organic compounds
5-(4-Chlorobenzyl)-1H-tetrazole
aCollege of Chemistry and Materials Science, Heilongjiang University, Harbin 150080, People's Republic of China
*Correspondence e-mail: hgf1000@163.com
In the title compound, C8H7ClN4, the phenyl and tetrazole rings are inclined at a dihedral angle of 67.52 (6)°. In the crystal, molecules are linked by an N—H⋯N hydrogen bond into a chain structure along [010]. π–π interactions with centroid–centroid distances of 3.526 (1) Å between adjacent tetrazole rings further link the chains, forming a ribbon structure.
Related literature
For background to tetrazole compounds, see: Kitagawa et al. (2004); Zhao et al. (2008); For the synthesis, see: Luo et al. (2006).
Experimental
Crystal data
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Refinement
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811028388/ng5199sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811028388/ng5199Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811028388/ng5199Isup3.cml
The title compound was prepared as follows (Luo et al. 2006):2-(4-chlorophenyl)acetonitrile (6.06 g, 0.04 mol), NaN3 (3.9 g, 0.06 mol) and NH4Cl (3.21 g, 0.06 mol) were dissolved in DMF (120 ml). The mixture was reflux for 20 h under stirring. Then, it was cooled to room temperature and the mixture was filtered. The solvent was evaporated and the residue was poured into cold water (30 ml) to give the title compound (4.32 g, 55.5 %). The crystals suitable for X-ray diffraction were obtained from 10 mL mixed solution of ethanol and water (1:1).
The anormal reflection data (-12 3 3) have been omitted during the refinement.H atoms bound to C atoms were placed in calculated positions and treated as riding on their parent atoms, with C—H = 0.93 Å (aromatic); C—H = 0.97 Å (methylene), and with Uiso(H) = 1.2Ueq(C). N-bounded H atom was found from Fourier map and was refined restrainedly with N—H = 0.90 Å.
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C8H7ClN4 | F(000) = 400 |
Mr = 194.63 | Dx = 1.464 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6142 reflections |
a = 14.654 (3) Å | θ = 3.3–25.1° |
b = 4.9321 (10) Å | µ = 0.39 mm−1 |
c = 12.688 (3) Å | T = 293 K |
β = 105.63 (3)° | Block, colorless |
V = 883.1 (3) Å3 | 0.40 × 0.38 × 0.15 mm |
Z = 4 |
Rigaku R-AXIS RAPID diffractometer | 2015 independent reflections |
Radiation source: fine-focus sealed tube | 1546 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
ω scans | θmax = 27.5°, θmin = 3.3° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −18→19 |
Tmin = 0.860, Tmax = 0.944 | k = −6→6 |
8039 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.094 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0482P)2 + 0.0994P] where P = (Fo2 + 2Fc2)/3 |
2015 reflections | (Δ/σ)max = 0.001 |
122 parameters | Δρmax = 0.18 e Å−3 |
1 restraint | Δρmin = −0.33 e Å−3 |
C8H7ClN4 | V = 883.1 (3) Å3 |
Mr = 194.63 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.654 (3) Å | µ = 0.39 mm−1 |
b = 4.9321 (10) Å | T = 293 K |
c = 12.688 (3) Å | 0.40 × 0.38 × 0.15 mm |
β = 105.63 (3)° |
Rigaku R-AXIS RAPID diffractometer | 2015 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1546 reflections with I > 2σ(I) |
Tmin = 0.860, Tmax = 0.944 | Rint = 0.025 |
8039 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 1 restraint |
wR(F2) = 0.094 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.18 e Å−3 |
2015 reflections | Δρmin = −0.33 e Å−3 |
122 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.37038 (9) | 0.2990 (3) | 1.07319 (14) | 0.0463 (4) | |
C2 | 0.29853 (11) | 0.4022 (3) | 1.11205 (14) | 0.0503 (4) | |
H2 | 0.2911 | 0.3450 | 1.1791 | 0.060* | |
C3 | 0.23731 (10) | 0.5923 (3) | 1.05032 (13) | 0.0465 (4) | |
H3 | 0.1891 | 0.6638 | 1.0768 | 0.056* | |
C4 | 0.24675 (9) | 0.6773 (3) | 0.95005 (12) | 0.0380 (3) | |
C5 | 0.31899 (11) | 0.5667 (3) | 0.91227 (15) | 0.0467 (4) | |
H5 | 0.3259 | 0.6203 | 0.8446 | 0.056* | |
C6 | 0.38090 (11) | 0.3781 (3) | 0.97347 (15) | 0.0518 (4) | |
H6 | 0.4292 | 0.3057 | 0.9473 | 0.062* | |
C7 | 0.18309 (10) | 0.8938 (3) | 0.88444 (14) | 0.0451 (4) | |
H7A | 0.2059 | 1.0694 | 0.9149 | 0.054* | |
H7B | 0.1887 | 0.8888 | 0.8100 | 0.054* | |
C8 | 0.08089 (9) | 0.8704 (2) | 0.88086 (11) | 0.0311 (3) | |
Cl1 | 0.44739 (3) | 0.06175 (9) | 1.15206 (5) | 0.0707 (2) | |
N1 | 0.03034 (8) | 0.6471 (2) | 0.87394 (9) | 0.0347 (3) | |
N2 | −0.06056 (8) | 0.7269 (2) | 0.86416 (10) | 0.0393 (3) | |
N3 | −0.06566 (8) | 0.9885 (2) | 0.86545 (10) | 0.0404 (3) | |
N4 | 0.02296 (8) | 1.0797 (2) | 0.87674 (9) | 0.0346 (3) | |
H1 | 0.0343 (11) | 1.2592 (6) | 0.8810 (12) | 0.048 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0327 (7) | 0.0365 (7) | 0.0624 (10) | 0.0041 (6) | 0.0001 (6) | −0.0060 (7) |
C2 | 0.0506 (9) | 0.0497 (9) | 0.0504 (10) | 0.0101 (7) | 0.0130 (7) | 0.0055 (7) |
C3 | 0.0416 (8) | 0.0477 (9) | 0.0531 (10) | 0.0127 (7) | 0.0176 (7) | 0.0025 (7) |
C4 | 0.0330 (6) | 0.0302 (7) | 0.0494 (9) | −0.0047 (6) | 0.0090 (6) | −0.0018 (6) |
C5 | 0.0424 (8) | 0.0469 (9) | 0.0548 (10) | −0.0032 (7) | 0.0198 (7) | −0.0019 (7) |
C6 | 0.0354 (7) | 0.0486 (9) | 0.0741 (12) | 0.0022 (7) | 0.0194 (8) | −0.0124 (8) |
C7 | 0.0401 (7) | 0.0327 (7) | 0.0615 (10) | −0.0044 (6) | 0.0119 (7) | 0.0091 (7) |
C8 | 0.0390 (6) | 0.0224 (6) | 0.0306 (7) | 0.0005 (5) | 0.0068 (5) | 0.0001 (5) |
Cl1 | 0.0512 (3) | 0.0538 (3) | 0.0907 (4) | 0.0194 (2) | −0.0094 (2) | −0.0025 (2) |
N1 | 0.0390 (6) | 0.0229 (5) | 0.0424 (7) | −0.0012 (5) | 0.0115 (5) | −0.0019 (4) |
N2 | 0.0390 (6) | 0.0329 (6) | 0.0473 (7) | −0.0002 (5) | 0.0140 (5) | −0.0006 (5) |
N3 | 0.0429 (6) | 0.0337 (6) | 0.0465 (7) | 0.0059 (5) | 0.0153 (5) | 0.0025 (5) |
N4 | 0.0461 (6) | 0.0209 (5) | 0.0366 (7) | 0.0024 (5) | 0.0107 (5) | 0.0003 (4) |
C1—C6 | 1.372 (2) | C6—H6 | 0.9300 |
C1—C2 | 1.375 (2) | C7—C8 | 1.4906 (19) |
C1—Cl1 | 1.7423 (16) | C7—H7A | 0.9700 |
C2—C3 | 1.385 (2) | C7—H7B | 0.9700 |
C2—H2 | 0.9300 | C8—N1 | 1.3169 (17) |
C3—C4 | 1.381 (2) | C8—N4 | 1.3284 (17) |
C3—H3 | 0.9300 | N1—N2 | 1.3622 (16) |
C4—C5 | 1.386 (2) | N2—N3 | 1.2927 (17) |
C4—C7 | 1.5117 (19) | N3—N4 | 1.3449 (17) |
C5—C6 | 1.383 (2) | N4—H1 | 0.8998 (11) |
C5—H5 | 0.9300 | ||
C6—C1—C2 | 120.83 (14) | C5—C6—H6 | 120.3 |
C6—C1—Cl1 | 120.30 (12) | C8—C7—C4 | 115.34 (12) |
C2—C1—Cl1 | 118.87 (14) | C8—C7—H7A | 108.4 |
C1—C2—C3 | 119.32 (16) | C4—C7—H7A | 108.4 |
C1—C2—H2 | 120.3 | C8—C7—H7B | 108.4 |
C3—C2—H2 | 120.3 | C4—C7—H7B | 108.4 |
C4—C3—C2 | 121.06 (13) | H7A—C7—H7B | 107.5 |
C4—C3—H3 | 119.5 | N1—C8—N4 | 107.77 (11) |
C2—C3—H3 | 119.5 | N1—C8—C7 | 127.54 (12) |
C3—C4—C5 | 118.32 (14) | N4—C8—C7 | 124.55 (12) |
C3—C4—C7 | 121.43 (13) | C8—N1—N2 | 106.44 (10) |
C5—C4—C7 | 120.20 (14) | N3—N2—N1 | 110.23 (11) |
C6—C5—C4 | 121.15 (16) | N2—N3—N4 | 106.11 (11) |
C6—C5—H5 | 119.4 | C8—N4—N3 | 109.45 (11) |
C4—C5—H5 | 119.4 | C8—N4—H1 | 131.0 (11) |
C1—C6—C5 | 119.31 (14) | N3—N4—H1 | 119.5 (10) |
C1—C6—H6 | 120.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H1···N1i | 0.90 (1) | 1.92 (1) | 2.8013 (15) | 168 (2) |
Symmetry code: (i) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C8H7ClN4 |
Mr | 194.63 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 14.654 (3), 4.9321 (10), 12.688 (3) |
β (°) | 105.63 (3) |
V (Å3) | 883.1 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.39 |
Crystal size (mm) | 0.40 × 0.38 × 0.15 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.860, 0.944 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8039, 2015, 1546 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.094, 1.08 |
No. of reflections | 2015 |
No. of parameters | 122 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.18, −0.33 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H1···N1i | 0.8998 (11) | 1.915 (4) | 2.8013 (15) | 167.8 (15) |
Symmetry code: (i) x, y+1, z. |
Acknowledgements
The authors thank Heilongjiang University for supporting this work.
References
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Kitagawa, S., Kitaura, R. & Noro, S. I. (2004). Angew. Chem. Int. Ed., 43, 2334–2375. Web of Science CrossRef CAS Google Scholar
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The tetrazole has attracted considerable interesting owing to their structural characterization in coordination chemistry and the extensively application in medicinal chemistry and materials science (Zhao et al. 2008; Kitagawa et al. 2004). Here, we report the synthesis and crystal structure of the title compound.
As shown in fig.1, the benzenyl plane and tetrazole rings form a dihedral angle about 67.52 (6) ° (Fig. 1). In the crystal packing, the molecules are linked by N—H···N hydrogen bonds into a chain structure alone [010] (Fig. 2, Table 1). The π—π interactions with distances of 3.526 (1) Å (center to center) between the adjacent tetrazole rings further link them to form ribbon structure (Fig. 3).