metal-organic compounds
Sodium piperidine-1-carbodithioate dihydrate
aInstituto de Química de São Carlos, Universidade de São Paulo, Av. Trabalhador Sãocarlense 400, Caixa Postal 780, 13560-970, São Carlos, SP, Brazil
*Correspondence e-mail: mafud@iqsc.usp.br
The +·C6H10NS2−·2H2O, is composed of a sodium cation, a piperidinedithiocarbamate anion which exhibits positional disorder, and two lattice water molecules. The atoms of the piperidine ring are divided over two sites with occupancy factors of 0.554 (6) and 0.446 (6). In the crystal, the sodium cation (coordination number of 6) and the piperidinedithiocarbamate anion are linked, forming an infinite two-dimensional network extending parallel to (001). O—H⋯S hydrogen bonds, involving the lattice water molecules, also aid in stabilizing the crystal sructure.
of the title compound, NaRelated literature
For the crystal structures of similar compounds, see: Oskarsson et al. (1979); Albertsson et al. (1980); Ymén (1982); Mafud & Gambardella (2011). For puckering parameters, see: Cremer & Pople (1975).
Experimental
Crystal data
|
Data collection
|
Refinement
|
Data collection: COLLECT (Nonius, 1998); cell SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997) and SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811022604/su2283sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811022604/su2283Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811022604/su2283Isup3.cml
The title compound was prepared by slow addition of 0.1 mol of CS2 to a cold solution containing 0.2 mol of piperidine and a stoichiometric amount of sodium hydroxide in ethanol/water 1:1 (v/v). The reaction mixture was placed in the freezer for 12 h and then filtered through a Büchner funnel, washed with cold ether and the product recrystallized in an ethanol water mixture 1:1 (v/v). Colourless single crystals, suitable for X-ray
were obtained. On heating they sublimed and decomposed.The H-atom positions of the water molecules were located in a difference Fourier map, they were refined with distance restraints, O-H = 0.84 (2) Å, with Uiso(H) = 1.5Ueq(parent O-atom). The C-bound H-atoms of the anion were included in calculated positions and treated as riding atoms: C—H = 0.97 Å, with Uiso(H) = 1.2Ueq(parent C-atom).
Data collection: COLLECT (Nonius, 1998); cell
SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).Na+·C6H10NS2−·2H2O | F(000) = 464 |
Mr = 219.29 | Dx = 1.377 Mg m−3 |
Monoclinic, P21/a | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yab | Cell parameters from 24030 reflections |
a = 12.241 (5) Å | θ = 2.9–26.7° |
b = 5.909 (5) Å | µ = 0.51 mm−1 |
c = 14.690 (5) Å | T = 290 K |
β = 95.519 (5)° | Prism, colourless |
V = 1057.6 (11) Å3 | 0.02 × 0.02 × 0.02 mm |
Z = 4 |
Nonius KappaCCD diffractometer | 1482 reflections with I > 2σ(I) |
Radiation source: Enraf Nonius FR590 | Rint = 0.145 |
Graphite monochromator | θmax = 25.1°, θmin = 3.3° |
Detector resolution: 9 pixels mm-1 | h = −14→14 |
CCD rotation images, thick slices scans | k = −7→6 |
7553 measured reflections | l = −17→16 |
1863 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.152 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0964P)2] where P = (Fo2 + 2Fc2)/3 |
1863 reflections | (Δ/σ)max < 0.001 |
176 parameters | Δρmax = 0.33 e Å−3 |
6 restraints | Δρmin = −0.36 e Å−3 |
Na+·C6H10NS2−·2H2O | V = 1057.6 (11) Å3 |
Mr = 219.29 | Z = 4 |
Monoclinic, P21/a | Mo Kα radiation |
a = 12.241 (5) Å | µ = 0.51 mm−1 |
b = 5.909 (5) Å | T = 290 K |
c = 14.690 (5) Å | 0.02 × 0.02 × 0.02 mm |
β = 95.519 (5)° |
Nonius KappaCCD diffractometer | 1482 reflections with I > 2σ(I) |
7553 measured reflections | Rint = 0.145 |
1863 independent reflections |
R[F2 > 2σ(F2)] = 0.054 | 6 restraints |
wR(F2) = 0.152 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.33 e Å−3 |
1863 reflections | Δρmin = −0.36 e Å−3 |
176 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.74854 (5) | 0.03097 (13) | 0.39216 (4) | 0.0481 (3) | |
S2 | 0.86593 (6) | 0.24242 (13) | 0.24400 (5) | 0.0577 (3) | |
Na1 | 0.57813 (8) | −0.24210 (16) | 0.48568 (8) | 0.0509 (4) | |
O1 | 0.41274 (14) | −0.0826 (4) | 0.41396 (13) | 0.0542 (5) | |
H11O | 0.403 (3) | −0.012 (5) | 0.3644 (17) | 0.081* | |
H12O | 0.369 (2) | −0.194 (4) | 0.418 (2) | 0.081* | |
O2 | 0.55132 (14) | −0.5918 (4) | 0.40928 (13) | 0.0533 (5) | |
H21O | 0.509 (2) | −0.604 (6) | 0.3618 (16) | 0.08* | |
H22O | 0.604 (2) | −0.687 (5) | 0.409 (2) | 0.08* | |
C1 | 0.7694 (2) | 0.0599 (5) | 0.27824 (18) | 0.0551 (7) | |
N1 | 0.6797 (6) | 0.0084 (12) | 0.2149 (4) | 0.0541 (16) | 0.446 (6) |
C2 | 0.6746 (8) | 0.0673 (16) | 0.1177 (5) | 0.081 (3) | 0.446 (6) |
H2A | 0.73 | 0.1807 | 0.1092 | 0.097* | 0.446 (6) |
H2B | 0.6034 | 0.1336 | 0.0991 | 0.097* | 0.446 (6) |
C3 | 0.6917 (19) | −0.128 (5) | 0.0585 (18) | 0.095 (8) | 0.446 (6) |
H3A | 0.7657 | −0.1862 | 0.0716 | 0.114* | 0.446 (6) |
H3B | 0.6818 | −0.0832 | −0.0053 | 0.114* | 0.446 (6) |
C4 | 0.6069 (10) | −0.314 (3) | 0.0773 (10) | 0.079 (4) | 0.446 (6) |
H4A | 0.5339 | −0.2616 | 0.0555 | 0.095* | 0.446 (6) |
H4B | 0.6218 | −0.449 | 0.043 | 0.095* | 0.446 (6) |
C5 | 0.6089 (7) | −0.3753 (16) | 0.1787 (6) | 0.076 (2) | 0.446 (6) |
H5A | 0.5505 | −0.4818 | 0.1877 | 0.091* | 0.446 (6) |
H5B | 0.6784 | −0.4451 | 0.1998 | 0.091* | 0.446 (6) |
C6 | 0.5931 (7) | −0.1592 (18) | 0.2320 (6) | 0.067 (2) | 0.446 (6) |
H6A | 0.5213 | −0.0958 | 0.2135 | 0.08* | 0.446 (6) |
H6B | 0.5969 | −0.1932 | 0.2969 | 0.08* | 0.446 (6) |
N1' | 0.7338 (4) | −0.1085 (10) | 0.2187 (3) | 0.0516 (13) | 0.554 (6) |
C2' | 0.7582 (5) | −0.1213 (13) | 0.1240 (4) | 0.0677 (19) | 0.554 (6) |
H2'1 | 0.7906 | −0.267 | 0.1125 | 0.081* | 0.554 (6) |
H2'2 | 0.8103 | −0.0042 | 0.1119 | 0.081* | 0.554 (6) |
C3' | 0.6545 (14) | −0.091 (5) | 0.0626 (11) | 0.095 (6) | 0.554 (6) |
H3'1 | 0.6717 | −0.1086 | −0.0002 | 0.115* | 0.554 (6) |
H3'2 | 0.6291 | 0.0629 | 0.0693 | 0.115* | 0.554 (6) |
C4' | 0.5616 (9) | −0.249 (3) | 0.0778 (10) | 0.111 (5) | 0.554 (6) |
H4'1 | 0.5798 | −0.4026 | 0.0616 | 0.133* | 0.554 (6) |
H4'2 | 0.4954 | −0.2037 | 0.0407 | 0.133* | 0.554 (6) |
C5' | 0.5447 (6) | −0.2350 (14) | 0.1783 (6) | 0.082 (2) | 0.554 (6) |
H5'1 | 0.5157 | −0.0869 | 0.1912 | 0.098* | 0.554 (6) |
H5'2 | 0.4909 | −0.3471 | 0.1922 | 0.098* | 0.554 (6) |
C6' | 0.6494 (6) | −0.2736 (13) | 0.2392 (4) | 0.0629 (18) | 0.554 (6) |
H6'1 | 0.6349 | −0.2592 | 0.3027 | 0.075* | 0.554 (6) |
H6'2 | 0.6759 | −0.4258 | 0.2299 | 0.075* | 0.554 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0420 (4) | 0.0551 (5) | 0.0476 (4) | 0.0008 (3) | 0.0057 (3) | −0.0027 (3) |
S2 | 0.0586 (5) | 0.0585 (6) | 0.0565 (5) | −0.0121 (3) | 0.0090 (3) | 0.0002 (3) |
Na1 | 0.0465 (6) | 0.0453 (8) | 0.0609 (7) | 0.0002 (4) | 0.0053 (5) | −0.0005 (5) |
O1 | 0.0534 (11) | 0.0470 (13) | 0.0608 (12) | −0.0039 (9) | −0.0015 (9) | 0.0059 (10) |
O2 | 0.0502 (10) | 0.0497 (13) | 0.0597 (12) | 0.0060 (9) | 0.0033 (8) | −0.0031 (10) |
C1 | 0.0574 (15) | 0.056 (2) | 0.0512 (15) | −0.0111 (13) | 0.0027 (12) | −0.0035 (14) |
N1 | 0.062 (4) | 0.052 (4) | 0.047 (3) | −0.008 (3) | −0.001 (3) | 0.000 (2) |
C2 | 0.108 (6) | 0.080 (7) | 0.051 (4) | −0.026 (5) | −0.008 (4) | 0.007 (4) |
C3 | 0.104 (14) | 0.107 (13) | 0.079 (10) | −0.051 (11) | 0.044 (10) | −0.030 (8) |
C4 | 0.077 (8) | 0.090 (9) | 0.070 (6) | −0.033 (7) | 0.003 (6) | −0.028 (7) |
C5 | 0.070 (5) | 0.070 (6) | 0.088 (6) | −0.017 (5) | 0.014 (4) | 0.000 (5) |
C6 | 0.053 (4) | 0.086 (7) | 0.061 (4) | −0.022 (5) | 0.010 (4) | −0.010 (5) |
N1' | 0.052 (3) | 0.056 (3) | 0.047 (2) | −0.011 (2) | 0.0082 (18) | −0.007 (2) |
C2' | 0.071 (4) | 0.084 (5) | 0.050 (3) | −0.020 (3) | 0.016 (3) | −0.018 (3) |
C3' | 0.105 (12) | 0.130 (13) | 0.049 (6) | −0.041 (9) | −0.004 (7) | 0.016 (7) |
C4' | 0.082 (8) | 0.148 (14) | 0.096 (7) | −0.042 (7) | −0.030 (6) | 0.037 (7) |
C5' | 0.061 (4) | 0.077 (6) | 0.107 (6) | −0.020 (4) | 0.007 (4) | −0.002 (4) |
C6' | 0.066 (4) | 0.060 (5) | 0.061 (4) | −0.027 (3) | 0.000 (3) | −0.009 (3) |
S1—C1 | 1.726 (3) | C3—H3A | 0.97 |
S1—Na1i | 2.9644 (15) | C3—H3B | 0.97 |
S1—Na1 | 3.0649 (15) | C4—C5 | 1.530 (18) |
S2—C1 | 1.710 (3) | C4—H4A | 0.97 |
Na1—O2 | 2.360 (3) | C4—H4B | 0.97 |
Na1—O1 | 2.385 (2) | C5—C6 | 1.521 (14) |
Na1—O1ii | 2.416 (3) | C5—H5A | 0.97 |
Na1—O2iii | 2.515 (2) | C5—H5B | 0.97 |
Na1—S1iv | 2.9644 (15) | C6—H6A | 0.97 |
Na1—Na1ii | 3.490 (3) | C6—H6B | 0.97 |
Na1—Na1iii | 3.644 (3) | N1'—C2' | 1.452 (6) |
Na1—H12O | 2.67 (3) | N1'—C6' | 1.473 (7) |
O1—Na1ii | 2.416 (3) | C2'—C3' | 1.495 (19) |
O1—H11O | 0.839 (17) | C2'—H2'1 | 0.97 |
O1—H12O | 0.852 (17) | C2'—H2'2 | 0.97 |
O2—Na1iii | 2.515 (2) | C3'—C4' | 1.50 (3) |
O2—H21O | 0.834 (17) | C3'—H3'1 | 0.97 |
O2—H22O | 0.856 (17) | C3'—H3'2 | 0.97 |
C1—N1' | 1.368 (5) | C4'—C5' | 1.512 (17) |
C1—N1 | 1.403 (6) | C4'—H4'1 | 0.97 |
N1—C2 | 1.465 (9) | C4'—H4'2 | 0.97 |
N1—C6 | 1.489 (10) | C5'—C6' | 1.507 (11) |
C2—C3 | 1.47 (3) | C5'—H5'1 | 0.97 |
C2—H2A | 0.97 | C5'—H5'2 | 0.97 |
C2—H2B | 0.97 | C6'—H6'1 | 0.97 |
C3—C4 | 1.55 (3) | C6'—H6'2 | 0.97 |
C1—S1—Na1i | 112.20 (10) | C3—C2—H2A | 108.9 |
C1—S1—Na1 | 131.13 (10) | N1—C2—H2B | 108.9 |
Na1i—S1—Na1 | 116.43 (4) | C3—C2—H2B | 108.9 |
O2—Na1—O1 | 93.59 (8) | H2A—C2—H2B | 107.8 |
O2—Na1—O1ii | 169.15 (8) | C2—C3—C4 | 108.3 (14) |
O1—Na1—O1ii | 86.75 (8) | C2—C3—H3A | 110 |
O2—Na1—O2iii | 83.29 (8) | C4—C3—H3A | 110 |
O1—Na1—O2iii | 82.36 (7) | C2—C3—H3B | 110 |
O1ii—Na1—O2iii | 86.01 (8) | C4—C3—H3B | 110 |
O2—Na1—S1iv | 87.16 (7) | H3A—C3—H3B | 108.4 |
O1—Na1—S1iv | 166.91 (6) | C5—C4—C3 | 113.1 (13) |
O1ii—Na1—S1iv | 90.09 (7) | C5—C4—H4A | 109 |
O2iii—Na1—S1iv | 84.76 (6) | C3—C4—H4A | 109 |
O2—Na1—S1 | 108.51 (7) | C5—C4—H4B | 109 |
O1—Na1—S1 | 100.34 (7) | C3—C4—H4B | 109 |
O1ii—Na1—S1 | 82.06 (7) | H4A—C4—H4B | 107.8 |
O2iii—Na1—S1 | 167.57 (6) | C6—C5—C4 | 108.2 (9) |
S1iv—Na1—S1 | 91.78 (4) | C6—C5—H5A | 110.1 |
O2—Na1—Na1ii | 136.28 (8) | C4—C5—H5A | 110.1 |
O1—Na1—Na1ii | 43.73 (6) | C6—C5—H5B | 110.1 |
O1ii—Na1—Na1ii | 43.02 (5) | C4—C5—H5B | 110.1 |
O2iii—Na1—Na1ii | 82.00 (7) | H5A—C5—H5B | 108.4 |
S1iv—Na1—Na1ii | 131.81 (6) | N1—C6—C5 | 110.1 (6) |
S1—Na1—Na1ii | 91.55 (6) | N1—C6—H6A | 109.6 |
O2—Na1—Na1iii | 43.27 (6) | C5—C6—H6A | 109.6 |
O1—Na1—Na1iii | 87.06 (7) | N1—C6—H6B | 109.6 |
O1ii—Na1—Na1iii | 126.00 (8) | C5—C6—H6B | 109.6 |
O2iii—Na1—Na1iii | 40.02 (5) | H6A—C6—H6B | 108.2 |
S1iv—Na1—Na1iii | 84.54 (5) | C1—N1'—C2' | 124.6 (4) |
S1—Na1—Na1iii | 151.58 (5) | C1—N1'—C6' | 122.6 (4) |
Na1ii—Na1—Na1iii | 111.83 (7) | C2'—N1'—C6' | 111.9 (5) |
O2—Na1—H12O | 80.3 (6) | N1'—C2'—C3' | 109.4 (7) |
O1—Na1—H12O | 18.4 (4) | N1'—C2'—H2'1 | 109.8 |
O1ii—Na1—H12O | 97.4 (7) | C3'—C2'—H2'1 | 109.8 |
O2iii—Na1—H12O | 68.4 (5) | N1'—C2'—H2'2 | 109.8 |
S1iv—Na1—H12O | 151.4 (5) | C3'—C2'—H2'2 | 109.8 |
S1—Na1—H12O | 116.5 (5) | H2'1—C2'—H2'2 | 108.2 |
Na1ii—Na1—H12O | 56.0 (6) | C2'—C3'—C4' | 116.5 (14) |
Na1iii—Na1—H12O | 68.7 (4) | C2'—C3'—H3'1 | 108.2 |
Na1—O1—Na1ii | 93.25 (8) | C4'—C3'—H3'1 | 108.2 |
Na1—O1—H11O | 129 (2) | C2'—C3'—H3'2 | 108.2 |
Na1ii—O1—H11O | 97 (3) | C4'—C3'—H3'2 | 108.2 |
Na1—O1—H12O | 100 (2) | H3'1—C3'—H3'2 | 107.3 |
Na1ii—O1—H12O | 124 (2) | C3'—C4'—C5' | 106.7 (11) |
H11O—O1—H12O | 114 (3) | C3'—C4'—H4'1 | 110.4 |
Na1—O2—Na1iii | 96.71 (8) | C5'—C4'—H4'1 | 110.4 |
Na1—O2—H21O | 121 (3) | C3'—C4'—H4'2 | 110.4 |
Na1iii—O2—H21O | 96 (2) | C5'—C4'—H4'2 | 110.4 |
Na1—O2—H22O | 121 (2) | H4'1—C4'—H4'2 | 108.6 |
Na1iii—O2—H22O | 106 (2) | C6'—C5'—C4' | 112.5 (7) |
H21O—O2—H22O | 111 (2) | C6'—C5'—H5'1 | 109.1 |
N1'—C1—N1 | 40.3 (3) | C4'—C5'—H5'1 | 109.1 |
N1'—C1—S2 | 117.2 (3) | C6'—C5'—H5'2 | 109.1 |
N1—C1—S2 | 117.4 (3) | C4'—C5'—H5'2 | 109.1 |
N1'—C1—S1 | 118.6 (3) | H5'1—C5'—H5'2 | 107.8 |
N1—C1—S1 | 116.2 (3) | N1'—C6'—C5' | 110.6 (5) |
S2—C1—S1 | 121.25 (16) | N1'—C6'—H6'1 | 109.5 |
C1—N1—C2 | 123.5 (5) | C5'—C6'—H6'1 | 109.5 |
C1—N1—C6 | 123.9 (6) | N1'—C6'—H6'2 | 109.5 |
C2—N1—C6 | 111.0 (6) | C5'—C6'—H6'2 | 109.5 |
N1—C2—C3 | 113.2 (13) | H6'1—C6'—H6'2 | 108.1 |
N1—C2—H2A | 108.9 | ||
C1—S1—Na1—O2 | 38.84 (16) | Na1i—S1—C1—S2 | −10.8 (2) |
Na1i—S1—Na1—O2 | −135.11 (7) | Na1—S1—C1—S2 | 175.08 (10) |
C1—S1—Na1—O1 | −58.52 (16) | N1'—C1—N1—C2 | −89.0 (9) |
Na1i—S1—Na1—O1 | 127.53 (7) | S2—C1—N1—C2 | 11.7 (9) |
C1—S1—Na1—O1ii | −143.72 (15) | S1—C1—N1—C2 | 166.8 (6) |
Na1i—S1—Na1—O1ii | 42.34 (6) | N1'—C1—N1—C6 | 75.0 (8) |
C1—S1—Na1—O2iii | −160.0 (3) | S2—C1—N1—C6 | 175.6 (6) |
Na1i—S1—Na1—O2iii | 26.0 (3) | S1—C1—N1—C6 | −29.3 (9) |
C1—S1—Na1—S1iv | 126.44 (14) | C1—N1—C2—C3 | 104.9 (12) |
Na1i—S1—Na1—S1iv | −47.50 (6) | C6—N1—C2—C3 | −60.8 (14) |
C1—S1—Na1—Na1ii | −101.64 (15) | N1—C2—C3—C4 | 55 (2) |
Na1i—S1—Na1—Na1ii | 84.41 (5) | C2—C3—C4—C5 | −53 (2) |
C1—S1—Na1—Na1iii | 44.63 (19) | C3—C4—C5—C6 | 54.8 (15) |
Na1i—S1—Na1—Na1iii | −129.32 (11) | C1—N1—C6—C5 | −105.1 (9) |
O2—Na1—O1—Na1ii | 169.13 (8) | C2—N1—C6—C5 | 60.6 (11) |
O1ii—Na1—O1—Na1ii | 0 | C4—C5—C6—N1 | −57.2 (11) |
O2iii—Na1—O1—Na1ii | 86.40 (8) | N1—C1—N1'—C2' | 90.7 (8) |
S1iv—Na1—O1—Na1ii | 76.2 (3) | S2—C1—N1'—C2' | −10.6 (7) |
S1—Na1—O1—Na1ii | −81.31 (7) | S1—C1—N1'—C2' | −171.6 (4) |
Na1iii—Na1—O1—Na1ii | 126.33 (8) | N1—C1—N1'—C6' | −77.5 (6) |
O1—Na1—O2—Na1iii | −81.86 (8) | S2—C1—N1'—C6' | −178.7 (4) |
O1ii—Na1—O2—Na1iii | 9.6 (5) | S1—C1—N1'—C6' | 20.2 (7) |
O2iii—Na1—O2—Na1iii | 0 | C1—N1'—C2'—C3' | −113.5 (12) |
S1iv—Na1—O2—Na1iii | 85.05 (6) | C6'—N1'—C2'—C3' | 55.7 (13) |
S1—Na1—O2—Na1iii | 175.98 (6) | N1'—C2'—C3'—C4' | −55 (2) |
Na1ii—Na1—O2—Na1iii | −70.99 (11) | C2'—C3'—C4'—C5' | 52.4 (19) |
Na1i—S1—C1—N1' | 149.5 (3) | C3'—C4'—C5'—C6' | −52.4 (15) |
Na1—S1—C1—N1' | −24.6 (4) | C1—N1'—C6'—C5' | 110.7 (7) |
Na1i—S1—C1—N1 | −164.9 (4) | C2'—N1'—C6'—C5' | −58.7 (9) |
Na1—S1—C1—N1 | 21.0 (5) | C4'—C5'—C6'—N1' | 57.7 (11) |
Symmetry codes: (i) −x+3/2, y+1/2, −z+1; (ii) −x+1, −y, −z+1; (iii) −x+1, −y−1, −z+1; (iv) −x+3/2, y−1/2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H11O···S2v | 0.84 (2) | 2.39 (2) | 3.214 (2) | 167 (3) |
O1—H12O···S1vi | 0.85 (2) | 2.49 (2) | 3.322 (3) | 167 (3) |
O2—H21O···S2vi | 0.83 (2) | 2.48 (2) | 3.283 (2) | 163 (3) |
O2—H22O···S1vii | 0.86 (2) | 2.46 (2) | 3.313 (2) | 174 (3) |
Symmetry codes: (v) x−1/2, −y+1/2, z; (vi) x−1/2, −y−1/2, z; (vii) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | Na+·C6H10NS2−·2H2O |
Mr | 219.29 |
Crystal system, space group | Monoclinic, P21/a |
Temperature (K) | 290 |
a, b, c (Å) | 12.241 (5), 5.909 (5), 14.690 (5) |
β (°) | 95.519 (5) |
V (Å3) | 1057.6 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.51 |
Crystal size (mm) | 0.02 × 0.02 × 0.02 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7553, 1863, 1482 |
Rint | 0.145 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.152, 1.02 |
No. of reflections | 1863 |
No. of parameters | 176 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.36 |
Computer programs: COLLECT (Nonius, 1998), DENZO and SCALEPACK (Otwinowski & Minor, 1997), SIR92 (Altomare et al., 1994), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006), WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H11O···S2i | 0.839 (17) | 2.390 (18) | 3.214 (2) | 167 (3) |
O1—H12O···S1ii | 0.852 (17) | 2.49 (2) | 3.322 (3) | 167 (3) |
O2—H21O···S2ii | 0.834 (17) | 2.48 (2) | 3.283 (2) | 163 (3) |
O2—H22O···S1iii | 0.856 (17) | 2.461 (18) | 3.313 (2) | 174 (3) |
Symmetry codes: (i) x−1/2, −y+1/2, z; (ii) x−1/2, −y−1/2, z; (iii) x, y−1, z. |
Acknowledgements
We are grateful to the Instituto de Química de São Carlos and the Universidade de São Paulo for supporting this study.
References
Albertsson, J., Oskarsson, Å., Ståhl, K., Svensson, C. & Ymén, I. (1980). Acta Cryst. B36, 3072–3078. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435. CrossRef Web of Science IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457. Web of Science CrossRef CAS IUCr Journals Google Scholar
Mafud, A. C. & Gambardella, M. T. P. (2011). Acta Cryst. E67, o879. Web of Science CSD CrossRef IUCr Journals Google Scholar
Nonius (1998). COLLECT. Nonius BV, Delft, The Netherlands. Google Scholar
Oskarsson, A., Stahl, K., Svensson, C. & Ymén, I. (1979). Eur. Cryst. Meet. 5, 67. Google Scholar
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
Ymén, I. (1982). Acta Cryst. B38, 2671–2674. CSD CrossRef Web of Science IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound is compossed of a piperidinedithiocarbamate anion, a sodium cation, and two lattice water molecules (Fig. 1). The crystal structures of similar compounds, for example sodium 1-pyrrolidinecarbodithioate dihydrate, has been reported on previously (Oskarsson et al., 1979; Albertsson et al., 1980; Ymén, 1982). The crystal structure of ammonium piperidine-1-carbodithioate dihydrate has been descibed by our group recently (Mafud & Gambardella, 2011).
The atoms of the piperidine ring are disordered, occupying two positions (A = C2',C3',C4',C5',N1' and B = C2,C3,C4,C5,N1) with occupancies of 0.554 (6)/0.446 (6). Both of these six-membered rings have a chair conformation, with puckering parameters, Q = 0.552 (13) Å, θ = 180.0 (13) °, ϕ2 = 128 (25) °, for ring A, and Q = 0.577 (15) Å, θ = 0.0 (15) °, ϕ2 = 313 (27) °, for ring B (Cremer & Pople, 1975).
The sodium atoms are coordinated to two sulfur atoms [Na1···S1 3.0649 (15) Å and Na1···S1i 2.9644 (15) Å; symmetry code: (i) -x+3/2, y-1/2, -z+1] and four oxygens [Na1···O2 2.360 (3) Å, Na1···O1 2.385 (2) Å, Na1···O1ii 2.416 (3) Å, Na1···O2iii 2.515 (2) Å; symmetry codes: (ii) -x+1, -y, -z+1; (iii) -x+1, -y-1, -z+1], with a bi-pyramidal reversed geometry. This configuration generates close packed layers which remain cohesive in crystal stacking by van der Waals interactions. The distances of these contacts are slightly less than the sum of the van der Waals radii.
In the crystal O-H···S hydrogen bonds, involving the lattice water molecules, aid in stabilizing the crystal structure (Table 1). The crystal packing gives rise to a supramolecular structure, whose infinite two-dimensional network, with base vectors: #1 = [0 1 0], #2 = [1 0 0], grows parallel to (001), as shown in Fig. 2.