metal-organic compounds
Tris(1,10-phenanthroline-5,6-dione-κ2N,N′)zinc bis(perchlorate) acetonitrile monosolvate
aChangchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, People's Republic of China, bInstrumental Analysis Center, Hebei Normal University, Shijiazhuang 050016, People's Republic of China, cDepartment of Applied Chemistry, Hengshui University, Hengshui 053000, People's Republic of China, and dCollege of Science, Hebei University of Science and Technology, Shijiazhuang 050018, People's Republic of China
*Correspondence e-mail: zhuguoyi@ciac.jl.cn
In the title compound, [Zn(C12H6N2O2)3](ClO4)2·CH3CN, the ZnII atom is coordinated by six N atoms from three chelating 1,10-phenanthroline-5,6-dione ligands in a distorted octahedral environment. In the crystal, intermolecular C—H⋯O hydrogen bonds and O⋯π and N⋯π interactions [O⋯centroid distances = 2.907 (5) and 2.843 (7) Å; N⋯centroid distance = 2.861 (10) Å] link the complex cations, perchlorate anions and acetonitrile solvent molecules into a three-dimensional network.
Related literature
For the coordination chemistry of 1,10-phenanthroline-5,6-dione, see: Brechin et al. (2008); Khalaji et al. (2007); Ma et al. (2010); Rezvani et al. (2010). For the biological and electrochemical properties of transition metal complexes with 1,10-phenanthroline-5,6-dione, see: Boghaei & Asl (2007); Goss & Abruna (1985); Kou et al. (2009).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536811037081/hy2471sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811037081/hy2471Isup2.hkl
The title compound was prepared by adding a solution of Zn(ClO4)2.2H2O (28.2 mg, 0.1 mmol) in 3 ml acetonitrile to a solution containing 1,10-phenanthroline-5,6-dione (63.1 mg, 0.3 mmol) in 12 ml acetonitrile. The mixture was stirred at room temperature for 5 h and then filtered. Yellow crystals suitable for X-ray diffraction were obtained by slow evaporation of the solvent after two days. They were collected by filtration, washed with diethyl ether and dried in air.
H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 (aromatic) and 0.96 (methyl) Å and with Uiso(H) = 1.2(1.5 for methyl)Ueq(C). The highest residual electron density was found at 2.62 Å from H32 atom and the deepest hole at 0.36 Å from Cl1 atom.
The coordination chemistry of the chelating ligand 1,10-phenanthroline-5,6-dione has been examined in several studies (Khalaji et al., 2007; Ma et al., 2010; Rezvani et al., 2010). Carrying an O-quinone and N-pyridine moiety to form stable complexes with a wide variety of metal ions, this ligand is considered to have many interesting biological and electrochemical properties (Boghaei & Asl, 2007; Goss & Abruna, 1985; Kou et al., 2009). As far as we know, 1,10-phenanthroline-5,6-dione usually binds to metals through its imine N atoms, in some cases both the N and O donors are used simultaneously (Brechin et al., 2008). In this paper, we report the
of the title compound in the hope of exploring some spectroscopic properties of d10 metal complexes.The title compound consists of a [Zn(C12H6N2O2)3]2+ complex cations, two perchlorate anions and an acetonitrile solvent molecule. As shown in Fig. 1, three bidentate 1,10-phenanthroline-5,6-dione ligands are coordinated to the ZnII atom solely via two N atoms. The coordination geometry around the ZnII atom is distorted octahedral, with bite angles of 76.88 (18)–77.9 (2)° for the three bidentate ligands. The cis bond angles at the ZnII atom fall in the range of 76.85 (18)–100.0 (2)° and the trans bond angles are 164.96 (17), 170.57 (18) and 173.9 (2)°, suggesting a significant deviation from a perfect octahedral coordination. The Zn—N bond lengths range from 2.117 (5) to 2.202 (5) Å, with an average of 2.158 (5) Å. There is no strong hydrogen bond in the crystal, as shown in Fig. 2. Weak intermolecular C—H···O hydrogen bonds (Table 1) and O···π and N···π interactions [O···centroid distances = 2.907 (5) and 2.843 (7) Å, N···centroid distance = 2.861 (10) Å] link the complex molecules, perchlorate anions and acetonitrile solvent molecules into a three-dimensional network.
For the coordination chemistry of 1,10-phenanthroline-5,6-dione, see: Brechin et al. (2008); Khalaji et al. (2007); Ma et al. (2010); Rezvani et al. (2010). For the biological and electrochemical properties of transition metal complexes with 1,10-phenanthroline-5,6-dione, see: Boghaei & Asl (2007); Goss & Abruna (1985); Kou et al. (2009).
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 2. The packing diagram viewed along the a axis. |
[Zn(C12H6N2O2)3](ClO4)2·C2H3N | F(000) = 1896 |
Mr = 935.91 | Dx = 1.598 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 5261 reflections |
a = 13.446 (6) Å | θ = 2.3–22.5° |
b = 14.125 (6) Å | µ = 0.85 mm−1 |
c = 20.483 (8) Å | T = 296 K |
V = 3890 (3) Å3 | Prism, yellow |
Z = 4 | 0.30 × 0.12 × 0.12 mm |
Bruker APEXII CCD diffractometer | 9569 independent reflections |
Radiation source: fine-focus sealed tube | 5533 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.079 |
φ and ω scans | θmax = 28.6°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→17 |
Tmin = 0.785, Tmax = 0.905 | k = −18→18 |
23200 measured reflections | l = −27→24 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.075 | w = 1/[σ2(Fo2) + (0.1231P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.220 | (Δ/σ)max = 0.001 |
S = 0.97 | Δρmax = 1.16 e Å−3 |
9569 reflections | Δρmin = −0.39 e Å−3 |
562 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0031 (7) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 4095 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.12 (2) |
[Zn(C12H6N2O2)3](ClO4)2·C2H3N | V = 3890 (3) Å3 |
Mr = 935.91 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 13.446 (6) Å | µ = 0.85 mm−1 |
b = 14.125 (6) Å | T = 296 K |
c = 20.483 (8) Å | 0.30 × 0.12 × 0.12 mm |
Bruker APEXII CCD diffractometer | 9569 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5533 reflections with I > 2σ(I) |
Tmin = 0.785, Tmax = 0.905 | Rint = 0.079 |
23200 measured reflections |
R[F2 > 2σ(F2)] = 0.075 | H-atom parameters constrained |
wR(F2) = 0.220 | Δρmax = 1.16 e Å−3 |
S = 0.97 | Δρmin = −0.39 e Å−3 |
9569 reflections | Absolute structure: Flack (1983), 4095 Friedel pairs |
562 parameters | Absolute structure parameter: 0.12 (2) |
1 restraint |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.30685 (6) | 0.98904 (5) | 0.06979 (3) | 0.0455 (2) | |
Cl1 | 0.67594 (16) | 0.99782 (14) | 0.20658 (10) | 0.0753 (6) | |
Cl2 | 0.34979 (14) | 0.98420 (14) | 0.80652 (8) | 0.0625 (5) | |
C1 | 0.0895 (6) | 0.9679 (5) | 0.1240 (3) | 0.064 (2) | |
H14 | 0.1171 | 0.9259 | 0.1540 | 0.077* | |
C2 | −0.0107 (6) | 0.9882 (7) | 0.1292 (4) | 0.072 (2) | |
H15 | −0.0495 | 0.9619 | 0.1621 | 0.086* | |
C3 | −0.0496 (7) | 1.0470 (6) | 0.0851 (3) | 0.068 (2) | |
H34 | −0.1173 | 1.0604 | 0.0864 | 0.082* | |
C4 | 0.0077 (6) | 1.0874 (5) | 0.0385 (3) | 0.0545 (16) | |
C5 | 0.1094 (5) | 1.0680 (4) | 0.0373 (3) | 0.0454 (15) | |
C6 | −0.0314 (6) | 1.1548 (6) | −0.0103 (3) | 0.0589 (18) | |
C7 | 0.0375 (6) | 1.2115 (5) | −0.0490 (4) | 0.0607 (19) | |
C8 | 0.1777 (5) | 1.1146 (4) | −0.0073 (3) | 0.0434 (14) | |
C9 | 0.1438 (6) | 1.1861 (4) | −0.0494 (3) | 0.0500 (16) | |
C10 | 0.2105 (7) | 1.2283 (5) | −0.0905 (3) | 0.061 (2) | |
H12 | 0.1899 | 1.2756 | −0.1191 | 0.073* | |
C11 | 0.3100 (7) | 1.1998 (5) | −0.0890 (3) | 0.0560 (16) | |
H9 | 0.3567 | 1.2267 | −0.1169 | 0.067* | |
C12 | 0.3362 (6) | 1.1323 (5) | −0.0463 (3) | 0.0537 (17) | |
H23 | 0.4026 | 1.1138 | −0.0453 | 0.064* | |
C13 | 0.2120 (8) | 0.8282 (5) | −0.0163 (3) | 0.073 (3) | |
H32 | 0.1532 | 0.8421 | 0.0056 | 0.088* | |
C14 | 0.2102 (9) | 0.7601 (5) | −0.0669 (4) | 0.082 (3) | |
H21 | 0.1518 | 0.7281 | −0.0773 | 0.098* | |
C15 | 0.2969 (11) | 0.7423 (5) | −0.1005 (4) | 0.092 (4) | |
H25 | 0.2984 | 0.6983 | −0.1343 | 0.111* | |
C16 | 0.3771 (8) | 0.7886 (5) | −0.0837 (3) | 0.069 (2) | |
C17 | 0.3754 (7) | 0.8544 (4) | −0.0322 (3) | 0.055 (2) | |
C18 | 0.4704 (11) | 0.7718 (7) | −0.1200 (5) | 0.098 (4) | |
C19 | 0.5643 (12) | 0.8214 (10) | −0.0980 (5) | 0.121 (5) | |
C20 | 0.4652 (6) | 0.9057 (5) | −0.0147 (3) | 0.0535 (17) | |
C21 | 0.5537 (8) | 0.8898 (6) | −0.0445 (4) | 0.078 (2) | |
C22 | 0.6343 (8) | 0.9412 (9) | −0.0293 (5) | 0.104 (3) | |
H33 | 0.6935 | 0.9344 | −0.0523 | 0.124* | |
C23 | 0.6262 (7) | 1.0052 (8) | 0.0220 (5) | 0.094 (3) | |
H36 | 0.6809 | 1.0397 | 0.0363 | 0.113* | |
C24 | 0.5360 (6) | 1.0154 (6) | 0.0506 (4) | 0.0677 (19) | |
H26 | 0.5304 | 1.0583 | 0.0849 | 0.081* | |
C25 | 0.3351 (6) | 0.8160 (5) | 0.1594 (3) | 0.0554 (18) | |
H17 | 0.3106 | 0.7802 | 0.1249 | 0.067* | |
C26 | 0.3698 (7) | 0.7699 (5) | 0.2160 (4) | 0.067 (2) | |
H27 | 0.3689 | 0.7042 | 0.2182 | 0.080* | |
C27 | 0.4033 (6) | 0.8194 (5) | 0.2656 (3) | 0.0543 (17) | |
H20 | 0.4261 | 0.7888 | 0.3029 | 0.065* | |
C28 | 0.4046 (5) | 0.9162 (5) | 0.2621 (3) | 0.0463 (15) | |
C29 | 0.3698 (5) | 0.9579 (4) | 0.2062 (3) | 0.0421 (14) | |
C30 | 0.4395 (6) | 0.9750 (5) | 0.3177 (3) | 0.0555 (17) | |
C31 | 0.4307 (6) | 1.0827 (6) | 0.3127 (3) | 0.0597 (19) | |
C32 | 0.3645 (5) | 1.0629 (4) | 0.1986 (3) | 0.0410 (13) | |
C33 | 0.3887 (5) | 1.1216 (5) | 0.2506 (3) | 0.0484 (15) | |
C34 | 0.3719 (7) | 1.2171 (5) | 0.2433 (3) | 0.062 (2) | |
H7 | 0.3864 | 1.2586 | 0.2772 | 0.075* | |
C35 | 0.3347 (6) | 1.2500 (5) | 0.1872 (3) | 0.061 (2) | |
H24 | 0.3202 | 1.3140 | 0.1823 | 0.073* | |
C36 | 0.3182 (6) | 1.1875 (4) | 0.1369 (3) | 0.0540 (17) | |
H8 | 0.2952 | 1.2108 | 0.0972 | 0.065* | |
C37 | 0.5814 (10) | 0.1897 (9) | 0.8669 (5) | 0.113 (4) | |
C38 | 0.5824 (12) | 0.1612 (15) | 0.8005 (6) | 0.193 (9) | |
H38A | 0.6089 | 0.2114 | 0.7741 | 0.289* | |
H38B | 0.5159 | 0.1470 | 0.7866 | 0.289* | |
H38C | 0.6233 | 0.1058 | 0.7958 | 0.289* | |
N1 | 0.1489 (4) | 1.0048 (4) | 0.0788 (2) | 0.0461 (11) | |
N2 | 0.2743 (4) | 1.0902 (3) | −0.0054 (2) | 0.0449 (12) | |
N3 | 0.2912 (6) | 0.8710 (4) | 0.0003 (2) | 0.0595 (17) | |
N4 | 0.4580 (5) | 0.9700 (4) | 0.0335 (2) | 0.0522 (14) | |
N5 | 0.3368 (5) | 0.9083 (3) | 0.1546 (2) | 0.0467 (14) | |
N6 | 0.3339 (4) | 1.0955 (3) | 0.1430 (2) | 0.0436 (13) | |
N7 | 0.5798 (8) | 0.2050 (7) | 0.9193 (4) | 0.105 (3) | |
O1 | −0.1211 (5) | 1.1624 (5) | −0.0184 (3) | 0.0876 (18) | |
O2 | 0.0074 (5) | 1.2760 (4) | −0.0809 (3) | 0.0803 (17) | |
O3 | 0.4753 (8) | 0.7195 (6) | −0.1651 (4) | 0.140 (4) | |
O4 | 0.6416 (9) | 0.7953 (10) | −0.1217 (5) | 0.203 (6) | |
O5 | 0.4748 (5) | 0.9415 (4) | 0.3661 (2) | 0.0744 (16) | |
O6 | 0.4577 (5) | 1.1315 (4) | 0.3557 (2) | 0.0781 (17) | |
O7 | 0.652 (2) | 1.0724 (6) | 0.1856 (7) | 0.351 (17) | |
O8 | 0.7584 (9) | 0.966 (2) | 0.1956 (13) | 0.42 (2) | |
O9 | 0.6192 (12) | 0.9199 (6) | 0.1767 (7) | 0.200 (6) | |
O10 | 0.6744 (18) | 0.9940 (10) | 0.2718 (6) | 0.312 (12) | |
O11 | 0.3492 (6) | 0.9109 (5) | 0.7595 (3) | 0.105 (2) | |
O12 | 0.2624 (5) | 0.9759 (4) | 0.8471 (3) | 0.0815 (16) | |
O13 | 0.3483 (6) | 1.0713 (4) | 0.7743 (3) | 0.094 (2) | |
O14 | 0.4366 (5) | 0.9798 (5) | 0.8447 (3) | 0.096 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0575 (4) | 0.0389 (3) | 0.0400 (3) | 0.0035 (3) | −0.0038 (3) | 0.0016 (3) |
Cl1 | 0.0823 (14) | 0.0599 (11) | 0.0837 (11) | 0.0149 (10) | 0.0214 (10) | 0.0215 (9) |
Cl2 | 0.0698 (11) | 0.0661 (11) | 0.0515 (7) | −0.0053 (10) | −0.0100 (8) | 0.0028 (8) |
C1 | 0.071 (5) | 0.074 (5) | 0.049 (3) | −0.011 (4) | 0.004 (4) | 0.020 (3) |
C2 | 0.068 (5) | 0.085 (5) | 0.062 (4) | 0.000 (5) | 0.015 (4) | 0.010 (4) |
C3 | 0.061 (5) | 0.089 (5) | 0.054 (4) | 0.008 (4) | 0.007 (4) | −0.004 (3) |
C4 | 0.059 (4) | 0.060 (4) | 0.045 (3) | 0.001 (3) | −0.005 (3) | −0.004 (3) |
C5 | 0.061 (4) | 0.041 (3) | 0.034 (3) | −0.005 (3) | −0.005 (3) | −0.001 (2) |
C6 | 0.056 (5) | 0.071 (5) | 0.049 (3) | 0.018 (4) | 0.003 (3) | 0.000 (3) |
C7 | 0.070 (5) | 0.045 (4) | 0.067 (4) | 0.002 (4) | −0.013 (4) | −0.004 (3) |
C8 | 0.057 (4) | 0.036 (3) | 0.038 (3) | 0.002 (3) | −0.003 (3) | −0.003 (2) |
C9 | 0.065 (5) | 0.039 (3) | 0.045 (3) | 0.003 (3) | −0.010 (3) | −0.002 (2) |
C10 | 0.098 (7) | 0.046 (3) | 0.039 (3) | 0.000 (4) | 0.002 (4) | 0.012 (2) |
C11 | 0.066 (5) | 0.050 (4) | 0.052 (3) | −0.008 (4) | −0.001 (4) | 0.010 (2) |
C12 | 0.061 (5) | 0.058 (4) | 0.043 (3) | −0.002 (3) | −0.007 (3) | −0.001 (3) |
C13 | 0.111 (8) | 0.056 (4) | 0.052 (4) | −0.019 (5) | 0.003 (5) | −0.002 (3) |
C14 | 0.119 (9) | 0.057 (4) | 0.069 (5) | −0.015 (5) | −0.032 (6) | −0.001 (4) |
C15 | 0.171 (12) | 0.045 (4) | 0.061 (4) | −0.022 (6) | −0.003 (7) | −0.006 (3) |
C16 | 0.108 (7) | 0.046 (4) | 0.054 (4) | 0.014 (4) | −0.013 (4) | −0.005 (3) |
C17 | 0.094 (6) | 0.035 (3) | 0.037 (3) | 0.016 (3) | −0.007 (4) | 0.000 (2) |
C18 | 0.145 (11) | 0.069 (6) | 0.081 (6) | 0.035 (7) | 0.003 (7) | −0.002 (5) |
C19 | 0.141 (12) | 0.154 (11) | 0.068 (5) | 0.079 (10) | 0.003 (7) | −0.022 (6) |
C20 | 0.071 (5) | 0.044 (3) | 0.045 (3) | 0.022 (3) | −0.002 (3) | 0.006 (3) |
C21 | 0.087 (6) | 0.072 (5) | 0.075 (5) | 0.039 (5) | −0.003 (5) | −0.006 (4) |
C22 | 0.067 (6) | 0.148 (10) | 0.097 (7) | 0.048 (6) | 0.002 (6) | 0.020 (7) |
C23 | 0.063 (5) | 0.112 (8) | 0.108 (7) | 0.002 (6) | 0.001 (5) | 0.008 (7) |
C24 | 0.071 (5) | 0.060 (4) | 0.072 (4) | 0.001 (4) | −0.017 (4) | −0.005 (3) |
C25 | 0.068 (5) | 0.044 (4) | 0.054 (3) | 0.004 (3) | 0.001 (3) | 0.008 (3) |
C26 | 0.093 (6) | 0.045 (4) | 0.062 (4) | 0.019 (4) | 0.014 (4) | 0.018 (3) |
C27 | 0.062 (5) | 0.059 (4) | 0.042 (3) | 0.010 (3) | 0.001 (3) | 0.012 (3) |
C28 | 0.050 (4) | 0.053 (4) | 0.036 (3) | 0.005 (3) | 0.006 (3) | 0.004 (2) |
C29 | 0.048 (4) | 0.040 (3) | 0.039 (3) | 0.001 (2) | 0.006 (3) | 0.004 (2) |
C30 | 0.059 (4) | 0.067 (5) | 0.041 (3) | 0.000 (4) | 0.003 (3) | 0.010 (3) |
C31 | 0.060 (5) | 0.077 (5) | 0.041 (3) | −0.015 (4) | −0.002 (3) | −0.001 (3) |
C32 | 0.046 (4) | 0.035 (3) | 0.042 (3) | 0.002 (2) | 0.005 (3) | −0.002 (2) |
C33 | 0.051 (4) | 0.050 (4) | 0.045 (3) | −0.004 (3) | 0.003 (3) | −0.010 (3) |
C34 | 0.087 (6) | 0.049 (4) | 0.051 (4) | −0.012 (4) | 0.008 (4) | −0.012 (3) |
C35 | 0.077 (6) | 0.040 (3) | 0.066 (4) | 0.001 (3) | 0.008 (4) | −0.005 (3) |
C36 | 0.075 (5) | 0.041 (3) | 0.046 (3) | 0.003 (3) | 0.004 (4) | 0.003 (2) |
C37 | 0.123 (10) | 0.134 (10) | 0.083 (6) | −0.054 (8) | 0.016 (7) | −0.012 (6) |
C38 | 0.132 (12) | 0.35 (3) | 0.098 (8) | −0.110 (16) | 0.031 (9) | −0.062 (12) |
N1 | 0.047 (3) | 0.045 (3) | 0.046 (2) | −0.005 (2) | −0.006 (2) | 0.011 (2) |
N2 | 0.058 (4) | 0.044 (3) | 0.034 (2) | 0.003 (2) | 0.002 (2) | 0.0067 (19) |
N3 | 0.096 (5) | 0.040 (3) | 0.042 (3) | −0.011 (3) | −0.012 (3) | −0.001 (2) |
N4 | 0.067 (4) | 0.047 (3) | 0.043 (2) | 0.001 (3) | −0.001 (3) | −0.006 (2) |
N5 | 0.067 (4) | 0.032 (2) | 0.041 (2) | 0.006 (2) | −0.001 (3) | 0.0039 (18) |
N6 | 0.056 (4) | 0.035 (2) | 0.039 (2) | 0.002 (2) | 0.007 (2) | 0.0011 (18) |
N7 | 0.114 (7) | 0.123 (7) | 0.079 (5) | −0.009 (6) | 0.007 (6) | −0.028 (5) |
O1 | 0.072 (4) | 0.116 (5) | 0.075 (3) | 0.020 (4) | 0.001 (3) | 0.012 (3) |
O2 | 0.081 (4) | 0.061 (3) | 0.098 (4) | 0.017 (3) | −0.024 (4) | 0.011 (3) |
O3 | 0.208 (11) | 0.110 (6) | 0.102 (5) | 0.059 (6) | 0.006 (6) | −0.050 (4) |
O4 | 0.146 (9) | 0.318 (15) | 0.146 (8) | 0.132 (10) | −0.013 (7) | −0.111 (9) |
O5 | 0.084 (4) | 0.091 (4) | 0.049 (2) | −0.005 (3) | −0.012 (3) | 0.017 (2) |
O6 | 0.094 (5) | 0.091 (4) | 0.049 (2) | −0.007 (4) | −0.013 (3) | −0.011 (3) |
O7 | 0.70 (5) | 0.064 (6) | 0.291 (15) | 0.024 (12) | −0.32 (2) | −0.017 (7) |
O8 | 0.087 (8) | 0.65 (5) | 0.54 (4) | 0.020 (16) | 0.048 (14) | −0.36 (4) |
O9 | 0.290 (17) | 0.062 (5) | 0.249 (12) | −0.044 (7) | 0.061 (12) | −0.011 (6) |
O10 | 0.59 (4) | 0.191 (12) | 0.152 (9) | 0.00 (2) | 0.128 (16) | 0.040 (9) |
O11 | 0.101 (5) | 0.098 (5) | 0.115 (5) | −0.006 (4) | −0.002 (5) | −0.047 (4) |
O12 | 0.098 (4) | 0.085 (4) | 0.061 (3) | −0.004 (3) | 0.003 (3) | 0.006 (3) |
O13 | 0.128 (6) | 0.084 (4) | 0.070 (3) | 0.009 (4) | −0.007 (4) | 0.031 (3) |
O14 | 0.081 (4) | 0.119 (5) | 0.088 (4) | −0.012 (4) | −0.030 (3) | 0.034 (4) |
Zn1—N5 | 2.117 (5) | C16—C18 | 1.478 (15) |
Zn1—N1 | 2.143 (5) | C17—N3 | 1.334 (10) |
Zn1—N2 | 2.146 (5) | C17—C20 | 1.453 (11) |
Zn1—N6 | 2.154 (5) | C18—O3 | 1.184 (11) |
Zn1—N4 | 2.181 (6) | C18—C19 | 1.514 (19) |
Zn1—N3 | 2.202 (5) | C19—O4 | 1.204 (15) |
Cl1—O7 | 1.180 (10) | C19—C21 | 1.468 (13) |
Cl1—O8 | 1.219 (14) | C20—N4 | 1.345 (8) |
Cl1—O10 | 1.338 (12) | C20—C21 | 1.357 (12) |
Cl1—O9 | 1.472 (12) | C21—C22 | 1.341 (16) |
Cl2—O13 | 1.396 (6) | C22—C23 | 1.391 (15) |
Cl2—O14 | 1.407 (6) | C22—H33 | 0.9300 |
Cl2—O11 | 1.415 (6) | C23—C24 | 1.355 (12) |
Cl2—O12 | 1.444 (6) | C23—H36 | 0.9300 |
C1—N1 | 1.330 (8) | C24—N4 | 1.277 (9) |
C1—C2 | 1.382 (12) | C24—H26 | 0.9300 |
C1—H14 | 0.9300 | C25—N5 | 1.307 (8) |
C2—C3 | 1.334 (11) | C25—C26 | 1.409 (9) |
C2—H15 | 0.9300 | C25—H17 | 0.9300 |
C3—C4 | 1.353 (10) | C26—C27 | 1.312 (11) |
C3—H34 | 0.9300 | C26—H27 | 0.9300 |
C4—C5 | 1.395 (10) | C27—C28 | 1.369 (9) |
C4—C6 | 1.476 (10) | C27—H20 | 0.9300 |
C5—N1 | 1.342 (7) | C28—C29 | 1.370 (8) |
C5—C8 | 1.453 (9) | C28—C30 | 1.485 (9) |
C6—O1 | 1.221 (10) | C29—N5 | 1.343 (8) |
C6—C7 | 1.460 (11) | C29—C32 | 1.492 (8) |
C7—O2 | 1.191 (8) | C30—O5 | 1.197 (8) |
C7—C9 | 1.473 (11) | C30—C31 | 1.529 (11) |
C8—N2 | 1.345 (9) | C31—O6 | 1.176 (8) |
C8—C9 | 1.404 (8) | C31—C33 | 1.495 (10) |
C9—C10 | 1.366 (10) | C32—N6 | 1.296 (7) |
C10—C11 | 1.398 (13) | C32—C33 | 1.389 (8) |
C10—H12 | 0.9300 | C33—C34 | 1.376 (10) |
C11—C12 | 1.342 (9) | C34—C35 | 1.336 (10) |
C11—H9 | 0.9300 | C34—H7 | 0.9300 |
C12—N2 | 1.321 (8) | C35—C36 | 1.375 (9) |
C12—H23 | 0.9300 | C35—H24 | 0.9300 |
C13—N3 | 1.271 (11) | C36—N6 | 1.323 (8) |
C13—C14 | 1.414 (11) | C36—H8 | 0.9300 |
C13—H32 | 0.9300 | C37—N7 | 1.096 (12) |
C14—C15 | 1.377 (16) | C37—C38 | 1.419 (15) |
C14—H21 | 0.9300 | C38—H38A | 0.9600 |
C15—C16 | 1.307 (14) | C38—H38B | 0.9600 |
C15—H25 | 0.9300 | C38—H38C | 0.9600 |
C16—C17 | 1.406 (9) | ||
N5—Zn1—N1 | 100.0 (2) | C16—C18—C19 | 118.9 (8) |
N5—Zn1—N2 | 170.57 (18) | O4—C19—C21 | 125.8 (15) |
N1—Zn1—N2 | 77.9 (2) | O4—C19—C18 | 117.3 (12) |
N5—Zn1—N6 | 76.85 (18) | C21—C19—C18 | 116.5 (11) |
N1—Zn1—N6 | 92.0 (2) | N4—C20—C21 | 120.3 (8) |
N2—Zn1—N6 | 93.96 (18) | N4—C20—C17 | 117.3 (6) |
N5—Zn1—N4 | 92.1 (2) | C21—C20—C17 | 122.4 (7) |
N1—Zn1—N4 | 164.96 (17) | C22—C21—C20 | 121.0 (9) |
N2—Zn1—N4 | 91.6 (2) | C22—C21—C19 | 116.8 (11) |
N6—Zn1—N4 | 99.5 (2) | C20—C21—C19 | 122.0 (11) |
N5—Zn1—N3 | 98.09 (19) | C21—C22—C23 | 117.6 (10) |
N1—Zn1—N3 | 92.3 (2) | C21—C22—H33 | 121.2 |
N2—Zn1—N3 | 91.20 (19) | C23—C22—H33 | 121.2 |
N6—Zn1—N3 | 173.9 (2) | C24—C23—C22 | 117.8 (10) |
N4—Zn1—N3 | 77.0 (2) | C24—C23—H36 | 121.1 |
O7—Cl1—O8 | 120 (2) | C22—C23—H36 | 121.1 |
O7—Cl1—O10 | 113.3 (10) | N4—C24—C23 | 124.3 (8) |
O8—Cl1—O10 | 100.6 (16) | N4—C24—H26 | 117.9 |
O7—Cl1—O9 | 112.2 (9) | C23—C24—H26 | 117.9 |
O8—Cl1—O9 | 96.8 (12) | N5—C25—C26 | 121.1 (7) |
O10—Cl1—O9 | 112.1 (10) | N5—C25—H17 | 119.4 |
O13—Cl2—O14 | 108.3 (5) | C26—C25—H17 | 119.4 |
O13—Cl2—O11 | 108.8 (4) | C27—C26—C25 | 120.3 (7) |
O14—Cl2—O11 | 110.6 (5) | C27—C26—H27 | 119.8 |
O13—Cl2—O12 | 109.4 (4) | C25—C26—H27 | 119.8 |
O14—Cl2—O12 | 110.6 (3) | C26—C27—C28 | 119.7 (6) |
O11—Cl2—O12 | 109.1 (4) | C26—C27—H20 | 120.1 |
N1—C1—C2 | 123.9 (7) | C28—C27—H20 | 120.1 |
N1—C1—H14 | 118.1 | C27—C28—C29 | 118.0 (6) |
C2—C1—H14 | 118.1 | C27—C28—C30 | 121.5 (6) |
C3—C2—C1 | 117.4 (7) | C29—C28—C30 | 120.5 (6) |
C3—C2—H15 | 121.3 | N5—C29—C28 | 123.0 (5) |
C1—C2—H15 | 121.3 | N5—C29—C32 | 114.9 (5) |
C2—C3—C4 | 121.1 (8) | C28—C29—C32 | 122.1 (6) |
C2—C3—H34 | 119.4 | O5—C30—C28 | 122.6 (7) |
C4—C3—H34 | 119.4 | O5—C30—C31 | 118.7 (7) |
C3—C4—C5 | 119.2 (7) | C28—C30—C31 | 118.7 (6) |
C3—C4—C6 | 123.1 (7) | O6—C31—C33 | 122.5 (7) |
C5—C4—C6 | 117.6 (6) | O6—C31—C30 | 120.6 (7) |
N1—C5—C4 | 120.5 (6) | C33—C31—C30 | 116.9 (6) |
N1—C5—C8 | 116.7 (6) | N6—C32—C33 | 122.5 (5) |
C4—C5—C8 | 122.8 (6) | N6—C32—C29 | 117.4 (5) |
O1—C6—C7 | 120.3 (7) | C33—C32—C29 | 120.1 (6) |
O1—C6—C4 | 120.1 (8) | C34—C33—C32 | 117.6 (6) |
C7—C6—C4 | 119.7 (7) | C34—C33—C31 | 121.0 (6) |
O2—C7—C6 | 120.1 (8) | C32—C33—C31 | 121.4 (6) |
O2—C7—C9 | 120.8 (8) | C35—C34—C33 | 119.8 (6) |
C6—C7—C9 | 119.1 (6) | C35—C34—H7 | 120.1 |
N2—C8—C9 | 121.1 (6) | C33—C34—H7 | 120.1 |
N2—C8—C5 | 118.4 (5) | C34—C35—C36 | 118.7 (6) |
C9—C8—C5 | 120.5 (6) | C34—C35—H24 | 120.6 |
C10—C9—C8 | 118.6 (7) | C36—C35—H24 | 120.6 |
C10—C9—C7 | 122.3 (6) | N6—C36—C35 | 122.3 (6) |
C8—C9—C7 | 119.1 (6) | N6—C36—H8 | 118.8 |
C9—C10—C11 | 119.3 (6) | C35—C36—H8 | 118.8 |
C9—C10—H12 | 120.3 | N7—C37—C38 | 174.8 (16) |
C11—C10—H12 | 120.3 | C37—C38—H38A | 109.5 |
C12—C11—C10 | 118.1 (7) | C37—C38—H38B | 109.5 |
C12—C11—H9 | 121.0 | H38A—C38—H38B | 109.5 |
C10—C11—H9 | 121.0 | C37—C38—H38C | 109.5 |
N2—C12—C11 | 124.6 (7) | H38A—C38—H38C | 109.5 |
N2—C12—H23 | 117.7 | H38B—C38—H38C | 109.5 |
C11—C12—H23 | 117.7 | C1—N1—C5 | 117.7 (6) |
N3—C13—C14 | 122.3 (10) | C1—N1—Zn1 | 127.9 (5) |
N3—C13—H32 | 118.9 | C5—N1—Zn1 | 114.0 (4) |
C14—C13—H32 | 118.9 | C12—N2—C8 | 118.4 (5) |
C15—C14—C13 | 118.4 (9) | C12—N2—Zn1 | 128.7 (5) |
C15—C14—H21 | 120.8 | C8—N2—Zn1 | 112.8 (4) |
C13—C14—H21 | 120.8 | C13—N3—C17 | 119.6 (6) |
C16—C15—C14 | 118.4 (8) | C13—N3—Zn1 | 127.8 (6) |
C16—C15—H25 | 120.8 | C17—N3—Zn1 | 112.0 (5) |
C14—C15—H25 | 120.8 | C24—N4—C20 | 118.8 (7) |
C15—C16—C17 | 121.0 (10) | C24—N4—Zn1 | 127.6 (5) |
C15—C16—C18 | 119.1 (9) | C20—N4—Zn1 | 113.5 (5) |
C17—C16—C18 | 119.9 (9) | C25—N5—C29 | 117.9 (5) |
N3—C17—C16 | 120.3 (8) | C25—N5—Zn1 | 126.5 (4) |
N3—C17—C20 | 119.6 (6) | C29—N5—Zn1 | 115.3 (4) |
C16—C17—C20 | 120.1 (8) | C32—N6—C36 | 118.9 (5) |
O3—C18—C16 | 122.7 (13) | C32—N6—Zn1 | 114.7 (4) |
O3—C18—C19 | 118.4 (12) | C36—N6—Zn1 | 126.4 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H14···O13i | 0.93 | 2.51 | 3.238 (9) | 135 |
C2—H15···O3ii | 0.93 | 2.58 | 3.030 (13) | 110 |
C10—H12···O7iii | 0.93 | 2.59 | 3.513 (14) | 170 |
C25—H17···O4ii | 0.93 | 2.51 | 3.136 (15) | 125 |
C24—H26···O2iv | 0.93 | 2.36 | 3.036 (10) | 129 |
C34—H7···O9v | 0.93 | 2.47 | 3.302 (12) | 150 |
C38—H38A···O3vi | 0.96 | 2.51 | 2.995 (16) | 112 |
C38—H38B···O13vii | 0.96 | 2.51 | 3.436 (19) | 163 |
Symmetry codes: (i) −x+1/2, −y+2, z−1/2; (ii) x−1/2, −y+3/2, −z; (iii) x−1/2, −y+5/2, −z; (iv) x+1/2, −y+5/2, −z; (v) −x+1, y+1/2, −z+1/2; (vi) −x+1, y−1/2, −z+1/2; (vii) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C12H6N2O2)3](ClO4)2·C2H3N |
Mr | 935.91 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 296 |
a, b, c (Å) | 13.446 (6), 14.125 (6), 20.483 (8) |
V (Å3) | 3890 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.85 |
Crystal size (mm) | 0.30 × 0.12 × 0.12 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.785, 0.905 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23200, 9569, 5533 |
Rint | 0.079 |
(sin θ/λ)max (Å−1) | 0.673 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.075, 0.220, 0.97 |
No. of reflections | 9569 |
No. of parameters | 562 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.16, −0.39 |
Absolute structure | Flack (1983), 4095 Friedel pairs |
Absolute structure parameter | 0.12 (2) |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H14···O13i | 0.93 | 2.51 | 3.238 (9) | 135 |
C2—H15···O3ii | 0.93 | 2.58 | 3.030 (13) | 110 |
C10—H12···O7iii | 0.93 | 2.59 | 3.513 (14) | 170 |
C25—H17···O4ii | 0.93 | 2.51 | 3.136 (15) | 125 |
C24—H26···O2iv | 0.93 | 2.36 | 3.036 (10) | 129 |
C34—H7···O9v | 0.93 | 2.47 | 3.302 (12) | 150 |
C38—H38A···O3vi | 0.96 | 2.51 | 2.995 (16) | 112 |
C38—H38B···O13vii | 0.96 | 2.51 | 3.436 (19) | 163 |
Symmetry codes: (i) −x+1/2, −y+2, z−1/2; (ii) x−1/2, −y+3/2, −z; (iii) x−1/2, −y+5/2, −z; (iv) x+1/2, −y+5/2, −z; (v) −x+1, y+1/2, −z+1/2; (vi) −x+1, y−1/2, −z+1/2; (vii) x, y−1, z. |
Acknowledgements
This work was supported by the Youth Foundation of Hebei Normal University (No. L2006Q20).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The coordination chemistry of the chelating ligand 1,10-phenanthroline-5,6-dione has been examined in several studies (Khalaji et al., 2007; Ma et al., 2010; Rezvani et al., 2010). Carrying an O-quinone and N-pyridine moiety to form stable complexes with a wide variety of metal ions, this ligand is considered to have many interesting biological and electrochemical properties (Boghaei & Asl, 2007; Goss & Abruna, 1985; Kou et al., 2009). As far as we know, 1,10-phenanthroline-5,6-dione usually binds to metals through its imine N atoms, in some cases both the N and O donors are used simultaneously (Brechin et al., 2008). In this paper, we report the crystal structure of the title compound in the hope of exploring some spectroscopic properties of d10 metal complexes.
The title compound consists of a [Zn(C12H6N2O2)3]2+ complex cations, two perchlorate anions and an acetonitrile solvent molecule. As shown in Fig. 1, three bidentate 1,10-phenanthroline-5,6-dione ligands are coordinated to the ZnII atom solely via two N atoms. The coordination geometry around the ZnII atom is distorted octahedral, with bite angles of 76.88 (18)–77.9 (2)° for the three bidentate ligands. The cis bond angles at the ZnII atom fall in the range of 76.85 (18)–100.0 (2)° and the trans bond angles are 164.96 (17), 170.57 (18) and 173.9 (2)°, suggesting a significant deviation from a perfect octahedral coordination. The Zn—N bond lengths range from 2.117 (5) to 2.202 (5) Å, with an average of 2.158 (5) Å. There is no strong hydrogen bond in the crystal, as shown in Fig. 2. Weak intermolecular C—H···O hydrogen bonds (Table 1) and O···π and N···π interactions [O···centroid distances = 2.907 (5) and 2.843 (7) Å, N···centroid distance = 2.861 (10) Å] link the complex molecules, perchlorate anions and acetonitrile solvent molecules into a three-dimensional network.