organic compounds
2-[4-(4-Methylphenylsulfonyl)piperazin-1-yl]-1-(4,5,6,7-tetrahydrothieno[3,2-c]pyridin-5-yl)ethanone
aTianjin Medical University, Tianjin 300070, People's Republic of China, and bTianjin Institute of Pharmaceutical Research, Tianjin, 300193, People's Republic of China
*Correspondence e-mail: liudk@tjipr.com
In the title thienopyridine derivative, C20H25N3O3S2, the piperazine ring exhibits a chair conformation and the tetrahydropyridine ring exhibits a half-chair conformation. The folded conformation of the molecule is defined by the N—C—C—N torsion angle of −70.20 (2) °. Intermolecular C—H⋯S and C—H⋯O hydrogen bonds help to establish the packing.
Related literature
For background to the bioactivity and applications of the title compound, see: Cattaneo (2009); Wallentin (2009). For a related structure, see: Zhi et al. (2011). For the synthesis of the title compound, see: Liu et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005).
Supporting information
10.1107/S1600536811028716/fl2350sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811028716/fl2350Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811028716/fl2350Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536811028716/fl2350Isup4.cml
2-Chloroacetyl chloride was added dropwise into a mixture of 4,5,6,7-tetrahydrothieno[3,2-c]pyridine, dichloromethane and TEA at 263k-273k. After stirring for 3 h, the solvent was evaporated and a light yellow oily substance was obtained by silica gel
The light yellow oily substance was then dissloved in a mixture of acetonitrile, TEA and 1-tosylpiperazine. After stirring for 5 h, the title compound was obtained by silica gel Crystallization of the resultingg white solid from methanol afforded white crystals suitble for X-ray analysis.The H atoms were positioned geometrioncally and refined using a riding model with d(C—H)=0.95–0.99 Å, and Uiso(H)=1.2Ueq(CH and CH2) or 1.5Ueq(CH3) of the parent atom.
Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005).Fig. 1. The molecular structure of (I), with the atom-numbering scheme and 50% probability displacement ellipsoids. | |
Fig. 2. Packing diagram for (I) with hydrogen bonds drawn as dashed lines. |
C20H25N3O3S2 | F(000) = 1776 |
Mr = 419.55 | Dx = 1.372 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 12748 reflections |
a = 13.062 (2) Å | θ = 1.7–28.0° |
b = 15.710 (3) Å | µ = 0.29 mm−1 |
c = 19.798 (3) Å | T = 113 K |
V = 4062.8 (11) Å3 | Prism, colorless |
Z = 8 | 0.24 × 0.20 × 0.18 mm |
Rigaku Saturn CCD area-detector diffractometer | 4844 independent reflections |
Radiation source: rotating anode | 4463 reflections with I > 2σ(I) |
Multilayer monochromator | Rint = 0.054 |
Detector resolution: 14.63 pixels mm-1 | θmax = 27.9°, θmin = 2.1° |
ω and ϕ scans | h = −17→17 |
Absorption correction: multi-scan CrystalClear | k = −20→20 |
Tmin = 0.934, Tmax = 0.950 | l = −26→25 |
49454 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0665P)2 + 2.3859P] where P = (Fo2 + 2Fc2)/3 |
4844 reflections | (Δ/σ)max = 0.002 |
254 parameters | Δρmax = 1.17 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
C20H25N3O3S2 | V = 4062.8 (11) Å3 |
Mr = 419.55 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 13.062 (2) Å | µ = 0.29 mm−1 |
b = 15.710 (3) Å | T = 113 K |
c = 19.798 (3) Å | 0.24 × 0.20 × 0.18 mm |
Rigaku Saturn CCD area-detector diffractometer | 4844 independent reflections |
Absorption correction: multi-scan CrystalClear | 4463 reflections with I > 2σ(I) |
Tmin = 0.934, Tmax = 0.950 | Rint = 0.054 |
49454 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | 0 restraints |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.14 | Δρmax = 1.17 e Å−3 |
4844 reflections | Δρmin = −0.34 e Å−3 |
254 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | −0.12585 (4) | 0.69571 (4) | 0.50761 (3) | 0.03055 (16) | |
S2 | 0.51658 (4) | 1.09372 (3) | 0.30610 (3) | 0.03065 (16) | |
O1 | 0.13122 (12) | 1.01184 (10) | 0.57588 (8) | 0.0348 (4) | |
O2 | 0.58272 (13) | 1.14367 (10) | 0.34791 (9) | 0.0400 (4) | |
O3 | 0.48630 (14) | 1.12484 (11) | 0.24122 (9) | 0.0420 (4) | |
N1 | 0.12333 (13) | 0.89002 (11) | 0.51535 (9) | 0.0273 (4) | |
N2 | 0.23688 (12) | 1.01546 (10) | 0.41984 (8) | 0.0244 (4) | |
N3 | 0.41057 (13) | 1.07905 (11) | 0.34905 (9) | 0.0271 (4) | |
C1 | −0.11495 (17) | 0.69019 (14) | 0.59285 (13) | 0.0329 (5) | |
H1 | −0.1601 | 0.6579 | 0.6204 | 0.039* | |
C2 | −0.03617 (16) | 0.73600 (13) | 0.61798 (11) | 0.0293 (4) | |
H2 | −0.0186 | 0.7390 | 0.6645 | 0.035* | |
C3 | 0.01696 (15) | 0.77916 (12) | 0.56530 (10) | 0.0240 (4) | |
C4 | 0.10712 (17) | 0.83828 (14) | 0.57598 (11) | 0.0306 (5) | |
H4A | 0.0937 | 0.8758 | 0.6152 | 0.037* | |
H4B | 0.1694 | 0.8045 | 0.5857 | 0.037* | |
C5 | 0.11965 (16) | 0.84157 (14) | 0.45193 (11) | 0.0278 (4) | |
H5A | 0.1705 | 0.7949 | 0.4538 | 0.033* | |
H5B | 0.1384 | 0.8795 | 0.4139 | 0.033* | |
C6 | 0.01385 (16) | 0.80409 (14) | 0.43904 (10) | 0.0277 (4) | |
H6A | −0.0342 | 0.8495 | 0.4249 | 0.033* | |
H6B | 0.0174 | 0.7610 | 0.4026 | 0.033* | |
C7 | −0.02224 (15) | 0.76393 (13) | 0.50316 (11) | 0.0252 (4) | |
C8 | 0.13226 (14) | 0.97516 (13) | 0.52092 (11) | 0.0266 (4) | |
C9 | 0.13997 (15) | 1.02709 (14) | 0.45566 (12) | 0.0302 (5) | |
H9A | 0.0831 | 1.0106 | 0.4253 | 0.036* | |
H9B | 0.1316 | 1.0882 | 0.4667 | 0.036* | |
C10 | 0.32177 (15) | 1.05628 (13) | 0.45626 (11) | 0.0260 (4) | |
H10A | 0.3281 | 1.0309 | 0.5018 | 0.031* | |
H10B | 0.3072 | 1.1177 | 0.4617 | 0.031* | |
C11 | 0.42175 (15) | 1.04500 (14) | 0.41822 (10) | 0.0264 (4) | |
H11A | 0.4774 | 1.0755 | 0.4420 | 0.032* | |
H11B | 0.4399 | 0.9839 | 0.4163 | 0.032* | |
C12 | 0.32501 (17) | 1.03841 (14) | 0.31276 (11) | 0.0306 (5) | |
H12A | 0.3378 | 0.9766 | 0.3081 | 0.037* | |
H12B | 0.3183 | 1.0632 | 0.2670 | 0.037* | |
C13 | 0.22808 (17) | 1.05332 (15) | 0.35261 (11) | 0.0321 (5) | |
H13A | 0.2155 | 1.1152 | 0.3568 | 0.039* | |
H13B | 0.1693 | 1.0278 | 0.3285 | 0.039* | |
C14 | 0.57571 (17) | 0.99377 (13) | 0.29458 (10) | 0.0273 (4) | |
C15 | 0.66141 (17) | 0.97308 (14) | 0.33228 (11) | 0.0305 (5) | |
H15 | 0.6860 | 1.0112 | 0.3658 | 0.037* | |
C16 | 0.71122 (18) | 0.89631 (15) | 0.32094 (12) | 0.0344 (5) | |
H16 | 0.7705 | 0.8825 | 0.3465 | 0.041* | |
C17 | 0.67544 (18) | 0.83934 (14) | 0.27257 (11) | 0.0335 (5) | |
C18 | 0.58779 (19) | 0.86056 (14) | 0.23633 (11) | 0.0334 (5) | |
H18 | 0.5617 | 0.8215 | 0.2040 | 0.040* | |
C19 | 0.53773 (18) | 0.93727 (14) | 0.24632 (11) | 0.0304 (5) | |
H19 | 0.4785 | 0.9512 | 0.2207 | 0.037* | |
C20 | 0.7307 (2) | 0.75663 (16) | 0.25933 (14) | 0.0474 (6) | |
H20A | 0.7981 | 0.7581 | 0.2810 | 0.071* | |
H20B | 0.7392 | 0.7488 | 0.2105 | 0.071* | |
H20C | 0.6907 | 0.7093 | 0.2778 | 0.071* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0261 (3) | 0.0310 (3) | 0.0345 (3) | −0.0073 (2) | 0.0029 (2) | −0.0032 (2) |
S2 | 0.0320 (3) | 0.0252 (3) | 0.0348 (3) | −0.0070 (2) | 0.0075 (2) | −0.0003 (2) |
O1 | 0.0353 (9) | 0.0313 (8) | 0.0377 (9) | −0.0053 (7) | −0.0024 (7) | −0.0032 (7) |
O2 | 0.0348 (9) | 0.0328 (8) | 0.0523 (10) | −0.0150 (7) | 0.0129 (7) | −0.0125 (7) |
O3 | 0.0482 (10) | 0.0385 (9) | 0.0391 (9) | −0.0008 (8) | 0.0106 (8) | 0.0138 (8) |
N1 | 0.0287 (9) | 0.0259 (9) | 0.0274 (9) | −0.0068 (7) | 0.0013 (7) | 0.0031 (7) |
N2 | 0.0197 (8) | 0.0239 (8) | 0.0295 (9) | −0.0049 (6) | −0.0029 (6) | 0.0043 (7) |
N3 | 0.0251 (9) | 0.0267 (9) | 0.0296 (9) | −0.0061 (7) | 0.0007 (7) | 0.0000 (7) |
C1 | 0.0266 (11) | 0.0255 (10) | 0.0466 (13) | 0.0001 (8) | 0.0003 (9) | −0.0044 (9) |
C2 | 0.0326 (11) | 0.0271 (10) | 0.0281 (11) | 0.0028 (9) | 0.0004 (8) | 0.0047 (8) |
C3 | 0.0261 (10) | 0.0202 (9) | 0.0258 (10) | 0.0021 (7) | 0.0017 (8) | 0.0020 (7) |
C4 | 0.0348 (11) | 0.0304 (11) | 0.0266 (11) | −0.0048 (9) | −0.0019 (8) | 0.0035 (9) |
C5 | 0.0266 (10) | 0.0281 (10) | 0.0287 (11) | −0.0057 (8) | 0.0007 (8) | 0.0012 (8) |
C6 | 0.0290 (10) | 0.0304 (11) | 0.0238 (10) | −0.0041 (8) | 0.0012 (8) | −0.0015 (8) |
C7 | 0.0246 (10) | 0.0219 (9) | 0.0290 (10) | 0.0001 (8) | 0.0009 (8) | −0.0023 (8) |
C8 | 0.0159 (9) | 0.0266 (10) | 0.0372 (12) | −0.0027 (7) | −0.0010 (8) | 0.0012 (9) |
C9 | 0.0197 (9) | 0.0280 (10) | 0.0428 (13) | −0.0018 (8) | −0.0005 (8) | 0.0067 (9) |
C10 | 0.0225 (9) | 0.0252 (9) | 0.0302 (10) | −0.0060 (8) | −0.0009 (8) | −0.0014 (8) |
C11 | 0.0219 (9) | 0.0288 (10) | 0.0286 (10) | −0.0053 (8) | −0.0025 (8) | −0.0017 (8) |
C12 | 0.0328 (11) | 0.0309 (11) | 0.0282 (11) | −0.0097 (9) | −0.0051 (8) | 0.0040 (8) |
C13 | 0.0269 (10) | 0.0340 (11) | 0.0356 (12) | −0.0071 (9) | −0.0075 (9) | 0.0110 (9) |
C14 | 0.0315 (11) | 0.0273 (10) | 0.0231 (10) | −0.0076 (8) | 0.0059 (8) | −0.0021 (8) |
C15 | 0.0307 (11) | 0.0356 (11) | 0.0251 (10) | −0.0085 (9) | 0.0022 (8) | −0.0038 (9) |
C16 | 0.0311 (11) | 0.0380 (12) | 0.0342 (12) | −0.0022 (9) | 0.0022 (9) | 0.0020 (9) |
C17 | 0.0385 (12) | 0.0306 (11) | 0.0316 (11) | −0.0045 (9) | 0.0118 (9) | 0.0007 (9) |
C18 | 0.0467 (13) | 0.0304 (11) | 0.0230 (10) | −0.0113 (10) | 0.0065 (9) | −0.0045 (8) |
C19 | 0.0355 (11) | 0.0332 (11) | 0.0225 (10) | −0.0075 (9) | −0.0003 (8) | 0.0002 (8) |
C20 | 0.0517 (16) | 0.0343 (12) | 0.0561 (16) | 0.0025 (11) | 0.0162 (13) | −0.0035 (12) |
S1—C1 | 1.696 (3) | C6—H6B | 0.9900 |
S1—C7 | 1.729 (2) | C8—C9 | 1.531 (3) |
S2—O3 | 1.4302 (18) | C9—H9A | 0.9900 |
S2—O2 | 1.4309 (17) | C9—H9B | 0.9900 |
S2—N3 | 1.6412 (18) | C10—C11 | 1.518 (3) |
S2—C14 | 1.765 (2) | C10—H10A | 0.9900 |
O1—C8 | 1.231 (3) | C10—H10B | 0.9900 |
N1—C8 | 1.347 (3) | C11—H11A | 0.9900 |
N1—C4 | 1.465 (3) | C11—H11B | 0.9900 |
N1—C5 | 1.469 (3) | C12—C13 | 1.510 (3) |
N2—C9 | 1.462 (3) | C12—H12A | 0.9900 |
N2—C13 | 1.463 (3) | C12—H12B | 0.9900 |
N2—C10 | 1.470 (2) | C13—H13A | 0.9900 |
N3—C12 | 1.474 (3) | C13—H13B | 0.9900 |
N3—C11 | 1.478 (3) | C14—C15 | 1.384 (3) |
C1—C2 | 1.351 (3) | C14—C19 | 1.395 (3) |
C1—H1 | 0.9500 | C15—C16 | 1.389 (3) |
C2—C3 | 1.424 (3) | C15—H15 | 0.9500 |
C2—H2 | 0.9500 | C16—C17 | 1.392 (3) |
C3—C7 | 1.354 (3) | C16—H16 | 0.9500 |
C3—C4 | 1.515 (3) | C17—C18 | 1.392 (3) |
C4—H4A | 0.9900 | C17—C20 | 1.510 (3) |
C4—H4B | 0.9900 | C18—C19 | 1.385 (3) |
C5—C6 | 1.524 (3) | C18—H18 | 0.9500 |
C5—H5A | 0.9900 | C19—H19 | 0.9500 |
C5—H5B | 0.9900 | C20—H20A | 0.9800 |
C6—C7 | 1.494 (3) | C20—H20B | 0.9800 |
C6—H6A | 0.9900 | C20—H20C | 0.9800 |
C1—S1—C7 | 90.96 (11) | N2—C9—H9B | 108.9 |
O3—S2—O2 | 119.94 (11) | C8—C9—H9B | 108.9 |
O3—S2—N3 | 106.26 (10) | H9A—C9—H9B | 107.7 |
O2—S2—N3 | 106.67 (9) | N2—C10—C11 | 110.78 (16) |
O3—S2—C14 | 108.00 (10) | N2—C10—H10A | 109.5 |
O2—S2—C14 | 107.37 (11) | C11—C10—H10A | 109.5 |
N3—S2—C14 | 108.14 (9) | N2—C10—H10B | 109.5 |
C8—N1—C4 | 119.75 (18) | C11—C10—H10B | 109.5 |
C8—N1—C5 | 125.96 (18) | H10A—C10—H10B | 108.1 |
C4—N1—C5 | 114.08 (17) | N3—C11—C10 | 109.42 (17) |
C9—N2—C13 | 108.82 (16) | N3—C11—H11A | 109.8 |
C9—N2—C10 | 111.13 (16) | C10—C11—H11A | 109.8 |
C13—N2—C10 | 109.16 (15) | N3—C11—H11B | 109.8 |
C12—N3—C11 | 111.71 (16) | C10—C11—H11B | 109.8 |
C12—N3—S2 | 116.61 (14) | H11A—C11—H11B | 108.2 |
C11—N3—S2 | 116.59 (14) | N3—C12—C13 | 108.29 (18) |
C2—C1—S1 | 113.78 (18) | N3—C12—H12A | 110.0 |
C2—C1—H1 | 123.1 | C13—C12—H12A | 110.0 |
S1—C1—H1 | 123.1 | N3—C12—H12B | 110.0 |
C1—C2—C3 | 110.8 (2) | C13—C12—H12B | 110.0 |
C1—C2—H2 | 124.6 | H12A—C12—H12B | 108.4 |
C3—C2—H2 | 124.6 | N2—C13—C12 | 110.27 (17) |
C7—C3—C2 | 113.39 (19) | N2—C13—H13A | 109.6 |
C7—C3—C4 | 121.96 (18) | C12—C13—H13A | 109.6 |
C2—C3—C4 | 124.64 (18) | N2—C13—H13B | 109.6 |
N1—C4—C3 | 109.76 (17) | C12—C13—H13B | 109.6 |
N1—C4—H4A | 109.7 | H13A—C13—H13B | 108.1 |
C3—C4—H4A | 109.7 | C15—C14—C19 | 120.5 (2) |
N1—C4—H4B | 109.7 | C15—C14—S2 | 119.55 (16) |
C3—C4—H4B | 109.7 | C19—C14—S2 | 119.93 (18) |
H4A—C4—H4B | 108.2 | C14—C15—C16 | 119.7 (2) |
N1—C5—C6 | 111.90 (17) | C14—C15—H15 | 120.1 |
N1—C5—H5A | 109.2 | C16—C15—H15 | 120.1 |
C6—C5—H5A | 109.2 | C15—C16—C17 | 120.8 (2) |
N1—C5—H5B | 109.2 | C15—C16—H16 | 119.6 |
C6—C5—H5B | 109.2 | C17—C16—H16 | 119.6 |
H5A—C5—H5B | 107.9 | C16—C17—C18 | 118.5 (2) |
C7—C6—C5 | 107.88 (17) | C16—C17—C20 | 120.8 (2) |
C7—C6—H6A | 110.1 | C18—C17—C20 | 120.7 (2) |
C5—C6—H6A | 110.1 | C19—C18—C17 | 121.5 (2) |
C7—C6—H6B | 110.1 | C19—C18—H18 | 119.2 |
C5—C6—H6B | 110.1 | C17—C18—H18 | 119.2 |
H6A—C6—H6B | 108.4 | C18—C19—C14 | 118.9 (2) |
C3—C7—C6 | 125.32 (19) | C18—C19—H19 | 120.5 |
C3—C7—S1 | 111.06 (16) | C14—C19—H19 | 120.5 |
C6—C7—S1 | 123.52 (15) | C17—C20—H20A | 109.5 |
O1—C8—N1 | 122.4 (2) | C17—C20—H20B | 109.5 |
O1—C8—C9 | 119.81 (19) | H20A—C20—H20B | 109.5 |
N1—C8—C9 | 117.75 (19) | C17—C20—H20C | 109.5 |
N2—C9—C8 | 113.56 (17) | H20A—C20—H20C | 109.5 |
N2—C9—H9A | 108.9 | H20B—C20—H20C | 109.5 |
C8—C9—H9A | 108.9 | ||
O3—S2—N3—C12 | 43.28 (18) | C10—N2—C9—C8 | −71.2 (2) |
O2—S2—N3—C12 | 172.33 (16) | O1—C8—C9—N2 | 112.0 (2) |
C14—S2—N3—C12 | −72.46 (17) | N1—C8—C9—N2 | −70.2 (2) |
O3—S2—N3—C11 | 178.81 (15) | C9—N2—C10—C11 | −179.18 (16) |
O2—S2—N3—C11 | −52.14 (17) | C13—N2—C10—C11 | −59.1 (2) |
C14—S2—N3—C11 | 63.07 (16) | C12—N3—C11—C10 | −56.6 (2) |
C7—S1—C1—C2 | −1.04 (18) | S2—N3—C11—C10 | 165.84 (13) |
S1—C1—C2—C3 | 1.2 (2) | N2—C10—C11—N3 | 56.3 (2) |
C1—C2—C3—C7 | −0.7 (3) | C11—N3—C12—C13 | 58.5 (2) |
C1—C2—C3—C4 | 178.0 (2) | S2—N3—C12—C13 | −163.93 (14) |
C8—N1—C4—C3 | 129.51 (19) | C9—N2—C13—C12 | −177.01 (17) |
C5—N1—C4—C3 | −45.7 (2) | C10—N2—C13—C12 | 61.5 (2) |
C7—C3—C4—N1 | 15.1 (3) | N3—C12—C13—N2 | −60.7 (2) |
C2—C3—C4—N1 | −163.44 (19) | O3—S2—C14—C15 | 140.22 (17) |
C8—N1—C5—C6 | −110.0 (2) | O2—S2—C14—C15 | 9.6 (2) |
C4—N1—C5—C6 | 64.8 (2) | N3—S2—C14—C15 | −105.18 (18) |
N1—C5—C6—C7 | −46.2 (2) | O3—S2—C14—C19 | −37.9 (2) |
C2—C3—C7—C6 | 176.41 (19) | O2—S2—C14—C19 | −168.58 (16) |
C4—C3—C7—C6 | −2.3 (3) | N3—S2—C14—C19 | 76.67 (18) |
C2—C3—C7—S1 | −0.1 (2) | C19—C14—C15—C16 | 1.4 (3) |
C4—C3—C7—S1 | −178.81 (16) | S2—C14—C15—C16 | −176.74 (16) |
C5—C6—C7—C3 | 17.4 (3) | C14—C15—C16—C17 | −0.7 (3) |
C5—C6—C7—S1 | −166.53 (15) | C15—C16—C17—C18 | −0.8 (3) |
C1—S1—C7—C3 | 0.62 (17) | C15—C16—C17—C20 | 178.8 (2) |
C1—S1—C7—C6 | −175.95 (18) | C16—C17—C18—C19 | 1.6 (3) |
C4—N1—C8—O1 | 2.8 (3) | C20—C17—C18—C19 | −178.0 (2) |
C5—N1—C8—O1 | 177.38 (19) | C17—C18—C19—C14 | −0.9 (3) |
C4—N1—C8—C9 | −174.92 (17) | C15—C14—C19—C18 | −0.6 (3) |
C5—N1—C8—C9 | −0.4 (3) | S2—C14—C19—C18 | 177.51 (16) |
C13—N2—C9—C8 | 168.59 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5A···S1i | 0.99 | 2.77 | 3.469 (2) | 128 |
C6—H6A···O1ii | 0.99 | 2.52 | 3.470 (3) | 161 |
C6—H6B···O2iii | 0.99 | 2.51 | 3.346 (3) | 143 |
Symmetry codes: (i) x+1/2, −y+3/2, −z+1; (ii) −x, −y+2, −z+1; (iii) −x+1/2, y−1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C20H25N3O3S2 |
Mr | 419.55 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 113 |
a, b, c (Å) | 13.062 (2), 15.710 (3), 19.798 (3) |
V (Å3) | 4062.8 (11) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.24 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Rigaku Saturn CCD area-detector diffractometer |
Absorption correction | Multi-scan CrystalClear |
Tmin, Tmax | 0.934, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 49454, 4844, 4463 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.143, 1.14 |
No. of reflections | 4844 |
No. of parameters | 254 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.17, −0.34 |
Computer programs: CrystalClear (Rigaku/MSC, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), CrystalStructure (Rigaku/MSC, 2005).
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5A···S1i | 0.99 | 2.77 | 3.469 (2) | 128.0 |
C6—H6A···O1ii | 0.99 | 2.52 | 3.470 (3) | 160.5 |
C6—H6B···O2iii | 0.99 | 2.51 | 3.346 (3) | 142.5 |
Symmetry codes: (i) x+1/2, −y+3/2, −z+1; (ii) −x, −y+2, −z+1; (iii) −x+1/2, y−1/2, z. |
Acknowledgements
The authors thank Mr Hai-Bin Song of Nankai University for the X-ray crystallographic determinations and helpful suggestions.
References
Cattaneo, M. (2009). J. Thromb. Haemost. 7, Suppl. 1, 262–265. Google Scholar
Liu, D. K., Liu, Y., Liu, M., Zhang, S. J., Cheng, D., Jin, L. Y., Xu, W. R. & Liu, C. X. (2008). CN Patent 101284838A. Google Scholar
Rigaku/MSC (2005). CrystalClear and CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wallentin, L. (2009). Eur. Heart J. 30, 1964–1977. Web of Science CrossRef PubMed CAS Google Scholar
Zhi, S., Mu, S., Liu, Y. & Liu, D.-K. (2011). Acta Cryst. E67, o1490. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a thienopyridine derivative, the title compound(I) can be used as an irreversible P2Y12 antagonist to inhibit ADP, which induces platelet aggregation and decreases the risk of arterial occlusion. (Cattaneo 2009; Wallentin 2009).
The piperazine ring exhibits a chair conformation and the tetrahydropyridine ring exhibits a half chair conformation (Fig. 1). The folded conformation of the molecule is defined by the N1—C8—C9—N2 torsion angle of -70.20 (2) °. The dihedral angles formed between the tetrahydropyridine plane and the phenyl ring and the C10—C11—C12—C13 plane are 85.47 (6) ° and 56.38 (9) °, respectively. The crystal is stabilized by intermolecular C—H···S and C—H···O hydrogen bonds (Table1, Fig.2).