metal-organic compounds
Bis(4-fluorobenzoato)-κ2O,O′;κO-(4-fluorobenzoic acid-κO)bis(nicotinamide-κN1)copper(II)
aDepartment of Chemistry, Kafkas University, 36100 Kars, Turkey, bDepartment of Physics, Karabük University, 78050 Karabük, Turkey, and cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
In the title CuII complex, [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2], the CuII cation is coordinated by two N atoms of two nicotinamide (NA) ligands, and by four O atoms from two 4-fluorobenzoate (PFB) anions and one 4-fluorobenzoic acid (PFBA) molecule, in a distorted octahedral geometry. In the molecule, two Cu—O bond lengths are significantly longer than the other two. The dihedral angles between the carboxylate groups and the adjacent benzene rings are 11.08 (14), 7.62 (13) and 5.73 (11)°, while the benzene rings are oriented at dihedral angles of 15.62 (6), 33.71 (8) and 26.60 (8)°. In the extensive N—H⋯O, C—H⋯F and C—H⋯O hydrogen bonds link the molecules into a three-dimensional network. π–π contacts between the benzene rings [centroid-to-centroid distances = 3.5517 (15), 3.8456 (14) and 3.9265 (13) Å] further stabilize the crystal structure.
Related literature
For background literature on niacin, see: Krishnamachari (1974). For information on the nicotinic acid derivative N,N-diethylnicotinamide, see: Bigoli et al. (1972). For related structures, see: Greenaway et al. (1984); Hökelek et al. (2010a,b,c,d,e); Hökelek et al. (2009a,b).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811020897/xu5224sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811020897/xu5224Isup2.hkl
The title compound was prepared by the reaction of CuSO4.5H2O (1.23 g, 5 mmol) in H2O (20 ml) and NA (1.22 g, 10 mmol) in H2O (20 ml) with sodium 4-fluorobenzoate (1.62 g, 10 mmol) in H2O (50 ml) at room temperature. The mixture was filtered and set aside to crystallize at ambient temperature for one month, giving blue single crystals.
Atoms H2A, H2B, H4A and H4B (for NH2 groups) and H41 (for OH group) were located in a difference Fourier map and were freely refined. The C-bound H atoms were positioned geometrically with C—H = 0.95 Å for aromatic H atoms, and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. The intramolecular O—H···O hydrogen bond is shown as dashed line. | |
Fig. 2. A view of the crystal packing of the title compound. Only the N—H···O hydrogen bonds are shown as dashed lines. [H atoms not involved in hydrogen bonding have been omitted for clarity]. |
[Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] | Z = 2 |
Mr = 726.12 | F(000) = 742 |
Triclinic, P1 | Dx = 1.573 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.3370 (2) Å | Cell parameters from 9894 reflections |
b = 11.6707 (3) Å | θ = 2.5–28.4° |
c = 14.1121 (4) Å | µ = 0.79 mm−1 |
α = 110.824 (4)° | T = 100 K |
β = 101.333 (3)° | Block, blue |
γ = 95.761 (2)° | 0.48 × 0.32 × 0.24 mm |
V = 1533.09 (8) Å3 |
Bruker APEXII Kappa CCD area-detector diffractometer | 7686 independent reflections |
Radiation source: fine-focus sealed tube | 6584 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
ϕ and ω scans | θmax = 28.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −13→12 |
Tmin = 0.745, Tmax = 0.827 | k = −15→15 |
27657 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.087 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0247P)2 + 1.9077P] where P = (Fo2 + 2Fc2)/3 |
7686 reflections | (Δ/σ)max < 0.001 |
461 parameters | Δρmax = 0.59 e Å−3 |
1 restraint | Δρmin = −0.53 e Å−3 |
[Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] | γ = 95.761 (2)° |
Mr = 726.12 | V = 1533.09 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.3370 (2) Å | Mo Kα radiation |
b = 11.6707 (3) Å | µ = 0.79 mm−1 |
c = 14.1121 (4) Å | T = 100 K |
α = 110.824 (4)° | 0.48 × 0.32 × 0.24 mm |
β = 101.333 (3)° |
Bruker APEXII Kappa CCD area-detector diffractometer | 7686 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 6584 reflections with I > 2σ(I) |
Tmin = 0.745, Tmax = 0.827 | Rint = 0.031 |
27657 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 1 restraint |
wR(F2) = 0.087 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.59 e Å−3 |
7686 reflections | Δρmin = −0.53 e Å−3 |
461 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.13629 (2) | 0.00940 (2) | 0.301857 (18) | 0.01112 (7) | |
O1 | 0.21519 (13) | −0.08538 (12) | 0.17898 (10) | 0.0128 (3) | |
O2 | 0.37085 (14) | 0.06815 (12) | 0.30046 (11) | 0.0147 (3) | |
O3 | −0.06751 (14) | −0.11248 (13) | 0.23335 (11) | 0.0162 (3) | |
O4 | −0.19206 (16) | −0.02059 (14) | 0.34144 (13) | 0.0243 (3) | |
H41 | −0.136 (3) | 0.048 (2) | 0.367 (3) | 0.056* | |
O5 | 0.15186 (15) | 0.14357 (13) | 0.43863 (11) | 0.0181 (3) | |
O6 | −0.05429 (16) | 0.19004 (14) | 0.42197 (13) | 0.0258 (4) | |
O7 | 0.36816 (15) | −0.47531 (13) | 0.40855 (12) | 0.0205 (3) | |
O8 | 0.08320 (16) | 0.47994 (13) | 0.11418 (12) | 0.0240 (3) | |
N1 | 0.19980 (16) | −0.10554 (14) | 0.37023 (12) | 0.0121 (3) | |
N2 | 0.49317 (18) | −0.32379 (16) | 0.55914 (14) | 0.0166 (4) | |
H2A | 0.532 (3) | −0.377 (3) | 0.572 (2) | 0.036 (8)* | |
H2B | 0.517 (3) | −0.243 (3) | 0.602 (2) | 0.037 (8)* | |
N3 | 0.09164 (16) | 0.12271 (14) | 0.22622 (13) | 0.0121 (3) | |
N4 | −0.05759 (19) | 0.33049 (17) | −0.02899 (14) | 0.0180 (4) | |
H4A | −0.094 (3) | 0.260 (3) | −0.061 (2) | 0.019 (6)* | |
H4B | −0.070 (2) | 0.380 (2) | −0.056 (2) | 0.022 (6)* | |
F1 | 0.71007 (14) | −0.12837 (14) | −0.02727 (11) | 0.0314 (3) | |
F2 | −0.56952 (14) | −0.53850 (12) | 0.11468 (12) | 0.0331 (3) | |
F3 | 0.28179 (16) | 0.69704 (12) | 0.76409 (12) | 0.0398 (4) | |
C1 | 0.33457 (19) | −0.02071 (17) | 0.21304 (15) | 0.0123 (4) | |
C2 | 0.4321 (2) | −0.05193 (17) | 0.14653 (15) | 0.0137 (4) | |
C3 | 0.4058 (2) | −0.16158 (18) | 0.05765 (16) | 0.0168 (4) | |
H3 | 0.3252 | −0.2172 | 0.0377 | 0.020* | |
C4 | 0.4999 (2) | −0.1880 (2) | −0.00125 (17) | 0.0218 (4) | |
H4 | 0.4835 | −0.2610 | −0.0607 | 0.026* | |
C5 | 0.6176 (2) | −0.1036 (2) | 0.03036 (18) | 0.0214 (4) | |
C6 | 0.6464 (2) | 0.0058 (2) | 0.11703 (18) | 0.0219 (4) | |
H6 | 0.7266 | 0.0616 | 0.1357 | 0.026* | |
C7 | 0.5526 (2) | 0.03054 (18) | 0.17561 (17) | 0.0175 (4) | |
H7 | 0.5705 | 0.1034 | 0.2353 | 0.021* | |
C8 | −0.1680 (2) | −0.11385 (18) | 0.26792 (15) | 0.0155 (4) | |
C9 | −0.2758 (2) | −0.22678 (18) | 0.22622 (16) | 0.0160 (4) | |
C10 | −0.2572 (2) | −0.33826 (19) | 0.15506 (17) | 0.0202 (4) | |
H10 | −0.1778 | −0.3417 | 0.1333 | 0.024* | |
C11 | −0.3561 (2) | −0.4443 (2) | 0.11633 (18) | 0.0243 (5) | |
H11 | −0.3441 | −0.5194 | 0.0693 | 0.029* | |
C12 | −0.4729 (2) | −0.4351 (2) | 0.14966 (18) | 0.0222 (4) | |
C13 | −0.4959 (2) | −0.3259 (2) | 0.21821 (17) | 0.0210 (4) | |
H13 | −0.5767 | −0.3224 | 0.2377 | 0.025* | |
C14 | −0.3952 (2) | −0.22134 (19) | 0.25738 (16) | 0.0178 (4) | |
H14 | −0.4077 | −0.1468 | 0.3050 | 0.021* | |
C15 | 0.0698 (2) | 0.21594 (18) | 0.46296 (16) | 0.0168 (4) | |
C16 | 0.1269 (2) | 0.34387 (18) | 0.54508 (16) | 0.0161 (4) | |
C17 | 0.0416 (2) | 0.42600 (19) | 0.57831 (17) | 0.0202 (4) | |
H17 | −0.0507 | 0.4006 | 0.5507 | 0.024* | |
C18 | 0.0935 (2) | 0.5457 (2) | 0.65259 (18) | 0.0255 (5) | |
H18 | 0.0372 | 0.6013 | 0.6757 | 0.031* | |
C19 | 0.2303 (2) | 0.57979 (19) | 0.69091 (17) | 0.0249 (5) | |
C20 | 0.3180 (2) | 0.5021 (2) | 0.65898 (17) | 0.0226 (4) | |
H20 | 0.4103 | 0.5289 | 0.6858 | 0.027* | |
C21 | 0.2647 (2) | 0.38235 (19) | 0.58543 (16) | 0.0187 (4) | |
H21 | 0.3218 | 0.3274 | 0.5630 | 0.022* | |
C22 | 0.2985 (2) | −0.06282 (17) | 0.45817 (15) | 0.0139 (4) | |
H22 | 0.3234 | 0.0229 | 0.4955 | 0.017* | |
C23 | 0.3654 (2) | −0.14142 (17) | 0.49619 (15) | 0.0147 (4) | |
H23 | 0.4332 | −0.1088 | 0.5579 | 0.018* | |
C24 | 0.32900 (19) | −0.26950 (17) | 0.44009 (15) | 0.0123 (4) | |
C25 | 0.2243 (2) | −0.31342 (17) | 0.35045 (15) | 0.0147 (4) | |
H25 | 0.1963 | −0.3987 | 0.3123 | 0.018* | |
C26 | 0.1621 (2) | −0.22944 (17) | 0.31836 (15) | 0.0144 (4) | |
H26 | 0.0913 | −0.2599 | 0.2586 | 0.017* | |
C27 | 0.3992 (2) | −0.36452 (17) | 0.46928 (15) | 0.0139 (4) | |
C28 | −0.00464 (19) | 0.08500 (17) | 0.13710 (15) | 0.0127 (4) | |
H28 | −0.0564 | 0.0055 | 0.1121 | 0.015* | |
C29 | −0.03050 (19) | 0.15950 (17) | 0.08046 (15) | 0.0133 (4) | |
H29 | −0.0996 | 0.1312 | 0.0197 | 0.016* | |
C30 | 0.04892 (19) | 0.27753 (17) | 0.11612 (15) | 0.0126 (4) | |
C31 | 0.1513 (2) | 0.31490 (17) | 0.20657 (16) | 0.0147 (4) | |
H31 | 0.2075 | 0.3922 | 0.2313 | 0.018* | |
C32 | 0.1690 (2) | 0.23614 (17) | 0.25979 (15) | 0.0141 (4) | |
H32 | 0.2369 | 0.2626 | 0.3211 | 0.017* | |
C33 | 0.0257 (2) | 0.37055 (17) | 0.06562 (16) | 0.0154 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.01402 (12) | 0.00961 (11) | 0.01052 (12) | 0.00377 (8) | 0.00219 (9) | 0.00485 (8) |
O1 | 0.0124 (7) | 0.0113 (6) | 0.0131 (7) | 0.0005 (5) | 0.0013 (5) | 0.0043 (5) |
O2 | 0.0155 (7) | 0.0117 (6) | 0.0130 (7) | 0.0006 (5) | 0.0008 (6) | 0.0024 (5) |
O3 | 0.0151 (7) | 0.0160 (7) | 0.0175 (7) | 0.0018 (5) | 0.0030 (6) | 0.0074 (6) |
O4 | 0.0235 (8) | 0.0179 (7) | 0.0240 (8) | −0.0022 (6) | 0.0084 (7) | −0.0005 (6) |
O5 | 0.0260 (8) | 0.0143 (7) | 0.0133 (7) | 0.0089 (6) | 0.0033 (6) | 0.0041 (6) |
O6 | 0.0199 (8) | 0.0154 (7) | 0.0327 (9) | 0.0009 (6) | 0.0035 (7) | 0.0006 (6) |
O7 | 0.0236 (8) | 0.0110 (6) | 0.0198 (8) | 0.0033 (6) | −0.0060 (6) | 0.0036 (6) |
O8 | 0.0351 (9) | 0.0116 (7) | 0.0188 (8) | −0.0032 (6) | −0.0073 (7) | 0.0078 (6) |
N1 | 0.0147 (8) | 0.0118 (7) | 0.0111 (8) | 0.0038 (6) | 0.0036 (6) | 0.0052 (6) |
N2 | 0.0185 (9) | 0.0111 (8) | 0.0168 (9) | 0.0033 (7) | −0.0033 (7) | 0.0053 (7) |
N3 | 0.0127 (8) | 0.0110 (7) | 0.0133 (8) | 0.0033 (6) | 0.0028 (6) | 0.0053 (6) |
N4 | 0.0256 (10) | 0.0099 (8) | 0.0158 (9) | −0.0006 (7) | −0.0027 (8) | 0.0071 (7) |
F1 | 0.0269 (7) | 0.0399 (8) | 0.0329 (8) | 0.0128 (6) | 0.0196 (6) | 0.0125 (6) |
F2 | 0.0289 (8) | 0.0209 (7) | 0.0419 (9) | −0.0082 (6) | 0.0086 (7) | 0.0067 (6) |
F3 | 0.0500 (10) | 0.0157 (6) | 0.0340 (8) | −0.0035 (6) | −0.0018 (7) | −0.0045 (6) |
C1 | 0.0146 (9) | 0.0109 (8) | 0.0121 (9) | 0.0033 (7) | 0.0013 (7) | 0.0063 (7) |
C2 | 0.0150 (9) | 0.0139 (9) | 0.0143 (9) | 0.0045 (7) | 0.0032 (8) | 0.0076 (7) |
C3 | 0.0164 (10) | 0.0172 (9) | 0.0149 (10) | 0.0026 (8) | 0.0021 (8) | 0.0051 (8) |
C4 | 0.0250 (11) | 0.0230 (10) | 0.0164 (11) | 0.0088 (9) | 0.0054 (9) | 0.0053 (8) |
C5 | 0.0213 (11) | 0.0276 (11) | 0.0229 (11) | 0.0122 (9) | 0.0116 (9) | 0.0132 (9) |
C6 | 0.0176 (10) | 0.0219 (10) | 0.0307 (12) | 0.0043 (8) | 0.0095 (9) | 0.0132 (9) |
C7 | 0.0175 (10) | 0.0137 (9) | 0.0202 (11) | 0.0013 (7) | 0.0048 (8) | 0.0055 (8) |
C8 | 0.0170 (10) | 0.0163 (9) | 0.0131 (9) | 0.0023 (8) | 0.0008 (8) | 0.0074 (8) |
C9 | 0.0171 (10) | 0.0153 (9) | 0.0154 (10) | 0.0004 (7) | 0.0018 (8) | 0.0074 (8) |
C10 | 0.0197 (11) | 0.0185 (10) | 0.0214 (11) | 0.0013 (8) | 0.0064 (9) | 0.0064 (8) |
C11 | 0.0276 (12) | 0.0171 (10) | 0.0238 (12) | 0.0003 (9) | 0.0068 (10) | 0.0038 (9) |
C12 | 0.0200 (11) | 0.0183 (10) | 0.0249 (12) | −0.0051 (8) | 0.0020 (9) | 0.0084 (9) |
C13 | 0.0166 (10) | 0.0248 (11) | 0.0232 (11) | 0.0018 (8) | 0.0047 (9) | 0.0118 (9) |
C14 | 0.0203 (10) | 0.0174 (9) | 0.0166 (10) | 0.0045 (8) | 0.0044 (8) | 0.0075 (8) |
C15 | 0.0238 (11) | 0.0132 (9) | 0.0144 (10) | 0.0035 (8) | 0.0065 (8) | 0.0055 (8) |
C16 | 0.0218 (10) | 0.0134 (9) | 0.0149 (10) | 0.0042 (8) | 0.0076 (8) | 0.0056 (8) |
C17 | 0.0205 (11) | 0.0178 (10) | 0.0193 (11) | 0.0030 (8) | 0.0069 (9) | 0.0027 (8) |
C18 | 0.0311 (13) | 0.0159 (10) | 0.0261 (12) | 0.0077 (9) | 0.0092 (10) | 0.0021 (9) |
C19 | 0.0357 (13) | 0.0126 (9) | 0.0188 (11) | −0.0009 (9) | 0.0018 (10) | 0.0013 (8) |
C20 | 0.0211 (11) | 0.0219 (10) | 0.0209 (11) | −0.0028 (8) | 0.0004 (9) | 0.0080 (9) |
C21 | 0.0216 (11) | 0.0184 (10) | 0.0176 (10) | 0.0050 (8) | 0.0066 (9) | 0.0073 (8) |
C22 | 0.0182 (10) | 0.0108 (8) | 0.0113 (9) | 0.0028 (7) | 0.0026 (8) | 0.0030 (7) |
C23 | 0.0170 (10) | 0.0126 (8) | 0.0113 (9) | 0.0014 (7) | −0.0013 (8) | 0.0038 (7) |
C24 | 0.0133 (9) | 0.0120 (8) | 0.0133 (9) | 0.0034 (7) | 0.0037 (8) | 0.0065 (7) |
C25 | 0.0166 (10) | 0.0106 (8) | 0.0162 (10) | 0.0017 (7) | 0.0022 (8) | 0.0053 (7) |
C26 | 0.0145 (9) | 0.0130 (9) | 0.0127 (9) | 0.0007 (7) | −0.0010 (8) | 0.0043 (7) |
C27 | 0.0145 (9) | 0.0111 (8) | 0.0158 (10) | 0.0027 (7) | 0.0014 (8) | 0.0059 (7) |
C28 | 0.0130 (9) | 0.0101 (8) | 0.0141 (9) | 0.0011 (7) | 0.0027 (8) | 0.0041 (7) |
C29 | 0.0131 (9) | 0.0135 (9) | 0.0116 (9) | 0.0019 (7) | −0.0002 (7) | 0.0047 (7) |
C30 | 0.0150 (9) | 0.0103 (8) | 0.0127 (9) | 0.0032 (7) | 0.0030 (8) | 0.0048 (7) |
C31 | 0.0152 (10) | 0.0100 (8) | 0.0173 (10) | 0.0011 (7) | 0.0015 (8) | 0.0049 (7) |
C32 | 0.0138 (9) | 0.0125 (8) | 0.0131 (9) | 0.0020 (7) | −0.0013 (8) | 0.0039 (7) |
C33 | 0.0202 (10) | 0.0119 (8) | 0.0141 (10) | 0.0019 (7) | 0.0017 (8) | 0.0065 (7) |
Cu1—O1 | 2.0661 (13) | C9—C10 | 1.391 (3) |
Cu1—O2 | 2.4581 (14) | C9—C14 | 1.389 (3) |
Cu1—O3 | 2.2397 (14) | C10—C11 | 1.386 (3) |
Cu1—O5 | 1.9701 (14) | C10—H10 | 0.9300 |
Cu1—N1 | 2.0024 (15) | C11—C12 | 1.380 (3) |
Cu1—N3 | 2.0084 (15) | C11—H11 | 0.9300 |
O1—C1 | 1.283 (2) | C13—C12 | 1.375 (3) |
O2—C1 | 1.252 (2) | C13—C14 | 1.384 (3) |
O3—C8 | 1.233 (2) | C13—H13 | 0.9300 |
O4—C8 | 1.294 (2) | C14—H14 | 0.9300 |
O4—H41 | 0.855 (18) | C16—C15 | 1.498 (3) |
O5—C15 | 1.266 (2) | C16—C17 | 1.389 (3) |
O6—C15 | 1.256 (3) | C16—C21 | 1.387 (3) |
O7—C27 | 1.237 (2) | C17—H17 | 0.9300 |
O8—C33 | 1.232 (2) | C18—C17 | 1.388 (3) |
N1—C22 | 1.338 (3) | C18—H18 | 0.9300 |
N1—C26 | 1.342 (2) | C19—C18 | 1.372 (3) |
N2—C27 | 1.331 (3) | C20—C19 | 1.372 (3) |
N2—H2A | 0.83 (3) | C20—C21 | 1.387 (3) |
N2—H2B | 0.89 (3) | C20—H20 | 0.9300 |
N3—C28 | 1.339 (2) | C21—H21 | 0.9300 |
N3—C32 | 1.345 (2) | C22—H22 | 0.9300 |
N4—C33 | 1.329 (3) | C23—C22 | 1.393 (3) |
N4—H4A | 0.79 (3) | C23—C24 | 1.390 (3) |
N4—H4B | 0.81 (3) | C23—H23 | 0.9300 |
F1—C5 | 1.361 (2) | C24—C27 | 1.515 (2) |
F2—C12 | 1.356 (2) | C25—C24 | 1.387 (3) |
F3—C19 | 1.362 (2) | C25—C26 | 1.381 (3) |
C1—C2 | 1.494 (3) | C25—H25 | 0.9300 |
C2—C3 | 1.393 (3) | C26—H26 | 0.9300 |
C2—C7 | 1.388 (3) | C28—C29 | 1.387 (2) |
C3—H3 | 0.9300 | C28—H28 | 0.9300 |
C4—C3 | 1.388 (3) | C29—H29 | 0.9300 |
C4—C5 | 1.372 (3) | C30—C31 | 1.385 (3) |
C4—H4 | 0.9300 | C30—C29 | 1.394 (3) |
C6—C5 | 1.373 (3) | C31—C32 | 1.383 (3) |
C6—C7 | 1.381 (3) | C31—H31 | 0.9300 |
C6—H6 | 0.9300 | C32—H32 | 0.9300 |
C7—H7 | 0.9300 | C33—C30 | 1.510 (2) |
C9—C8 | 1.490 (3) | ||
O1—Cu1—O3 | 95.03 (5) | C12—C13—C14 | 118.1 (2) |
O1—Cu1—O2 | 57.75 (5) | C12—C13—H13 | 120.9 |
O5—Cu1—O1 | 151.82 (6) | C14—C13—H13 | 120.9 |
O5—Cu1—O3 | 113.15 (6) | C9—C14—H14 | 119.7 |
O5—Cu1—N1 | 91.60 (6) | C13—C14—C9 | 120.56 (19) |
O5—Cu1—N3 | 91.70 (6) | C13—C14—H14 | 119.7 |
N1—Cu1—O1 | 87.92 (6) | O5—C15—C16 | 116.89 (19) |
N1—Cu1—O3 | 90.60 (6) | O6—C15—O5 | 125.26 (19) |
N1—Cu1—N3 | 173.23 (7) | O6—C15—C16 | 117.83 (18) |
N3—Cu1—O1 | 86.39 (6) | C17—C16—C15 | 119.70 (19) |
N3—Cu1—O3 | 93.54 (6) | C21—C16—C15 | 120.46 (18) |
C1—O1—Cu1 | 98.92 (11) | C21—C16—C17 | 119.79 (19) |
C8—O3—Cu1 | 131.63 (13) | C16—C17—H17 | 119.9 |
C8—O4—H41 | 118 (2) | C18—C17—C16 | 120.3 (2) |
C15—O5—Cu1 | 127.21 (13) | C18—C17—H17 | 119.9 |
C22—N1—Cu1 | 120.76 (13) | C17—C18—H18 | 121.0 |
C22—N1—C26 | 118.27 (16) | C19—C18—C17 | 118.1 (2) |
C26—N1—Cu1 | 119.79 (13) | C19—C18—H18 | 121.0 |
C27—N2—H2A | 116 (2) | F3—C19—C18 | 118.3 (2) |
C27—N2—H2B | 123.0 (18) | F3—C19—C20 | 118.2 (2) |
H2A—N2—H2B | 121 (3) | C18—C19—C20 | 123.4 (2) |
C28—N3—Cu1 | 122.20 (12) | C19—C20—C21 | 117.9 (2) |
C28—N3—C32 | 118.18 (16) | C19—C20—H20 | 121.1 |
C32—N3—Cu1 | 119.29 (13) | C21—C20—H20 | 121.1 |
C33—N4—H4A | 123.1 (18) | C16—C21—H21 | 119.7 |
C33—N4—H4B | 118.4 (18) | C20—C21—C16 | 120.6 (2) |
H4A—N4—H4B | 118 (3) | C20—C21—H21 | 119.7 |
O1—C1—C2 | 119.12 (17) | N1—C22—C23 | 122.71 (17) |
O2—C1—O1 | 121.48 (18) | N1—C22—H22 | 118.6 |
O2—C1—C2 | 119.40 (17) | C23—C22—H22 | 118.6 |
C3—C2—C1 | 121.88 (18) | C22—C23—H23 | 120.7 |
C7—C2—C1 | 118.57 (18) | C24—C23—C22 | 118.69 (18) |
C7—C2—C3 | 119.54 (19) | C24—C23—H23 | 120.7 |
C2—C3—H3 | 119.9 | C23—C24—C27 | 123.94 (17) |
C4—C3—C2 | 120.1 (2) | C25—C24—C23 | 118.34 (17) |
C4—C3—H3 | 119.9 | C25—C24—C27 | 117.70 (17) |
C3—C4—H4 | 120.8 | C24—C25—H25 | 120.3 |
C5—C4—C3 | 118.3 (2) | C26—C25—C24 | 119.47 (18) |
C5—C4—H4 | 120.8 | C26—C25—H25 | 120.3 |
F1—C5—C4 | 118.8 (2) | N1—C26—C25 | 122.45 (18) |
F1—C5—C6 | 118.1 (2) | N1—C26—H26 | 118.8 |
C4—C5—C6 | 123.2 (2) | C25—C26—H26 | 118.8 |
C5—C6—C7 | 118.0 (2) | O7—C27—N2 | 123.15 (17) |
C5—C6—H6 | 121.0 | O7—C27—C24 | 118.91 (17) |
C7—C6—H6 | 121.0 | N2—C27—C24 | 117.93 (17) |
C2—C7—H7 | 119.6 | N3—C28—C29 | 122.77 (17) |
C6—C7—C2 | 120.9 (2) | N3—C28—H28 | 118.6 |
C6—C7—H7 | 119.6 | C29—C28—H28 | 118.6 |
O3—C8—O4 | 124.89 (19) | C28—C29—C30 | 118.84 (18) |
O3—C8—C9 | 121.66 (18) | C28—C29—H29 | 120.6 |
O4—C8—C9 | 113.45 (18) | C30—C29—H29 | 120.6 |
C10—C9—C8 | 119.82 (19) | C29—C30—C33 | 124.01 (17) |
C14—C9—C8 | 120.45 (18) | C31—C30—C29 | 118.32 (17) |
C14—C9—C10 | 119.73 (19) | C31—C30—C33 | 117.58 (17) |
C9—C10—H10 | 119.8 | C30—C31—H31 | 120.3 |
C11—C10—C9 | 120.4 (2) | C32—C31—C30 | 119.37 (18) |
C11—C10—H10 | 119.8 | C32—C31—H31 | 120.3 |
C10—C11—H11 | 121.0 | N3—C32—C31 | 122.47 (18) |
C12—C11—C10 | 118.0 (2) | N3—C32—H32 | 118.8 |
C12—C11—H11 | 121.0 | C31—C32—H32 | 118.8 |
F2—C12—C11 | 118.9 (2) | O8—C33—N4 | 123.07 (18) |
F2—C12—C13 | 118.0 (2) | O8—C33—C30 | 118.78 (17) |
C13—C12—C11 | 123.1 (2) | N4—C33—C30 | 118.15 (17) |
O3—Cu1—O1—C1 | −179.56 (10) | C7—C6—C5—C4 | 1.0 (3) |
O5—Cu1—O1—C1 | 0.34 (17) | C5—C6—C7—C2 | −1.1 (3) |
N1—Cu1—O1—C1 | −89.15 (11) | C10—C9—C8—O3 | 7.4 (3) |
N3—Cu1—O1—C1 | 87.19 (11) | C10—C9—C8—O4 | −173.04 (18) |
O1—Cu1—O3—C8 | 176.08 (16) | C14—C9—C8—O3 | −172.14 (18) |
O5—Cu1—O3—C8 | −3.87 (18) | C14—C9—C8—O4 | 7.4 (3) |
N1—Cu1—O3—C8 | 88.12 (17) | C8—C9—C10—C11 | 179.4 (2) |
N3—Cu1—O3—C8 | −97.24 (17) | C14—C9—C10—C11 | −1.0 (3) |
O1—Cu1—O5—C15 | 133.63 (16) | C8—C9—C14—C13 | 179.55 (19) |
O3—Cu1—O5—C15 | −46.47 (17) | C10—C9—C14—C13 | 0.0 (3) |
N1—Cu1—O5—C15 | −137.80 (17) | C9—C10—C11—C12 | 0.7 (3) |
N3—Cu1—O5—C15 | 48.11 (17) | C10—C11—C12—F2 | −178.4 (2) |
O1—Cu1—N1—C22 | 112.45 (15) | C10—C11—C12—C13 | 0.7 (3) |
O1—Cu1—N1—C26 | −54.95 (15) | C14—C13—C12—F2 | 177.43 (19) |
O3—Cu1—N1—C22 | −152.53 (15) | C14—C13—C12—C11 | −1.7 (3) |
O3—Cu1—N1—C26 | 40.06 (15) | C12—C13—C14—C9 | 1.3 (3) |
O5—Cu1—N1—C22 | −39.36 (15) | C17—C16—C15—O5 | −177.41 (19) |
O5—Cu1—N1—C26 | 153.23 (15) | C17—C16—C15—O6 | 4.4 (3) |
O1—Cu1—N3—C28 | 70.36 (15) | C21—C16—C15—O5 | 4.9 (3) |
O1—Cu1—N3—C32 | −102.90 (15) | C21—C16—C15—O6 | −173.34 (19) |
O3—Cu1—N3—C28 | −24.46 (15) | C15—C16—C17—C18 | −178.52 (19) |
O3—Cu1—N3—C32 | 162.27 (14) | C21—C16—C17—C18 | −0.8 (3) |
O5—Cu1—N3—C28 | −137.78 (15) | C15—C16—C21—C20 | 177.92 (19) |
O5—Cu1—N3—C32 | 48.95 (15) | C17—C16—C21—C20 | 0.2 (3) |
Cu1—O1—C1—O2 | 2.02 (18) | C19—C18—C17—C16 | 0.4 (3) |
Cu1—O1—C1—C2 | −177.69 (13) | F3—C19—C18—C17 | −179.8 (2) |
Cu1—O3—C8—O4 | 21.5 (3) | C20—C19—C18—C17 | 0.6 (4) |
Cu1—O3—C8—C9 | −159.07 (13) | C21—C20—C19—F3 | 179.21 (19) |
Cu1—O5—C15—O6 | 28.1 (3) | C21—C20—C19—C18 | −1.1 (3) |
Cu1—O5—C15—C16 | −149.96 (14) | C19—C20—C21—C16 | 0.7 (3) |
Cu1—N1—C22—C23 | −165.88 (15) | C24—C23—C22—N1 | 0.5 (3) |
C26—N1—C22—C23 | 1.7 (3) | C22—C23—C24—C25 | −2.1 (3) |
Cu1—N1—C26—C25 | 165.40 (15) | C22—C23—C24—C27 | 176.20 (18) |
C22—N1—C26—C25 | −2.3 (3) | C23—C24—C27—O7 | −172.7 (2) |
Cu1—N3—C28—C29 | −175.61 (14) | C23—C24—C27—N2 | 6.4 (3) |
C32—N3—C28—C29 | −2.3 (3) | C25—C24—C27—O7 | 5.6 (3) |
Cu1—N3—C32—C31 | 174.44 (15) | C25—C24—C27—N2 | −175.24 (18) |
C28—N3—C32—C31 | 0.9 (3) | C26—C25—C24—C23 | 1.6 (3) |
O1—C1—C2—C3 | −11.5 (3) | C26—C25—C24—C27 | −176.86 (18) |
O1—C1—C2—C7 | 169.33 (17) | C24—C25—C26—N1 | 0.7 (3) |
O2—C1—C2—C3 | 168.76 (17) | N3—C28—C29—C30 | 1.6 (3) |
O2—C1—C2—C7 | −10.4 (3) | C31—C30—C29—C28 | 0.5 (3) |
C1—C2—C3—C4 | −179.11 (18) | C33—C30—C29—C28 | −175.99 (18) |
C7—C2—C3—C4 | 0.0 (3) | C29—C30—C31—C32 | −1.8 (3) |
C1—C2—C7—C6 | 179.76 (18) | C33—C30—C31—C32 | 174.95 (18) |
C3—C2—C7—C6 | 0.6 (3) | C30—C31—C32—N3 | 1.1 (3) |
C5—C4—C3—C2 | −0.1 (3) | O8—C33—C30—C29 | 165.5 (2) |
C3—C4—C5—F1 | −179.61 (18) | O8—C33—C30—C31 | −10.9 (3) |
C3—C4—C5—C6 | −0.4 (3) | N4—C33—C30—C29 | −13.6 (3) |
C7—C6—C5—F1 | −179.78 (18) | N4—C33—C30—C31 | 169.95 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O7i | 0.83 (3) | 2.17 (4) | 2.990 (3) | 175 (3) |
N2—H2B···O2ii | 0.90 (3) | 2.07 (3) | 2.943 (2) | 163 (3) |
N4—H4A···O1iii | 0.79 (3) | 2.18 (3) | 2.953 (2) | 165 (3) |
N4—H4B···O8iv | 0.80 (3) | 2.08 (3) | 2.880 (3) | 174 (2) |
O4—H41···O6 | 0.85 (3) | 1.62 (3) | 2.457 (2) | 169 (3) |
C4—H4···F2v | 0.93 | 2.50 | 3.248 (3) | 137 |
C23—H23···O2ii | 0.93 | 2.42 | 3.333 (2) | 167 |
C25—H25···O8vi | 0.93 | 2.60 | 3.275 (2) | 130 |
C31—H31···O7vii | 0.93 | 2.55 | 3.251 (3) | 132 |
Symmetry codes: (i) −x+1, −y−1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x, −y, −z; (iv) −x, −y+1, −z; (v) −x, −y−1, −z; (vi) x, y−1, z; (vii) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] |
Mr | 726.12 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 10.3370 (2), 11.6707 (3), 14.1121 (4) |
α, β, γ (°) | 110.824 (4), 101.333 (3), 95.761 (2) |
V (Å3) | 1533.09 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.79 |
Crystal size (mm) | 0.48 × 0.32 × 0.24 |
Data collection | |
Diffractometer | Bruker APEXII Kappa CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.745, 0.827 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27657, 7686, 6584 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.671 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.087, 1.08 |
No. of reflections | 7686 |
No. of parameters | 461 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.59, −0.53 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2008), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Cu1—O1 | 2.0661 (13) | Cu1—O5 | 1.9701 (14) |
Cu1—O2 | 2.4581 (14) | Cu1—N1 | 2.0024 (15) |
Cu1—O3 | 2.2397 (14) | Cu1—N3 | 2.0084 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O7i | 0.83 (3) | 2.17 (4) | 2.990 (3) | 175 (3) |
N2—H2B···O2ii | 0.90 (3) | 2.07 (3) | 2.943 (2) | 163 (3) |
N4—H4A···O1iii | 0.79 (3) | 2.18 (3) | 2.953 (2) | 165 (3) |
N4—H4B···O8iv | 0.80 (3) | 2.08 (3) | 2.880 (3) | 174 (2) |
O4—H41···O6 | 0.85 (3) | 1.62 (3) | 2.457 (2) | 169 (3) |
C4—H4···F2v | 0.93 | 2.50 | 3.248 (3) | 137 |
C23—H23···O2ii | 0.93 | 2.42 | 3.333 (2) | 167 |
C25—H25···O8vi | 0.93 | 2.60 | 3.275 (2) | 130 |
C31—H31···O7vii | 0.93 | 2.55 | 3.251 (3) | 132 |
Symmetry codes: (i) −x+1, −y−1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x, −y, −z; (iv) −x, −y+1, −z; (v) −x, −y−1, −z; (vi) x, y−1, z; (vii) x, y+1, z. |
Acknowledgements
The authors are indebted to Anadolu University and the Medicinal Plants and Medicine Research Centre of Anadolu University, Eskişehir, Turkey, for the use of the X-ray diffractometer. This work was financially supported by the Scientific and Technological Research Council of Turkey (grant No. 108T657).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing investigations of transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
The title mononuclear CuII complex, (I), (Fig. 1), consisting of two nicotinamide (NA), two 4-fluorobenzoate (PFB) and one 4-fluorobenzoic acid (PFBA) ligands. The CuII center is coordinated by four O atoms from two (PFB) and one (PFBA) ligands, which act in different modes - monodentate, bidentate and monodentate, respectively, and two N atoms of two nicotinamide ligands (Fig. 1). So that, the molecule is six-coordinated. The structures of similar complexes of CuII, CoII, NiII and ZnII ions, [Cu(C8H7O2)2(C6H6N2O)2].2(H2O), (II) (Hökelek et al., 2010c), [Co(C8H7O3)2(C6H6N2O)(H2O)2], (III) (Hökelek et al., 2010e), [Co(C8H7O3)2(C6H6N2O)2(H2O)2].2H2O, (IV) (Hökelek et al., 2010b), [Ni(C8H7O3)2(C6H6N2O)2(H2O)2].2H2O, (V) (Hökelek et al., 2010a), [Zn(C8H8NO2)2(C6H6N2O)2].H2O, (VI) (Hökelek et al., 2009a), [Zn(C9H10NO2)2(C6H6N2O)2(H2O)2], (VII) (Hökelek et al., 2009b) and [Zn(C8H7O3)2(C6H6N2O)2], (VIII) (Hökelek et al., 2010d) have also been determined.
In the title compound (Fig. 1), two Cu—O bond distances [2.4581 (14) and 2.2397 (14) Å] are significantly longer than the other two, and the average Cu—O bond length is 2.1835 (14) Å. The Cu1 atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2), (O3/C8/O4) and (O5/C15/O6) by 0.0717 (3), 0.6121 (3) and 0.7391 (3) Å, respectively. The intramolecular O—H···O hydrogen bond links the monodentately coordinated (PFB) and (PFBA) ligands (Table 1). The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2–C7), B (C9–C14) and C (C16–C21) are 11.08 (14), 7.62 (13) and 5.73 (11)°, respectively, while those between rings A, B, C, D (N1/C22–C26), E (N3/C28–C32) and F (Cu1/O1/C1/O2) are A/B = 15.62 (6), A/C = 33.71 (8), A/D = 78.60 (6), A/E = 81.00 (6), A/F = 11.19 (6), B/C = 26.60 (8), B/D = 70.02 (6), B/E = 86.56 (6), B/F = 23.92 (6), C/D = 44.98 (6), C/E = 66.30 (6), C/F = 32.33 (6), D/E = 26.76 (6) and D/F = 75.15 (5)°.
In (I), the O1—Cu1—O2 angle is 57.75 (2)°. The corresponding O—M—O (where M is a metal) angles are 60.32 (4)° in (III), 59.02 (8)° in (VI), 60.03 (6)° in (VII), 57.53 (5)°, 56.19 (5)° and 59.04 (4)° in (VIII) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) [(IX); Greenaway et al., 1984].
In the crystal structure, intermolecular N—H···O, C—H···F and C—H···O hydrogen bonds link the molecules into a three-dimensional network (Table 1 and Fig. 2). The π–π contacts between the benzene rings, Cg1–Cg1i, Cg1–Cg2ii and Cg2–Cg3iii [symmetry codes: (i) 1 - x, -y, -z, (ii) 1 + x, y, z, (iii) -x, -y, 1 - z, where Cg1, Cg2 and Cg3 are the centroids of the rings A (C2–C7), B (C9–C14) and C (C16–C21), respectively] may also stabilize the structure, with centroid–centroid distances of 3.5517 (15), 3.8456 (14) and 3.9265 (13) Å, respectively.