organic compounds
4,4′-Di-tert-butyl-2,2′-dipyridinium dichloride
aDepartment of Chemistry, University of Aveiro, CICECO, 3810-193 Aveiro, Portugal
*Correspondence e-mail: filipe.paz@ua.pt
In the title compound, C18H26N22+·2Cl−, the complete dication is generated by crystallographic inversion symmetry; both N atoms are protonated and engaged in strong and highly directional N—H⋯Cl hydrogen bonds. Additional weak C—H⋯Cl contacts promote the formation of a tape along ca. [110]. The can be described by the parallel packing of these tapes. The crystal studied was a non-merohedral twin with [−1 0 0, 0 −1 0, −0.887 0.179 1] and the final BASF parameter refining to 0.026 (2) .
Related literature
For metallic complexes of 4,4′-di-tert-butyl-2,2′-dipyridyl, see: Momeni et al. (2010); Li et al. (2005). For related organic crystals from our research groups, see: Amarante, Figueiredo et al. (2009); Amarante, Gonçalves & Almeida Paz (2009); Amarante, Paz et al. (2009); Batsanov et al. (2007); Coelho et al. (2007); Herrmann et al. (1990); Paz & Klinowski (2003); Paz et al. (2002). For graph-set notation, see: Grell et al. (1999). For a description of the Cambridge Structural Database, see: Allen (2002). For the see: Cooper et al. (2002).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2006); cell SAINT-Plus (Bruker, 2005); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: DIAMOND (Brandenburg, 2009); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811025529/bt5558sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811025529/bt5558Isup2.hkl
Irregular, poorly-formed crystals of the title compound were isolated as a minor secondary product during the preparation of the oxodiperoxo complex MoO(O2)2(tbbpy) (where tbbpy stands for 4,4'-di-tert-butyl-2,2'-dipyridyl) previously reported by our group (Amarante & Paz et al., 2009).
Hydrogen atoms bound to carbon have been placed at their idealized positions and were included in the final structural model in riding-motion approximation with C—H distances of 0.95 Å (aromatic C—H) and 0.98 Å (terminal —CH3 groups). The hydrogen atom bound to the nitrogen atom was directly located from difference Fourier maps and was included in the final structural model with the N—H distance restrained to 0.95 Å. The isotropic displacement parameters for these hydrogen atoms were fixed at 1.2 (for the former family of hydrogen atoms) or 1.5×Ueq (for the two latter families) of the respective parent atoms.
The final structural
was performed by using the [-1 0 0, 0 - 1 0, -0.887 0.179 1] (Cooper et al., 2002) with the final BASF parameter refining to 0.026 (2).Data collection: APEX2 (Bruker, 2006); cell
SAINT-Plus (Bruker, 2005); data reduction: SAINT-Plus (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C18H26N22+·2Cl− | Z = 1 |
Mr = 341.31 | F(000) = 182 |
Triclinic, P1 | Dx = 1.246 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.9017 (8) Å | Cell parameters from 3784 reflections |
b = 6.1949 (8) Å | θ = 3.2–28.8° |
c = 13.0758 (17) Å | µ = 0.36 mm−1 |
α = 89.633 (8)° | T = 150 K |
β = 79.049 (7)° | Block, colourless |
γ = 75.915 (7)° | 0.12 × 0.03 × 0.03 mm |
V = 454.84 (10) Å3 |
Bruker X8 KappaCCD APEXII diffractometer | 2054 independent reflections |
Radiation source: fine-focus sealed tube | 1654 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.074 |
ω and ϕ scans | θmax = 27.5°, θmin = 3.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998) | h = −7→7 |
Tmin = 0.959, Tmax = 0.989 | k = −8→8 |
14551 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.083 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.188 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.25 | w = 1/[σ2(Fo2) + (0.P)2 + 2.3813P] where P = (Fo2 + 2Fc2)/3 |
2054 reflections | (Δ/σ)max < 0.001 |
107 parameters | Δρmax = 0.72 e Å−3 |
1 restraint | Δρmin = −0.39 e Å−3 |
C18H26N22+·2Cl− | γ = 75.915 (7)° |
Mr = 341.31 | V = 454.84 (10) Å3 |
Triclinic, P1 | Z = 1 |
a = 5.9017 (8) Å | Mo Kα radiation |
b = 6.1949 (8) Å | µ = 0.36 mm−1 |
c = 13.0758 (17) Å | T = 150 K |
α = 89.633 (8)° | 0.12 × 0.03 × 0.03 mm |
β = 79.049 (7)° |
Bruker X8 KappaCCD APEXII diffractometer | 2054 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998) | 1654 reflections with I > 2σ(I) |
Tmin = 0.959, Tmax = 0.989 | Rint = 0.074 |
14551 measured reflections |
R[F2 > 2σ(F2)] = 0.083 | 1 restraint |
wR(F2) = 0.188 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.25 | Δρmax = 0.72 e Å−3 |
2054 reflections | Δρmin = −0.39 e Å−3 |
107 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | −0.5222 (2) | 0.2342 (2) | 1.16162 (10) | 0.0234 (3) | |
N1 | −0.1611 (7) | 0.2931 (6) | 0.9791 (3) | 0.0167 (8) | |
H1 | −0.253 (8) | 0.281 (9) | 1.046 (2) | 0.025* | |
C1 | −0.1874 (8) | 0.1531 (8) | 0.9071 (4) | 0.0189 (10) | |
H1A | −0.2924 | 0.0589 | 0.9262 | 0.023* | |
C2 | −0.0648 (8) | 0.1433 (8) | 0.8057 (4) | 0.0195 (10) | |
H2A | −0.0832 | 0.0419 | 0.7555 | 0.023* | |
C3 | 0.0868 (8) | 0.2843 (7) | 0.7777 (4) | 0.0164 (9) | |
C4 | 0.1157 (8) | 0.4233 (8) | 0.8556 (4) | 0.0196 (10) | |
H4A | 0.2225 | 0.5166 | 0.8387 | 0.024* | |
C5 | −0.0083 (8) | 0.4275 (7) | 0.9569 (3) | 0.0150 (9) | |
C6 | 0.2115 (9) | 0.3004 (8) | 0.6655 (4) | 0.0186 (10) | |
C7 | 0.1739 (10) | 0.1275 (9) | 0.5916 (4) | 0.0295 (12) | |
H7A | 0.2402 | −0.0225 | 0.6134 | 0.044* | |
H7B | 0.2543 | 0.1459 | 0.5204 | 0.044* | |
H7C | 0.0031 | 0.1484 | 0.5935 | 0.044* | |
C8 | 0.4802 (10) | 0.2668 (10) | 0.6597 (4) | 0.0303 (12) | |
H8A | 0.5076 | 0.3804 | 0.7045 | 0.045* | |
H8B | 0.5581 | 0.2801 | 0.5876 | 0.045* | |
H8C | 0.5466 | 0.1185 | 0.6834 | 0.045* | |
C9 | 0.1040 (12) | 0.5355 (9) | 0.6314 (4) | 0.0358 (14) | |
H9A | −0.0690 | 0.5593 | 0.6396 | 0.054* | |
H9B | 0.1730 | 0.5500 | 0.5581 | 0.054* | |
H9C | 0.1396 | 0.6468 | 0.6746 | 0.054* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0211 (6) | 0.0222 (6) | 0.0284 (6) | −0.0127 (4) | 0.0011 (5) | −0.0006 (4) |
N1 | 0.0168 (19) | 0.0172 (18) | 0.020 (2) | −0.0089 (15) | −0.0062 (15) | 0.0031 (15) |
C1 | 0.018 (2) | 0.016 (2) | 0.027 (2) | −0.0082 (18) | −0.0080 (19) | 0.0013 (18) |
C2 | 0.019 (2) | 0.014 (2) | 0.026 (3) | −0.0034 (18) | −0.0075 (19) | −0.0018 (18) |
C3 | 0.014 (2) | 0.014 (2) | 0.020 (2) | −0.0001 (17) | −0.0051 (18) | −0.0012 (17) |
C4 | 0.016 (2) | 0.022 (2) | 0.024 (2) | −0.0095 (19) | −0.0028 (19) | 0.0025 (19) |
C5 | 0.012 (2) | 0.015 (2) | 0.021 (2) | −0.0048 (17) | −0.0073 (17) | 0.0014 (18) |
C6 | 0.023 (2) | 0.017 (2) | 0.017 (2) | −0.0079 (19) | −0.0023 (19) | 0.0010 (17) |
C7 | 0.034 (3) | 0.032 (3) | 0.021 (3) | −0.012 (2) | 0.002 (2) | −0.009 (2) |
C8 | 0.023 (3) | 0.040 (3) | 0.028 (3) | −0.013 (2) | 0.000 (2) | −0.002 (2) |
C9 | 0.052 (4) | 0.025 (3) | 0.022 (3) | 0.001 (3) | −0.001 (3) | 0.005 (2) |
N1—C1 | 1.340 (6) | C6—C7 | 1.530 (7) |
N1—C5 | 1.361 (5) | C6—C8 | 1.536 (7) |
N1—H1 | 0.952 (10) | C6—C9 | 1.541 (7) |
C1—C2 | 1.378 (7) | C7—H7A | 0.9800 |
C1—H1A | 0.9500 | C7—H7B | 0.9800 |
C2—C3 | 1.396 (6) | C7—H7C | 0.9800 |
C2—H2A | 0.9500 | C8—H8A | 0.9800 |
C3—C4 | 1.399 (6) | C8—H8B | 0.9800 |
C3—C6 | 1.526 (6) | C8—H8C | 0.9800 |
C4—C5 | 1.383 (6) | C9—H9A | 0.9800 |
C4—H4A | 0.9500 | C9—H9B | 0.9800 |
C5—C5i | 1.478 (9) | C9—H9C | 0.9800 |
C1—N1—C5 | 122.0 (4) | C3—C6—C9 | 106.8 (4) |
C1—N1—H1 | 113 (3) | C7—C6—C9 | 109.1 (4) |
C5—N1—H1 | 125 (3) | C8—C6—C9 | 109.9 (4) |
N1—C1—C2 | 121.2 (4) | C6—C7—H7A | 109.5 |
N1—C1—H1A | 119.4 | C6—C7—H7B | 109.5 |
C2—C1—H1A | 119.4 | H7A—C7—H7B | 109.5 |
C1—C2—C3 | 119.1 (4) | C6—C7—H7C | 109.5 |
C1—C2—H2A | 120.4 | H7A—C7—H7C | 109.5 |
C3—C2—H2A | 120.4 | H7B—C7—H7C | 109.5 |
C2—C3—C4 | 118.1 (4) | C6—C8—H8A | 109.5 |
C2—C3—C6 | 122.7 (4) | C6—C8—H8B | 109.5 |
C4—C3—C6 | 119.1 (4) | H8A—C8—H8B | 109.5 |
C5—C4—C3 | 121.2 (4) | C6—C8—H8C | 109.5 |
C5—C4—H4A | 119.4 | H8A—C8—H8C | 109.5 |
C3—C4—H4A | 119.4 | H8B—C8—H8C | 109.5 |
N1—C5—C4 | 118.3 (4) | C6—C9—H9A | 109.5 |
N1—C5—C5i | 117.1 (5) | C6—C9—H9B | 109.5 |
C4—C5—C5i | 124.6 (5) | H9A—C9—H9B | 109.5 |
C3—C6—C7 | 112.4 (4) | C6—C9—H9C | 109.5 |
C3—C6—C8 | 110.2 (4) | H9A—C9—H9C | 109.5 |
C7—C6—C8 | 108.5 (4) | H9B—C9—H9C | 109.5 |
C5—N1—C1—C2 | −1.8 (7) | C3—C4—C5—N1 | −0.3 (7) |
N1—C1—C2—C3 | −0.9 (7) | C3—C4—C5—C5i | −178.7 (5) |
C1—C2—C3—C4 | 2.8 (7) | C2—C3—C6—C7 | −6.6 (6) |
C1—C2—C3—C6 | −174.2 (4) | C4—C3—C6—C7 | 176.5 (4) |
C2—C3—C4—C5 | −2.2 (7) | C2—C3—C6—C8 | −127.7 (5) |
C6—C3—C4—C5 | 174.9 (4) | C4—C3—C6—C8 | 55.4 (6) |
C1—N1—C5—C4 | 2.4 (6) | C2—C3—C6—C9 | 113.0 (5) |
C1—N1—C5—C5i | −179.1 (5) | C4—C3—C6—C9 | −64.0 (6) |
Symmetry code: (i) −x, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Cl1 | 0.95 (1) | 2.05 (2) | 2.967 (4) | 162 (5) |
C1—H1A···Cl1ii | 0.95 | 2.70 | 3.479 (3) | 140 |
C4—H4A···Cl1i | 0.95 | 2.61 | 3.543 (9) | 166 |
Symmetry codes: (i) −x, −y+1, −z+2; (ii) −x−1, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C18H26N22+·2Cl− |
Mr | 341.31 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 150 |
a, b, c (Å) | 5.9017 (8), 6.1949 (8), 13.0758 (17) |
α, β, γ (°) | 89.633 (8), 79.049 (7), 75.915 (7) |
V (Å3) | 454.84 (10) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.36 |
Crystal size (mm) | 0.12 × 0.03 × 0.03 |
Data collection | |
Diffractometer | Bruker X8 KappaCCD APEXII diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1998) |
Tmin, Tmax | 0.959, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14551, 2054, 1654 |
Rint | 0.074 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.083, 0.188, 1.25 |
No. of reflections | 2054 |
No. of parameters | 107 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.72, −0.39 |
Computer programs: APEX2 (Bruker, 2006), SAINT-Plus (Bruker, 2005), SHELXTL (Sheldrick, 2008), DIAMOND (Brandenburg, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Cl1 | 0.952 (10) | 2.05 (2) | 2.967 (4) | 162 (5) |
C1—H1A···Cl1i | 0.95 | 2.70 | 3.479 (3) | 140 |
C4—H4A···Cl1ii | 0.95 | 2.61 | 3.543 (9) | 166 |
Symmetry codes: (i) −x−1, −y, −z+2; (ii) −x, −y+1, −z+2. |
Acknowledgements
We are grateful to the Fundação para a Ciência e a Tecnologia (FCT, Portugal) for their general financial support, for a PhD research grant No. SFRH/BD/64224/2009 (to TRA), and for specific funding toward the purchase of the single-crystal diffractometer.
References
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4,4'-Di-tert-butyl-2,2'-dipyridyl is a versatile N,N'-chelating organic ligand derived from the widely employed 2,2'-bipyridine molecule by the inclusion of two bulky t-butyl substituent groups at the 4 and 4' positions. A search in the Cambridge Structural Database (CSD, Version 5.32, November 2010 with three updates) (Allen, 2002) reveals that this molecule forms relatively stable complexes with a large range of metallic cations, including lanthanides, actinides and, mainly, d-block cations. Surprisingly, not many crystallographic reports are known in which 4,4'-di-tert-butyl-2,2'-dipyridyl is chelated to either s- or p-block cations: there is a single report in the literature of an organometallic complex with Na+ by Li et al. (2005), and another very recent with Sn4+ by Momeni et al. (2010). Concerning organic crystals, besides the crystal structure of 4,4'-di-tert-butyl-2,2'-dipyridyl which was recently reported by our group (Amarante & Figueiredo et al., 2009), there is a single crystallographic determination in which this molecule co-crystallizes with hexafluorobenzene (Batsanov et al., 2007). As a continuation of our on-going interest in organic crystals based on pyridine derivatives (Amarante & Gonçalves et al., 2009; Coelho et al., 2007; Paz & Klinowski, 2003; Paz et al., 2002), here we wish to report the crystal structure of the title compound (I) at 150 K, which is an organic salt with chloride anions. Noteworthy, a search in the literature reveals the existence of only one other salt of protonated 4,4'-di-tert-butyl-2,2'-dipyridyl moieties, being reported by Herrmann et al. (1990) and using perrhenate as the charge-balancing anion.
The asymmetric unit of the title compound is composed of half of a 4,4'-di-tert-butyl-2,2'-dipyridinium cation (the molecule has its geometrical centre located over an inversion center) and by a single chloride anion strongly hydrogen bonded to the neighbouring N+—H group as depicted in Figure 1. As a consequence, the 4,4'-di-tert-butyl-2,2'-dipyridinium cation adopts a typical trans conformation around the central C—C bond, very much similar to that observed by us in the crystal structure of the molecule itself (Amarante & Figueiredo et al., 2009) and also by Batsanov et al. (2007) in the co-crystal with hexafluorobenzene. This conformation permits a significant reduction of the overall steric repulsion due to the large tert-butyl substituent groups.
Each diprotonated organic cation is engaged in a strong and highly directional N+—H···Cl- hydrogen bonding interaction with the charge-balancing anions (Table 1 and Figures 1 and 2). These intermolecular connections are further strengthened by the presence of a number of weak C—H···Cl contacts as depicted in Figure 2 (see geometrical details in Table 2), leading to the formation of a supramolecular hydrogen-bonded tape composed of alternating R12(7) and R24(10) graph set motifs (Grell et al., 1999). The crystal structure of the title compound is obtained by the close packing of these supramolecular tapes as shown in Figure 3.