metal-organic compounds
trans-Bis(acetato-κO)diaquabis(2-aminopyrazine-κN4)manganese(II) dihydrate
aKey Laboratory of Functional Inorganic Material Chemistry, Ministry of Education, Heilongjiang University, Harbin 150080, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and, Chemistry Department, Faculty of Science, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: seikweng@um.edu.my
The MnII atom in the title compound, [Mn(CH3COO)2(C4H5N3)2(H2O)2]·2H2O, is situated on a center of inversion and shows an octahedral made up by four O atoms and two N atoms. The octahedron is somewhat tetragonally distorted owing to the longer Mn—N bond [2.323 (3) Å]. The mononuclear complex molecule and uncoordinated water molecules are linked by O—H⋯N, N—H⋯O and O—H⋯O hydrogen bonds, generating a three-dimensional network.
Experimental
Crystal data
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Refinement
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811028583/im2304sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811028583/im2304Isup2.hkl
To an aqueous solution of 2-aminopyrazine (1 mmol) was added manganese acetate tetrahydrate (1 mmol). The mixture was stirred for 30 min and then filtered. Colorless crystals of the title complex separated from the solution after a few days.
Carbon-bound H-atoms were placed in calculated positions (C–H 0.93 Å) and were included in the
using the riding model approximation, with U(H) set to 1.2U(C). The amino and water H-atoms were located in a difference Fourier map, and were refined with distance restraints N–H 0.88±0.01 Å, O–H 0.84±0.01 Å and H···H 1.37±0.01 Å; their temperature factors were refined.The largest peaks/holes in the final difference Fourier map were found in close vicinity of Mn1.
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalClear (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of Mn(H2O)2(C2H3O2)2(C4H5N3)2 × 2 H2O at the 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius. | |
Fig. 2. Three-dimensional hydrogen-bonded network of the title compound. Hydrogen bonds are depicted as dashed lines. |
[Mn(C2H3O2)2(C4H5N3)2(H2O)2]·2H2O | Z = 1 |
Mr = 435.31 | F(000) = 227 |
Triclinic, P1 | Dx = 1.458 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.0761 (7) Å | Cell parameters from 3626 reflections |
b = 8.5411 (8) Å | θ = 3.3–27.5° |
c = 9.5162 (10) Å | µ = 0.72 mm−1 |
α = 100.866 (3)° | T = 293 K |
β = 105.036 (3)° | Prism, colorless |
γ = 110.250 (3)° | 0.10 × 0.08 × 0.05 mm |
V = 495.92 (9) Å3 |
Rigaku R-AXIS RAPID IP diffractometer | 2249 independent reflections |
Radiation source: fine-focus sealed tube | 1558 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ω scans | θmax = 27.5°, θmin = 3.3° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −8→9 |
Tmin = 0.932, Tmax = 0.965 | k = −11→11 |
4911 measured reflections | l = −12→12 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.159 | w = 1/[σ2(Fo2) + (0.0633P)2 + 0.7384P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.001 |
2249 reflections | Δρmax = 0.80 e Å−3 |
148 parameters | Δρmin = −1.01 e Å−3 |
8 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.021 (8) |
[Mn(C2H3O2)2(C4H5N3)2(H2O)2]·2H2O | γ = 110.250 (3)° |
Mr = 435.31 | V = 495.92 (9) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.0761 (7) Å | Mo Kα radiation |
b = 8.5411 (8) Å | µ = 0.72 mm−1 |
c = 9.5162 (10) Å | T = 293 K |
α = 100.866 (3)° | 0.10 × 0.08 × 0.05 mm |
β = 105.036 (3)° |
Rigaku R-AXIS RAPID IP diffractometer | 2249 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1558 reflections with I > 2σ(I) |
Tmin = 0.932, Tmax = 0.965 | Rint = 0.033 |
4911 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 8 restraints |
wR(F2) = 0.159 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.80 e Å−3 |
2249 reflections | Δρmin = −1.01 e Å−3 |
148 parameters |
x | y | z | Uiso*/Ueq | ||
Mn1 | 0.5000 | 0.5000 | 0.5000 | 0.0358 (3) | |
O1 | 0.6700 (4) | 0.6113 (3) | 0.7465 (3) | 0.0413 (6) | |
O2 | 0.9808 (5) | 0.5959 (6) | 0.7684 (4) | 0.0826 (12) | |
O1W | 0.7647 (4) | 0.4463 (3) | 0.4659 (3) | 0.0414 (6) | |
H11 | 0.858 (6) | 0.503 (5) | 0.553 (3) | 0.082 (18)* | |
H12 | 0.763 (8) | 0.346 (3) | 0.440 (5) | 0.09 (2)* | |
O2W | 0.4054 (5) | 0.6764 (5) | −0.0904 (4) | 0.0719 (10) | |
H21 | 0.470 (6) | 0.649 (7) | −0.147 (4) | 0.085 (18)* | |
H22 | 0.273 (2) | 0.636 (6) | −0.141 (4) | 0.084 (18)* | |
N1 | 0.6498 (5) | 0.7758 (4) | 0.4722 (3) | 0.0406 (7) | |
N2 | 0.7601 (5) | 1.1077 (4) | 0.4338 (4) | 0.0464 (8) | |
N3 | 0.6301 (9) | 0.9802 (5) | 0.1732 (4) | 0.0738 (13) | |
H31 | 0.562 (9) | 0.888 (5) | 0.091 (4) | 0.111* | |
H32 | 0.654 (10) | 1.085 (4) | 0.163 (7) | 0.111* | |
C1 | 0.7478 (6) | 0.9231 (5) | 0.5927 (4) | 0.0465 (9) | |
H1 | 0.7803 | 0.9147 | 0.6914 | 0.056* | |
C2 | 0.7999 (7) | 1.0845 (5) | 0.5717 (4) | 0.0476 (9) | |
H2 | 0.8665 | 1.1830 | 0.6576 | 0.057* | |
C3 | 0.6692 (7) | 0.9628 (5) | 0.3141 (4) | 0.0448 (9) | |
C4 | 0.6154 (6) | 0.7964 (5) | 0.3351 (4) | 0.0408 (8) | |
H4 | 0.5537 | 0.6977 | 0.2497 | 0.049* | |
C5 | 0.8583 (6) | 0.6370 (5) | 0.8229 (4) | 0.0428 (8) | |
C6 | 0.9380 (8) | 0.7229 (7) | 0.9942 (5) | 0.0659 (13) | |
H6A | 1.0903 | 0.7569 | 1.0363 | 0.099* | |
H6B | 0.8658 | 0.6414 | 1.0402 | 0.099* | |
H6C | 0.9085 | 0.8248 | 1.0145 | 0.099* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.0395 (5) | 0.0376 (4) | 0.0301 (4) | 0.0194 (3) | 0.0089 (3) | 0.0084 (3) |
O1 | 0.0417 (14) | 0.0507 (15) | 0.0297 (12) | 0.0216 (12) | 0.0082 (10) | 0.0099 (11) |
O2 | 0.0530 (19) | 0.146 (3) | 0.0437 (17) | 0.054 (2) | 0.0102 (14) | 0.0016 (19) |
O1W | 0.0385 (14) | 0.0421 (15) | 0.0414 (15) | 0.0189 (11) | 0.0122 (12) | 0.0067 (12) |
O2W | 0.0502 (19) | 0.097 (3) | 0.0474 (18) | 0.0277 (19) | 0.0103 (15) | −0.0094 (17) |
N1 | 0.0447 (17) | 0.0347 (15) | 0.0428 (17) | 0.0181 (13) | 0.0142 (14) | 0.0116 (13) |
N2 | 0.057 (2) | 0.0371 (16) | 0.0435 (17) | 0.0194 (14) | 0.0172 (15) | 0.0115 (14) |
N3 | 0.124 (4) | 0.048 (2) | 0.042 (2) | 0.030 (2) | 0.022 (2) | 0.0184 (17) |
C1 | 0.054 (2) | 0.045 (2) | 0.0352 (19) | 0.0192 (17) | 0.0118 (16) | 0.0099 (16) |
C2 | 0.055 (2) | 0.0359 (19) | 0.041 (2) | 0.0151 (17) | 0.0117 (17) | 0.0050 (16) |
C3 | 0.055 (2) | 0.042 (2) | 0.0385 (19) | 0.0226 (17) | 0.0156 (17) | 0.0115 (16) |
C4 | 0.047 (2) | 0.0354 (18) | 0.0382 (19) | 0.0155 (15) | 0.0159 (16) | 0.0093 (15) |
C5 | 0.045 (2) | 0.044 (2) | 0.0321 (18) | 0.0159 (16) | 0.0069 (15) | 0.0099 (15) |
C6 | 0.059 (3) | 0.094 (4) | 0.033 (2) | 0.034 (3) | 0.0049 (19) | 0.005 (2) |
Mn1—O1Wi | 2.163 (3) | N2—C3 | 1.335 (5) |
Mn1—O1W | 2.163 (3) | N2—C2 | 1.336 (5) |
Mn1—O1i | 2.181 (2) | N3—C3 | 1.344 (5) |
Mn1—O1 | 2.181 (2) | N3—H31 | 0.879 (10) |
Mn1—N1i | 2.323 (3) | N3—H32 | 0.878 (10) |
Mn1—N1 | 2.323 (3) | C1—C2 | 1.366 (5) |
O1—C5 | 1.260 (4) | C1—H1 | 0.9300 |
O2—C5 | 1.232 (5) | C2—H2 | 0.9300 |
O1W—H11 | 0.840 (10) | C3—C4 | 1.406 (5) |
O1W—H12 | 0.841 (10) | C4—H4 | 0.9300 |
O2W—H21 | 0.838 (10) | C5—C6 | 1.516 (5) |
O2W—H22 | 0.838 (10) | C6—H6A | 0.9600 |
N1—C4 | 1.321 (5) | C6—H6B | 0.9600 |
N1—C1 | 1.348 (5) | C6—H6C | 0.9600 |
O1Wi—Mn1—O1W | 180.000 (1) | C3—N3—H31 | 121 (4) |
O1Wi—Mn1—O1i | 91.79 (10) | C3—N3—H32 | 119 (4) |
O1W—Mn1—O1i | 88.21 (9) | H31—N3—H32 | 119 (6) |
O1Wi—Mn1—O1 | 88.21 (10) | N1—C1—C2 | 120.9 (4) |
O1W—Mn1—O1 | 91.79 (10) | N1—C1—H1 | 119.6 |
O1i—Mn1—O1 | 180.000 (1) | C2—C1—H1 | 119.6 |
O1Wi—Mn1—N1i | 90.34 (10) | N2—C2—C1 | 123.2 (3) |
O1W—Mn1—N1i | 89.66 (10) | N2—C2—H2 | 118.4 |
O1i—Mn1—N1i | 89.93 (10) | C1—C2—H2 | 118.4 |
O1—Mn1—N1i | 90.07 (10) | N2—C3—N3 | 118.3 (4) |
O1Wi—Mn1—N1 | 89.66 (10) | N2—C3—C4 | 120.7 (3) |
O1W—Mn1—N1 | 90.34 (10) | N3—C3—C4 | 121.0 (3) |
O1i—Mn1—N1 | 90.07 (10) | N1—C4—C3 | 122.1 (3) |
O1—Mn1—N1 | 89.93 (10) | N1—C4—H4 | 118.9 |
N1i—Mn1—N1 | 180.000 (1) | C3—C4—H4 | 118.9 |
C5—O1—Mn1 | 128.8 (2) | O2—C5—O1 | 124.7 (3) |
Mn1—O1W—H11 | 99 (3) | O2—C5—C6 | 118.0 (4) |
Mn1—O1W—H12 | 125 (4) | O1—C5—C6 | 117.4 (4) |
H11—O1W—H12 | 109 (2) | C5—C6—H6A | 109.5 |
H21—O2W—H22 | 110 (2) | C5—C6—H6B | 109.5 |
C4—N1—C1 | 116.8 (3) | H6A—C6—H6B | 109.5 |
C4—N1—Mn1 | 120.7 (2) | C5—C6—H6C | 109.5 |
C1—N1—Mn1 | 121.9 (2) | H6A—C6—H6C | 109.5 |
C3—N2—C2 | 116.2 (3) | H6B—C6—H6C | 109.5 |
O1Wi—Mn1—O1—C5 | −175.9 (3) | C4—N1—C1—C2 | 2.6 (6) |
O1W—Mn1—O1—C5 | 4.1 (3) | Mn1—N1—C1—C2 | −168.1 (3) |
N1i—Mn1—O1—C5 | 93.7 (3) | C3—N2—C2—C1 | −1.6 (6) |
N1—Mn1—O1—C5 | −86.3 (3) | N1—C1—C2—N2 | −0.5 (6) |
O1Wi—Mn1—N1—C4 | −95.9 (3) | C2—N2—C3—N3 | −178.7 (4) |
O1W—Mn1—N1—C4 | 84.1 (3) | C2—N2—C3—C4 | 1.5 (6) |
O1i—Mn1—N1—C4 | −4.2 (3) | C1—N1—C4—C3 | −2.7 (5) |
O1—Mn1—N1—C4 | 175.8 (3) | Mn1—N1—C4—C3 | 168.1 (3) |
O1Wi—Mn1—N1—C1 | 74.3 (3) | N2—C3—C4—N1 | 0.7 (6) |
O1W—Mn1—N1—C1 | −105.7 (3) | N3—C3—C4—N1 | −179.1 (4) |
O1i—Mn1—N1—C1 | 166.1 (3) | Mn1—O1—C5—O2 | −2.8 (6) |
O1—Mn1—N1—C1 | −13.9 (3) | Mn1—O1—C5—C6 | 178.0 (3) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H11···O2 | 0.84 (1) | 1.89 (2) | 2.690 (4) | 160 (5) |
O1w—H12···N2ii | 0.84 (1) | 2.02 (2) | 2.837 (4) | 165 (5) |
O2w—H21···O1iii | 0.84 (1) | 2.02 (1) | 2.851 (4) | 171 (4) |
O2w—H22···O2iv | 0.84 (1) | 1.90 (2) | 2.726 (5) | 167 (5) |
N3—H31···O2w | 0.88 (1) | 1.98 (1) | 2.859 (5) | 178 (6) |
Symmetry codes: (ii) x, y−1, z; (iii) x, y, z−1; (iv) x−1, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Mn(C2H3O2)2(C4H5N3)2(H2O)2]·2H2O |
Mr | 435.31 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.0761 (7), 8.5411 (8), 9.5162 (10) |
α, β, γ (°) | 100.866 (3), 105.036 (3), 110.250 (3) |
V (Å3) | 495.92 (9) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.72 |
Crystal size (mm) | 0.10 × 0.08 × 0.05 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.932, 0.965 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4911, 2249, 1558 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.159, 1.07 |
No. of reflections | 2249 |
No. of parameters | 148 |
No. of restraints | 8 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.80, −1.01 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalClear (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H11···O2 | 0.84 (1) | 1.89 (2) | 2.690 (4) | 160 (5) |
O1w—H12···N2i | 0.84 (1) | 2.02 (2) | 2.837 (4) | 165 (5) |
O2w—H21···O1ii | 0.84 (1) | 2.02 (1) | 2.851 (4) | 171 (4) |
O2w—H22···O2iii | 0.84 (1) | 1.90 (2) | 2.726 (5) | 167 (5) |
N3—H31···O2w | 0.88 (1) | 1.98 (1) | 2.859 (5) | 178 (6) |
Symmetry codes: (i) x, y−1, z; (ii) x, y, z−1; (iii) x−1, y, z−1. |
Acknowledgements
This work was supported by the Key Project of the Natural Science Foundation of Heilongjiang Province (No. ZD200903), the Innovation Team of the Education Bureau of Heilongjiang Province (No. 2010 t d03), the Key Project of the Education Bureau of Heilongjiang Province (No. 12511z023) and the University of Malaya.
References
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There are few crystal structure studies of N-heterocyclic adducts of manganese acetate, the latter crystallizing as a dihydrate (Cheng & Wang, 1991). Other first-row transition metal acetates furnish a large number of adducts. The MnII atom in Mn(H2O)2(C2H3O2)2(C4H5N3)2 × 2 H2O (Scheme I, Fig. 1) shows an octahedral coordination polyhedron made up by four O atoms and two N atoms. The octahedron is somewhat tetragonally distorted owing to the longer Mn–N bond. The mononuclear complex molecule and lattice water molecules are linked hydrogen bonds to generate a three-dimensional network (Table 1, Fig. 2).