organic compounds
2-[(E)-(2,4-Dichlorobenzylidene)amino]isoindoline-1,3-dione
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C15H8Cl2N2O2, the molecule adopts an E configuration about the central C=N double bond. The isoindoline ring is essentially planar, with a maximum deviation of 0.019 (2) Å. The dihedral angle between the isoindoline ring and the dichloro-substituted benzene ring is 6.54 (9)°. An intramolecular C—H⋯O hydrogen bond occurs. A short Cl⋯Cl contact of 3.4027 (9) Å is present in the The crystal packing is further stabilized by weak C—H⋯π interactions.
Related literature
For the coordination ability and biological activity of et al. (2011); Gupta & Sutar (2008); Sridhar et al., (2001); Mladenova et al. (2002); Bharti et al. (2010); Tenorio et al. (2005); Liu et al. (1992); Hodnett & Dunn (1970).
see: BhunoraExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811023063/rz2609sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811023063/rz2609Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811023063/rz2609Isup3.cml
A mixture of 2-amino-1,3-isoindolinedione (6.15 mmol, 1.0 g) and 2,4-dichloro benzaldehyde (6.15 mmol, 1.08 g) was dissolved in an appropriate amount of ethanol-glacial acetic acid (2:1 v/v). The mixture was refluxed on water-bath for 0.5 hr to give a white colour precipitate. The solution was cooled at room temperature, filtered off, washed with ethanol and dried. The isolated product was recrystallized from chloroform-methanol (1:1 v/v)to get the new Schiff base in 80% yield.
All hydrogen atoms were positioned geometrically [C–H = 0.93 Å] and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C15H8Cl2N2O2 | F(000) = 648 |
Mr = 319.13 | Dx = 1.572 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4526 reflections |
a = 8.0387 (8) Å | θ = 2.8–29.8° |
b = 7.6981 (8) Å | µ = 0.49 mm−1 |
c = 22.2686 (19) Å | T = 296 K |
β = 101.828 (3)° | Block, colourless |
V = 1348.8 (2) Å3 | 0.44 × 0.19 × 0.15 mm |
Z = 4 |
Bruker APEXII DUO CCD area-detector diffractometer | 3902 independent reflections |
Radiation source: fine-focus sealed tube | 2795 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ϕ and ω scans | θmax = 30.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −10→11 |
Tmin = 0.815, Tmax = 0.930 | k = −10→10 |
13900 measured reflections | l = −31→29 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.113 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0331P)2 + 0.9203P] where P = (Fo2 + 2Fc2)/3 |
3902 reflections | (Δ/σ)max = 0.001 |
190 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
C15H8Cl2N2O2 | V = 1348.8 (2) Å3 |
Mr = 319.13 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.0387 (8) Å | µ = 0.49 mm−1 |
b = 7.6981 (8) Å | T = 296 K |
c = 22.2686 (19) Å | 0.44 × 0.19 × 0.15 mm |
β = 101.828 (3)° |
Bruker APEXII DUO CCD area-detector diffractometer | 3902 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2795 reflections with I > 2σ(I) |
Tmin = 0.815, Tmax = 0.930 | Rint = 0.033 |
13900 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.113 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.30 e Å−3 |
3902 reflections | Δρmin = −0.42 e Å−3 |
190 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.72877 (6) | −0.18254 (8) | 0.79982 (3) | 0.05067 (17) | |
Cl2 | 1.31606 (7) | −0.18842 (9) | 0.72366 (3) | 0.05889 (19) | |
O1 | 0.58896 (19) | 0.1209 (2) | 0.93934 (8) | 0.0566 (5) | |
O2 | 1.08478 (17) | 0.3584 (2) | 1.04839 (7) | 0.0457 (4) | |
N1 | 0.9657 (2) | 0.1599 (2) | 0.94538 (8) | 0.0374 (4) | |
N2 | 0.86224 (19) | 0.2180 (2) | 0.98379 (7) | 0.0347 (4) | |
C1 | 0.9387 (2) | −0.1149 (3) | 0.81141 (9) | 0.0337 (4) | |
C2 | 1.0327 (2) | −0.1710 (3) | 0.76903 (9) | 0.0366 (4) | |
H2A | 0.9837 | −0.2409 | 0.7361 | 0.044* | |
C3 | 1.2005 (2) | −0.1199 (3) | 0.77727 (9) | 0.0369 (4) | |
C4 | 1.2766 (2) | −0.0181 (3) | 0.82651 (9) | 0.0387 (4) | |
H4A | 1.3906 | 0.0127 | 0.8319 | 0.046* | |
C5 | 1.1798 (2) | 0.0371 (3) | 0.86757 (9) | 0.0367 (4) | |
H5A | 1.2299 | 0.1064 | 0.9005 | 0.044* | |
C6 | 1.0085 (2) | −0.0087 (3) | 0.86084 (8) | 0.0330 (4) | |
C7 | 0.9041 (2) | 0.0526 (3) | 0.90345 (9) | 0.0378 (4) | |
H7A | 0.7932 | 0.0130 | 0.8997 | 0.045* | |
C8 | 0.6843 (2) | 0.2004 (3) | 0.97890 (9) | 0.0366 (4) | |
C9 | 0.6452 (2) | 0.3000 (3) | 1.03100 (9) | 0.0339 (4) | |
C10 | 0.4911 (3) | 0.3240 (3) | 1.04859 (10) | 0.0413 (5) | |
H10A | 0.3918 | 0.2728 | 1.0271 | 0.050* | |
C11 | 0.4911 (3) | 0.4273 (3) | 1.09946 (10) | 0.0449 (5) | |
H11A | 0.3897 | 0.4458 | 1.1125 | 0.054* | |
C12 | 0.6395 (3) | 0.5040 (3) | 1.13147 (10) | 0.0491 (5) | |
H12A | 0.6356 | 0.5733 | 1.1654 | 0.059* | |
C13 | 0.7941 (3) | 0.4787 (3) | 1.11370 (9) | 0.0436 (5) | |
H13A | 0.8937 | 0.5295 | 1.1351 | 0.052* | |
C14 | 0.7933 (2) | 0.3755 (3) | 1.06312 (9) | 0.0336 (4) | |
C15 | 0.9360 (2) | 0.3247 (3) | 1.03399 (9) | 0.0338 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0330 (2) | 0.0650 (4) | 0.0558 (3) | −0.0135 (2) | 0.0131 (2) | −0.0105 (3) |
Cl2 | 0.0444 (3) | 0.0766 (5) | 0.0621 (4) | −0.0071 (3) | 0.0259 (3) | −0.0224 (3) |
O1 | 0.0355 (8) | 0.0710 (12) | 0.0616 (10) | −0.0063 (8) | 0.0057 (7) | −0.0274 (9) |
O2 | 0.0290 (7) | 0.0587 (10) | 0.0490 (9) | −0.0036 (7) | 0.0069 (6) | −0.0061 (7) |
N1 | 0.0326 (8) | 0.0425 (10) | 0.0388 (9) | 0.0032 (7) | 0.0114 (7) | −0.0030 (7) |
N2 | 0.0294 (7) | 0.0386 (9) | 0.0368 (8) | 0.0007 (7) | 0.0082 (6) | −0.0035 (7) |
C1 | 0.0275 (8) | 0.0357 (10) | 0.0377 (10) | −0.0017 (7) | 0.0060 (7) | 0.0023 (8) |
C2 | 0.0338 (9) | 0.0388 (11) | 0.0370 (10) | −0.0015 (8) | 0.0066 (8) | −0.0031 (9) |
C3 | 0.0322 (9) | 0.0411 (11) | 0.0394 (10) | 0.0022 (8) | 0.0123 (8) | −0.0018 (9) |
C4 | 0.0279 (9) | 0.0432 (12) | 0.0446 (11) | −0.0031 (8) | 0.0068 (8) | −0.0020 (9) |
C5 | 0.0336 (9) | 0.0387 (11) | 0.0364 (10) | −0.0007 (8) | 0.0036 (7) | −0.0033 (8) |
C6 | 0.0319 (9) | 0.0342 (10) | 0.0331 (9) | 0.0018 (8) | 0.0071 (7) | 0.0024 (8) |
C7 | 0.0329 (9) | 0.0434 (12) | 0.0383 (10) | 0.0007 (8) | 0.0101 (8) | −0.0014 (9) |
C8 | 0.0293 (9) | 0.0395 (11) | 0.0408 (10) | 0.0015 (8) | 0.0065 (8) | −0.0010 (9) |
C9 | 0.0301 (9) | 0.0350 (11) | 0.0373 (10) | 0.0013 (8) | 0.0082 (7) | 0.0027 (8) |
C10 | 0.0322 (9) | 0.0433 (12) | 0.0499 (12) | −0.0011 (9) | 0.0116 (8) | 0.0036 (10) |
C11 | 0.0407 (11) | 0.0473 (13) | 0.0517 (12) | 0.0051 (9) | 0.0216 (9) | 0.0036 (10) |
C12 | 0.0541 (13) | 0.0529 (14) | 0.0445 (12) | 0.0032 (11) | 0.0198 (10) | −0.0054 (10) |
C13 | 0.0411 (11) | 0.0498 (13) | 0.0401 (11) | −0.0012 (10) | 0.0084 (8) | −0.0066 (10) |
C14 | 0.0309 (9) | 0.0348 (10) | 0.0354 (9) | 0.0017 (8) | 0.0077 (7) | 0.0029 (8) |
C15 | 0.0295 (8) | 0.0372 (11) | 0.0348 (9) | −0.0003 (8) | 0.0071 (7) | 0.0015 (8) |
Cl1—C1 | 1.7338 (19) | C5—H5A | 0.9300 |
Cl2—C3 | 1.7383 (19) | C6—C7 | 1.467 (3) |
O1—C8 | 1.209 (2) | C7—H7A | 0.9300 |
O2—C15 | 1.201 (2) | C8—C9 | 1.477 (3) |
N1—C7 | 1.268 (3) | C9—C14 | 1.385 (3) |
N1—N2 | 1.384 (2) | C9—C10 | 1.386 (3) |
N2—C15 | 1.416 (3) | C10—C11 | 1.384 (3) |
N2—C8 | 1.419 (2) | C10—H10A | 0.9300 |
C1—C2 | 1.393 (3) | C11—C12 | 1.390 (3) |
C1—C6 | 1.393 (3) | C11—H11A | 0.9300 |
C2—C3 | 1.381 (3) | C12—C13 | 1.393 (3) |
C2—H2A | 0.9300 | C12—H12A | 0.9300 |
C3—C4 | 1.384 (3) | C13—C14 | 1.377 (3) |
C4—C5 | 1.384 (3) | C13—H13A | 0.9300 |
C4—H4A | 0.9300 | C14—C15 | 1.482 (3) |
C5—C6 | 1.399 (3) | ||
C7—N1—N2 | 118.18 (16) | O1—C8—N2 | 125.65 (18) |
N1—N2—C15 | 117.91 (15) | O1—C8—C9 | 129.07 (18) |
N1—N2—C8 | 130.24 (16) | N2—C8—C9 | 105.28 (16) |
C15—N2—C8 | 111.63 (15) | C14—C9—C10 | 121.44 (19) |
C2—C1—C6 | 122.02 (17) | C14—C9—C8 | 108.96 (16) |
C2—C1—Cl1 | 116.91 (15) | C10—C9—C8 | 129.59 (19) |
C6—C1—Cl1 | 121.07 (15) | C11—C10—C9 | 117.2 (2) |
C3—C2—C1 | 118.21 (18) | C11—C10—H10A | 121.4 |
C3—C2—H2A | 120.9 | C9—C10—H10A | 121.4 |
C1—C2—H2A | 120.9 | C10—C11—C12 | 121.30 (19) |
C2—C3—C4 | 121.86 (18) | C10—C11—H11A | 119.3 |
C2—C3—Cl2 | 117.88 (16) | C12—C11—H11A | 119.3 |
C4—C3—Cl2 | 120.26 (15) | C11—C12—C13 | 121.2 (2) |
C5—C4—C3 | 118.67 (18) | C11—C12—H12A | 119.4 |
C5—C4—H4A | 120.7 | C13—C12—H12A | 119.4 |
C3—C4—H4A | 120.7 | C14—C13—C12 | 117.3 (2) |
C4—C5—C6 | 121.77 (18) | C14—C13—H13A | 121.4 |
C4—C5—H5A | 119.1 | C12—C13—H13A | 121.4 |
C6—C5—H5A | 119.1 | C13—C14—C9 | 121.60 (18) |
C1—C6—C5 | 117.44 (17) | C13—C14—C15 | 129.51 (18) |
C1—C6—C7 | 120.55 (17) | C9—C14—C15 | 108.90 (17) |
C5—C6—C7 | 122.01 (18) | O2—C15—N2 | 124.69 (17) |
N1—C7—C6 | 119.80 (18) | O2—C15—C14 | 130.08 (19) |
N1—C7—H7A | 120.1 | N2—C15—C14 | 105.21 (15) |
C6—C7—H7A | 120.1 | ||
C7—N1—N2—C15 | 174.19 (18) | N2—C8—C9—C14 | 1.7 (2) |
C7—N1—N2—C8 | −11.8 (3) | O1—C8—C9—C10 | 1.8 (4) |
C6—C1—C2—C3 | 0.6 (3) | N2—C8—C9—C10 | −178.9 (2) |
Cl1—C1—C2—C3 | −179.66 (16) | C14—C9—C10—C11 | 0.3 (3) |
C1—C2—C3—C4 | 1.0 (3) | C8—C9—C10—C11 | −179.0 (2) |
C1—C2—C3—Cl2 | −179.27 (16) | C9—C10—C11—C12 | 0.1 (3) |
C2—C3—C4—C5 | −1.6 (3) | C10—C11—C12—C13 | −0.4 (4) |
Cl2—C3—C4—C5 | 178.68 (17) | C11—C12—C13—C14 | 0.2 (4) |
C3—C4—C5—C6 | 0.6 (3) | C12—C13—C14—C9 | 0.2 (3) |
C2—C1—C6—C5 | −1.5 (3) | C12—C13—C14—C15 | −179.5 (2) |
Cl1—C1—C6—C5 | 178.73 (15) | C10—C9—C14—C13 | −0.5 (3) |
C2—C1—C6—C7 | 177.96 (19) | C8—C9—C14—C13 | 178.99 (19) |
Cl1—C1—C6—C7 | −1.8 (3) | C10—C9—C14—C15 | 179.29 (19) |
C4—C5—C6—C1 | 0.9 (3) | C8—C9—C14—C15 | −1.3 (2) |
C4—C5—C6—C7 | −178.58 (19) | N1—N2—C15—O2 | −5.7 (3) |
N2—N1—C7—C6 | 178.49 (17) | C8—N2—C15—O2 | 179.2 (2) |
C1—C6—C7—N1 | −174.55 (19) | N1—N2—C15—C14 | 175.94 (16) |
C5—C6—C7—N1 | 4.9 (3) | C8—N2—C15—C14 | 0.8 (2) |
N1—N2—C8—O1 | 3.4 (4) | C13—C14—C15—O2 | 1.8 (4) |
C15—N2—C8—O1 | 177.8 (2) | C9—C14—C15—O2 | −177.9 (2) |
N1—N2—C8—C9 | −175.91 (19) | C13—C14—C15—N2 | −180.0 (2) |
C15—N2—C8—C9 | −1.6 (2) | C9—C14—C15—N2 | 0.3 (2) |
O1—C8—C9—C14 | −177.6 (2) |
Cg1 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···O1 | 0.93 | 2.18 | 2.857 (2) | 129 |
C2—H2A···Cg1i | 0.93 | 2.81 | 3.663 (2) | 153 |
Symmetry code: (i) −x+2, y−1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C15H8Cl2N2O2 |
Mr | 319.13 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 8.0387 (8), 7.6981 (8), 22.2686 (19) |
β (°) | 101.828 (3) |
V (Å3) | 1348.8 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.49 |
Crystal size (mm) | 0.44 × 0.19 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.815, 0.930 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13900, 3902, 2795 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.704 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.113, 1.07 |
No. of reflections | 3902 |
No. of parameters | 190 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.42 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···O1 | 0.93 | 2.18 | 2.857 (2) | 129 |
C2—H2A···Cg1i | 0.93 | 2.81 | 3.663 (2) | 153 |
Symmetry code: (i) −x+2, y−1/2, −z+3/2. |
Acknowledgements
MA, CWO and HO thank Universiti Sains Malaysia (USM) for providing the necessary research facilities and RU research funding under grant No. 1001/PKIMIA/811134. MA also thanks USM for the award of a post-doctoral fellowship. HKF and MH thank the Malaysian Government and USM for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
References
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Schiff bases have been prepared from the condensation of aldehydes or ketones with amines and their coordination ability with metal ions such as copper (II), cobalt (II), iron (II) and zinc (II) (Bhunora et al., 2011; Gupta & Sutar, 2008) has been studied. Many Schiff bases have been reported to possess antibacterial (Sridhar et al.,, 2001; Mladenova et al., 2002); antifungal (Bharti et al., 2010; Tenorio et al., 2005); and antitumor activities (Liu et al., 1992; Hodnett & Dunn, 1970).
In the title compound (Fig. 1), the molecule adopts an E configuration about the central C7═N1 double bond. The isoindoline ring is essentially planar, with a maximum deviation of 0.019 (2) Å for atom C8. The dihedral angle between the isoindoline ring and the dichloro-substituted phenyl ring is 6.54 (9)°. An intramolecular C—H···O hydrogen bond which generates an S(6) ring motif and a short Cl···Cl contact of 3.4027 (9) Å are present in the crystal structure. The crystal packing (Fig. 2) is further stabilized by a weak C—H···π (Table 1) interactions involving the C1–C6 ring.