organic compounds
(E)-Methyl N′-[(1H-indol-3-yl)methylidene]hydrazinecarboxylate 0.25-hydrate
aLinjiang College, Hangzhou Vocational and Technical College, Hangzhou 310018, People's Republic of China, and bResearch Center of Analysis and Measurement, Zhejiang University of Technology, Hangzhou 310014, People's Republic of China
*Correspondence e-mail: zgdhxc@126.com
The 11H11N3O2·0.25H2O, contains two independent organic molecules and a water molecule, which lies on a twofold rotation axis. The side chains of the two molecules have slightly different orientations, the C=N—N—C torsion angle being −163.03 (15)° in one and −177.52 (14)° in the other, with each adopting a trans configuration with respect to the C=N bond. In the crystal, molecules are linked into chains extending along b by N—H⋯O, O—H⋯N and O—H⋯O hydrogen bonds and in addition, four intermolecular C—H⋯π interactions are present.
of the title compound, CRelated literature
For general background to et al. (1997); Offe et al. (1952); Richardson et al. (1988). For related structures, see: Shang et al. (2007); Tamboura et al. (2009).
see: CimermanExperimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811026249/zs2120sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811026249/zs2120Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811026249/zs2120Isup3.cml
1H-Indole-3-carbaldehyde (1.45 g, 0.01 mol) and methyl hydrazinecarboxylate (0.90g, 0.01 mol) were dissolved in stirred methanol (15 ml) and left for 3.5 h at room temperature. The resulting solid was filtered off and recrystallized from ethanol to give the title compound in 93% yield. Single crystals suitable for X-ray analysis were obtained by slow evaporation of an ethanol solution at room temperature (m.p. 465–467 K).
The water H atom was located in a difference Fourier and both positional and isotropic displacement parameters were refined. Other H atoms were positioned geometrically (N—H = 0.86 Å and C—H = 0.93 or 0.96 Å) and refined using a riding model, with Uiso(H) = 1.2Ueq(C,N) and 1.5Ueq(Cmethyl). A rotating group model was used for the methyl H atoms.
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular conformation and atom numbering scheme for the two independent organic molecules and the water molecule of solvation in the asymmetric unit of the title compound. The water molecule lies on a twofold rotation axis and the hydrogen bond is shown as a dashed line. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 2. Part of the crystal packing of the title compound in the unit cell. Hydrogen bonds are shown as dashed lines. |
C11H11N3O2·0.25H2O | F(000) = 1864 |
Mr = 886.93 | Dx = 1.276 Mg m−3 |
Monoclinic, C2/c | Melting point = 465–467 K |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 27.842 (2) Å | Cell parameters from 4052 reflections |
b = 11.7574 (11) Å | θ = 1.9–25.0° |
c = 18.565 (2) Å | µ = 0.09 mm−1 |
β = 130.558 (5)° | T = 223 K |
V = 4617.2 (8) Å3 | Block, colourless |
Z = 16 | 0.21 × 0.17 × 0.15 mm |
Bruker SMART CCD area-detector diffractometer | 4052 independent reflections |
Radiation source: fine-focus sealed tube | 3083 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −33→33 |
Tmin = 0.977, Tmax = 0.989 | k = −13→13 |
21333 measured reflections | l = −22→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.124 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0709P)2 + 0.7592P] where P = (Fo2 + 2Fc2)/3 |
4052 reflections | (Δ/σ)max < 0.001 |
298 parameters | Δρmax = 0.16 e Å−3 |
1 restraint | Δρmin = −0.19 e Å−3 |
C11H11N3O2·0.25H2O | V = 4617.2 (8) Å3 |
Mr = 886.93 | Z = 16 |
Monoclinic, C2/c | Mo Kα radiation |
a = 27.842 (2) Å | µ = 0.09 mm−1 |
b = 11.7574 (11) Å | T = 223 K |
c = 18.565 (2) Å | 0.21 × 0.17 × 0.15 mm |
β = 130.558 (5)° |
Bruker SMART CCD area-detector diffractometer | 4052 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 3083 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.989 | Rint = 0.029 |
21333 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 1 restraint |
wR(F2) = 0.124 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.16 e Å−3 |
4052 reflections | Δρmin = −0.19 e Å−3 |
298 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.37219 (7) | 0.37491 (12) | 0.56024 (11) | 0.0531 (4) | |
H1A | 0.4010 | 0.3162 | 0.5814 | 0.064* | |
C2 | 0.30987 (8) | 0.35174 (15) | 0.51235 (14) | 0.0696 (5) | |
H2 | 0.2965 | 0.2765 | 0.5014 | 0.083* | |
C3 | 0.26622 (9) | 0.43864 (17) | 0.47977 (16) | 0.0820 (6) | |
H3 | 0.2242 | 0.4201 | 0.4476 | 0.098* | |
C4 | 0.28342 (9) | 0.55074 (16) | 0.49370 (16) | 0.0789 (5) | |
H4 | 0.2539 | 0.6085 | 0.4715 | 0.095* | |
C5 | 0.34667 (8) | 0.57480 (12) | 0.54227 (13) | 0.0584 (4) | |
C6 | 0.39200 (7) | 0.48869 (12) | 0.57692 (10) | 0.0475 (3) | |
C7 | 0.43931 (9) | 0.65934 (14) | 0.61492 (13) | 0.0665 (5) | |
H7 | 0.4696 | 0.7161 | 0.6391 | 0.080* | |
C8 | 0.45160 (7) | 0.54508 (13) | 0.62345 (11) | 0.0522 (4) | |
C9 | 0.51368 (7) | 0.50072 (14) | 0.67094 (11) | 0.0552 (4) | |
H9 | 0.5470 | 0.5521 | 0.7009 | 0.066* | |
C10 | 0.60747 (8) | 0.27236 (15) | 0.71437 (11) | 0.0607 (4) | |
C11 | 0.69308 (11) | 0.1737 (2) | 0.7468 (2) | 0.1228 (10) | |
H11A | 0.7380 | 0.1807 | 0.7843 | 0.184* | |
H11B | 0.6730 | 0.1700 | 0.6809 | 0.184* | |
H11C | 0.6839 | 0.1056 | 0.7644 | 0.184* | |
C12 | 0.10157 (13) | 0.8858 (2) | 0.10052 (18) | 0.0940 (8) | |
H12 | 0.0845 | 0.9202 | 0.0432 | 0.113* | |
C13 | 0.15456 (13) | 0.9284 (2) | 0.1845 (2) | 0.0928 (7) | |
H13 | 0.1743 | 0.9920 | 0.1842 | 0.111* | |
C14 | 0.17960 (9) | 0.87807 (16) | 0.27089 (15) | 0.0760 (5) | |
H14 | 0.2158 | 0.9085 | 0.3271 | 0.091* | |
C15 | 0.15154 (7) | 0.78446 (14) | 0.27389 (12) | 0.0591 (4) | |
H15 | 0.1682 | 0.7524 | 0.3318 | 0.071* | |
C16 | 0.09771 (8) | 0.73753 (14) | 0.18920 (11) | 0.0575 (4) | |
C17 | 0.07411 (10) | 0.78978 (18) | 0.10343 (13) | 0.0741 (5) | |
C18 | 0.01498 (10) | 0.6371 (2) | 0.06843 (15) | 0.0889 (7) | |
H18 | −0.0161 | 0.5817 | 0.0330 | 0.107* | |
C19 | 0.05859 (8) | 0.63973 (15) | 0.16554 (12) | 0.0629 (4) | |
C20 | 0.06170 (8) | 0.56012 (14) | 0.22699 (14) | 0.0649 (5) | |
H20 | 0.0370 | 0.4947 | 0.2013 | 0.078* | |
C21 | 0.13167 (8) | 0.50520 (12) | 0.46021 (14) | 0.0601 (4) | |
C22 | 0.16560 (12) | 0.40801 (19) | 0.59737 (16) | 0.0963 (7) | |
H22A | 0.1588 | 0.3377 | 0.6159 | 0.144* | |
H22B | 0.1545 | 0.4705 | 0.6174 | 0.144* | |
H22C | 0.2093 | 0.4140 | 0.6265 | 0.144* | |
N1 | 0.37741 (8) | 0.67819 (11) | 0.56674 (12) | 0.0742 (4) | |
H1 | 0.3599 | 0.7439 | 0.5534 | 0.089* | |
N2 | 0.52637 (6) | 0.39465 (11) | 0.67489 (9) | 0.0563 (3) | |
N3 | 0.58987 (6) | 0.37255 (13) | 0.72462 (10) | 0.0686 (4) | |
H3N | 0.6178 | 0.4232 | 0.7620 | 0.082* | |
N4 | 0.02321 (9) | 0.7252 (2) | 0.03134 (11) | 0.0964 (6) | |
H4A | 0.0003 | 0.7393 | −0.0282 | 0.116* | |
N5 | 0.09752 (6) | 0.57712 (10) | 0.31589 (11) | 0.0603 (4) | |
N6 | 0.09703 (7) | 0.49139 (11) | 0.36687 (11) | 0.0670 (4) | |
H6 | 0.0749 | 0.4308 | 0.3390 | 0.080* | |
O1 | 0.57234 (6) | 0.19418 (10) | 0.66782 (9) | 0.0769 (4) | |
O2 | 0.66952 (6) | 0.27132 (13) | 0.76297 (11) | 0.0956 (5) | |
O1W | 0.0000 | 0.30761 (12) | 0.2500 | 0.0550 (4) | |
O3 | 0.16253 (6) | 0.58794 (9) | 0.50562 (9) | 0.0702 (3) | |
O4 | 0.12715 (6) | 0.41067 (10) | 0.49677 (10) | 0.0790 (4) | |
H1WA | −0.0053 (11) | 0.2590 (17) | 0.2837 (14) | 0.110 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0528 (9) | 0.0430 (8) | 0.0676 (10) | 0.0006 (6) | 0.0410 (8) | 0.0033 (7) |
C2 | 0.0606 (11) | 0.0536 (10) | 0.0968 (13) | −0.0079 (8) | 0.0522 (11) | −0.0047 (9) |
C3 | 0.0542 (11) | 0.0768 (13) | 0.1139 (16) | −0.0024 (9) | 0.0541 (12) | −0.0064 (11) |
C4 | 0.0640 (12) | 0.0660 (11) | 0.1093 (15) | 0.0177 (9) | 0.0574 (12) | 0.0080 (10) |
C5 | 0.0641 (11) | 0.0464 (8) | 0.0772 (11) | 0.0035 (7) | 0.0515 (10) | 0.0014 (7) |
C6 | 0.0533 (9) | 0.0443 (8) | 0.0554 (9) | 0.0002 (6) | 0.0401 (8) | 0.0017 (6) |
C7 | 0.0784 (12) | 0.0476 (9) | 0.0950 (13) | −0.0127 (8) | 0.0659 (11) | −0.0078 (8) |
C8 | 0.0590 (10) | 0.0474 (8) | 0.0620 (10) | −0.0076 (7) | 0.0446 (9) | −0.0042 (7) |
C9 | 0.0545 (10) | 0.0576 (10) | 0.0632 (10) | −0.0147 (7) | 0.0425 (9) | −0.0093 (7) |
C10 | 0.0535 (10) | 0.0675 (11) | 0.0551 (9) | 0.0027 (8) | 0.0327 (8) | 0.0019 (8) |
C11 | 0.0888 (17) | 0.129 (2) | 0.133 (2) | 0.0305 (15) | 0.0641 (16) | −0.0249 (17) |
C12 | 0.123 (2) | 0.1079 (18) | 0.0932 (16) | 0.0552 (16) | 0.0886 (17) | 0.0451 (14) |
C13 | 0.1119 (19) | 0.0849 (15) | 0.130 (2) | 0.0228 (13) | 0.1002 (19) | 0.0324 (14) |
C14 | 0.0701 (12) | 0.0744 (12) | 0.0918 (14) | 0.0033 (9) | 0.0564 (11) | 0.0109 (10) |
C15 | 0.0549 (10) | 0.0629 (10) | 0.0582 (9) | 0.0075 (7) | 0.0362 (8) | 0.0080 (8) |
C16 | 0.0570 (10) | 0.0627 (10) | 0.0539 (9) | 0.0217 (8) | 0.0365 (8) | 0.0073 (7) |
C17 | 0.0815 (13) | 0.0883 (14) | 0.0601 (11) | 0.0357 (11) | 0.0494 (11) | 0.0148 (10) |
C18 | 0.0670 (13) | 0.1005 (17) | 0.0687 (13) | 0.0171 (11) | 0.0306 (11) | −0.0243 (12) |
C19 | 0.0501 (9) | 0.0642 (11) | 0.0613 (10) | 0.0093 (8) | 0.0304 (9) | −0.0114 (8) |
C20 | 0.0497 (10) | 0.0529 (9) | 0.0816 (13) | −0.0011 (7) | 0.0380 (10) | −0.0145 (9) |
C21 | 0.0554 (10) | 0.0384 (8) | 0.0911 (13) | −0.0019 (7) | 0.0497 (10) | −0.0021 (8) |
C22 | 0.1127 (18) | 0.0771 (14) | 0.0996 (17) | −0.0153 (12) | 0.0692 (16) | 0.0080 (11) |
N1 | 0.0903 (11) | 0.0386 (7) | 0.1144 (12) | 0.0056 (7) | 0.0758 (11) | 0.0035 (7) |
N2 | 0.0464 (8) | 0.0592 (8) | 0.0643 (8) | −0.0069 (6) | 0.0364 (7) | −0.0063 (6) |
N3 | 0.0460 (8) | 0.0722 (9) | 0.0825 (10) | −0.0108 (7) | 0.0394 (8) | −0.0202 (8) |
N4 | 0.0883 (13) | 0.1306 (17) | 0.0476 (9) | 0.0431 (12) | 0.0341 (10) | 0.0016 (10) |
N5 | 0.0542 (8) | 0.0436 (7) | 0.0782 (10) | −0.0021 (6) | 0.0410 (8) | −0.0039 (6) |
N6 | 0.0647 (9) | 0.0428 (7) | 0.0899 (11) | −0.0131 (6) | 0.0486 (9) | −0.0071 (7) |
O1 | 0.0685 (8) | 0.0574 (7) | 0.0732 (8) | 0.0012 (6) | 0.0321 (7) | 0.0016 (6) |
O2 | 0.0550 (8) | 0.1026 (11) | 0.1118 (11) | 0.0021 (7) | 0.0465 (8) | −0.0286 (9) |
O1W | 0.0567 (9) | 0.0410 (8) | 0.0685 (10) | 0.000 | 0.0412 (8) | 0.000 |
O3 | 0.0713 (8) | 0.0426 (6) | 0.0865 (9) | −0.0090 (5) | 0.0468 (7) | −0.0039 (6) |
O4 | 0.0910 (10) | 0.0490 (7) | 0.1064 (11) | −0.0161 (6) | 0.0684 (9) | −0.0004 (6) |
C1—C2 | 1.367 (2) | C13—H13 | 0.9300 |
C1—C6 | 1.403 (2) | C14—C15 | 1.372 (2) |
C1—H1A | 0.9300 | C14—H14 | 0.9300 |
C2—C3 | 1.390 (3) | C15—C16 | 1.399 (2) |
C2—H2 | 0.9300 | C15—H15 | 0.9300 |
C3—C4 | 1.368 (3) | C16—C17 | 1.409 (2) |
C3—H3 | 0.9300 | C16—C19 | 1.442 (2) |
C4—C5 | 1.389 (2) | C17—N4 | 1.382 (3) |
C4—H4 | 0.9300 | C18—N4 | 1.344 (3) |
C5—N1 | 1.382 (2) | C18—C19 | 1.371 (3) |
C5—C6 | 1.406 (2) | C18—H18 | 0.9300 |
C6—C8 | 1.441 (2) | C19—C20 | 1.434 (3) |
C7—N1 | 1.347 (2) | C20—N5 | 1.272 (2) |
C7—C8 | 1.370 (2) | C20—H20 | 0.9300 |
C7—H7 | 0.9300 | C21—O3 | 1.2055 (18) |
C8—C9 | 1.434 (2) | C21—N6 | 1.336 (2) |
C9—N2 | 1.285 (2) | C21—O4 | 1.3502 (19) |
C9—H9 | 0.9300 | C22—O4 | 1.427 (2) |
C10—O1 | 1.2038 (19) | C22—H22A | 0.9600 |
C10—O2 | 1.331 (2) | C22—H22B | 0.9600 |
C10—N3 | 1.336 (2) | C22—H22C | 0.9600 |
C11—O2 | 1.447 (3) | N1—H1 | 0.8600 |
C11—H11A | 0.9600 | N2—N3 | 1.3868 (18) |
C11—H11B | 0.9600 | N3—H3N | 0.8600 |
C11—H11C | 0.9600 | N4—H4A | 0.8600 |
C12—C13 | 1.367 (3) | N5—N6 | 1.3887 (19) |
C12—C17 | 1.384 (3) | N6—H6 | 0.8600 |
C12—H12 | 0.9300 | O1W—H1WA | 0.928 (15) |
C13—C14 | 1.398 (3) | ||
C2—C1—C6 | 118.95 (14) | C13—C14—H14 | 119.5 |
C2—C1—H1A | 120.5 | C14—C15—C16 | 119.54 (16) |
C6—C1—H1A | 120.5 | C14—C15—H15 | 120.2 |
C1—C2—C3 | 121.17 (16) | C16—C15—H15 | 120.2 |
C1—C2—H2 | 119.4 | C15—C16—C17 | 118.01 (18) |
C3—C2—H2 | 119.4 | C15—C16—C19 | 134.57 (15) |
C4—C3—C2 | 121.77 (17) | C17—C16—C19 | 107.38 (17) |
C4—C3—H3 | 119.1 | N4—C17—C12 | 130.9 (2) |
C2—C3—H3 | 119.1 | N4—C17—C16 | 106.6 (2) |
C3—C4—C5 | 117.33 (16) | C12—C17—C16 | 122.4 (2) |
C3—C4—H4 | 121.3 | N4—C18—C19 | 110.9 (2) |
C5—C4—H4 | 121.3 | N4—C18—H18 | 124.6 |
N1—C5—C4 | 130.18 (15) | C19—C18—H18 | 124.6 |
N1—C5—C6 | 107.65 (14) | C18—C19—C20 | 125.10 (19) |
C4—C5—C6 | 122.17 (15) | C18—C19—C16 | 105.46 (19) |
C1—C6—C5 | 118.61 (14) | C20—C19—C16 | 129.43 (15) |
C1—C6—C8 | 134.87 (14) | N5—C20—C19 | 121.37 (15) |
C5—C6—C8 | 106.51 (13) | N5—C20—H20 | 119.3 |
N1—C7—C8 | 110.71 (14) | C19—C20—H20 | 119.3 |
N1—C7—H7 | 124.6 | O3—C21—N6 | 126.17 (16) |
C8—C7—H7 | 124.6 | O3—C21—O4 | 124.73 (18) |
C7—C8—C9 | 122.58 (14) | N6—C21—O4 | 109.10 (14) |
C7—C8—C6 | 106.16 (14) | O4—C22—H22A | 109.5 |
C9—C8—C6 | 131.26 (14) | O4—C22—H22B | 109.5 |
N2—C9—C8 | 124.40 (14) | H22A—C22—H22B | 109.5 |
N2—C9—H9 | 117.8 | O4—C22—H22C | 109.5 |
C8—C9—H9 | 117.8 | H22A—C22—H22C | 109.5 |
O1—C10—O2 | 124.77 (17) | H22B—C22—H22C | 109.5 |
O1—C10—N3 | 124.98 (16) | C7—N1—C5 | 108.96 (13) |
O2—C10—N3 | 110.25 (15) | C7—N1—H1 | 125.5 |
O2—C11—H11A | 109.5 | C5—N1—H1 | 125.5 |
O2—C11—H11B | 109.5 | C9—N2—N3 | 113.83 (13) |
H11A—C11—H11B | 109.5 | C10—N3—N2 | 119.82 (14) |
O2—C11—H11C | 109.5 | C10—N3—H3N | 120.1 |
H11A—C11—H11C | 109.5 | N2—N3—H3N | 120.1 |
H11B—C11—H11C | 109.5 | C18—N4—C17 | 109.66 (16) |
C13—C12—C17 | 117.93 (19) | C18—N4—H4A | 125.2 |
C13—C12—H12 | 121.0 | C17—N4—H4A | 125.2 |
C17—C12—H12 | 121.0 | C20—N5—N6 | 115.05 (14) |
C12—C13—C14 | 121.1 (2) | C21—N6—N5 | 118.48 (13) |
C12—C13—H13 | 119.4 | C21—N6—H6 | 120.8 |
C14—C13—H13 | 119.4 | N5—N6—H6 | 120.8 |
C15—C14—C13 | 120.9 (2) | C10—O2—C11 | 115.48 (17) |
C15—C14—H14 | 119.5 | C21—O4—C22 | 116.13 (15) |
C6—C1—C2—C3 | 0.4 (3) | C15—C16—C17—C12 | −1.0 (2) |
C1—C2—C3—C4 | 0.2 (3) | C19—C16—C17—C12 | −179.00 (16) |
C2—C3—C4—C5 | −0.2 (3) | N4—C18—C19—C20 | 177.95 (16) |
C3—C4—C5—N1 | −179.76 (19) | N4—C18—C19—C16 | −1.3 (2) |
C3—C4—C5—C6 | −0.5 (3) | C15—C16—C19—C18 | −176.42 (17) |
C2—C1—C6—C5 | −1.0 (2) | C17—C16—C19—C18 | 1.06 (17) |
C2—C1—C6—C8 | 179.73 (16) | C15—C16—C19—C20 | 4.4 (3) |
N1—C5—C6—C1 | −179.47 (14) | C17—C16—C19—C20 | −178.17 (15) |
C4—C5—C6—C1 | 1.1 (2) | C18—C19—C20—N5 | −169.80 (16) |
N1—C5—C6—C8 | −0.04 (17) | C16—C19—C20—N5 | 9.3 (3) |
C4—C5—C6—C8 | −179.45 (17) | C8—C7—N1—C5 | 0.4 (2) |
N1—C7—C8—C9 | 179.48 (14) | C4—C5—N1—C7 | 179.13 (19) |
N1—C7—C8—C6 | −0.42 (19) | C6—C5—N1—C7 | −0.2 (2) |
C1—C6—C8—C7 | 179.56 (17) | C8—C9—N2—N3 | 179.82 (14) |
C5—C6—C8—C7 | 0.28 (17) | O1—C10—N3—N2 | −4.1 (3) |
C1—C6—C8—C9 | −0.3 (3) | O2—C10—N3—N2 | 175.87 (15) |
C5—C6—C8—C9 | −179.62 (16) | C9—N2—N3—C10 | −163.03 (15) |
C7—C8—C9—N2 | −175.11 (16) | C19—C18—N4—C17 | 1.1 (2) |
C6—C8—C9—N2 | 4.8 (3) | C12—C17—N4—C18 | 178.02 (19) |
C17—C12—C13—C14 | −1.2 (3) | C16—C17—N4—C18 | −0.4 (2) |
C12—C13—C14—C15 | −0.3 (3) | C19—C20—N5—N6 | −178.25 (13) |
C13—C14—C15—C16 | 1.1 (3) | O3—C21—N6—N5 | 2.6 (2) |
C14—C15—C16—C17 | −0.5 (2) | O4—C21—N6—N5 | −177.00 (13) |
C14—C15—C16—C19 | 176.80 (17) | C20—N5—N6—C21 | −177.52 (14) |
C13—C12—C17—N4 | −176.32 (18) | O1—C10—O2—C11 | 8.4 (3) |
C13—C12—C17—C16 | 1.8 (3) | N3—C10—O2—C11 | −171.5 (2) |
C15—C16—C17—N4 | 177.52 (13) | O3—C21—O4—C22 | −4.5 (2) |
C19—C16—C17—N4 | −0.45 (17) | N6—C21—O4—C22 | 175.15 (16) |
Cg4 and Cg5 are the centroids of the C16–C19/N4 and C12–C17 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 2.15 | 2.9426 (18) | 154 |
O1W—H1WA···N2ii | 0.93 (2) | 2.19 (2) | 3.0773 (17) | 161 (2) |
O1W—H1WA···O1ii | 0.93 (2) | 2.60 (2) | 3.2217 (14) | 125 (2) |
N6—H6···O1W | 0.86 | 2.17 | 3.0087 (17) | 166 |
C7—H7···Cg4iii | 0.93 | 2.85 | 3.594 (3) | 137 |
C9—H9···Cg5iii | 0.93 | 2.74 | 3.537 (3) | 145 |
C22—H22A···Cg4iv | 0.96 | 2.92 | 3.555 (4) | 125 |
C22—H22A···Cg5iv | 0.96 | 2.86 | 3.796 (3) | 125 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z+1; (ii) −x+1/2, −y+1/2, −z+1; (iii) −x, y−1, −z+1/2; (iv) −x+1/2, y+3/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C11H11N3O2·0.25H2O |
Mr | 886.93 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 223 |
a, b, c (Å) | 27.842 (2), 11.7574 (11), 18.565 (2) |
β (°) | 130.558 (5) |
V (Å3) | 4617.2 (8) |
Z | 16 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.21 × 0.17 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2002) |
Tmin, Tmax | 0.977, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21333, 4052, 3083 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.124, 1.05 |
No. of reflections | 4052 |
No. of parameters | 298 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.16, −0.19 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Cg4 and Cg5 are the centroids of the C16–C19/N4 and C12–C17 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 2.15 | 2.9426 (18) | 153.7 |
O1W—H1WA···N2ii | 0.928 (15) | 2.187 (16) | 3.0773 (17) | 160.5 (19) |
O1W—H1WA···O1ii | 0.928 (15) | 2.60 (2) | 3.2217 (14) | 124.5 (17) |
N6—H6···O1W | 0.86 | 2.17 | 3.0087 (17) | 165.8 |
C7—H7···Cg4iii | 0.93 | 2.85 | 3.594 (3) | 137 |
C9—H9···Cg5iii | 0.93 | 2.74 | 3.537 (3) | 145 |
C22—H22A···Cg4iv | 0.96 | 2.92 | 3.555 (4) | 125 |
C22—H22A···Cg5iv | 0.96 | 2.86 | 3.796 (3) | 125 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z+1; (ii) −x+1/2, −y+1/2, −z+1; (iii) −x, y−1, −z+1/2; (iv) −x+1/2, y+3/2, −z+1/2. |
Acknowledgements
The authors thank the Science and Technology Project of Zhejiang Province (grant No. 2007 F70077) and Hangzhou Vocational and Technical College for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Schiff bases have attracted much attention due to their potential analytical applications (Cimerman et al., 1997). They are also important ligands, which have been reported to have mild bacteriostatic activity and are used as potential oral iron-chelating drugs for genetic disorders such as thalassemia (Offe et al., 1952; Richardson et al., 1988). Metal complexes based on Schiff bases have received considerable attention because they can be utilized as model compounds of active centres in various complexes (Tamboura et al., 2009). We report here the crystal structure of the title compound C11H11N3O2 . 0.25H2O.
The title compound (Fig. 1) has two independent, but almost conformationally identical molecules in the asymmetric unit, together with a water molecule of solvation which lies on a twofold rotation axis. Each molecule adopts a trans configuration with respect to the C═ N bond. The N2/N3/O1/O2/C10/C11 and N5/N6/O3/O4/C21/C22 planes form dihedral angles of 20.39 (6)° and 16.57 (6)°, respectively, with the C1—C8/N1 and C12—C19/N4 planes. The dihedral angle between the two independent benzene rings is 64.06 (4)°. The bond lengths and angles are comparable to those observed for methyl N'-[(E)-4-methoxybenzylidene]hydrazinecarboxylate (Shang et al., 2007).
The molecules are linked into chains extending along the b axis by N—H···O, O—H···N and O—H···O hydrogen bonds (Table 1 and Fig. 2). In addition, four intermolecular C—H···π interactions are present.