metal-organic compounds
catena-Poly[[(aqualithium)-μ-3-carboxypyrazine-2-carboxylato-κ4O2,N1:O3,N4] monohydrate]
aInstitute of Nuclear Chemistry and Technology, ul.Dorodna 16, 03-195 Warszawa, Poland
*Correspondence e-mail: j.leciejewicz@ichtj.waw.pl
The polymeric structure of the title compound {[Li(C6H3N2O4)(H2O)]·H2O}n, contains two symmetry-independent LiI complex units, both having distorted trigonal–bipyramidal coordination environments. The LiI ions are bridged by both the N and O atoms of the ligands, generating two symmetry-independent polymeric chains propagating along the b-axis direction. In both ligands, the second carboxylato O atom remains protonated, serving as a donor in a short intramolecular O—H⋯O hydrogen bond. The coordination of each LiI ion is completed by a water O atom. The ribbons are held together by a network of O—H⋯O hydrogen bonds in which the coordinated and uncoordinated water molecules are donors and the carboxylato O atoms act as acceptors.
Related literature
For the crystal structures of two LiI complexes with a pyrazine-2,3-dicarboxylate ligand, see: Tombul et al. (2008); Tombul & Güven (2009). For the of a LiI complex with a pyrazine-2,3,5,6-tetracarboxylate ligand, see: Starosta & Leciejewicz (2010) and a pyrazine-2,5-dicarboxylate ligand, see: Starosta & Leciejewicz (2011). For the crystal structures of two structural forms of pyrazine-2,3-dicarboxylic acid dihydrate, see: Takusagawa & Shimada (1973); Premkumar et al. (2004). For the crystal structures of Zn complexes with a pyrazine-2,3-dicarboxylate ligand, see: Richard et al. (1974); Ptasiewicz-Bąk & Leciejewicz (1999); Gryz et al. (2005).
Experimental
Crystal data
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Data collection
Refinement
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Data collection: KM-4 Software (Kuma, 1996); cell KM-4 Software; data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053681102887X/kp2344sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681102887X/kp2344Isup2.hkl
A solution of 2 mmol s of LiOH in 50 mL of doubly distilled cold water was titrated with an aqueous solution of pyrazine-2,3-dicarboxylic acid dihydrate until the pH reached the value of 5.5. Then, the solution was boiled under reflux with stirring for 6 h. After cooling to room temperature the solution was left to crystallise. Polycrystalline material which was found after evaporation to dryness was repeatedly recrystallised from cold water until single-crystal plates appeared. They were washed with methanol and dried in air.
Water hydrogen atoms were located in a difference map and refined isotropically. H atoms attached to pyrazine-ring C atoms were positioned at calculated positions and were treated as riding on the parent atoms with C-H=0.93\%A and UUISO(H)=1.2UISO(C).
Data collection: KM-4 Software (Kuma, 1996); cell
KM-4 Software (Kuma, 1996); data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Two structural units of the title compound with atom labelling scheme and 50% probability displacement ellipsoids. Symmetry code: (i) -x, y - 1/2,-z + 3/2; (ii) -x + 1, y + 1/2, -z + 3/2; (iii) -x + 1, y - 1/2, -z + 3/2; (iv) -x, y + 1/2, -z + 3/2. | |
Fig. 2. Packing diagram of the structure viewed along the b axis. |
[Li(C6H3N2O4)(H2O)]·H2O | F(000) = 864 |
Mr = 210.08 | Dx = 1.593 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 12.673 (3) Å | θ = 6–15° |
b = 13.816 (3) Å | µ = 0.14 mm−1 |
c = 10.956 (2) Å | T = 293 K |
β = 114.04 (3)° | Plates, colourless |
V = 1752.0 (6) Å3 | 0.32 × 0.14 × 0.09 mm |
Z = 8 |
Kuma KM4 four-circle diffractometer | 1811 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.064 |
Graphite monochromator | θmax = 27.7°, θmin = 1.8° |
profile data from ω/2θ scans | h = 0→14 |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008) | k = −18→0 |
Tmin = 0.978, Tmax = 0.984 | l = −13→13 |
3775 measured reflections | 3 standard reflections every 200 reflections |
3595 independent reflections | intensity decay: 3.4% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.149 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.94 | w = 1/[σ2(Fo2) + (0.0987P)2] where P = (Fo2 + 2Fc2)/3 |
3595 reflections | (Δ/σ)max < 0.001 |
311 parameters | Δρmax = 0.28 e Å−3 |
0 restraints | Δρmin = −0.36 e Å−3 |
[Li(C6H3N2O4)(H2O)]·H2O | V = 1752.0 (6) Å3 |
Mr = 210.08 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.673 (3) Å | µ = 0.14 mm−1 |
b = 13.816 (3) Å | T = 293 K |
c = 10.956 (2) Å | 0.32 × 0.14 × 0.09 mm |
β = 114.04 (3)° |
Kuma KM4 four-circle diffractometer | 1811 reflections with I > 2σ(I) |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008) | Rint = 0.064 |
Tmin = 0.978, Tmax = 0.984 | 3 standard reflections every 200 reflections |
3775 measured reflections | intensity decay: 3.4% |
3595 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.149 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.94 | Δρmax = 0.28 e Å−3 |
3595 reflections | Δρmin = −0.36 e Å−3 |
311 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N11 | −0.01503 (17) | 0.17705 (13) | 0.7604 (2) | 0.0323 (5) | |
N12 | 0.00129 (18) | −0.02194 (13) | 0.7752 (2) | 0.0325 (5) | |
O14 | 0.1043 (2) | −0.12689 (12) | 0.6604 (2) | 0.0553 (6) | |
C13 | 0.0533 (2) | 0.02779 (15) | 0.7099 (2) | 0.0283 (5) | |
O13 | 0.17126 (19) | −0.00377 (13) | 0.5878 (2) | 0.0544 (6) | |
O11 | 0.07742 (16) | 0.28612 (11) | 0.6413 (2) | 0.0462 (5) | |
O12 | 0.1688 (2) | 0.16941 (14) | 0.5894 (2) | 0.0540 (6) | |
C17 | 0.1009 (2) | 0.19946 (16) | 0.6398 (3) | 0.0351 (6) | |
C12 | 0.0454 (2) | 0.12986 (15) | 0.7036 (2) | 0.0282 (5) | |
C18 | 0.1147 (2) | −0.03926 (17) | 0.6484 (3) | 0.0354 (6) | |
C15 | −0.0584 (2) | 0.02637 (18) | 0.8300 (3) | 0.0376 (6) | |
H15 | −0.0953 | −0.0075 | 0.8747 | 0.045* | |
C16 | −0.0671 (2) | 0.12673 (18) | 0.8224 (3) | 0.0372 (6) | |
H16 | −0.1101 | 0.1588 | 0.8614 | 0.045* | |
O21 | 0.41371 (16) | 0.10101 (11) | 0.8670 (2) | 0.0406 (5) | |
N22 | 0.51761 (17) | 0.40335 (13) | 0.7446 (2) | 0.0318 (5) | |
O24 | 0.39022 (18) | 0.51517 (11) | 0.8178 (2) | 0.0496 (6) | |
O22 | 0.33218 (18) | 0.22600 (12) | 0.9203 (2) | 0.0523 (6) | |
N21 | 0.53363 (18) | 0.20579 (13) | 0.7753 (2) | 0.0345 (5) | |
O23 | 0.3238 (2) | 0.40041 (15) | 0.9029 (3) | 0.0603 (7) | |
C28 | 0.3850 (2) | 0.42871 (16) | 0.8427 (3) | 0.0374 (6) | |
C22 | 0.4624 (2) | 0.25575 (15) | 0.8148 (2) | 0.0271 (5) | |
C23 | 0.4556 (2) | 0.35762 (14) | 0.8001 (2) | 0.0271 (5) | |
C27 | 0.3966 (2) | 0.18992 (16) | 0.8712 (3) | 0.0324 (6) | |
C26 | 0.5974 (2) | 0.25337 (17) | 0.7252 (3) | 0.0404 (7) | |
H26 | 0.6494 | 0.2196 | 0.7009 | 0.048* | |
C25 | 0.5878 (2) | 0.35298 (17) | 0.7085 (3) | 0.0383 (6) | |
H25 | 0.6321 | 0.3847 | 0.6708 | 0.046* | |
Li2 | 0.5322 (4) | 0.0529 (3) | 0.8042 (4) | 0.0371 (10) | |
O25 | 0.66173 (18) | 0.02579 (12) | 0.9834 (2) | 0.0389 (5) | |
O1 | 0.2117 (2) | 0.38123 (13) | 0.5402 (2) | 0.0502 (6) | |
O15 | −0.1887 (2) | 0.31162 (16) | 0.5473 (2) | 0.0532 (6) | |
Li1 | −0.0422 (4) | 0.3254 (3) | 0.7089 (5) | 0.0416 (10) | |
O2 | 0.71760 (19) | 0.12508 (13) | 0.5331 (2) | 0.0459 (5) | |
H3 | 0.695 (3) | 0.092 (2) | 0.581 (3) | 0.043 (9)* | |
H4 | 0.754 (3) | 0.092 (3) | 0.488 (4) | 0.080 (12)* | |
H251 | 0.707 (3) | −0.009 (2) | 0.961 (3) | 0.055 (9)* | |
H252 | 0.633 (3) | −0.004 (3) | 1.033 (3) | 0.064 (11)* | |
H152 | −0.252 (3) | 0.355 (3) | 0.538 (4) | 0.083 (12)* | |
H151 | −0.223 (5) | 0.268 (5) | 0.534 (7) | 0.15 (3)* | |
H131 | 0.183 (5) | 0.115 (4) | 0.590 (6) | 0.15 (2)* | |
H231 | 0.329 (5) | 0.353 (4) | 0.916 (5) | 0.12 (2)* | |
H1 | 0.169 (2) | 0.354 (2) | 0.568 (3) | 0.032 (8)* | |
H2 | 0.248 (3) | 0.342 (3) | 0.501 (4) | 0.079 (12)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N11 | 0.0411 (12) | 0.0160 (9) | 0.0441 (12) | 0.0021 (8) | 0.0218 (10) | 0.0018 (8) |
N12 | 0.0398 (11) | 0.0159 (9) | 0.0466 (13) | 0.0001 (8) | 0.0227 (10) | 0.0039 (8) |
O14 | 0.0881 (15) | 0.0120 (8) | 0.0887 (16) | −0.0007 (9) | 0.0594 (13) | −0.0029 (9) |
C13 | 0.0363 (13) | 0.0097 (10) | 0.0397 (13) | 0.0019 (9) | 0.0163 (11) | 0.0003 (9) |
O13 | 0.0865 (15) | 0.0181 (9) | 0.0901 (16) | 0.0039 (9) | 0.0680 (14) | 0.0005 (9) |
O11 | 0.0621 (12) | 0.0096 (8) | 0.0848 (15) | 0.0024 (8) | 0.0482 (12) | 0.0064 (8) |
O12 | 0.0775 (15) | 0.0164 (9) | 0.0968 (17) | 0.0029 (9) | 0.0648 (14) | 0.0060 (10) |
C17 | 0.0456 (14) | 0.0131 (10) | 0.0541 (17) | 0.0001 (10) | 0.0279 (13) | 0.0036 (10) |
C12 | 0.0354 (13) | 0.0127 (10) | 0.0380 (13) | 0.0035 (9) | 0.0164 (11) | 0.0023 (9) |
C18 | 0.0506 (16) | 0.0155 (11) | 0.0486 (15) | 0.0026 (10) | 0.0288 (13) | −0.0020 (10) |
C15 | 0.0490 (15) | 0.0209 (12) | 0.0519 (16) | 0.0001 (11) | 0.0298 (13) | 0.0058 (11) |
C16 | 0.0474 (15) | 0.0234 (12) | 0.0483 (15) | 0.0073 (11) | 0.0272 (13) | 0.0054 (11) |
O21 | 0.0552 (11) | 0.0099 (7) | 0.0693 (13) | 0.0023 (7) | 0.0383 (10) | 0.0053 (7) |
N22 | 0.0382 (12) | 0.0162 (9) | 0.0433 (12) | 0.0031 (8) | 0.0187 (10) | 0.0052 (8) |
O24 | 0.0805 (14) | 0.0101 (8) | 0.0791 (15) | 0.0036 (8) | 0.0538 (12) | 0.0022 (8) |
O22 | 0.0747 (14) | 0.0180 (8) | 0.0953 (16) | 0.0062 (9) | 0.0666 (13) | 0.0091 (9) |
N21 | 0.0464 (12) | 0.0153 (9) | 0.0504 (13) | 0.0069 (9) | 0.0286 (11) | 0.0053 (9) |
O23 | 0.0965 (19) | 0.0157 (9) | 0.1049 (19) | 0.0075 (10) | 0.0781 (16) | 0.0063 (10) |
C28 | 0.0554 (17) | 0.0122 (10) | 0.0566 (17) | 0.0037 (10) | 0.0352 (14) | 0.0018 (10) |
C22 | 0.0348 (13) | 0.0119 (10) | 0.0377 (14) | 0.0031 (9) | 0.0182 (11) | 0.0038 (9) |
C23 | 0.0343 (12) | 0.0112 (10) | 0.0388 (14) | 0.0022 (9) | 0.0179 (11) | 0.0020 (9) |
C27 | 0.0399 (14) | 0.0161 (10) | 0.0458 (15) | 0.0021 (10) | 0.0223 (12) | 0.0058 (10) |
C26 | 0.0515 (16) | 0.0216 (12) | 0.0630 (18) | 0.0098 (11) | 0.0386 (15) | 0.0085 (11) |
C25 | 0.0473 (15) | 0.0238 (13) | 0.0537 (17) | 0.0024 (11) | 0.0307 (14) | 0.0100 (11) |
Li2 | 0.052 (3) | 0.0131 (17) | 0.053 (3) | 0.0028 (17) | 0.028 (2) | 0.0018 (17) |
O25 | 0.0508 (12) | 0.0159 (8) | 0.0592 (13) | 0.0004 (8) | 0.0319 (10) | −0.0022 (8) |
O1 | 0.0647 (14) | 0.0193 (9) | 0.0889 (17) | −0.0108 (9) | 0.0540 (13) | −0.0094 (10) |
O15 | 0.0506 (13) | 0.0231 (10) | 0.0787 (16) | 0.0043 (10) | 0.0190 (11) | 0.0035 (10) |
Li1 | 0.056 (3) | 0.0126 (19) | 0.065 (3) | 0.0019 (17) | 0.033 (2) | 0.0019 (18) |
O2 | 0.0672 (14) | 0.0219 (9) | 0.0581 (13) | −0.0051 (9) | 0.0351 (12) | −0.0045 (9) |
N11—C16 | 1.321 (3) | O24—C28 | 1.233 (3) |
N11—C12 | 1.337 (3) | Li2—O24ii | 2.024 (5) |
Li1—O11 | 2.014 (5) | O22—C27 | 1.250 (3) |
Li1—N11 | 2.117 (4) | N21—C26 | 1.322 (3) |
Li1—O15 | 1.985 (6) | N21—C22 | 1.340 (3) |
Li1—O14i | 2.005 (5) | O23—C28 | 1.267 (3) |
Li1—N12i | 2.162 (4) | O23—H231 | 0.67 (6) |
N12—C15 | 1.322 (3) | C28—C23 | 1.524 (3) |
N12—C13 | 1.342 (3) | C22—C23 | 1.415 (3) |
Li1—N12i | 2.162 (4) | C22—C27 | 1.525 (3) |
O14—C18 | 1.231 (3) | C26—C25 | 1.387 (3) |
Li1—O14i | 2.005 (5) | C26—H26 | 0.9300 |
C13—C12 | 1.413 (3) | C25—H25 | 0.9300 |
C13—C18 | 1.531 (3) | Li2—O21 | 2.003 (5) |
O13—C18 | 1.258 (3) | Li2—N21 | 2.138 (4) |
O11—C17 | 1.235 (3) | Li2—O25 | 2.016 (5) |
O12—C17 | 1.267 (3) | Li2—O24ii | 2.024 (5) |
O12—H131 | 0.78 (6) | Li2—N22ii | 2.162 (4) |
C17—C12 | 1.519 (3) | O25—H251 | 0.86 (3) |
C15—C16 | 1.391 (3) | O25—H252 | 0.87 (4) |
C15—H15 | 0.9300 | O1—H1 | 0.82 (3) |
C16—H16 | 0.9300 | O1—H2 | 0.91 (4) |
O21—C27 | 1.251 (3) | O15—H152 | 0.97 (4) |
N22—C25 | 1.312 (3) | O15—H151 | 0.72 (6) |
N22—C23 | 1.333 (3) | O2—H3 | 0.83 (3) |
Li2—N22ii | 2.162 (4) | O2—H4 | 0.93 (4) |
C16—N11—C12 | 118.9 (2) | C23—C22—C27 | 128.4 (2) |
C16—N11—Li1 | 125.8 (2) | N22—C23—C22 | 120.2 (2) |
C12—N11—Li1 | 114.20 (19) | N22—C23—C28 | 111.30 (18) |
C15—N12—C13 | 118.65 (19) | C22—C23—C28 | 128.5 (2) |
C15—N12—Li1iii | 128.2 (2) | O22—C27—O21 | 124.1 (2) |
C13—N12—Li1iii | 112.88 (19) | O22—C27—C22 | 119.8 (2) |
C18—O14—Li1iii | 119.3 (2) | O21—C27—C22 | 116.0 (2) |
N12—C13—C12 | 119.8 (2) | N21—C26—C25 | 120.8 (2) |
N12—C13—C18 | 111.86 (18) | N21—C26—H26 | 119.6 |
C12—C13—C18 | 128.4 (2) | C25—C26—H26 | 119.6 |
C17—O11—Li1 | 119.2 (2) | N22—C25—C26 | 121.3 (2) |
C17—O12—H131 | 121 (5) | N22—C25—H25 | 119.3 |
O11—C17—O12 | 122.2 (2) | C26—C25—H25 | 119.3 |
O11—C17—C12 | 116.6 (2) | O21—Li2—O25 | 98.9 (2) |
O12—C17—C12 | 121.1 (2) | O21—Li2—O24ii | 161.1 (3) |
N11—C12—C13 | 120.4 (2) | O25—Li2—O24ii | 100.0 (2) |
N11—C12—C17 | 111.46 (18) | O21—Li2—N21 | 77.02 (15) |
C13—C12—C17 | 128.1 (2) | O25—Li2—N21 | 106.0 (2) |
O14—C18—O13 | 123.3 (2) | O24ii—Li2—N21 | 96.94 (19) |
O14—C18—C13 | 116.9 (2) | O21—Li2—N22ii | 102.6 (2) |
O13—C18—C13 | 119.8 (2) | O25—Li2—N22ii | 95.94 (17) |
N12—C15—C16 | 121.5 (2) | O24ii—Li2—N22ii | 76.26 (15) |
N12—C15—H15 | 119.3 | N21—Li2—N22ii | 157.9 (3) |
C16—C15—H15 | 119.3 | Li2—O25—H251 | 101 (2) |
N11—C16—C15 | 120.7 (2) | Li2—O25—H252 | 108 (2) |
N11—C16—H16 | 119.6 | H251—O25—H252 | 114 (3) |
C15—C16—H16 | 119.6 | H1—O1—H2 | 116 (3) |
C27—O21—Li2 | 120.3 (2) | Li1—O15—H152 | 118 (2) |
C25—N22—C23 | 119.0 (2) | Li1—O15—H151 | 122 (5) |
C25—N22—Li2iv | 126.7 (2) | H152—O15—H151 | 96 (5) |
C23—N22—Li2iv | 113.48 (19) | O15—Li1—O14i | 99.9 (2) |
C28—O24—Li2iv | 118.7 (2) | O15—Li1—O11 | 102.5 (2) |
C26—N21—C22 | 118.94 (19) | O14i—Li1—O11 | 157.6 (3) |
C26—N21—Li2 | 126.6 (2) | O15—Li1—N11 | 97.8 (2) |
C22—N21—Li2 | 114.44 (19) | O14i—Li1—N11 | 101.3 (2) |
C28—O23—H231 | 113 (5) | O11—Li1—N11 | 76.82 (16) |
O24—C28—O23 | 120.9 (2) | O15—Li1—N12i | 105.8 (2) |
O24—C28—C23 | 117.7 (2) | O14i—Li1—N12i | 76.87 (16) |
O23—C28—C23 | 121.3 (2) | O11—Li1—N12i | 95.81 (19) |
N21—C22—C23 | 119.6 (2) | N11—Li1—N12i | 156.3 (3) |
N21—C22—C27 | 112.03 (19) | H3—O2—H4 | 116 (3) |
Symmetry codes: (i) −x, y+1/2, −z+3/2; (ii) −x+1, y−1/2, −z+3/2; (iii) −x, y−1/2, −z+3/2; (iv) −x+1, y+1/2, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H3···O24ii | 0.83 (3) | 2.12 (4) | 2.943 (3) | 170 (3) |
O2—H4···O13v | 0.93 (4) | 1.93 (4) | 2.841 (3) | 169 (3) |
O25—H251···O1ii | 0.86 (3) | 1.83 (4) | 2.640 (3) | 155 (3) |
O25—H252···O21vi | 0.87 (4) | 1.97 (4) | 2.819 (3) | 166 (3) |
O15—H152···O25vii | 0.97 (4) | 1.93 (4) | 2.837 (3) | 154 (3) |
O15—H151···O2viii | 0.72 (6) | 2.11 (6) | 2.816 (3) | 165 (7) |
O12—H131···O13 | 0.78 (6) | 1.64 (6) | 2.393 (3) | 162 (7) |
O23—H231···O22 | 0.67 (6) | 1.76 (6) | 2.416 (3) | 170 (7) |
O1—H1···O11 | 0.82 (3) | 1.90 (3) | 2.717 (3) | 176 (3) |
O1—H2···O22ix | 0.91 (4) | 1.90 (4) | 2.808 (3) | 174 (3) |
Symmetry codes: (ii) −x+1, y−1/2, −z+3/2; (v) −x+1, −y, −z+1; (vi) −x+1, −y, −z+2; (vii) x−1, −y+1/2, z−1/2; (viii) x−1, y, z; (ix) x, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Li(C6H3N2O4)(H2O)]·H2O |
Mr | 210.08 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 12.673 (3), 13.816 (3), 10.956 (2) |
β (°) | 114.04 (3) |
V (Å3) | 1752.0 (6) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.32 × 0.14 × 0.09 |
Data collection | |
Diffractometer | Kuma KM4 four-circle diffractometer |
Absorption correction | Analytical (CrysAlis RED; Oxford Diffraction, 2008) |
Tmin, Tmax | 0.978, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3775, 3595, 1811 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.654 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.149, 0.94 |
No. of reflections | 3595 |
No. of parameters | 311 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.28, −0.36 |
Computer programs: KM-4 Software (Kuma, 1996), DATAPROC (Kuma, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Li1—O11 | 2.014 (5) | Li2—O21 | 2.003 (5) |
Li1—N11 | 2.117 (4) | Li2—N21 | 2.138 (4) |
Li1—O15 | 1.985 (6) | Li2—O25 | 2.016 (5) |
Li1—O14i | 2.005 (5) | Li2—O24ii | 2.024 (5) |
Li1—N12i | 2.162 (4) | Li2—N22ii | 2.162 (4) |
Symmetry codes: (i) −x, y+1/2, −z+3/2; (ii) −x+1, y−1/2, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H3···O24ii | 0.83 (3) | 2.12 (4) | 2.943 (3) | 170 (3) |
O2—H4···O13iii | 0.93 (4) | 1.93 (4) | 2.841 (3) | 169 (3) |
O25—H251···O1ii | 0.86 (3) | 1.83 (4) | 2.640 (3) | 155 (3) |
O25—H252···O21iv | 0.87 (4) | 1.97 (4) | 2.819 (3) | 166 (3) |
O15—H152···O25v | 0.97 (4) | 1.93 (4) | 2.837 (3) | 154 (3) |
O15—H151···O2vi | 0.72 (6) | 2.11 (6) | 2.816 (3) | 165 (7) |
O12—H131···O13 | 0.78 (6) | 1.64 (6) | 2.393 (3) | 162 (7) |
O23—H231···O22 | 0.67 (6) | 1.76 (6) | 2.416 (3) | 170 (7) |
O1—H1···O11 | 0.82 (3) | 1.90 (3) | 2.717 (3) | 176 (3) |
O1—H2···O22vii | 0.91 (4) | 1.90 (4) | 2.808 (3) | 174 (3) |
Symmetry codes: (ii) −x+1, y−1/2, −z+3/2; (iii) −x+1, −y, −z+1; (iv) −x+1, −y, −z+2; (v) x−1, −y+1/2, z−1/2; (vi) x−1, y, z; (vii) x, −y+1/2, z−1/2. |
References
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Pyrazine-2,3-dicarboxylate ligand shows a marked tendency to form metal coordination compounds depending on the conditions of chemical preparation. Three ZnII coordination polymers with the title ligand (2,3-PZDC) showing polymeric structures are known: a triclinic complex Zn(2,3-PZDC)(H2O)2.H2O (Richard et al., 1974); a monoclinic complex Zn(2,3-PZDC)(H2O)3. H2O (Ptasiewicz-Bąk & Leciejewicz, 1999), and a monoclinic [(H3O)1+]2 [Zn(2,3-PZDC)2]2- (Gryz, et al., 2005). Two LiI complexes with the title ligand have been recently reported (Tombul et al., 2008; Tombul & Güven, 2009). The asymmetric unit of the title compound contains two symmetry independent LiI ions, two ligand molecules, two coordinated and two crystal water molecules (Fig. 1, Table 1). LiI ions and the ligands form two parallel molecular chains propagating in the b direction. In each, the Li ion shows a distorted trigonal bipyramidal coordination. The Li1 ion is 0.017 (1)Å out of the basal plane composed of carboxylato O11, O14i and aqua O15 atoms; hetero N11 and N12i atoms are at axial positions. The equatorial plane in the case of the Li2 ion consists of carboxylate O21, O24ii and water O25 atoms; hetero N21 and N22ii form the apices. The Li2 ion is 0.012 (1)Å out of the basal plane. The observed Li—O and Li—N bond distances are characteristic for LiI complexes with diazine carboxylate ligands (Table 1). Each ligand uses both its N,O chelating sites to bridge LiI ions. The second carboxylato O atoms do not participate in coordination but remain protonated to maintain the charge balance. In both ligands these protons are active in short intra-molecular hydrogen bonds of 2.393 (3) Å and 2.416 (3) Å (Table 2). The same effect has been also observed in another LiI complex with the title ligand (Tombul et al., 2008), a complex with pyrazine-2,3,5,6-tetracarboxylate ligand (Starosta & Leciejewicz, 2010) and a complex with pyrazine -2,5-dicarboxylate ligand (Starosta & Leciejewicz, 2011). Bond lengths and bond angles within both pyrazine rings do not differ from those reported in the structures of two modifications of the parent acid (Takusagawa & Shimada, 1973; Premkumar, et al., 2004). Pyrazine rings are planar with r.m.s of 0.0040 (2) and 0.0094 (2) Å, for ligand 1 and 2, respectively. The carboxylate groups C17/O11/O12 and C8/O13/O14 make with the pyrazine ring 1 the dihedral angles of 4.8 (1)° and 3.8 (1)°, respectively. Dihedral angles made by the carboxylate groups C27/O21/O22 and C28/O23/O24 with the pyrazine ring 2 are 15.4 (2)° and 4.3 (1)°, respectively. Crystal and coordinated water molecules participate in a network of hydrogen bonds which connect the ribbons (Table 2, Fig. 2). They act as donors, the carboxylato O atoms as acceptors.