organic compounds
N-(2,6-Dichlorophenyl)succinamic acid
aDepartment of Chemistry, Mangalore University, Mangalagangotri 574 199, Mangalore, India, and bInstitute of Materials Science, Darmstadt University of Technology, Petersenstrasse 23, D-64287 Darmstadt, Germany
*Correspondence e-mail: gowdabt@yahoo.com
In the crystal of the title compound, C10H9Cl2NO3, the conformations of the amide O atom and the carbonyl O atom of the acid segment are anti to each other and to the H atoms on the adjacent –CH2 groups. The C=O and O—H bonds of the acid group are syn to one another. In the crystal, molecules are packed into infinite chains through intermolecular O—H⋯O and N—H⋯O hydrogen bonds.
Related literature
For our studies of the effect of substituents on the structures and other aspects of N-(aryl)-amides, see: Bhat & Gowda (2000); Gowda et al. (2000, 2009a,b). For modes of interlinking carboxylic acids by hydrogen bonds, see: Leiserowitz (1976). For packing of molecules involving dimeric hydrogen-bonding associations of each carboxyl group with a centrosymmetrically related neighbor, see: Jagannathan et al. (1994).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811024949/sj5173sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811024949/sj5173Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811024949/sj5173Isup3.cml
A solution of succinic anhydride (0.01 mole) in toluene (25 ml) was treated dropwise with the solution of 2,6-dichloroaniline (0.01 mole) also in toluene (20 ml) with constant stirring. The resulting mixture was stirred for about one hour and set aside for an additional hour at room temperature for completion of the reaction. The mixture was then treated with dilute hydrochloric acid to remove the unreacted 2,6-dichloroaniline. The resultant title compound was filtered under suction and washed thoroughly with water to remove the unreacted succinic anhydride and succinic acid. It was recrystallized to constant melting point from ethanol. The purity of the compound was checked and characterized by its infrared and NMR spectra.
Colorless needle like single crystals used in X-ray diffraction studies were grown in ethanolic solution by slow evaporation at room temperature.
The H atoms were positioned with idealized geometry using a riding model with the aromatic C—H = 0.93 Å, methylene C—H = 0.97 Å, N—H = 0.86 Å and O—H = 0.82 Å, and were refined with isotropic displacement parameters (set to 1.2 times of the Ueq of the parent atom).
The crystals available for X-ray analysis were of rather poor quality and weak scatterers at high theta value with very low intensity, resulting in relatively high R values. The crystal has 37.1% weak reflections.
Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell
CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C10H9Cl2NO3 | F(000) = 536 |
Mr = 262.08 | Dx = 1.497 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 777 reflections |
a = 4.713 (1) Å | θ = 3.0–27.7° |
b = 11.963 (3) Å | µ = 0.55 mm−1 |
c = 20.687 (4) Å | T = 293 K |
β = 94.64 (2)° | Needle, colourless |
V = 1162.5 (4) Å3 | 0.48 × 0.06 × 0.04 mm |
Z = 4 |
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 1965 independent reflections |
Radiation source: fine-focus sealed tube | 1189 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.052 |
Rotation method data acquisition using ω scans | θmax = 25.2°, θmin = 3.4° |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | h = −5→5 |
Tmin = 0.779, Tmax = 0.978 | k = −12→14 |
3912 measured reflections | l = −16→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.119 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.222 | H-atom parameters constrained |
S = 1.34 | w = 1/[σ2(Fo2) + (0.P)2 + 8.7677P] where P = (Fo2 + 2Fc2)/3 |
1965 reflections | (Δ/σ)max < 0.001 |
145 parameters | Δρmax = 0.57 e Å−3 |
18 restraints | Δρmin = −0.55 e Å−3 |
C10H9Cl2NO3 | V = 1162.5 (4) Å3 |
Mr = 262.08 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 4.713 (1) Å | µ = 0.55 mm−1 |
b = 11.963 (3) Å | T = 293 K |
c = 20.687 (4) Å | 0.48 × 0.06 × 0.04 mm |
β = 94.64 (2)° |
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 1965 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | 1189 reflections with I > 2σ(I) |
Tmin = 0.779, Tmax = 0.978 | Rint = 0.052 |
3912 measured reflections |
R[F2 > 2σ(F2)] = 0.119 | 18 restraints |
wR(F2) = 0.222 | H-atom parameters constrained |
S = 1.34 | Δρmax = 0.57 e Å−3 |
1965 reflections | Δρmin = −0.55 e Å−3 |
145 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.5925 (18) | 0.1082 (7) | 0.3449 (4) | 0.028 (2) | |
C2 | 0.4791 (19) | 0.1566 (8) | 0.2870 (5) | 0.039 (2) | |
C3 | 0.554 (2) | 0.2620 (8) | 0.2688 (5) | 0.049 (3) | |
H3 | 0.4712 | 0.2925 | 0.2304 | 0.059* | |
C4 | 0.749 (3) | 0.3227 (9) | 0.3068 (6) | 0.063 (4) | |
H4 | 0.8010 | 0.3938 | 0.2938 | 0.076* | |
C5 | 0.871 (2) | 0.2786 (9) | 0.3643 (6) | 0.058 (3) | |
H5 | 1.0064 | 0.3186 | 0.3899 | 0.069* | |
C6 | 0.785 (2) | 0.1730 (8) | 0.3832 (5) | 0.041 (3) | |
C7 | 0.6868 (18) | −0.0859 (7) | 0.3757 (4) | 0.027 (2) | |
C8 | 0.5518 (18) | −0.1883 (8) | 0.4030 (5) | 0.039 (2) | |
H8A | 0.3759 | −0.2043 | 0.3771 | 0.047* | |
H8B | 0.5035 | −0.1716 | 0.4467 | 0.047* | |
C9 | 0.7363 (19) | −0.2911 (7) | 0.4051 (4) | 0.034 (2) | |
H9A | 0.7487 | −0.3182 | 0.3613 | 0.041* | |
H9B | 0.9269 | −0.2711 | 0.4225 | 0.041* | |
C10 | 0.627 (2) | −0.3827 (8) | 0.4453 (5) | 0.044 (3) | |
N1 | 0.5076 (14) | 0.0022 (6) | 0.3650 (3) | 0.0312 (18) | |
H1N | 0.3308 | −0.0076 | 0.3709 | 0.037* | |
O1 | 0.9365 (12) | −0.0820 (5) | 0.3658 (3) | 0.0348 (16) | |
O2 | 0.738 (2) | −0.4776 (7) | 0.4371 (4) | 0.095 (3) | |
H2O | 0.6475 | −0.5255 | 0.4551 | 0.114* | |
O3 | 0.460 (2) | −0.3676 (7) | 0.4844 (4) | 0.089 (3) | |
Cl1 | 0.2395 (6) | 0.0781 (3) | 0.23715 (14) | 0.0625 (9) | |
Cl2 | 0.9252 (7) | 0.1234 (3) | 0.45814 (13) | 0.0621 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.024 (5) | 0.017 (5) | 0.046 (6) | 0.003 (4) | 0.012 (4) | −0.001 (4) |
C2 | 0.033 (6) | 0.038 (6) | 0.047 (6) | 0.006 (5) | 0.007 (5) | 0.009 (5) |
C3 | 0.061 (7) | 0.032 (6) | 0.059 (7) | 0.012 (6) | 0.026 (6) | 0.020 (6) |
C4 | 0.074 (9) | 0.024 (6) | 0.096 (10) | −0.002 (6) | 0.030 (8) | 0.006 (7) |
C5 | 0.062 (8) | 0.028 (6) | 0.083 (9) | −0.003 (6) | 0.009 (7) | −0.003 (6) |
C6 | 0.045 (6) | 0.029 (6) | 0.051 (7) | 0.012 (5) | 0.017 (5) | 0.002 (5) |
C7 | 0.023 (5) | 0.023 (5) | 0.035 (5) | −0.003 (4) | 0.000 (4) | 0.004 (4) |
C8 | 0.025 (5) | 0.031 (6) | 0.059 (7) | 0.001 (4) | 0.000 (5) | 0.016 (5) |
C9 | 0.032 (5) | 0.030 (5) | 0.042 (6) | −0.003 (4) | 0.013 (4) | 0.002 (4) |
C10 | 0.048 (6) | 0.022 (5) | 0.065 (7) | 0.021 (5) | 0.025 (5) | 0.015 (5) |
N1 | 0.019 (4) | 0.027 (4) | 0.049 (5) | −0.003 (3) | 0.010 (3) | 0.014 (3) |
O1 | 0.018 (3) | 0.028 (4) | 0.059 (4) | −0.001 (3) | 0.011 (3) | 0.005 (3) |
O2 | 0.119 (7) | 0.057 (5) | 0.120 (6) | 0.012 (5) | 0.075 (5) | 0.031 (5) |
O3 | 0.112 (6) | 0.048 (5) | 0.116 (6) | 0.021 (5) | 0.068 (5) | 0.028 (5) |
Cl1 | 0.0596 (18) | 0.063 (2) | 0.0619 (19) | 0.0017 (16) | −0.0145 (14) | 0.0092 (15) |
Cl2 | 0.080 (2) | 0.0543 (18) | 0.0492 (17) | 0.0067 (16) | −0.0129 (15) | −0.0084 (15) |
C1—C6 | 1.392 (13) | C7—N1 | 1.358 (10) |
C1—C2 | 1.396 (12) | C7—C8 | 1.511 (12) |
C1—N1 | 1.402 (10) | C8—C9 | 1.505 (12) |
C2—C3 | 1.370 (13) | C8—H8A | 0.9700 |
C2—Cl1 | 1.741 (10) | C8—H8B | 0.9700 |
C3—C4 | 1.370 (15) | C9—C10 | 1.491 (12) |
C3—H3 | 0.9300 | C9—H9A | 0.9700 |
C4—C5 | 1.382 (15) | C9—H9B | 0.9700 |
C4—H4 | 0.9300 | C10—O3 | 1.190 (11) |
C5—C6 | 1.391 (14) | C10—O2 | 1.266 (11) |
C5—H5 | 0.9300 | N1—H1N | 0.8600 |
C6—Cl2 | 1.739 (10) | O2—H2O | 0.8200 |
C7—O1 | 1.212 (9) | ||
C6—C1—C2 | 116.4 (8) | N1—C7—C8 | 114.5 (7) |
C6—C1—N1 | 121.6 (8) | C7—C8—C9 | 114.4 (7) |
C2—C1—N1 | 122.0 (8) | C7—C8—H8A | 108.7 |
C3—C2—C1 | 121.9 (10) | C9—C8—H8A | 108.7 |
C3—C2—Cl1 | 120.1 (8) | C7—C8—H8B | 108.7 |
C1—C2—Cl1 | 118.0 (7) | C9—C8—H8B | 108.7 |
C2—C3—C4 | 120.4 (11) | H8A—C8—H8B | 107.6 |
C2—C3—H3 | 119.8 | C10—C9—C8 | 113.1 (7) |
C4—C3—H3 | 119.8 | C10—C9—H9A | 109.0 |
C3—C4—C5 | 120.2 (11) | C8—C9—H9A | 109.0 |
C3—C4—H4 | 119.9 | C10—C9—H9B | 109.0 |
C5—C4—H4 | 119.9 | C8—C9—H9B | 109.0 |
C4—C5—C6 | 118.7 (11) | H9A—C9—H9B | 107.8 |
C4—C5—H5 | 120.7 | O3—C10—O2 | 121.9 (9) |
C6—C5—H5 | 120.7 | O3—C10—C9 | 123.1 (9) |
C5—C6—C1 | 122.4 (10) | O2—C10—C9 | 114.9 (8) |
C5—C6—Cl2 | 117.6 (9) | C7—N1—C1 | 124.2 (7) |
C1—C6—Cl2 | 120.0 (7) | C7—N1—H1N | 117.9 |
O1—C7—N1 | 122.9 (8) | C1—N1—H1N | 117.9 |
O1—C7—C8 | 122.6 (8) | C10—O2—H2O | 109.5 |
C6—C1—C2—C3 | 0.2 (13) | C2—C1—C6—Cl2 | 176.8 (7) |
N1—C1—C2—C3 | 177.3 (8) | N1—C1—C6—Cl2 | −0.4 (12) |
C6—C1—C2—Cl1 | 179.4 (7) | O1—C7—C8—C9 | −11.0 (13) |
N1—C1—C2—Cl1 | −3.4 (11) | N1—C7—C8—C9 | 170.9 (8) |
C1—C2—C3—C4 | 1.5 (15) | C7—C8—C9—C10 | 167.1 (9) |
Cl1—C2—C3—C4 | −177.8 (8) | C8—C9—C10—O3 | −18.2 (16) |
C2—C3—C4—C5 | −0.9 (17) | C8—C9—C10—O2 | 165.2 (10) |
C3—C4—C5—C6 | −1.3 (17) | O1—C7—N1—C1 | −3.5 (14) |
C4—C5—C6—C1 | 3.1 (15) | C8—C7—N1—C1 | 174.5 (8) |
C4—C5—C6—Cl2 | −176.2 (8) | C6—C1—N1—C7 | −62.7 (12) |
C2—C1—C6—C5 | −2.5 (13) | C2—C1—N1—C7 | 120.3 (10) |
N1—C1—C6—C5 | −179.6 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.86 | 2.06 | 2.875 (9) | 159 |
O2—H2O···O3ii | 0.82 | 1.89 | 2.678 (11) | 162 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y−1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H9Cl2NO3 |
Mr | 262.08 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 4.713 (1), 11.963 (3), 20.687 (4) |
β (°) | 94.64 (2) |
V (Å3) | 1162.5 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.55 |
Crystal size (mm) | 0.48 × 0.06 × 0.04 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.779, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3912, 1965, 1189 |
Rint | 0.052 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.119, 0.222, 1.34 |
No. of reflections | 1965 |
No. of parameters | 145 |
No. of restraints | 18 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.57, −0.55 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2009), CrysAlis RED (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.86 | 2.06 | 2.875 (9) | 159 |
O2—H2O···O3ii | 0.82 | 1.89 | 2.678 (11) | 162 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y−1, −z+1. |
Acknowledgements
BSS thanks the University Grants Commission, Government of India, New Delhi, for the award of a research fellowship under its faculty improvement program.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The amide moiety is an important constituent of many biologically important compounds. As part of our studies into the substituent effects on the structures and other aspects of this class of compounds (Bhat & Gowda, 2000; Gowda et al., 2000, 2009a,b), in the present work, the crystal structure of N-(2,6-dichlorophenyl)-succinamic acid (I) has been determined (Fig. 1). The conformation of the amide O atom and the carbonyl O atom of the acid segment are anti to each other and are also anti to the H atoms attached to the adjacent C atoms (Fig.1). Further, C=O and O—H bonds of the acid group are syn to each other, similar to that observed in N-(2-chlorophenyl)-succinamic acid (Gowda et al., 2009a) and N-(2,6-dimethylphenyl)-succinamic acid (Gowda et al., 2009b).
In the structure, the intermolecular O—H···O and N—H···O hydrogen bonds pack the molecules into infinite chains (Table 1, Fig.2).
The modes of interlinking carboxylic acids by hydrogen bonds is described elsewhere (Leiserowitz, 1976). The packing of molecules involving dimeric hydrogen bonded association of each carboxyl group with a centrosymmetrically related neighbor has also been observed (Jagannathan et al., 1994).