organic compounds
1,3-Diallyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one
aLaboratoire de Chimie Organique Appliquée, Université Sidi Mohamed, Ben Abdallah, Faculté des Sciences et Techniques, Route d'Immouzzer, BP 2202 Fès, Morocco, bDepartamento de Quimica Inorganica & Organica, ESTCE, Universitat Jaume I, E-12080 Castellon, Spain, cInstitut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany, and dLaboratoire de Chimie du Solide Appliquée, Faculté des Sciences, Université Mohammed V-Agdal, Avenue Ibn Battouta, BP 1014, Rabat, Morocco
*Correspondence e-mail: s_dahmani12@yahoo.fr
In the molecule of the title compound, C12H12BrN3O, the fused-ring system is essentially planar, the largest deviation from the mean plane being 0.0148 (3) Å. The two allyl groups are nearly perpendicular to the imidazo[4,5-b]pyridine plane [C—C—N—C torsion angles of 81.6 (4) and −77.2 (4)°] and point in the same direction. The planes through the atoms forming each allyl group are nearly perpendicular to the imidazo[4,5-b]pyridin-2-one system, as indicated by the dihedral angles between them of 80.8 (5) and 73.6 (5)°.
Related literature
For background to the biological activity of substituted imidazopyridines and related compounds, see: Barraclough et al. (1990); Bavetsias et al. (2007, 2010); Coates et al. (1993); Liu et al. (2008); Ryabukhin et al. (2006); Schiffmann et al. (2006).
Experimental
Crystal data
|
Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536811026869/om2445sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811026869/om2445Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811026869/om2445Isup3.cml
To a stirred solution of 6-bromo-1,3-dihydro-imidazo[4,5 - b-]pyridin-2- one (0.5 g; 2.33 mmol), K2CO3 (1.29 g; 9.34 mmol), and tetrabutylammonium bromide (0.07 g; 2.37 10 -4 mol) in DMF, allylbromide (0.5 ml; 5.84 mmol) was added dropwise. Stirring was continued at room temperature for 24 h. After completion of reaction (monitored by TLC), the salt was filtered and the solvent was removed under reduced pressure. The resulting residue was purified by
on silica gel using ethylacetate/hexane (1/1) as The crystals of the title compound are obtained by dissolving 80 mg of product in 4 ml of ethanol at about 353 K, followed by a slow evaporation of the solvent.The origin of the non centro symmetric
is fxed by the SHELXL program and the 1495 Friedel opposite refletions are not merged. H atoms were located in a difference map and treated as riding with C—H = 0.93 Å and 0.97 Å for aromatic and methylene respectively. All H atoms with Uiso(H) = 1.2 Ueq (aromatic and methylene).Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. : Plot of the molecule of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small circles. |
C12H12BrN3O | F(000) = 592 |
Mr = 294.16 | Dx = 1.525 Mg m−3 |
Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: p 2c -2n | Cell parameters from 3201 reflections |
a = 5.4110 (3) Å | θ = 1.6–28.5° |
b = 25.4205 (12) Å | µ = 3.20 mm−1 |
c = 9.3170 (4) Å | T = 273 K |
V = 1281.56 (11) Å3 | Block, colourless |
Z = 4 | 0.52 × 0.32 × 0.14 mm |
Bruker CCD three-circle diffractometer | 3201 independent reflections |
Radiation source: sealed tube | 2361 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
phi and ω scans | θmax = 28.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −6→7 |
Tmin = 0.202, Tmax = 0.800 | k = −25→34 |
8789 measured reflections | l = −12→12 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.100 | w = 1/[σ2(Fo2) + (0.0402P)2 + 0.2176P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
3201 reflections | Δρmax = 0.44 e Å−3 |
156 parameters | Δρmin = −0.23 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1494 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.040 (17) |
C12H12BrN3O | V = 1281.56 (11) Å3 |
Mr = 294.16 | Z = 4 |
Orthorhombic, Pna21 | Mo Kα radiation |
a = 5.4110 (3) Å | µ = 3.20 mm−1 |
b = 25.4205 (12) Å | T = 273 K |
c = 9.3170 (4) Å | 0.52 × 0.32 × 0.14 mm |
Bruker CCD three-circle diffractometer | 3201 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 2361 reflections with I > 2σ(I) |
Tmin = 0.202, Tmax = 0.800 | Rint = 0.027 |
8789 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.100 | Δρmax = 0.44 e Å−3 |
S = 1.03 | Δρmin = −0.23 e Å−3 |
3201 reflections | Absolute structure: Flack (1983), 1494 Friedel pairs |
156 parameters | Absolute structure parameter: 0.040 (17) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against all reflections. The weighted Rw factor and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.99838 (6) | 0.148410 (15) | 0.99886 (11) | 0.07396 (14) | |
N1 | 0.5607 (5) | 0.19539 (10) | 0.6617 (3) | 0.0585 (6) | |
N2 | 0.2257 (4) | 0.14754 (9) | 0.5520 (3) | 0.0541 (6) | |
N3 | 0.2480 (5) | 0.07428 (9) | 0.6813 (3) | 0.0552 (6) | |
O1 | −0.0599 (4) | 0.08103 (10) | 0.5080 (4) | 0.0730 (6) | |
C1 | 0.7552 (5) | 0.14820 (11) | 0.8523 (3) | 0.0515 (7) | |
C2 | 0.7283 (6) | 0.19139 (12) | 0.7678 (4) | 0.0592 (8) | |
H2 | 0.8321 | 0.2199 | 0.7842 | 0.071* | |
C3 | 0.6043 (6) | 0.10361 (12) | 0.8374 (3) | 0.0532 (7) | |
H3 | 0.6209 | 0.0739 | 0.8948 | 0.064* | |
C4 | 0.4298 (5) | 0.10753 (12) | 0.7306 (3) | 0.0496 (6) | |
C5 | 0.4169 (6) | 0.15329 (11) | 0.6493 (4) | 0.0489 (6) | |
C6 | 0.1188 (6) | 0.09843 (13) | 0.5717 (4) | 0.0579 (7) | |
C7 | 0.1361 (6) | 0.18683 (13) | 0.4530 (4) | 0.0621 (8) | |
H7A | 0.1349 | 0.2207 | 0.5011 | 0.075* | |
H7B | −0.0331 | 0.1784 | 0.4274 | 0.075* | |
C8 | 0.2846 (7) | 0.19138 (15) | 0.3195 (4) | 0.0706 (9) | |
H8 | 0.2371 | 0.2173 | 0.2548 | 0.090 (12)* | |
C9 | 0.4653 (9) | 0.1641 (3) | 0.2855 (6) | 0.0939 (15) | |
H9A | 0.5201 | 0.1376 | 0.3466 | 0.113* | |
H9B | 0.5461 | 0.1701 | 0.1989 | 0.113* | |
C10 | 0.1712 (7) | 0.02523 (13) | 0.7497 (4) | 0.0694 (9) | |
H10A | 0.0091 | 0.0156 | 0.7137 | 0.083* | |
H10B | 0.1562 | 0.0311 | 0.8522 | 0.083* | |
C11 | 0.3410 (8) | −0.01892 (15) | 0.7256 (5) | 0.0771 (10) | |
H11 | 0.3027 | −0.0503 | 0.7717 | 0.129 (19)* | |
C12 | 0.5362 (7) | −0.01882 (17) | 0.6479 (6) | 0.0832 (12) | |
H12A | 0.5828 | 0.0116 | 0.5995 | 0.100* | |
H12B | 0.6313 | −0.0491 | 0.6400 | 0.100* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.05433 (18) | 0.1026 (3) | 0.0649 (2) | 0.00262 (14) | −0.01189 (13) | −0.0127 (2) |
N1 | 0.0564 (13) | 0.0460 (14) | 0.0731 (17) | −0.0070 (11) | −0.0083 (14) | 0.0032 (13) |
N2 | 0.0478 (13) | 0.0545 (14) | 0.0599 (15) | −0.0015 (10) | −0.0090 (11) | 0.0029 (10) |
N3 | 0.0493 (13) | 0.0476 (13) | 0.0686 (15) | −0.0089 (10) | −0.0042 (12) | 0.0025 (11) |
O1 | 0.0564 (12) | 0.0847 (15) | 0.0781 (16) | −0.0178 (10) | −0.0148 (16) | −0.0040 (16) |
C1 | 0.0412 (14) | 0.0642 (18) | 0.0489 (15) | 0.0007 (13) | −0.0024 (12) | −0.0096 (13) |
C2 | 0.0507 (16) | 0.0556 (17) | 0.071 (2) | −0.0074 (13) | −0.0041 (15) | −0.0080 (15) |
C3 | 0.0489 (15) | 0.0567 (17) | 0.0539 (16) | 0.0026 (13) | 0.0034 (14) | 0.0046 (13) |
C4 | 0.0416 (14) | 0.0549 (17) | 0.0522 (16) | −0.0013 (11) | 0.0038 (12) | −0.0024 (13) |
C5 | 0.0446 (14) | 0.0454 (16) | 0.0566 (17) | 0.0003 (11) | −0.0005 (14) | −0.0055 (13) |
C6 | 0.0531 (17) | 0.0630 (18) | 0.0575 (17) | −0.0051 (14) | −0.0016 (15) | −0.0051 (15) |
C7 | 0.0550 (17) | 0.0651 (19) | 0.0662 (19) | 0.0019 (13) | −0.0108 (15) | 0.0016 (15) |
C8 | 0.077 (2) | 0.083 (2) | 0.0523 (17) | −0.0094 (19) | −0.0090 (18) | 0.0031 (17) |
C9 | 0.092 (4) | 0.119 (4) | 0.071 (3) | 0.003 (2) | 0.017 (2) | −0.005 (3) |
C10 | 0.065 (2) | 0.062 (2) | 0.081 (2) | −0.0164 (15) | 0.0003 (19) | 0.0097 (17) |
C11 | 0.089 (3) | 0.056 (2) | 0.086 (3) | −0.0155 (18) | 0.004 (2) | 0.0058 (18) |
C12 | 0.086 (3) | 0.066 (3) | 0.098 (3) | −0.0118 (17) | 0.008 (2) | −0.014 (2) |
Br1—C1 | 1.896 (3) | C4—C5 | 1.390 (4) |
N1—C5 | 1.328 (4) | C7—C8 | 1.485 (5) |
N1—C2 | 1.345 (4) | C7—H7A | 0.9700 |
N2—C5 | 1.383 (4) | C7—H7B | 0.9700 |
N2—C6 | 1.388 (4) | C8—C9 | 1.240 (6) |
N2—C7 | 1.444 (4) | C8—H8 | 0.9300 |
N3—C4 | 1.376 (4) | C9—H9A | 0.9300 |
N3—C6 | 1.381 (4) | C9—H9B | 0.9300 |
N3—C10 | 1.461 (4) | C10—C11 | 1.467 (6) |
O1—C6 | 1.218 (4) | C10—H10A | 0.9700 |
C1—C2 | 1.359 (4) | C10—H10B | 0.9700 |
C1—C3 | 1.404 (4) | C11—C12 | 1.281 (6) |
C2—H2 | 0.9300 | C11—H11 | 0.9300 |
C3—C4 | 1.375 (5) | C12—H12A | 0.9300 |
C3—H3 | 0.9300 | C12—H12B | 0.9300 |
C5—N1—C2 | 113.5 (3) | N2—C7—C8 | 114.0 (3) |
C5—N2—C6 | 108.7 (2) | N2—C7—H7A | 108.7 |
C5—N2—C7 | 126.6 (2) | C8—C7—H7A | 108.7 |
C6—N2—C7 | 124.5 (3) | N2—C7—H7B | 108.7 |
C4—N3—C6 | 109.6 (3) | C8—C7—H7B | 108.7 |
C4—N3—C10 | 125.6 (3) | H7A—C7—H7B | 107.6 |
C6—N3—C10 | 123.9 (3) | C9—C8—C7 | 126.6 (4) |
C2—C1—C3 | 122.2 (3) | C9—C8—H8 | 116.7 |
C2—C1—Br1 | 119.3 (2) | C7—C8—H8 | 116.7 |
C3—C1—Br1 | 118.5 (2) | C8—C9—H9A | 120.0 |
N1—C2—C1 | 124.0 (3) | C8—C9—H9B | 120.0 |
N1—C2—H2 | 118.0 | H9A—C9—H9B | 120.0 |
C1—C2—H2 | 118.0 | N3—C10—C11 | 114.1 (3) |
C4—C3—C1 | 114.4 (3) | N3—C10—H10A | 108.7 |
C4—C3—H3 | 122.8 | C11—C10—H10A | 108.7 |
C1—C3—H3 | 122.8 | N3—C10—H10B | 108.7 |
C3—C4—N3 | 133.4 (3) | C11—C10—H10B | 108.7 |
C3—C4—C5 | 119.3 (3) | H10A—C10—H10B | 107.6 |
N3—C4—C5 | 107.3 (3) | C12—C11—C10 | 127.0 (4) |
N1—C5—N2 | 125.5 (3) | C12—C11—H11 | 116.5 |
N1—C5—C4 | 126.7 (3) | C10—C11—H11 | 116.5 |
N2—C5—C4 | 107.8 (2) | C11—C12—H12A | 120.0 |
O1—C6—N3 | 126.9 (3) | C11—C12—H12B | 120.0 |
O1—C6—N2 | 126.4 (3) | H12A—C12—H12B | 120.0 |
N3—C6—N2 | 106.6 (3) | ||
C5—N1—C2—C1 | 1.8 (5) | N3—C4—C5—N1 | −179.7 (3) |
C3—C1—C2—N1 | −1.2 (5) | C3—C4—C5—N2 | −179.1 (3) |
Br1—C1—C2—N1 | −179.5 (3) | N3—C4—C5—N2 | 0.5 (3) |
C2—C1—C3—C4 | 0.2 (4) | C4—N3—C6—O1 | −176.8 (4) |
Br1—C1—C3—C4 | 178.6 (2) | C10—N3—C6—O1 | −7.0 (5) |
C1—C3—C4—N3 | −179.4 (3) | C4—N3—C6—N2 | 0.7 (3) |
C1—C3—C4—C5 | 0.0 (4) | C10—N3—C6—N2 | 170.5 (3) |
C6—N3—C4—C3 | 178.7 (3) | C5—N2—C6—O1 | 177.2 (4) |
C10—N3—C4—C3 | 9.2 (6) | C7—N2—C6—O1 | 1.4 (5) |
C6—N3—C4—C5 | −0.7 (3) | C5—N2—C6—N3 | −0.4 (3) |
C10—N3—C4—C5 | −170.3 (3) | C7—N2—C6—N3 | −176.1 (3) |
C2—N1—C5—N2 | 178.2 (3) | C5—N2—C7—C8 | 81.6 (4) |
C2—N1—C5—C4 | −1.6 (5) | C6—N2—C7—C8 | −103.5 (3) |
C6—N2—C5—N1 | −179.9 (3) | N2—C7—C8—C9 | 2.7 (6) |
C7—N2—C5—N1 | −4.3 (5) | C4—N3—C10—C11 | −77.2 (4) |
C6—N2—C5—C4 | −0.1 (3) | C6—N3—C10—C11 | 114.7 (4) |
C7—N2—C5—C4 | 175.5 (3) | N3—C10—C11—C12 | −3.3 (6) |
C3—C4—C5—N1 | 0.8 (5) |
Experimental details
Crystal data | |
Chemical formula | C12H12BrN3O |
Mr | 294.16 |
Crystal system, space group | Orthorhombic, Pna21 |
Temperature (K) | 273 |
a, b, c (Å) | 5.4110 (3), 25.4205 (12), 9.3170 (4) |
V (Å3) | 1281.56 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 3.20 |
Crystal size (mm) | 0.52 × 0.32 × 0.14 |
Data collection | |
Diffractometer | Bruker CCD three-circle diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.202, 0.800 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8789, 3201, 2361 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.670 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.100, 1.03 |
No. of reflections | 3201 |
No. of parameters | 156 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.44, −0.23 |
Absolute structure | Flack (1983), 1494 Friedel pairs |
Absolute structure parameter | 0.040 (17) |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
References
Barraclough, P., Beams, R. M., Black, J. W., Cambridge, D., Collard, D., Damaine, D. A., Firmin, D., Gerskowitch, V. P., Glen, R. C., Giles, H., Hill, A. P., Hull, R. A. D., Iyer, R., King, W. R., Livingstone, D. J., Nobbs, M. S., Randall, P., Shah, G. P., Smith, S., Vine, S. J. & Whiting, M. V. (1990). Eur. J. Med. Chem. 25, 467–477. CrossRef CAS Web of Science Google Scholar
Bavetsias, V., Large, J. M., Sun, C., Bouloc, N., Kosmopoulou, M., Matteucci, M., Wilsher, N. E., Martins, V., Reynisson, J., Atrash, B., Faisal, A., Urban, F., Valenti, M. & Brandon, A. H. (2010). J. Med. Chem. 53, 5213–5228. Web of Science CrossRef CAS PubMed Google Scholar
Bavetsias, V., Sun, C., Bouloc, N., Reynisson, J., Workman, P., Linardopoulos, S. & McDonald, E. (2007). Bioorg. Med. Chem. 17, 6567–6571. Web of Science CrossRef CAS Google Scholar
Bruker (1997). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Coates, W. J., Connolly, B., Dhanak, D., Flynn, S. T. & Worby, A. (1993). J. Med. Chem. 36, 1387–1392. CrossRef CAS PubMed Web of Science Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Liu, L., Xu, P., Zhou, L. & Lei, P. S. (2008). Chin. Chem. Lett. 19, 1–4. Web of Science CrossRef CAS Google Scholar
Ryabukhin, S. V., Plaskon, A. S., Volochnyuk, D. M. & Tolmachev, A. A. (2006). Synthesis, 21, 3715–3726. Google Scholar
Schiffmann, R., Neugebauer, A. & Klein, C. D. (2006). J. Med. Chem. 49, 511–522. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Substituted imidazopyridines and structurally related compounds are of pharmacological and therapeutical interest. They have been tested for their potential as anticancer, inotropic (Barraclough et al., 1990), selective antihistamine (H1) agents and antibacterial activity (Liu et al., 2008). Imidazo[4,5-b]pyridine derivatives were also reported as Aurora kinases (Bavetsias et al., 2007); Bavetsias et al., 2010), and cyclic PDE inhibitors (Coates et al., 1993). The preparation of these compounds is usually straightforward, and a number of synthetic methods are already available (Ryabukhin et al., 2006; Schiffmann et al., 2006).
In this work, we report the synthesis of 1,3-diallyl-6-bromo-1,3-dihydroimidazo [4,5-b]pyridin-2-one via the reaction between 6-bromo-1,3-dihydro-imidazo [4,5 - b-]pyridin-2-one and allylbromide in DMF using K2CO3 as base (scheme1).
The Plot of the title compound molecule is shown in Fig.1. The two fused five and six-membered rings are nearly planar with the maximum deviation of -0.014 (3)Å from N1. The two allyl chains (–C7–C8–C9) and (–C10–C11–C12) are almost perpendicular to the imidazo[4,5-b]pyridine system mean plane as indicated by the following torsion angles C8–C7–N2–C5 and C11–C10–N3–C4 of 81.6 (4)° and -77.2 (4) ° respectively.