organic compounds
2,13-Dibenzyl-5,16-diethyl-2,6,13,17-tetraazatricyclo[16.4.0.07,12]docosan-2-ium nitrate
aDepartment of Chemistry, Andong National University, Andong 760-749, Republic of Korea, bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and cChemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: edward.tiekink@gmail.com
One of the tertiary amine atoms has been protonated in the title salt, C36H57N4+·NO3−. The four N atoms of the macrocycle are almost coplanar (r.m.s. deviation = 0.0053 Å), a result correlated with the formation of intramolecular N—H⋯N and N—H⋯(N,N) hydrogen bonds. With respect to this plane, the benzyl groups lie to either side; a similar arrangement pertains for the cyclohexyl rings (each with a chair conformation). Helical supramolecular chains are evident in the crystal, whereby alternating cations and anions are linked by C—H⋯O interactions. The chains are consolidated into supramolecular arrays in the ab plane via C—H⋯π contacts involving both benzene rings.
Related literature
For the synthesis of the precursor macrocycle, see: Lim et al. (2006); For related structures, see: Choi et al. (2006, 2010a,b).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811029692/hb6328sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811029692/hb6328Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811029692/hb6328Isup3.cml
The macrocycle, 5,16-diethyl-2,6,13,17-tetraazatricyclo[14.4.01,18.07,12]docosane, was prepared according to a published procedure (Lim et al., 2006). To a solution of this macrocycle (0.61 g, 2.0 mmol) in methanol (10 ml) was added benzyl bromide (0.68 g, 4.0 mmol) and a solution containing sodium carbonate (0.42 g, 4.0 mmol) in water (5 ml). The mixture was refluxed for 24 h. The solution was cooled, the white solid collected and washed with water. The title di-benzyl substituted macrocyclic nitrate was the unexpected colourless by-product that was obtained when copper nitrate trihydrate (0.06 g, 0.25 mmol) and the dibenzyl-substituted macrocycle (0.16 g, 0.29 mmol) was reacted in THF (10 ml). The compound was recrystallized from acetonitrile-water (1:1) in the form of colourless prisms.
Carbon-bound H-atoms were placed in calculated positions [C—H 0.95 to 0.98 Å, Uiso(H) 1.2 to 1.5Ueq(C)] and were included in the
in the riding model approximation. The amino H-atoms were located in a difference Fourier map, and were refined with a distance restraint of N–H 0.88±0.01 Å; their Uiso values were refined.Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Molecular structures of the ions in (I) showing displacement ellipsoids at the 50% probability level. | |
Fig. 2. Helical supramolecular chain aligned along the b-axis in (I) mediated by C—H···O interactions shown as orange dashed lines. Intramolecular N—H···N hydrogen bonds are shown as blue dashed lines. | |
Fig. 3. A view of the crystal packing of (I) in projection down the a-axis. The C—H···O and C—H···π interactions shown as orange and purple dashed lines, respectively. |
C36H57N4+·NO3− | F(000) = 1328 |
Mr = 607.87 | Dx = 1.217 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54184 Å |
Hall symbol: -P 2yn | Cell parameters from 15422 reflections |
a = 10.7882 (1) Å | θ = 2.7–74.2° |
b = 16.2785 (1) Å | µ = 0.61 mm−1 |
c = 19.0962 (1) Å | T = 100 K |
β = 98.2461 (6)° | Prism, colorless |
V = 3318.92 (4) Å3 | 0.30 × 0.20 × 0.10 mm |
Z = 4 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 6689 independent reflections |
Radiation source: SuperNova (Cu) X-ray Source | 6289 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.040 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 74.4°, θmin = 3.6° |
ω scans | h = −13→13 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −20→20 |
Tmin = 0.839, Tmax = 0.942 | l = −23→23 |
24730 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.120 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0639P)2 + 0.9655P] where P = (Fo2 + 2Fc2)/3 |
6689 reflections | (Δ/σ)max = 0.001 |
409 parameters | Δρmax = 0.31 e Å−3 |
3 restraints | Δρmin = −0.25 e Å−3 |
C36H57N4+·NO3− | V = 3318.92 (4) Å3 |
Mr = 607.87 | Z = 4 |
Monoclinic, P21/n | Cu Kα radiation |
a = 10.7882 (1) Å | µ = 0.61 mm−1 |
b = 16.2785 (1) Å | T = 100 K |
c = 19.0962 (1) Å | 0.30 × 0.20 × 0.10 mm |
β = 98.2461 (6)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 6689 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 6289 reflections with I > 2σ(I) |
Tmin = 0.839, Tmax = 0.942 | Rint = 0.040 |
24730 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 3 restraints |
wR(F2) = 0.120 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.31 e Å−3 |
6689 reflections | Δρmin = −0.25 e Å−3 |
409 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.50228 (8) | 0.10547 (5) | 0.24392 (5) | 0.0332 (2) | |
O2 | 0.56328 (8) | −0.01583 (6) | 0.28070 (5) | 0.0327 (2) | |
O3 | 0.39115 (8) | −0.00135 (5) | 0.20754 (4) | 0.02779 (19) | |
N1 | 0.43505 (7) | 0.37105 (5) | 0.22433 (4) | 0.01185 (17) | |
N2 | 0.57885 (7) | 0.45766 (5) | 0.32911 (4) | 0.01289 (18) | |
N3 | 0.56192 (7) | 0.62777 (5) | 0.27861 (4) | 0.01193 (17) | |
N4 | 0.41868 (7) | 0.53381 (5) | 0.17396 (4) | 0.01209 (17) | |
N5 | 0.48585 (8) | 0.02911 (6) | 0.24405 (5) | 0.0209 (2) | |
C1 | 0.52521 (9) | 0.30042 (6) | 0.22417 (5) | 0.0158 (2) | |
H1A | 0.4785 | 0.2479 | 0.2221 | 0.019* | |
H1B | 0.5853 | 0.3011 | 0.2685 | 0.019* | |
C2 | 0.59572 (9) | 0.30616 (6) | 0.16165 (5) | 0.0148 (2) | |
C3 | 0.69049 (9) | 0.36427 (6) | 0.16127 (5) | 0.0176 (2) | |
H3A | 0.7107 | 0.4000 | 0.2006 | 0.021* | |
C4 | 0.75561 (10) | 0.37032 (7) | 0.10379 (6) | 0.0207 (2) | |
H4A | 0.8200 | 0.4101 | 0.1037 | 0.025* | |
C5 | 0.72593 (10) | 0.31770 (7) | 0.04624 (5) | 0.0212 (2) | |
H5 | 0.7700 | 0.3218 | 0.0067 | 0.025* | |
C6 | 0.63240 (10) | 0.25951 (7) | 0.04648 (5) | 0.0205 (2) | |
H6 | 0.6127 | 0.2236 | 0.0072 | 0.025* | |
C7 | 0.56721 (9) | 0.25352 (7) | 0.10399 (5) | 0.0175 (2) | |
H7 | 0.5031 | 0.2135 | 0.1040 | 0.021* | |
C8 | 0.33318 (9) | 0.36493 (6) | 0.16142 (5) | 0.0138 (2) | |
H8A | 0.2848 | 0.3140 | 0.1659 | 0.017* | |
H8B | 0.3729 | 0.3601 | 0.1180 | 0.017* | |
C9 | 0.24291 (9) | 0.43716 (6) | 0.15289 (5) | 0.0135 (2) | |
H9A | 0.2132 | 0.4475 | 0.1988 | 0.016* | |
H9B | 0.1691 | 0.4220 | 0.1183 | 0.016* | |
C10 | 0.29874 (9) | 0.51689 (6) | 0.12824 (5) | 0.0129 (2) | |
H10 | 0.3172 | 0.5080 | 0.0790 | 0.015* | |
C11 | 0.20492 (9) | 0.58771 (6) | 0.12639 (5) | 0.0171 (2) | |
H11A | 0.1853 | 0.5968 | 0.1749 | 0.020* | |
H11B | 0.2448 | 0.6383 | 0.1116 | 0.020* | |
C12 | 0.08247 (10) | 0.57368 (8) | 0.07684 (6) | 0.0254 (3) | |
H12A | 0.0277 | 0.6215 | 0.0785 | 0.038* | |
H12B | 0.0407 | 0.5246 | 0.0919 | 0.038* | |
H12C | 0.1004 | 0.5660 | 0.0284 | 0.038* | |
C13 | 0.49956 (9) | 0.59796 (6) | 0.14997 (5) | 0.0125 (2) | |
H13 | 0.4500 | 0.6496 | 0.1400 | 0.015* | |
C14 | 0.55226 (9) | 0.57130 (6) | 0.08313 (5) | 0.0162 (2) | |
H14A | 0.4824 | 0.5636 | 0.0440 | 0.019* | |
H14B | 0.5959 | 0.5180 | 0.0919 | 0.019* | |
C15 | 0.64389 (10) | 0.63526 (7) | 0.06136 (5) | 0.0192 (2) | |
H15A | 0.6804 | 0.6146 | 0.0201 | 0.023* | |
H15B | 0.5979 | 0.6866 | 0.0471 | 0.023* | |
C16 | 0.74889 (9) | 0.65372 (7) | 0.12163 (5) | 0.0184 (2) | |
H16A | 0.8027 | 0.6979 | 0.1070 | 0.022* | |
H16B | 0.8013 | 0.6041 | 0.1322 | 0.022* | |
C17 | 0.69583 (9) | 0.68032 (6) | 0.18819 (5) | 0.0163 (2) | |
H17A | 0.6492 | 0.7325 | 0.1789 | 0.020* | |
H17B | 0.7653 | 0.6898 | 0.2272 | 0.020* | |
C18 | 0.60803 (9) | 0.61374 (6) | 0.21000 (5) | 0.0120 (2) | |
H18 | 0.6581 | 0.5619 | 0.2156 | 0.014* | |
C19 | 0.48660 (9) | 0.70312 (6) | 0.27985 (5) | 0.0147 (2) | |
H19A | 0.4286 | 0.7079 | 0.2349 | 0.018* | |
H19B | 0.5426 | 0.7516 | 0.2841 | 0.018* | |
C20 | 0.41211 (9) | 0.70173 (6) | 0.34134 (5) | 0.0145 (2) | |
C21 | 0.44026 (9) | 0.75553 (6) | 0.39824 (5) | 0.0171 (2) | |
H21 | 0.5065 | 0.7940 | 0.3984 | 0.020* | |
C22 | 0.37204 (10) | 0.75333 (7) | 0.45488 (5) | 0.0196 (2) | |
H22 | 0.3917 | 0.7904 | 0.4933 | 0.023* | |
C23 | 0.27563 (10) | 0.69726 (7) | 0.45545 (5) | 0.0196 (2) | |
H23 | 0.2296 | 0.6956 | 0.4943 | 0.024* | |
C24 | 0.24625 (10) | 0.64323 (7) | 0.39889 (6) | 0.0197 (2) | |
H24 | 0.1801 | 0.6047 | 0.3990 | 0.024* | |
C25 | 0.31418 (9) | 0.64595 (7) | 0.34239 (5) | 0.0172 (2) | |
H25 | 0.2936 | 0.6092 | 0.3038 | 0.021* | |
C26 | 0.66397 (9) | 0.63019 (6) | 0.33960 (5) | 0.0141 (2) | |
H26A | 0.6256 | 0.6364 | 0.3834 | 0.017* | |
H26B | 0.7152 | 0.6798 | 0.3350 | 0.017* | |
C27 | 0.75144 (9) | 0.55589 (6) | 0.34862 (5) | 0.0141 (2) | |
H27A | 0.8269 | 0.5709 | 0.3820 | 0.017* | |
H27B | 0.7789 | 0.5439 | 0.3024 | 0.017* | |
C28 | 0.69645 (9) | 0.47719 (6) | 0.37546 (5) | 0.0137 (2) | |
H28 | 0.6780 | 0.4864 | 0.4247 | 0.016* | |
C29 | 0.78903 (9) | 0.40598 (7) | 0.37584 (5) | 0.0182 (2) | |
H29A | 0.7483 | 0.3551 | 0.3895 | 0.022* | |
H29B | 0.8088 | 0.3982 | 0.3272 | 0.022* | |
C30 | 0.91137 (10) | 0.41840 (8) | 0.42597 (6) | 0.0260 (3) | |
H30A | 0.9657 | 0.3706 | 0.4235 | 0.039* | |
H30B | 0.8931 | 0.4248 | 0.4745 | 0.039* | |
H30C | 0.9537 | 0.4678 | 0.4121 | 0.039* | |
C31 | 0.49519 (9) | 0.39720 (6) | 0.35440 (5) | 0.0128 (2) | |
H31 | 0.5424 | 0.3446 | 0.3638 | 0.015* | |
C32 | 0.43876 (9) | 0.42032 (7) | 0.42130 (5) | 0.0171 (2) | |
H32A | 0.5070 | 0.4289 | 0.4611 | 0.021* | |
H32B | 0.3916 | 0.4724 | 0.4131 | 0.021* | |
C33 | 0.35099 (10) | 0.35262 (7) | 0.44074 (5) | 0.0196 (2) | |
H33A | 0.4000 | 0.3021 | 0.4536 | 0.023* | |
H33B | 0.3128 | 0.3701 | 0.4825 | 0.023* | |
C34 | 0.24755 (9) | 0.33400 (7) | 0.37957 (5) | 0.0179 (2) | |
H34A | 0.1921 | 0.3824 | 0.3707 | 0.021* | |
H34B | 0.1965 | 0.2874 | 0.3927 | 0.021* | |
C35 | 0.30172 (9) | 0.31249 (6) | 0.31183 (5) | 0.0169 (2) | |
H35A | 0.3502 | 0.2608 | 0.3187 | 0.020* | |
H35B | 0.2329 | 0.3045 | 0.2722 | 0.020* | |
C36 | 0.38655 (9) | 0.38224 (6) | 0.29457 (5) | 0.0123 (2) | |
H36 | 0.3345 | 0.4333 | 0.2903 | 0.015* | |
H1 | 0.4755 (12) | 0.4183 (6) | 0.2191 (7) | 0.030 (4)* | |
H2 | 0.5374 (12) | 0.5033 (6) | 0.3183 (7) | 0.029 (4)* | |
H4 | 0.4029 (12) | 0.5486 (8) | 0.2162 (5) | 0.023 (3)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0302 (4) | 0.0194 (4) | 0.0498 (5) | −0.0036 (3) | 0.0049 (4) | 0.0009 (4) |
O2 | 0.0298 (5) | 0.0338 (5) | 0.0338 (5) | 0.0102 (4) | 0.0020 (4) | 0.0097 (4) |
O3 | 0.0268 (4) | 0.0291 (4) | 0.0266 (4) | −0.0065 (3) | 0.0007 (3) | −0.0020 (3) |
N1 | 0.0122 (4) | 0.0118 (4) | 0.0116 (4) | 0.0002 (3) | 0.0018 (3) | −0.0005 (3) |
N2 | 0.0117 (4) | 0.0136 (4) | 0.0129 (4) | −0.0015 (3) | 0.0001 (3) | 0.0025 (3) |
N3 | 0.0116 (4) | 0.0130 (4) | 0.0110 (4) | 0.0007 (3) | 0.0010 (3) | −0.0007 (3) |
N4 | 0.0119 (4) | 0.0143 (4) | 0.0099 (4) | −0.0016 (3) | 0.0010 (3) | 0.0004 (3) |
N5 | 0.0194 (4) | 0.0223 (5) | 0.0225 (4) | 0.0007 (3) | 0.0078 (3) | 0.0010 (3) |
C1 | 0.0175 (5) | 0.0145 (5) | 0.0156 (5) | 0.0049 (4) | 0.0037 (4) | 0.0013 (4) |
C2 | 0.0135 (4) | 0.0169 (5) | 0.0140 (4) | 0.0048 (4) | 0.0014 (3) | 0.0009 (4) |
C3 | 0.0174 (5) | 0.0174 (5) | 0.0176 (5) | 0.0029 (4) | 0.0013 (4) | −0.0021 (4) |
C4 | 0.0170 (5) | 0.0209 (5) | 0.0249 (5) | 0.0017 (4) | 0.0054 (4) | 0.0034 (4) |
C5 | 0.0194 (5) | 0.0294 (6) | 0.0158 (5) | 0.0079 (4) | 0.0059 (4) | 0.0038 (4) |
C6 | 0.0179 (5) | 0.0285 (6) | 0.0142 (5) | 0.0060 (4) | −0.0006 (4) | −0.0040 (4) |
C7 | 0.0132 (4) | 0.0206 (5) | 0.0180 (5) | 0.0031 (4) | 0.0005 (4) | −0.0026 (4) |
C8 | 0.0137 (4) | 0.0142 (5) | 0.0127 (4) | −0.0004 (4) | −0.0004 (3) | −0.0015 (3) |
C9 | 0.0118 (4) | 0.0142 (5) | 0.0142 (4) | −0.0002 (3) | 0.0003 (3) | 0.0001 (3) |
C10 | 0.0122 (4) | 0.0149 (5) | 0.0109 (4) | −0.0008 (4) | −0.0003 (3) | 0.0004 (3) |
C11 | 0.0149 (5) | 0.0163 (5) | 0.0193 (5) | 0.0017 (4) | 0.0005 (4) | 0.0029 (4) |
C12 | 0.0156 (5) | 0.0270 (6) | 0.0316 (6) | 0.0006 (4) | −0.0037 (4) | 0.0086 (5) |
C13 | 0.0125 (4) | 0.0125 (5) | 0.0124 (4) | −0.0008 (3) | 0.0017 (3) | 0.0013 (3) |
C14 | 0.0171 (5) | 0.0196 (5) | 0.0122 (4) | −0.0008 (4) | 0.0034 (4) | −0.0003 (4) |
C15 | 0.0193 (5) | 0.0249 (6) | 0.0145 (5) | −0.0019 (4) | 0.0059 (4) | 0.0031 (4) |
C16 | 0.0154 (5) | 0.0223 (5) | 0.0186 (5) | −0.0024 (4) | 0.0064 (4) | 0.0015 (4) |
C17 | 0.0149 (5) | 0.0173 (5) | 0.0172 (5) | −0.0039 (4) | 0.0044 (4) | −0.0002 (4) |
C18 | 0.0113 (4) | 0.0133 (5) | 0.0116 (4) | −0.0002 (3) | 0.0024 (3) | 0.0002 (3) |
C19 | 0.0156 (4) | 0.0136 (5) | 0.0150 (5) | 0.0020 (4) | 0.0030 (4) | 0.0006 (3) |
C20 | 0.0138 (4) | 0.0158 (5) | 0.0138 (4) | 0.0041 (4) | 0.0012 (3) | 0.0006 (4) |
C21 | 0.0133 (4) | 0.0195 (5) | 0.0178 (5) | 0.0018 (4) | 0.0001 (4) | −0.0022 (4) |
C22 | 0.0189 (5) | 0.0253 (6) | 0.0134 (5) | 0.0056 (4) | −0.0014 (4) | −0.0043 (4) |
C23 | 0.0194 (5) | 0.0258 (6) | 0.0145 (5) | 0.0067 (4) | 0.0052 (4) | 0.0035 (4) |
C24 | 0.0181 (5) | 0.0194 (5) | 0.0223 (5) | 0.0015 (4) | 0.0057 (4) | 0.0021 (4) |
C25 | 0.0171 (5) | 0.0176 (5) | 0.0172 (5) | 0.0014 (4) | 0.0028 (4) | −0.0020 (4) |
C26 | 0.0134 (4) | 0.0147 (5) | 0.0135 (4) | −0.0012 (4) | −0.0004 (4) | −0.0011 (3) |
C27 | 0.0115 (4) | 0.0159 (5) | 0.0145 (4) | −0.0012 (4) | −0.0001 (3) | 0.0009 (4) |
C28 | 0.0125 (4) | 0.0167 (5) | 0.0111 (4) | −0.0004 (4) | −0.0004 (3) | 0.0006 (3) |
C29 | 0.0163 (5) | 0.0186 (5) | 0.0191 (5) | 0.0024 (4) | 0.0004 (4) | 0.0033 (4) |
C30 | 0.0157 (5) | 0.0284 (6) | 0.0322 (6) | 0.0014 (4) | −0.0028 (4) | 0.0095 (5) |
C31 | 0.0130 (4) | 0.0134 (5) | 0.0120 (4) | −0.0008 (3) | 0.0018 (3) | 0.0009 (3) |
C32 | 0.0187 (5) | 0.0204 (5) | 0.0125 (4) | −0.0027 (4) | 0.0036 (4) | −0.0008 (4) |
C33 | 0.0206 (5) | 0.0249 (5) | 0.0141 (5) | −0.0022 (4) | 0.0056 (4) | 0.0031 (4) |
C34 | 0.0165 (5) | 0.0203 (5) | 0.0182 (5) | −0.0025 (4) | 0.0069 (4) | 0.0022 (4) |
C35 | 0.0171 (5) | 0.0173 (5) | 0.0168 (5) | −0.0052 (4) | 0.0046 (4) | −0.0011 (4) |
C36 | 0.0124 (4) | 0.0138 (5) | 0.0112 (4) | −0.0004 (3) | 0.0030 (3) | 0.0001 (3) |
O1—N5 | 1.2557 (13) | C15—H15B | 0.9900 |
O2—N5 | 1.2470 (13) | C16—C17 | 1.5297 (13) |
O3—N5 | 1.2536 (12) | C16—H16A | 0.9900 |
N1—C1 | 1.5063 (12) | C16—H16B | 0.9900 |
N1—C8 | 1.5107 (12) | C17—C18 | 1.5357 (13) |
N1—C36 | 1.5189 (11) | C17—H17A | 0.9900 |
N1—H1 | 0.896 (9) | C17—H17B | 0.9900 |
N2—C31 | 1.4634 (12) | C18—H18 | 1.0000 |
N2—C28 | 1.4737 (12) | C19—C20 | 1.5152 (13) |
N2—H2 | 0.877 (9) | C19—H19A | 0.9900 |
N3—C19 | 1.4734 (12) | C19—H19B | 0.9900 |
N3—C26 | 1.4840 (12) | C20—C21 | 1.3947 (14) |
N3—C18 | 1.4842 (11) | C20—C25 | 1.3954 (14) |
N4—C13 | 1.4753 (12) | C21—C22 | 1.3933 (14) |
N4—C10 | 1.4793 (11) | C21—H21 | 0.9500 |
N4—H4 | 0.881 (8) | C22—C23 | 1.3850 (16) |
C1—C2 | 1.5077 (13) | C22—H22 | 0.9500 |
C1—H1A | 0.9900 | C23—C24 | 1.3937 (15) |
C1—H1B | 0.9900 | C23—H23 | 0.9500 |
C2—C3 | 1.3935 (14) | C24—C25 | 1.3892 (14) |
C2—C7 | 1.3943 (14) | C24—H24 | 0.9500 |
C3—C4 | 1.3890 (14) | C25—H25 | 0.9500 |
C3—H3A | 0.9500 | C26—C27 | 1.5286 (13) |
C4—C5 | 1.3940 (16) | C26—H26A | 0.9900 |
C4—H4A | 0.9500 | C26—H26B | 0.9900 |
C5—C6 | 1.3844 (16) | C27—C28 | 1.5308 (13) |
C5—H5 | 0.9500 | C27—H27A | 0.9900 |
C6—C7 | 1.3898 (14) | C27—H27B | 0.9900 |
C6—H6 | 0.9500 | C28—C29 | 1.5295 (14) |
C7—H7 | 0.9500 | C28—H28 | 1.0000 |
C8—C9 | 1.5204 (13) | C29—C30 | 1.5287 (14) |
C8—H8A | 0.9900 | C29—H29A | 0.9900 |
C8—H8B | 0.9900 | C29—H29B | 0.9900 |
C9—C10 | 1.5331 (13) | C30—H30A | 0.9800 |
C9—H9A | 0.9900 | C30—H30B | 0.9800 |
C9—H9B | 0.9900 | C30—H30C | 0.9800 |
C10—C11 | 1.5312 (13) | C31—C36 | 1.5344 (12) |
C10—H10 | 1.0000 | C31—C32 | 1.5387 (13) |
C11—C12 | 1.5277 (14) | C31—H31 | 1.0000 |
C11—H11A | 0.9900 | C32—C33 | 1.5328 (14) |
C11—H11B | 0.9900 | C32—H32A | 0.9900 |
C12—H12A | 0.9800 | C32—H32B | 0.9900 |
C12—H12B | 0.9800 | C33—C34 | 1.5256 (14) |
C12—H12C | 0.9800 | C33—H33A | 0.9900 |
C13—C14 | 1.5326 (13) | C33—H33B | 0.9900 |
C13—C18 | 1.5378 (12) | C34—C35 | 1.5344 (13) |
C13—H13 | 1.0000 | C34—H34A | 0.9900 |
C14—C15 | 1.5336 (14) | C34—H34B | 0.9900 |
C14—H14A | 0.9900 | C35—C36 | 1.5238 (13) |
C14—H14B | 0.9900 | C35—H35A | 0.9900 |
C15—C16 | 1.5245 (14) | C35—H35B | 0.9900 |
C15—H15A | 0.9900 | C36—H36 | 1.0000 |
C1—N1—C8 | 110.14 (7) | C16—C17—H17B | 109.6 |
C1—N1—C36 | 113.44 (7) | C18—C17—H17B | 109.6 |
C8—N1—C36 | 114.00 (7) | H17A—C17—H17B | 108.1 |
C1—N1—H1 | 109.2 (9) | N3—C18—C17 | 115.38 (8) |
C8—N1—H1 | 106.1 (9) | N3—C18—C13 | 111.61 (7) |
C36—N1—H1 | 103.4 (9) | C17—C18—C13 | 110.41 (8) |
C31—N2—C28 | 117.74 (7) | N3—C18—H18 | 106.3 |
C31—N2—H2 | 109.3 (9) | C17—C18—H18 | 106.3 |
C28—N2—H2 | 108.9 (9) | C13—C18—H18 | 106.3 |
C19—N3—C26 | 108.30 (7) | N3—C19—C20 | 110.80 (8) |
C19—N3—C18 | 113.43 (7) | N3—C19—H19A | 109.5 |
C26—N3—C18 | 113.09 (7) | C20—C19—H19A | 109.5 |
C13—N4—C10 | 117.05 (7) | N3—C19—H19B | 109.5 |
C13—N4—H4 | 106.9 (9) | C20—C19—H19B | 109.5 |
C10—N4—H4 | 108.9 (9) | H19A—C19—H19B | 108.1 |
O2—N5—O3 | 120.46 (10) | C21—C20—C25 | 118.57 (9) |
O2—N5—O1 | 119.90 (9) | C21—C20—C19 | 120.93 (9) |
O3—N5—O1 | 119.64 (9) | C25—C20—C19 | 120.51 (9) |
N1—C1—C2 | 110.71 (8) | C22—C21—C20 | 120.56 (10) |
N1—C1—H1A | 109.5 | C22—C21—H21 | 119.7 |
C2—C1—H1A | 109.5 | C20—C21—H21 | 119.7 |
N1—C1—H1B | 109.5 | C23—C22—C21 | 120.26 (9) |
C2—C1—H1B | 109.5 | C23—C22—H22 | 119.9 |
H1A—C1—H1B | 108.1 | C21—C22—H22 | 119.9 |
C3—C2—C7 | 119.47 (9) | C22—C23—C24 | 119.83 (9) |
C3—C2—C1 | 120.00 (9) | C22—C23—H23 | 120.1 |
C7—C2—C1 | 120.53 (9) | C24—C23—H23 | 120.1 |
C4—C3—C2 | 120.45 (9) | C25—C24—C23 | 119.68 (10) |
C4—C3—H3A | 119.8 | C25—C24—H24 | 120.2 |
C2—C3—H3A | 119.8 | C23—C24—H24 | 120.2 |
C3—C4—C5 | 119.63 (10) | C24—C25—C20 | 121.11 (9) |
C3—C4—H4A | 120.2 | C24—C25—H25 | 119.4 |
C5—C4—H4A | 120.2 | C20—C25—H25 | 119.4 |
C6—C5—C4 | 120.20 (9) | N3—C26—C27 | 116.35 (8) |
C6—C5—H5 | 119.9 | N3—C26—H26A | 108.2 |
C4—C5—H5 | 119.9 | C27—C26—H26A | 108.2 |
C5—C6—C7 | 120.15 (10) | N3—C26—H26B | 108.2 |
C5—C6—H6 | 119.9 | C27—C26—H26B | 108.2 |
C7—C6—H6 | 119.9 | H26A—C26—H26B | 107.4 |
C6—C7—C2 | 120.10 (10) | C26—C27—C28 | 115.93 (8) |
C6—C7—H7 | 120.0 | C26—C27—H27A | 108.3 |
C2—C7—H7 | 120.0 | C28—C27—H27A | 108.3 |
N1—C8—C9 | 114.58 (8) | C26—C27—H27B | 108.3 |
N1—C8—H8A | 108.6 | C28—C27—H27B | 108.3 |
C9—C8—H8A | 108.6 | H27A—C27—H27B | 107.4 |
N1—C8—H8B | 108.6 | N2—C28—C29 | 110.17 (8) |
C9—C8—H8B | 108.6 | N2—C28—C27 | 108.73 (7) |
H8A—C8—H8B | 107.6 | C29—C28—C27 | 110.59 (8) |
C8—C9—C10 | 114.44 (8) | N2—C28—H28 | 109.1 |
C8—C9—H9A | 108.7 | C29—C28—H28 | 109.1 |
C10—C9—H9A | 108.7 | C27—C28—H28 | 109.1 |
C8—C9—H9B | 108.7 | C30—C29—C28 | 114.03 (9) |
C10—C9—H9B | 108.7 | C30—C29—H29A | 108.7 |
H9A—C9—H9B | 107.6 | C28—C29—H29A | 108.7 |
N4—C10—C11 | 113.13 (8) | C30—C29—H29B | 108.7 |
N4—C10—C9 | 108.99 (7) | C28—C29—H29B | 108.7 |
C11—C10—C9 | 110.91 (8) | H29A—C29—H29B | 107.6 |
N4—C10—H10 | 107.9 | C29—C30—H30A | 109.5 |
C11—C10—H10 | 107.9 | C29—C30—H30B | 109.5 |
C9—C10—H10 | 107.9 | H30A—C30—H30B | 109.5 |
C12—C11—C10 | 114.31 (9) | C29—C30—H30C | 109.5 |
C12—C11—H11A | 108.7 | H30A—C30—H30C | 109.5 |
C10—C11—H11A | 108.7 | H30B—C30—H30C | 109.5 |
C12—C11—H11B | 108.7 | N2—C31—C36 | 107.60 (7) |
C10—C11—H11B | 108.7 | N2—C31—C32 | 116.47 (8) |
H11A—C11—H11B | 107.6 | C36—C31—C32 | 107.83 (8) |
C11—C12—H12A | 109.5 | N2—C31—H31 | 108.2 |
C11—C12—H12B | 109.5 | C36—C31—H31 | 108.2 |
H12A—C12—H12B | 109.5 | C32—C31—H31 | 108.2 |
C11—C12—H12C | 109.5 | C33—C32—C31 | 110.91 (8) |
H12A—C12—H12C | 109.5 | C33—C32—H32A | 109.5 |
H12B—C12—H12C | 109.5 | C31—C32—H32A | 109.5 |
N4—C13—C14 | 111.39 (8) | C33—C32—H32B | 109.5 |
N4—C13—C18 | 107.91 (7) | C31—C32—H32B | 109.5 |
C14—C13—C18 | 109.56 (8) | H32A—C32—H32B | 108.0 |
N4—C13—H13 | 109.3 | C34—C33—C32 | 111.53 (8) |
C14—C13—H13 | 109.3 | C34—C33—H33A | 109.3 |
C18—C13—H13 | 109.3 | C32—C33—H33A | 109.3 |
C13—C14—C15 | 111.35 (8) | C34—C33—H33B | 109.3 |
C13—C14—H14A | 109.4 | C32—C33—H33B | 109.3 |
C15—C14—H14A | 109.4 | H33A—C33—H33B | 108.0 |
C13—C14—H14B | 109.4 | C33—C34—C35 | 111.45 (8) |
C15—C14—H14B | 109.4 | C33—C34—H34A | 109.3 |
H14A—C14—H14B | 108.0 | C35—C34—H34A | 109.3 |
C16—C15—C14 | 111.55 (8) | C33—C34—H34B | 109.3 |
C16—C15—H15A | 109.3 | C35—C34—H34B | 109.3 |
C14—C15—H15A | 109.3 | H34A—C34—H34B | 108.0 |
C16—C15—H15B | 109.3 | C36—C35—C34 | 109.00 (8) |
C14—C15—H15B | 109.3 | C36—C35—H35A | 109.9 |
H15A—C15—H15B | 108.0 | C34—C35—H35A | 109.9 |
C15—C16—C17 | 110.92 (8) | C36—C35—H35B | 109.9 |
C15—C16—H16A | 109.5 | C34—C35—H35B | 109.9 |
C17—C16—H16A | 109.5 | H35A—C35—H35B | 108.3 |
C15—C16—H16B | 109.5 | N1—C36—C35 | 113.28 (8) |
C17—C16—H16B | 109.5 | N1—C36—C31 | 110.70 (7) |
H16A—C16—H16B | 108.0 | C35—C36—C31 | 112.06 (8) |
C16—C17—C18 | 110.15 (8) | N1—C36—H36 | 106.8 |
C16—C17—H17A | 109.6 | C35—C36—H36 | 106.8 |
C18—C17—H17A | 109.6 | C31—C36—H36 | 106.8 |
C8—N1—C1—C2 | 66.13 (10) | C26—N3—C19—C20 | −70.03 (9) |
C36—N1—C1—C2 | −164.73 (8) | C18—N3—C19—C20 | 163.57 (8) |
N1—C1—C2—C3 | 74.22 (11) | N3—C19—C20—C21 | 111.49 (10) |
N1—C1—C2—C7 | −105.98 (10) | N3—C19—C20—C25 | −68.03 (11) |
C7—C2—C3—C4 | 0.50 (15) | C25—C20—C21—C22 | 0.13 (15) |
C1—C2—C3—C4 | −179.69 (9) | C19—C20—C21—C22 | −179.40 (9) |
C2—C3—C4—C5 | −0.15 (15) | C20—C21—C22—C23 | 0.30 (15) |
C3—C4—C5—C6 | −0.24 (16) | C21—C22—C23—C24 | −0.43 (15) |
C4—C5—C6—C7 | 0.29 (16) | C22—C23—C24—C25 | 0.12 (15) |
C5—C6—C7—C2 | 0.05 (15) | C23—C24—C25—C20 | 0.32 (15) |
C3—C2—C7—C6 | −0.45 (15) | C21—C20—C25—C24 | −0.44 (15) |
C1—C2—C7—C6 | 179.74 (9) | C19—C20—C25—C24 | 179.09 (9) |
C1—N1—C8—C9 | −175.10 (8) | C19—N3—C26—C27 | 178.66 (8) |
C36—N1—C8—C9 | 56.07 (10) | C18—N3—C26—C27 | −54.73 (11) |
N1—C8—C9—C10 | 71.93 (10) | N3—C26—C27—C28 | −73.19 (10) |
C13—N4—C10—C11 | −68.49 (10) | C31—N2—C28—C29 | 73.32 (10) |
C13—N4—C10—C9 | 167.63 (8) | C31—N2—C28—C27 | −165.34 (8) |
C8—C9—C10—N4 | −50.59 (10) | C26—C27—C28—N2 | 53.90 (10) |
C8—C9—C10—C11 | −175.77 (8) | C26—C27—C28—C29 | 174.98 (8) |
N4—C10—C11—C12 | 177.23 (8) | N2—C28—C29—C30 | −176.58 (8) |
C9—C10—C11—C12 | −59.95 (11) | C27—C28—C29—C30 | 63.19 (11) |
C10—N4—C13—C14 | −67.86 (10) | C28—N2—C31—C36 | −175.09 (8) |
C10—N4—C13—C18 | 171.85 (7) | C28—N2—C31—C32 | 63.80 (11) |
N4—C13—C14—C15 | −175.82 (8) | N2—C31—C32—C33 | 178.67 (8) |
C18—C13—C14—C15 | −56.50 (10) | C36—C31—C32—C33 | 57.68 (10) |
C13—C14—C15—C16 | 55.23 (11) | C31—C32—C33—C34 | −56.30 (11) |
C14—C15—C16—C17 | −55.12 (12) | C32—C33—C34—C35 | 54.94 (12) |
C15—C16—C17—C18 | 56.98 (11) | C33—C34—C35—C36 | −55.57 (11) |
C19—N3—C18—C17 | 61.89 (10) | C1—N1—C36—C35 | −67.88 (10) |
C26—N3—C18—C17 | −61.94 (10) | C8—N1—C36—C35 | 59.27 (10) |
C19—N3—C18—C13 | −65.20 (10) | C1—N1—C36—C31 | 58.97 (10) |
C26—N3—C18—C13 | 170.97 (8) | C8—N1—C36—C31 | −173.89 (8) |
C16—C17—C18—N3 | 173.18 (8) | C34—C35—C36—N1 | −174.29 (8) |
C16—C17—C18—C13 | −59.12 (10) | C34—C35—C36—C31 | 59.58 (10) |
N4—C13—C18—N3 | −50.19 (10) | N2—C31—C36—N1 | 45.54 (10) |
C14—C13—C18—N3 | −171.62 (8) | C32—C31—C36—N1 | 171.92 (8) |
N4—C13—C18—C17 | −179.93 (7) | N2—C31—C36—C35 | 173.06 (7) |
C14—C13—C18—C17 | 58.63 (10) | C32—C31—C36—C35 | −60.55 (10) |
Cg1 and Cg2 are the centroids of the C2–C7 and C20–C25 benzene rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N2 | 0.90 (1) | 2.32 (1) | 2.7400 (11) | 108 (1) |
N1—H1···N4 | 0.90 (1) | 2.12 (1) | 2.8156 (11) | 134 (1) |
N2—H2···N3 | 0.88 (1) | 2.19 (1) | 2.9293 (11) | 142 (1) |
N4—H4···N3 | 0.88 (1) | 2.33 (1) | 2.7992 (11) | 113 (1) |
C1—H1a···O1 | 0.99 | 2.36 | 3.2096 (13) | 143 |
C9—H9a···O3i | 0.99 | 2.40 | 3.3620 (12) | 165 |
C34—H34a···O3i | 0.99 | 2.50 | 3.3876 (13) | 150 |
C8—H8a···Cg3ii | 0.99 | 2.53 | 3.4008 (11) | 146 |
C26—H26b···Cg1iii | 0.99 | 2.71 | 3.5899 (11) | 149 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+1/2; (ii) −x+1/2, y−1/2, −z+1/2; (iii) −x+3/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C36H57N4+·NO3− |
Mr | 607.87 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 10.7882 (1), 16.2785 (1), 19.0962 (1) |
β (°) | 98.2461 (6) |
V (Å3) | 3318.92 (4) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 0.61 |
Crystal size (mm) | 0.30 × 0.20 × 0.10 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.839, 0.942 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 24730, 6689, 6289 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.120, 1.06 |
No. of reflections | 6689 |
No. of parameters | 409 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.25 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
Cg1 and Cg2 are the centroids of the C2–C7 and C20–C25 benzene rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N2 | 0.897 (11) | 2.323 (13) | 2.7400 (11) | 108.3 (10) |
N1—H1···N4 | 0.897 (11) | 2.122 (11) | 2.8156 (11) | 133.5 (11) |
N2—H2···N3 | 0.876 (11) | 2.193 (10) | 2.9293 (11) | 141.5 (11) |
N4—H4···N3 | 0.882 (10) | 2.332 (12) | 2.7992 (11) | 113.2 (10) |
C1—H1a···O1 | 0.99 | 2.36 | 3.2096 (13) | 143 |
C9—H9a···O3i | 0.99 | 2.40 | 3.3620 (12) | 165 |
C34—H34a···O3i | 0.99 | 2.50 | 3.3876 (13) | 150 |
C8—H8a···Cg3ii | 0.99 | 2.53 | 3.4008 (11) | 146 |
C26—H26b···Cg1iii | 0.99 | 2.71 | 3.5899 (11) | 149 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+1/2; (ii) −x+1/2, y−1/2, −z+1/2; (iii) −x+3/2, y+1/2, −z+1/2. |
Footnotes
‡Additional correspondence author, e-mail: jhchoi@andong.ac.kr.
Acknowledgements
We thank Andong National University and the University of Malaya for supporting this study. MAS thanks the National Research Foundation of Korea for a postdoctoral fellowship grant.
References
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, England. Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Choi, J.-H., Clegg, W. & Harrington, R. W. (2010a). J. Chem. Crystallogr. 40, 80–84. Web of Science CSD CrossRef CAS Google Scholar
Choi, J.-H., Clegg, W., Harrington, R. W., Yoon, H.-M. & Hong, Y. P. (2006). Acta Cryst. E62, o644–o646. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Choi, J.-H., Clegg, W. & Nichol, G. S. (2010b). Z. Anorg. Allg. Chem. 636, 1612–1616. CSD CrossRef CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Lim, J. H., Kang, J. S., Kim, H. C., Koh, E. K. & Hong, C. S. (2006). Inorg. Chem. 45, 7821–7827. Web of Science CSD CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title salt, (I), was isolated unexpectedly during the course of studies of partially N-substituted tetraazamacrocycles of interest owing to their various applications (Choi et al., 2006; Choi et al., 2010a; Choi, et al., 2010b). As seen in Fig. 1, one of the tertiary amine-N atoms, i.e. N1, has been protonated with the charge balance provided by the nitrate anion. The four nitrogen atoms lie in a plane with a r.m.s. deviation = 0.0053 Å; the maximum deviation from the least-squares plane is 0.0055 (4) Å for atom N1. This observation is readily explained in terms of the intramolecular N—H···N hydrogen bonds with the N1—H1 atom being bifurcated, Table 1 and Fig. 2. With reference to this plane, the benzyl groups lie to either side and are twisted with respect to the N4 plane as seen in the values of the dihedral angles of 63.62 (3) and 66.25 (3) ° formed with rings (C2—C7) and (C20—C25), respectively. Similarly, the cyclohexyl rings, each with a chair conformation, lie to either side of the N4 plane.
The anion is associated with the cation via C—H···O contacts, Table 1, so that the nitrate-O1 forms a contact with a benzyl-methylene-H, and the nitrate-O3 atom bridges a methylene-H derived from a cyclohexyl ring and a methylene-H from the macrocyclic framework. The result is the formation of a helical supramolecular chain along the b-axis, Fig. 2. Chains are consolidated into layers in the ab-plane via C—H···π interactions involving benzene rings, Table 1 and Fig. 3.