organic compounds
Methyl 6-(4-chlorophenyl)-2,4-dimethyl-1,3-dioxo-1,2,3,4,6,6a,7,12b-octahydrochromeno[4′,3′:4,5]pyrano[2,3-d]pyrimidine-6a-carboxylate
aDepartment of Physics, Velammal Institute of Technology, Panchetty, Chennai 601 204, India, bDepartment of Physics, Presidency College (Autonomous), Chennai 600 005, India, cDepartment of Organic Chemistry, University of Madras, Maraimalai campus, Chennai 600 025, India, and dDepartment of Research and Development, PRIST University, Vallam, Thanjavur 613 403, Tamil Nadu, India
*Correspondence e-mail: crystallography2010@gmail.com, phdguna@gmail.com
In the title compound, C24H21ClN2O6, the two fused six-membered pyran rings adopt half-chair conformations. The dihedral angle between the pyrimidine ring and the chlorophenyl ring is 51.55 (3)°. In the crystal, molecules are linked by pairs of weak intermolecular C—H⋯O hydrogen bonds, forming inversion dimers. A C—H⋯π interaction is also observed.
Related literature
For biological activity of pyrimidine derivatives, see: Alam et al. (2005); Kappe (2000); Condon et al. (1993); Rovnyak et al. (1995); Leite et al. (2006); Sriram et al. (2006). For related structures, see: Booysen et al. (2011); Noroozi Pesyan et al. (2009).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053681102678X/is2742sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681102678X/is2742Isup2.hkl
Supporting information file. DOI: 10.1107/S160053681102678X/is2742Isup3.cml
A mixture of (E)-methyl 2-((2-formylphenoxy)methyl)-3-(4-chlorophenyl)acrylate (0.330 g, 1 mmol) and N,N-dimethylbarbutric acid (0.156 g, 1 mmol) was placed in a round bottom flask and melted at 180 °C for 1 h. After completion of the reaction as indicated by TLC, the crude product was washed with 5 ml of ethylacetate and hexane mixture (1:49 ratio) which successfully provided the pure product methyl-6-(4-chlorophenyl)-2,4-dimethyl-1,3-dioxo- 1,2,3,4,6,6a,7,12octahydrochromeno[4',3',4,5]pyrano[2,3-d]pyrimidine- 6a-carboxylate, as colorless solid in 96% yield.
H atoms were positioned geometrically and refined using riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic CH, C—H = 0.98 Å and Uiso(H) = 1.2Ueq(C) for methine CH, C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for CH2, C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for CH3.
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C24H21ClN2O6 | F(000) = 976 |
Mr = 468.88 | Dx = 1.413 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7610 reflections |
a = 10.6177 (5) Å | θ = 2.2–30.2° |
b = 11.9973 (5) Å | µ = 0.22 mm−1 |
c = 17.5532 (8) Å | T = 295 K |
β = 99.751 (2)° | Block, colourless |
V = 2203.69 (17) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 7232 independent reflections |
Radiation source: fine-focus sealed tube | 4518 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
Detector resolution: 0 pixels mm-1 | θmax = 31.7°, θmin = 2.1° |
ω and ϕ scans | h = −15→15 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −15→17 |
Tmin = 0.924, Tmax = 0.951 | l = −25→25 |
29343 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.158 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0706P)2 + 0.6194P] where P = (Fo2 + 2Fc2)/3 |
7232 reflections | (Δ/σ)max = 0.005 |
301 parameters | Δρmax = 0.42 e Å−3 |
0 restraints | Δρmin = −0.60 e Å−3 |
C24H21ClN2O6 | V = 2203.69 (17) Å3 |
Mr = 468.88 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.6177 (5) Å | µ = 0.22 mm−1 |
b = 11.9973 (5) Å | T = 295 K |
c = 17.5532 (8) Å | 0.30 × 0.25 × 0.20 mm |
β = 99.751 (2)° |
Bruker Kappa APEXII CCD diffractometer | 7232 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 4518 reflections with I > 2σ(I) |
Tmin = 0.924, Tmax = 0.951 | Rint = 0.029 |
29343 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.158 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.42 e Å−3 |
7232 reflections | Δρmin = −0.60 e Å−3 |
301 parameters |
x | y | z | Uiso*/Ueq | ||
C1 | 0.76555 (18) | 0.06202 (16) | 0.37637 (10) | 0.0480 (4) | |
H1 | 0.7599 | 0.1389 | 0.3819 | 0.058* | |
C2 | 0.8645 (2) | 0.00508 (18) | 0.42011 (11) | 0.0568 (5) | |
H2 | 0.9268 | 0.0436 | 0.4536 | 0.068* | |
C3 | 0.87131 (19) | −0.10942 (17) | 0.41423 (11) | 0.0541 (5) | |
H3 | 0.9383 | −0.1480 | 0.4438 | 0.065* | |
C4 | 0.77967 (17) | −0.16628 (15) | 0.36499 (10) | 0.0459 (4) | |
H4 | 0.7837 | −0.2435 | 0.3616 | 0.055* | |
C5 | 0.68080 (14) | −0.10821 (13) | 0.32016 (9) | 0.0361 (3) | |
C6 | 0.47962 (14) | −0.12010 (12) | 0.23307 (8) | 0.0338 (3) | |
H6A | 0.4081 | −0.1706 | 0.2327 | 0.041* | |
H6B | 0.4906 | −0.1088 | 0.1799 | 0.041* | |
C7 | 0.44663 (14) | −0.00850 (12) | 0.26651 (8) | 0.0310 (3) | |
C8 | 0.56484 (14) | 0.06889 (12) | 0.27607 (8) | 0.0328 (3) | |
H8 | 0.5464 | 0.1355 | 0.3046 | 0.039* | |
C9 | 0.67411 (15) | 0.00706 (13) | 0.32418 (9) | 0.0351 (3) | |
C10 | 0.33697 (14) | 0.05058 (13) | 0.21285 (8) | 0.0338 (3) | |
H10 | 0.3240 | 0.1238 | 0.2350 | 0.041* | |
C11 | 0.49137 (15) | 0.10189 (13) | 0.13570 (9) | 0.0362 (3) | |
C12 | 0.58675 (15) | 0.10449 (13) | 0.19648 (9) | 0.0356 (3) | |
C13 | 0.70722 (17) | 0.15057 (14) | 0.18445 (11) | 0.0438 (4) | |
C14 | 0.6217 (2) | 0.16628 (16) | 0.04577 (11) | 0.0510 (4) | |
C15 | 0.21085 (14) | −0.00924 (13) | 0.19859 (9) | 0.0356 (3) | |
C16 | 0.18358 (16) | −0.09052 (16) | 0.14232 (10) | 0.0464 (4) | |
H16 | 0.2442 | −0.1090 | 0.1119 | 0.056* | |
C17 | 0.06716 (18) | −0.14441 (18) | 0.13101 (11) | 0.0529 (5) | |
H17 | 0.0493 | −0.1992 | 0.0932 | 0.063* | |
C18 | −0.02226 (16) | −0.11680 (17) | 0.17584 (11) | 0.0482 (4) | |
C19 | 0.00161 (17) | −0.03659 (19) | 0.23166 (12) | 0.0550 (5) | |
H19 | −0.0595 | −0.0188 | 0.2619 | 0.066* | |
C20 | 0.11761 (17) | 0.01751 (16) | 0.24245 (11) | 0.0483 (4) | |
H20 | 0.1339 | 0.0730 | 0.2798 | 0.058* | |
C21 | 0.3952 (2) | 0.13297 (19) | −0.00072 (10) | 0.0597 (5) | |
H21A | 0.3603 | 0.0592 | −0.0081 | 0.090* | |
H21B | 0.4218 | 0.1577 | −0.0475 | 0.090* | |
H21C | 0.3312 | 0.1828 | 0.0123 | 0.090* | |
C22 | 0.8425 (2) | 0.2140 (3) | 0.09356 (16) | 0.0834 (8) | |
H22A | 0.8659 | 0.1797 | 0.0486 | 0.125* | |
H22B | 0.9071 | 0.1990 | 0.1376 | 0.125* | |
H22C | 0.8348 | 0.2931 | 0.0857 | 0.125* | |
C23 | 0.40621 (15) | −0.02757 (14) | 0.34447 (9) | 0.0364 (3) | |
C24 | 0.3303 (3) | 0.0581 (2) | 0.44840 (13) | 0.0941 (10) | |
H24A | 0.3101 | −0.0184 | 0.4569 | 0.141* | |
H24B | 0.2547 | 0.1028 | 0.4461 | 0.141* | |
H24C | 0.3943 | 0.0835 | 0.4901 | 0.141* | |
N1 | 0.50522 (15) | 0.13185 (13) | 0.06206 (8) | 0.0447 (3) | |
N2 | 0.71979 (16) | 0.16862 (13) | 0.10700 (10) | 0.0523 (4) | |
O1 | 0.59218 (11) | −0.17168 (9) | 0.27413 (7) | 0.0444 (3) | |
O2 | 0.37171 (11) | 0.06736 (10) | 0.13744 (6) | 0.0408 (3) | |
O3 | 0.63502 (17) | 0.19131 (14) | −0.01960 (8) | 0.0738 (5) | |
O4 | 0.79552 (13) | 0.17313 (13) | 0.23567 (9) | 0.0621 (4) | |
O5 | 0.39933 (16) | −0.11577 (11) | 0.37358 (8) | 0.0623 (4) | |
O6 | 0.37805 (15) | 0.06763 (11) | 0.37639 (7) | 0.0581 (4) | |
Cl1 | −0.16887 (5) | −0.18537 (6) | 0.16129 (4) | 0.0765 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0536 (10) | 0.0389 (9) | 0.0480 (9) | −0.0044 (8) | −0.0018 (8) | −0.0048 (7) |
C2 | 0.0545 (11) | 0.0559 (12) | 0.0523 (10) | −0.0036 (9) | −0.0128 (8) | −0.0078 (9) |
C3 | 0.0480 (10) | 0.0566 (12) | 0.0523 (10) | 0.0083 (9) | −0.0069 (8) | −0.0013 (9) |
C4 | 0.0447 (9) | 0.0387 (9) | 0.0527 (10) | 0.0080 (7) | 0.0033 (7) | −0.0013 (7) |
C5 | 0.0350 (7) | 0.0340 (8) | 0.0392 (7) | 0.0002 (6) | 0.0056 (6) | −0.0032 (6) |
C6 | 0.0363 (7) | 0.0289 (7) | 0.0357 (7) | 0.0003 (6) | 0.0046 (6) | −0.0008 (6) |
C7 | 0.0342 (7) | 0.0277 (7) | 0.0316 (6) | 0.0001 (5) | 0.0076 (5) | 0.0014 (5) |
C8 | 0.0373 (7) | 0.0258 (7) | 0.0356 (7) | −0.0010 (6) | 0.0074 (6) | −0.0005 (5) |
C9 | 0.0371 (8) | 0.0309 (8) | 0.0369 (7) | −0.0015 (6) | 0.0050 (6) | −0.0003 (6) |
C10 | 0.0382 (7) | 0.0314 (8) | 0.0327 (7) | 0.0036 (6) | 0.0089 (6) | 0.0025 (6) |
C11 | 0.0462 (8) | 0.0288 (8) | 0.0361 (7) | 0.0018 (6) | 0.0142 (6) | 0.0033 (6) |
C12 | 0.0397 (8) | 0.0287 (7) | 0.0407 (8) | 0.0012 (6) | 0.0135 (6) | 0.0025 (6) |
C13 | 0.0435 (9) | 0.0366 (9) | 0.0549 (10) | 0.0011 (7) | 0.0191 (8) | 0.0027 (7) |
C14 | 0.0686 (12) | 0.0424 (10) | 0.0490 (10) | 0.0040 (8) | 0.0307 (9) | 0.0009 (8) |
C15 | 0.0343 (7) | 0.0363 (8) | 0.0360 (7) | 0.0054 (6) | 0.0057 (6) | 0.0018 (6) |
C16 | 0.0396 (8) | 0.0580 (11) | 0.0432 (9) | −0.0004 (8) | 0.0113 (7) | −0.0102 (8) |
C17 | 0.0461 (10) | 0.0610 (12) | 0.0499 (10) | −0.0055 (8) | 0.0037 (8) | −0.0112 (9) |
C18 | 0.0334 (8) | 0.0594 (12) | 0.0504 (9) | −0.0006 (7) | 0.0030 (7) | 0.0066 (8) |
C19 | 0.0386 (9) | 0.0707 (13) | 0.0592 (11) | 0.0044 (9) | 0.0179 (8) | −0.0048 (10) |
C20 | 0.0430 (9) | 0.0516 (11) | 0.0526 (10) | 0.0039 (8) | 0.0149 (8) | −0.0100 (8) |
C21 | 0.0799 (14) | 0.0630 (13) | 0.0364 (9) | 0.0073 (11) | 0.0098 (9) | 0.0083 (8) |
C22 | 0.0676 (15) | 0.099 (2) | 0.0960 (18) | −0.0118 (13) | 0.0491 (14) | 0.0139 (15) |
C23 | 0.0387 (8) | 0.0362 (8) | 0.0351 (7) | 0.0014 (6) | 0.0086 (6) | 0.0029 (6) |
C24 | 0.159 (3) | 0.0829 (18) | 0.0556 (13) | 0.0290 (18) | 0.0609 (16) | 0.0027 (12) |
N1 | 0.0588 (9) | 0.0422 (8) | 0.0361 (7) | 0.0027 (7) | 0.0168 (6) | 0.0048 (6) |
N2 | 0.0549 (9) | 0.0483 (9) | 0.0621 (10) | −0.0012 (7) | 0.0342 (8) | 0.0029 (7) |
O1 | 0.0370 (6) | 0.0292 (6) | 0.0629 (7) | 0.0029 (4) | −0.0030 (5) | −0.0083 (5) |
O2 | 0.0430 (6) | 0.0459 (7) | 0.0333 (5) | −0.0026 (5) | 0.0057 (4) | 0.0076 (5) |
O3 | 0.1000 (12) | 0.0798 (11) | 0.0528 (8) | 0.0023 (9) | 0.0455 (8) | 0.0096 (7) |
O4 | 0.0462 (7) | 0.0716 (10) | 0.0697 (9) | −0.0159 (7) | 0.0130 (7) | 0.0056 (7) |
O5 | 0.0981 (11) | 0.0404 (8) | 0.0562 (8) | 0.0018 (7) | 0.0359 (8) | 0.0126 (6) |
O6 | 0.0926 (11) | 0.0442 (7) | 0.0451 (7) | 0.0092 (7) | 0.0330 (7) | −0.0009 (5) |
Cl1 | 0.0427 (3) | 0.1053 (5) | 0.0794 (4) | −0.0208 (3) | 0.0046 (2) | 0.0005 (3) |
C1—C2 | 1.374 (3) | C13—N2 | 1.405 (2) |
C1—C9 | 1.384 (2) | C14—O3 | 1.217 (2) |
C1—H1 | 0.9300 | C14—N2 | 1.364 (3) |
C2—C3 | 1.380 (3) | C14—N1 | 1.379 (2) |
C2—H2 | 0.9300 | C15—C16 | 1.383 (2) |
C3—C4 | 1.369 (3) | C15—C20 | 1.391 (2) |
C3—H3 | 0.9300 | C16—C17 | 1.379 (3) |
C4—C5 | 1.388 (2) | C16—H16 | 0.9300 |
C4—H4 | 0.9300 | C17—C18 | 1.372 (3) |
C5—O1 | 1.3639 (18) | C17—H17 | 0.9300 |
C5—C9 | 1.387 (2) | C18—C19 | 1.366 (3) |
C6—O1 | 1.4280 (18) | C18—Cl1 | 1.7408 (18) |
C6—C7 | 1.526 (2) | C19—C20 | 1.377 (3) |
C6—H6A | 0.9700 | C19—H19 | 0.9300 |
C6—H6B | 0.9700 | C20—H20 | 0.9300 |
C7—C23 | 1.519 (2) | C21—N1 | 1.464 (2) |
C7—C10 | 1.541 (2) | C21—H21A | 0.9600 |
C7—C8 | 1.547 (2) | C21—H21B | 0.9600 |
C8—C9 | 1.509 (2) | C21—H21C | 0.9600 |
C8—C12 | 1.516 (2) | C22—N2 | 1.468 (2) |
C8—H8 | 0.9800 | C22—H22A | 0.9600 |
C10—O2 | 1.4471 (17) | C22—H22B | 0.9600 |
C10—C15 | 1.502 (2) | C22—H22C | 0.9600 |
C10—H10 | 0.9800 | C23—O5 | 1.183 (2) |
C11—C12 | 1.341 (2) | C23—O6 | 1.328 (2) |
C11—O2 | 1.3416 (19) | C24—O6 | 1.444 (2) |
C11—N1 | 1.3734 (19) | C24—H24A | 0.9600 |
C12—C13 | 1.442 (2) | C24—H24B | 0.9600 |
C13—O4 | 1.214 (2) | C24—H24C | 0.9600 |
C2—C1—C9 | 121.17 (17) | O3—C14—N2 | 122.88 (19) |
C2—C1—H1 | 119.4 | O3—C14—N1 | 121.4 (2) |
C9—C1—H1 | 119.4 | N2—C14—N1 | 115.75 (15) |
C1—C2—C3 | 119.86 (17) | C16—C15—C20 | 118.39 (16) |
C1—C2—H2 | 120.1 | C16—C15—C10 | 121.91 (14) |
C3—C2—H2 | 120.1 | C20—C15—C10 | 119.70 (15) |
C4—C3—C2 | 120.16 (17) | C17—C16—C15 | 120.49 (16) |
C4—C3—H3 | 119.9 | C17—C16—H16 | 119.8 |
C2—C3—H3 | 119.9 | C15—C16—H16 | 119.8 |
C3—C4—C5 | 119.75 (17) | C18—C17—C16 | 119.64 (18) |
C3—C4—H4 | 120.1 | C18—C17—H17 | 120.2 |
C5—C4—H4 | 120.1 | C16—C17—H17 | 120.2 |
O1—C5—C9 | 123.41 (14) | C19—C18—C17 | 121.26 (17) |
O1—C5—C4 | 115.80 (15) | C19—C18—Cl1 | 119.39 (14) |
C9—C5—C4 | 120.79 (15) | C17—C18—Cl1 | 119.35 (15) |
O1—C6—C7 | 114.40 (12) | C18—C19—C20 | 118.93 (17) |
O1—C6—H6A | 108.7 | C18—C19—H19 | 120.5 |
C7—C6—H6A | 108.7 | C20—C19—H19 | 120.5 |
O1—C6—H6B | 108.7 | C19—C20—C15 | 121.28 (17) |
C7—C6—H6B | 108.7 | C19—C20—H20 | 119.4 |
H6A—C6—H6B | 107.6 | C15—C20—H20 | 119.4 |
C23—C7—C6 | 109.42 (12) | N1—C21—H21A | 109.5 |
C23—C7—C10 | 108.69 (12) | N1—C21—H21B | 109.5 |
C6—C7—C10 | 111.56 (12) | H21A—C21—H21B | 109.5 |
C23—C7—C8 | 109.90 (12) | N1—C21—H21C | 109.5 |
C6—C7—C8 | 109.47 (12) | H21A—C21—H21C | 109.5 |
C10—C7—C8 | 107.78 (11) | H21B—C21—H21C | 109.5 |
C9—C8—C12 | 115.51 (12) | N2—C22—H22A | 109.5 |
C9—C8—C7 | 107.36 (12) | N2—C22—H22B | 109.5 |
C12—C8—C7 | 108.51 (12) | H22A—C22—H22B | 109.5 |
C9—C8—H8 | 108.4 | N2—C22—H22C | 109.5 |
C12—C8—H8 | 108.4 | H22A—C22—H22C | 109.5 |
C7—C8—H8 | 108.4 | H22B—C22—H22C | 109.5 |
C1—C9—C5 | 118.19 (15) | O5—C23—O6 | 123.51 (15) |
C1—C9—C8 | 121.53 (14) | O5—C23—C7 | 124.85 (15) |
C5—C9—C8 | 120.18 (13) | O6—C23—C7 | 111.63 (13) |
O2—C10—C15 | 105.79 (12) | O6—C24—H24A | 109.5 |
O2—C10—C7 | 109.87 (11) | O6—C24—H24B | 109.5 |
C15—C10—C7 | 116.24 (12) | H24A—C24—H24B | 109.5 |
O2—C10—H10 | 108.2 | O6—C24—H24C | 109.5 |
C15—C10—H10 | 108.2 | H24A—C24—H24C | 109.5 |
C7—C10—H10 | 108.2 | H24B—C24—H24C | 109.5 |
C12—C11—O2 | 125.41 (13) | C11—N1—C14 | 121.08 (15) |
C12—C11—N1 | 123.77 (15) | C11—N1—C21 | 120.78 (15) |
O2—C11—N1 | 110.80 (14) | C14—N1—C21 | 118.08 (15) |
C11—C12—C13 | 117.48 (14) | C14—N2—C13 | 125.05 (15) |
C11—C12—C8 | 120.89 (13) | C14—N2—C22 | 117.44 (17) |
C13—C12—C8 | 121.44 (14) | C13—N2—C22 | 116.43 (18) |
O4—C13—N2 | 119.60 (16) | C5—O1—C6 | 119.44 (12) |
O4—C13—C12 | 124.74 (16) | C11—O2—C10 | 116.93 (12) |
N2—C13—C12 | 115.66 (16) | C23—O6—C24 | 116.01 (16) |
C9—C1—C2—C3 | −2.2 (3) | O2—C10—C15—C20 | −141.61 (15) |
C1—C2—C3—C4 | 0.0 (3) | C7—C10—C15—C20 | 96.17 (18) |
C2—C3—C4—C5 | 0.9 (3) | C20—C15—C16—C17 | −0.8 (3) |
C3—C4—C5—O1 | −178.52 (17) | C10—C15—C16—C17 | 179.57 (16) |
C3—C4—C5—C9 | 0.5 (3) | C15—C16—C17—C18 | 0.2 (3) |
O1—C6—C7—C23 | −68.32 (16) | C16—C17—C18—C19 | 0.1 (3) |
O1—C6—C7—C10 | 171.38 (12) | C16—C17—C18—Cl1 | −179.90 (16) |
O1—C6—C7—C8 | 52.18 (16) | C17—C18—C19—C20 | 0.3 (3) |
C23—C7—C8—C9 | 65.52 (15) | Cl1—C18—C19—C20 | −179.69 (16) |
C6—C7—C8—C9 | −54.69 (15) | C18—C19—C20—C15 | −1.0 (3) |
C10—C7—C8—C9 | −176.20 (11) | C16—C15—C20—C19 | 1.3 (3) |
C23—C7—C8—C12 | −169.00 (12) | C10—C15—C20—C19 | −179.14 (17) |
C6—C7—C8—C12 | 70.80 (14) | C6—C7—C23—O5 | −1.3 (2) |
C10—C7—C8—C12 | −50.71 (15) | C10—C7—C23—O5 | 120.72 (18) |
C2—C1—C9—C5 | 3.5 (3) | C8—C7—C23—O5 | −121.56 (18) |
C2—C1—C9—C8 | 179.82 (17) | C6—C7—C23—O6 | 179.19 (14) |
O1—C5—C9—C1 | 176.26 (16) | C10—C7—C23—O6 | −58.77 (17) |
C4—C5—C9—C1 | −2.7 (2) | C8—C7—C23—O6 | 58.96 (17) |
O1—C5—C9—C8 | −0.1 (2) | C12—C11—N1—C14 | 0.7 (3) |
C4—C5—C9—C8 | −178.98 (15) | O2—C11—N1—C14 | −177.63 (15) |
C12—C8—C9—C1 | 93.78 (18) | C12—C11—N1—C21 | −176.51 (17) |
C7—C8—C9—C1 | −145.05 (15) | O2—C11—N1—C21 | 5.2 (2) |
C12—C8—C9—C5 | −90.03 (17) | O3—C14—N1—C11 | 178.87 (17) |
C7—C8—C9—C5 | 31.15 (19) | N2—C14—N1—C11 | −0.2 (2) |
C23—C7—C10—O2 | −178.60 (12) | O3—C14—N1—C21 | −3.9 (3) |
C6—C7—C10—O2 | −57.87 (15) | N2—C14—N1—C21 | 177.04 (16) |
C8—C7—C10—O2 | 62.33 (15) | O3—C14—N2—C13 | 173.81 (18) |
C23—C7—C10—C15 | −58.56 (16) | N1—C14—N2—C13 | −7.1 (3) |
C6—C7—C10—C15 | 62.17 (16) | O3—C14—N2—C22 | 6.2 (3) |
C8—C7—C10—C15 | −177.63 (12) | N1—C14—N2—C22 | −174.76 (19) |
O2—C11—C12—C13 | −176.39 (15) | O4—C13—N2—C14 | −167.39 (18) |
N1—C11—C12—C13 | 5.6 (2) | C12—C13—N2—C14 | 13.1 (3) |
O2—C11—C12—C8 | −1.2 (2) | O4—C13—N2—C22 | 0.4 (3) |
N1—C11—C12—C8 | −179.28 (14) | C12—C13—N2—C22 | −179.16 (18) |
C9—C8—C12—C11 | 142.93 (15) | C9—C5—O1—C6 | −6.3 (2) |
C7—C8—C12—C11 | 22.38 (19) | C4—C5—O1—C6 | 172.70 (14) |
C9—C8—C12—C13 | −42.1 (2) | C7—C6—O1—C5 | −21.03 (19) |
C7—C8—C12—C13 | −162.66 (14) | C12—C11—O2—C10 | 11.6 (2) |
C11—C12—C13—O4 | 168.86 (17) | N1—C11—O2—C10 | −170.11 (13) |
C8—C12—C13—O4 | −6.3 (3) | C15—C10—O2—C11 | −168.67 (13) |
C11—C12—C13—N2 | −11.6 (2) | C7—C10—O2—C11 | −42.47 (17) |
C8—C12—C13—N2 | 173.23 (14) | O5—C23—O6—C24 | −3.5 (3) |
O2—C10—C15—C16 | 38.0 (2) | C7—C23—O6—C24 | 176.02 (19) |
C7—C10—C15—C16 | −84.24 (19) |
Cg4 is the centroid of the C1–C5/C9 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16···O3i | 0.93 | 2.44 | 3.349 (2) | 166 |
C19—H19···Cg4ii | 0.93 | 2.84 | 3.720 (3) | 158 |
Symmetry codes: (i) −x+1, −y, −z; (ii) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C24H21ClN2O6 |
Mr | 468.88 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 10.6177 (5), 11.9973 (5), 17.5532 (8) |
β (°) | 99.751 (2) |
V (Å3) | 2203.69 (17) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.22 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.924, 0.951 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 29343, 7232, 4518 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.739 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.158, 1.03 |
No. of reflections | 7232 |
No. of parameters | 301 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.42, −0.60 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
Cg4 is the centroid of the C1–C5/C9 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16···O3i | 0.93 | 2.44 | 3.349 (2) | 166 |
C19—H19···Cg4ii | 0.93 | 2.84 | 3.720 (3) | 158 |
Symmetry codes: (i) −x+1, −y, −z; (ii) x−1, y, z. |
References
Alam, O., Imran, M. & Khan, S. A. (2005). Indian J. Heterocycl. Chem. 14, 293–296. CAS Google Scholar
Booysen, I., Muhammed, I., Soares, A., Gerber, T., Hosten, E. & Betz, R. (2011). Acta Cryst. E67, o1592. Web of Science CSD CrossRef IUCr Journals Google Scholar
Bruker (2004). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Condon, M. E., Brady, T. E., Feist, D., Malefyt, T., Marc, P., Quakenbush, L. S., Rodaway, S. J., Shaner, D. L. & Tecle, B. (1993). Brighton Crop Protection Conference–Weeds, pp. 41–46. Google Scholar
Kappe, C. O. (2000). Acc. Chem. Res. 33, 879–888. Web of Science CrossRef PubMed CAS Google Scholar
Leite, A. C. L., Lima, R. S., Moreira, D. R. M., Cardoso, M. V. O., Brito, A. C. G., Santos, L. M. F., Hernandes, M. Z., Kiperstok, A. C., Lima, R. S. & Soares, M. B. P. (2006). Bioorg. Med. Chem. 14, 3749–3757. Web of Science CrossRef PubMed CAS Google Scholar
Noroozi Pesyan, N., Rastgar, S. & Hosseini, Y. (2009). Acta Cryst. E65, o1444. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rovnyak, G. C., Kimball, S. D., Beyer, B., Cucinotta, G., DiMarco, J. D., Gougoutas, J., Hedberg, A., Malley, M., McCarthy, J. P., Zhang, R. & Moreland, S. (1995). J. Med. Chem. 38, 119–129. CSD CrossRef CAS PubMed Web of Science Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sriram, D., Yogeeswari, P. & Devakaram, R. V. (2006). Bioorg. Med. Chem. 14, 3113–3118. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyrimidine derivatives are used in the areas of pesticide and pharmaceutical agents (Condon et al., 1993). In addition, pyrimidine-2(1H)-ones/thiones are calcium channel blocker compounds (Rovnyak et al., 1995). They also have other biological activities such as antibacterial, antifungal and antiviral (Kappe, 2000; Alam et al., 2005; Sriram et al., 2006; Leite et al., 2006).
The geometric parameters of the title molecule (Fig. 1) agree well with reported similar structure (Booysen et al., 2011; Noroozi Pesyan et al., 2009). The sum of bond angles around N1 and N2 [359.93 (15) and 358.92°, respectively] indicates the sp2 hybridization state of atoms N1 and N2 in the molecule. The crystal packing is controlled by weak intermolecular C—H···O and C—H···π interactions (Table 1).