6—C11 | 179.10 (16) | C23—C22—C27—C28 | −177.11 (17) |
C11—C6—C7—C8 | 0.2 (3) | C21—C22—C27—C28 | 1.5 (3) |
N2—C6—C7—C8 | −176.48 (18) | C23—C22—C27—C26 | 1.0 (3) |
C6—C7—C8—C9 | 1.6 (3) | C21—C22—C27—C26 | 179.63 (18) |
C7—C8—C9—C10 | −1.6 (3) | C26—C27—C28—C29 | −177.2 (2) |
C8—C9—C10—C11 | −0.4 (3) | C22—C27—C28—C29 | 0.9 (3) |
C9—C10—C11—C6 | 2.1 (3) | C27—C28—C29—C30 | −2.3 (3) |
C9—C10—C11—C1 | 176.24 (18) | C22—C21—C30—C29 | 1.1 (3) |
C7—C6—C11—C10 | −2.1 (3) | C3—C21—C30—C29 | −178.35 (18) |
N2—C6—C11—C10 | 175.08 (16) | C28—C29—C30—C21 | 1.3 (3) |
C7—C6—C11—C1 | −177.46 (16) | C5—N2—C32—C33 | −105.3 (2) |
N2—C6—C11—C1 | −0.28 (19) | C6—N2—C32—C33 | 76.1 (2) |
N1—C1—C11—C10 | −56.4 (2) | N2—C32—C33—C38 | 17.9 (3) |
C5—C1—C11—C10 | −174.47 (19) | N2—C32—C33—C34 | −163.17 (19) |
C2—C1—C11—C10 | 63.1 (3) | C38—C33—C34—C35 | 0.0 (3) |
N1—C1—C11—C6 | 118.11 (15) | C32—C33—C34—C35 | −179.0 (2) |
C5—C1—C11—C6 | 0.08 (17) | C33—C34—C35—C36 | 0.0 (4) |
C2—C1—C11—C6 | −122.36 (16) | C34—C35—C36—C37 | 0.0 (4) |
C20—C2—C12—C13 | 53.7 (2) | C35—C36—C37—C38 | 0.0 (4) |
C3—C2—C12—C13 | 175.74 (15) | C34—C33—C38—C37 | −0.1 (3) |
C1—C2—C12—C13 | −67.0 (2) | C32—C33—C38—C37 | 178.8 (2) |
C2—C12—C13—C14 | −58.2 (2) | C36—C37—C38—C33 | 0.1 (3) |
Cg is the centroid of the N2/C5/C1/C11/C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C26—H26···O1i | 0.93 | 2.54 | 3.399 (3) | 154 |
C3—H3···O2 | 0.98 | 2.28 | 2.815 (2) | 113 |
C4—H4B···O1 | 0.97 | 2.46 | 3.055 (2) | 120 |
C10—H10···O2 | 0.93 | 2.53 | 3.182 (3) | 127 |
C12—H12A···O1 | 0.97 | 2.38 | 3.078 (2) | 128 |
C13—H13A···Cg | 0.97 | 2.56 | 3.238 (2) | 127 |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C38H32N2O2 |
Mr | 548.66 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 292 |
a, b, c (Å) | 12.6084 (6), 14.3751 (7), 17.4021 (9) |
β (°) | 110.057 (1) |
V (Å3) | 2962.8 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.22 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7081, 7081, 4812 |
Rint | 0.000 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.065, 0.149, 1.06 |
No. of reflections | 7081 |
No. of parameters | 380 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.19, −0.14 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), 'ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009)', SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg is the centroid of the N2/C5/C1/C11/C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C26—H26···O1i | 0.93 | 2.54 | 3.399 (3) | 154 |
C3—H3···O2 | 0.98 | 2.28 | 2.815 (2) | 113 |
C4—H4B···O1 | 0.97 | 2.46 | 3.055 (2) | 120 |
C10—H10···O2 | 0.93 | 2.53 | 3.182 (3) | 127 |
C12—H12A···O1 | 0.97 | 2.38 | 3.078 (2) | 128 |
C13—H13A···Cg | 0.97 | 2.56 | 3.238 (2) | 127 |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |
Acknowledgements
SS acknowledges the Department of Science and Technology (DST), India, for providing computing facilities under the DST-Fast Track Scheme. SS also thanks the Vice Chancellor and management of Kalasalingam University, Krishnankoil, for their support and encouragement.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyrrolidine derivatives are dual norepinephrine reuptake inhibitors and 5-HT(2A) partial agonists (Pettersson et al., 2011). These derivatives are also used as peptide deformylase inhibitors (Shi et al., 2011). These derivatives possess anti-angiogenic (Morais et al., 2009) and antimalarial (Mendoza et al., 2011) activities. In view of these importance and continuation of our work on the crystal structure analyis of spiro-pyrrolidine derivatives, we have undertaken the crystal structure determination of the title compound, and the results are presented here.
The X-ray study confirmed the molecular structure and atomic connectivity for (I), as illustrated in Fig. 1. The geometry of all the ring systems (except benzyl ring) in the present structure is comparable with the related reported structure (Selvanayagam et al., 2011). Fig. 2 shows a superposition of the pyrrolidine ring of (I) with this related reported structure, using Qmol (Gans & Shalloway, 2001); the r.m.s. deviation is 0.044 Å.
The sum of the angles at N1 of the pyrrolidine ring [335.3°] and N2 of the oxindole ring [360.1°] are in accordance with sp3 and sp2 hybridizations. The widening of the C21—C22—C23 and C21—C30—C29 bond angles [123.2 (2)° and 121.9 (2)°, respectively] are due to the short contacts H3···H23 (2 Å) and H4B···H30 (2.1 Å).
Pyrrolidine ring is in an envelope conformation, with puckering parameters q2 = 0.420 (2) Å and ϕ = 171.9 (3) °, and with atom C4 deviating -0.587 (2) Å from the least-squares plane passing through the remaining four atoms (N1/C1-C3) of that ring (Cremer & Pople, 1975). The cyclohexanone ring in the tetrahydro naphthalin ring system has a half-chair conformation with the lowest asymmetry parameters of ΔC2(C12-C13) = 0.093 (1)° (Nardelli, 1983). The mean plane of oxindole ring system make a dihedral angles of 44.0 (1) and 82.7 (1)°, respectively with respect to the naphtyl group systems and benzyl ring. The benzyl ring is oriented at an angle of 67.1 (1)° with respect to the naphthyl ring system.
The molecular structure is influenced by four intramolecular C—H···O close contacts and C—H···π interaction. Atoms O1 and O2 act as a bifurcated acceptor for these four C—H···O intramolecular close contacts. In the molecular packing, C—H···O hydrogen bonds involving atoms C26 and O1 link symmetry-related molecules to form C(12) chain motif in the unit cell. (Fig. 3 and Table 1).