organic compounds
(E)-N′-(3-Bromo-5-chloro-2-hydroxybenzylidene)nicotinohydrazide
aShasun Pharmaceuticals Ltd, Chennai 600 048, India, bDepartment of Chemistry, Pondicherry University, Pondicherry 605014, India, cDepartment of Inorganic Chemistry, Madurai Kamaraj University, Madurai 625 021, India, dDepartment of Physics, CPCL Polytechnic College, Chennai 600 068, India, and eDepartment of Chemistry, Government Arts College, Melur 625 106, India
*Correspondence e-mail: chakkaravarthi_2005@yahoo.com, rajagopal18@yahoo.com
There are two independent molecules in the 13H9BrClN3O2, in which the dihedral angles between the benzene and pyridine rings are 8.23 (9)° and 52.84 (12)°. Both the molecules exist in an E configuration with respect to the C=N double bond. The two molecules in the are linked via weak C—H⋯O hydrogen bonds. In both the molecules, an intramolecular O—H⋯N hydrogen bond generate an S(6) graph-set motif. In the crystal, intermolecular N—H⋯O and C—H⋯O hydrogen bonds generate bifurcated R12(7) ring motifs. The crystal packing is further stabilized by weak intermolecular N—H⋯O, N—H⋯N, C—H⋯O and π–π [centroid–centroid distance 3.615 (2) Å] interactions.
of the title compound, CRelated literature
For related structures, see: Naveenkumar et al. (2010); Su et al. (2010); Tecer et al. (2010). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536811038268/ng5231sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811038268/ng5231Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536811038268/ng5231Isup3.cml
Nicotinoylhydrazide (5 mmol) was dissolved in 20 mL of dry methanol with stirring and warming over a period of 10 min. To the warm hydrazide solution, 3- bromo-5-chloro salicylaldehyde (5 mmol) in 20 mL of dry methanol was added and the mixture was stirred and slowly refluxed for 2 h. The mixture was then cooled down to room temperature when pale yellow crystalline compound precipitated. The compound was collected by filtration, washed well with cold methanol and dried in vacuum. Single crystals suitable for the X-ray diffraction were obtained by slow evaporation of a solution of the title compound in methanol at room temperature. Melting Point: 503 K.
The amino and hydroxy H-atoms were located in a difference Fourier map, and were refined with N–H distance restraint of 0.86 (1) Å and O-H distance restraint of 0.82 (1) Å. All other H atoms were positioned geometrically with C-H = 0.93 Å, and allowed to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
The geometric parameters of the title compound (I), agree well with the reported similar structures (Naveenkumar et al., 2010; Su et al., 2010; Tecer et al., 2010). The dihedral angles between the (C1/C2/N1/C3/C4/C5) and (C8-C13) is 8.23 (9)° and (C14/C15/C16/C17/N4/C18) and (C21-C26) is 52.84 (12)°. Both the molecules exist in an E configuration with respect to the C=N double bond. The two molecules in the
are linked via weak C15-H15···O2 and C16-H16···O1 hydrogen bonds. In both the molecules, the intramolecular O2-H2B···N3 and O4-H4A···N6 hydrogen bonds generate six-membered rings, each with graph-set motif S(6) (see, Fig. 1).In the π···π [Cg4···Cg4 (2-x,1-y,1-z) = 3.614 (2)Å; Cg4 is the centroid of the ring (C21-C26)] interactions.
(Fig. 2), the intermolecular N2-H2A···O3 and C2-H2···O3 hydrogen bonds generates a seven-membered ring, with bifurcated R1 2(7) ring motif. The crystal packing is further stabilized due to weak intermolecular N-H···N, N-H···O, C-H···O (Table 1 ) andFor related structures, see: Naveenkumar et al. (2010); Su et al. (2010); Tecer et al. (2010). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of (I), with atom labels and 30% probability displacement ellipsoids for non-H atoms. | |
Fig. 2. The packing of (I), viewed down b axis. Hydrogen bonds are shown as dashed lines. H atoms not involved in hydrogen bonding have been omitted. |
C13H9BrClN3O2 | F(000) = 1408 |
Mr = 354.59 | Dx = 1.736 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7402 reflections |
a = 18.2217 (5) Å | θ = 2.3–27.8° |
b = 7.4666 (2) Å | µ = 3.23 mm−1 |
c = 23.6916 (5) Å | T = 295 K |
β = 122.685 (1)° | Block, pale yellow |
V = 2712.93 (12) Å3 | 0.30 × 0.24 × 0.20 mm |
Z = 8 |
Bruker APEXII diffractometer | 8116 independent reflections |
Radiation source: fine-focus sealed tube | 4715 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
ω and φ scans | θmax = 30.4°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −25→25 |
Tmin = 0.444, Tmax = 0.564 | k = −10→10 |
34991 measured reflections | l = −31→33 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0543P)2 + 1.4342P] where P = (Fo2 + 2Fc2)/3 |
8116 reflections | (Δ/σ)max < 0.001 |
377 parameters | Δρmax = 1.27 e Å−3 |
4 restraints | Δρmin = −0.84 e Å−3 |
C13H9BrClN3O2 | V = 2712.93 (12) Å3 |
Mr = 354.59 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 18.2217 (5) Å | µ = 3.23 mm−1 |
b = 7.4666 (2) Å | T = 295 K |
c = 23.6916 (5) Å | 0.30 × 0.24 × 0.20 mm |
β = 122.685 (1)° |
Bruker APEXII diffractometer | 8116 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 4715 reflections with I > 2σ(I) |
Tmin = 0.444, Tmax = 0.564 | Rint = 0.042 |
34991 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 4 restraints |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 1.27 e Å−3 |
8116 reflections | Δρmin = −0.84 e Å−3 |
377 parameters |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.750800 (19) | 0.43505 (5) | 0.256817 (14) | 0.04545 (11) | |
Br2 | 0.92847 (3) | 0.37571 (8) | 0.62069 (2) | 0.08778 (19) | |
Cl1 | 0.97541 (6) | 0.57738 (16) | 0.17505 (5) | 0.0727 (3) | |
Cl2 | 1.13001 (5) | 0.78996 (14) | 0.56676 (6) | 0.0691 (3) | |
O1 | 0.41709 (16) | 0.7827 (4) | −0.01578 (11) | 0.0622 (7) | |
O2 | 0.62074 (13) | 0.5694 (3) | 0.11875 (10) | 0.0427 (5) | |
O3 | 0.56100 (13) | 0.6644 (3) | 0.35290 (10) | 0.0471 (6) | |
O4 | 0.78596 (14) | 0.5308 (4) | 0.49132 (11) | 0.0498 (6) | |
N1 | 0.31049 (16) | 1.0700 (4) | −0.22503 (12) | 0.0412 (6) | |
N2 | 0.50665 (16) | 0.7928 (4) | −0.05295 (12) | 0.0404 (6) | |
N3 | 0.57128 (15) | 0.7165 (4) | 0.00520 (11) | 0.0390 (6) | |
N4 | 0.34447 (16) | 0.7592 (5) | 0.16222 (15) | 0.0613 (9) | |
N5 | 0.65084 (14) | 0.7503 (4) | 0.31986 (11) | 0.0371 (6) | |
N6 | 0.72089 (14) | 0.7123 (4) | 0.38238 (11) | 0.0386 (6) | |
C1 | 0.36031 (18) | 0.9139 (4) | −0.12190 (14) | 0.0357 (6) | |
C2 | 0.37331 (18) | 0.9923 (4) | −0.16888 (14) | 0.0367 (6) | |
H2 | 0.4293 | 0.9904 | −0.1607 | 0.044* | |
C3 | 0.2310 (2) | 1.0706 (5) | −0.23508 (16) | 0.0463 (8) | |
H3 | 0.1857 | 1.1219 | −0.2744 | 0.056* | |
C4 | 0.2119 (2) | 1.0005 (5) | −0.19115 (17) | 0.0489 (8) | |
H4 | 0.1555 | 1.0062 | −0.2003 | 0.059* | |
C5 | 0.2773 (2) | 0.9218 (5) | −0.13355 (16) | 0.0454 (8) | |
H5 | 0.2661 | 0.8742 | −0.1026 | 0.054* | |
C6 | 0.42963 (19) | 0.8249 (4) | −0.05901 (14) | 0.0390 (7) | |
C7 | 0.64618 (19) | 0.6968 (5) | 0.01529 (14) | 0.0421 (7) | |
H7 | 0.6568 | 0.7285 | −0.0176 | 0.051* | |
C8 | 0.71621 (18) | 0.6234 (4) | 0.07931 (14) | 0.0384 (7) | |
C9 | 0.70035 (18) | 0.5672 (4) | 0.12829 (14) | 0.0348 (6) | |
C10 | 0.77050 (19) | 0.5086 (4) | 0.18998 (14) | 0.0367 (6) | |
C11 | 0.85431 (19) | 0.5085 (5) | 0.20395 (15) | 0.0430 (7) | |
H11 | 0.9005 | 0.4695 | 0.2454 | 0.052* | |
C12 | 0.86859 (19) | 0.5669 (5) | 0.15582 (17) | 0.0482 (8) | |
C13 | 0.8007 (2) | 0.6208 (5) | 0.09373 (17) | 0.0478 (8) | |
H13 | 0.8115 | 0.6557 | 0.0612 | 0.057* | |
C14 | 0.49790 (16) | 0.7151 (4) | 0.23663 (13) | 0.0323 (6) | |
C15 | 0.50623 (19) | 0.6727 (4) | 0.18378 (14) | 0.0389 (7) | |
H15 | 0.5603 | 0.6442 | 0.1909 | 0.047* | |
C16 | 0.4322 (2) | 0.6739 (5) | 0.12011 (15) | 0.0513 (9) | |
H16 | 0.4351 | 0.6456 | 0.0831 | 0.062* | |
C17 | 0.3545 (2) | 0.7173 (6) | 0.11241 (17) | 0.0604 (10) | |
H17 | 0.3050 | 0.7176 | 0.0691 | 0.073* | |
C18 | 0.41587 (18) | 0.7556 (5) | 0.22332 (16) | 0.0476 (8) | |
H18 | 0.4106 | 0.7817 | 0.2593 | 0.057* | |
C19 | 0.57123 (17) | 0.7085 (4) | 0.30792 (13) | 0.0340 (6) | |
C20 | 0.79620 (18) | 0.7645 (4) | 0.39838 (15) | 0.0393 (7) | |
H20 | 0.8030 | 0.8357 | 0.3693 | 0.047* | |
C21 | 0.87182 (18) | 0.7109 (4) | 0.46324 (15) | 0.0390 (7) | |
C22 | 0.86279 (18) | 0.5946 (4) | 0.50526 (15) | 0.0404 (7) | |
C23 | 0.9379 (2) | 0.5408 (5) | 0.56524 (15) | 0.0491 (8) | |
C24 | 1.0189 (2) | 0.6014 (5) | 0.58363 (16) | 0.0510 (9) | |
H24 | 1.0682 | 0.5644 | 0.6238 | 0.061* | |
C25 | 1.02624 (18) | 0.7172 (5) | 0.54212 (17) | 0.0473 (8) | |
C26 | 0.95434 (18) | 0.7721 (5) | 0.48211 (16) | 0.0455 (8) | |
H26 | 0.9608 | 0.8496 | 0.4543 | 0.055* | |
H2A | 0.517 (2) | 0.813 (5) | −0.0833 (13) | 0.054 (10)* | |
H5A | 0.655 (2) | 0.804 (4) | 0.2895 (12) | 0.041 (9)* | |
H2B | 0.5850 (19) | 0.618 (5) | 0.0836 (11) | 0.063 (12)* | |
H4A | 0.7488 (19) | 0.569 (5) | 0.4542 (10) | 0.068 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.03930 (17) | 0.0614 (2) | 0.03022 (15) | −0.00234 (15) | 0.01524 (12) | 0.00653 (14) |
Br2 | 0.0636 (3) | 0.1316 (5) | 0.0522 (2) | 0.0067 (3) | 0.0208 (2) | 0.0320 (3) |
Cl1 | 0.0330 (4) | 0.1031 (8) | 0.0796 (7) | 0.0043 (5) | 0.0287 (4) | 0.0239 (6) |
Cl2 | 0.0245 (4) | 0.0654 (6) | 0.0928 (7) | −0.0062 (4) | 0.0157 (4) | −0.0170 (5) |
O1 | 0.0541 (14) | 0.102 (2) | 0.0400 (13) | 0.0159 (14) | 0.0314 (11) | 0.0236 (13) |
O2 | 0.0291 (10) | 0.0656 (15) | 0.0317 (11) | 0.0023 (10) | 0.0152 (9) | 0.0069 (11) |
O3 | 0.0347 (11) | 0.0793 (17) | 0.0298 (10) | −0.0008 (11) | 0.0190 (9) | 0.0019 (11) |
O4 | 0.0314 (11) | 0.0760 (18) | 0.0374 (12) | 0.0003 (11) | 0.0155 (10) | 0.0022 (12) |
N1 | 0.0359 (13) | 0.0505 (16) | 0.0348 (13) | 0.0051 (12) | 0.0176 (11) | 0.0087 (12) |
N2 | 0.0339 (13) | 0.0601 (17) | 0.0249 (12) | −0.0015 (12) | 0.0143 (10) | 0.0063 (11) |
N3 | 0.0341 (13) | 0.0509 (16) | 0.0251 (11) | 0.0002 (11) | 0.0115 (10) | 0.0051 (11) |
N4 | 0.0264 (13) | 0.094 (3) | 0.0499 (17) | 0.0097 (15) | 0.0117 (12) | 0.0140 (17) |
N5 | 0.0219 (11) | 0.0573 (17) | 0.0272 (12) | 0.0003 (11) | 0.0100 (9) | 0.0064 (11) |
N6 | 0.0232 (11) | 0.0540 (16) | 0.0289 (12) | 0.0022 (11) | 0.0077 (9) | −0.0003 (11) |
C1 | 0.0325 (14) | 0.0427 (18) | 0.0319 (14) | −0.0003 (13) | 0.0174 (12) | −0.0018 (12) |
C2 | 0.0311 (14) | 0.0450 (17) | 0.0352 (15) | 0.0014 (13) | 0.0187 (12) | 0.0030 (13) |
C3 | 0.0376 (16) | 0.055 (2) | 0.0391 (16) | 0.0046 (15) | 0.0160 (13) | 0.0046 (15) |
C4 | 0.0322 (15) | 0.065 (2) | 0.0488 (18) | 0.0031 (15) | 0.0212 (14) | 0.0020 (17) |
C5 | 0.0376 (16) | 0.059 (2) | 0.0467 (18) | −0.0010 (15) | 0.0272 (14) | 0.0026 (16) |
C6 | 0.0361 (16) | 0.050 (2) | 0.0295 (14) | −0.0010 (13) | 0.0171 (12) | 0.0006 (13) |
C7 | 0.0371 (16) | 0.058 (2) | 0.0272 (14) | −0.0037 (14) | 0.0148 (12) | 0.0067 (13) |
C8 | 0.0325 (15) | 0.0487 (19) | 0.0306 (14) | −0.0015 (13) | 0.0149 (12) | 0.0043 (13) |
C9 | 0.0294 (13) | 0.0389 (16) | 0.0317 (13) | −0.0021 (12) | 0.0135 (11) | −0.0004 (12) |
C10 | 0.0351 (15) | 0.0404 (17) | 0.0312 (14) | −0.0037 (13) | 0.0156 (12) | 0.0011 (12) |
C11 | 0.0305 (15) | 0.0516 (19) | 0.0368 (16) | −0.0020 (14) | 0.0117 (13) | 0.0049 (14) |
C12 | 0.0285 (14) | 0.062 (2) | 0.0513 (19) | −0.0014 (15) | 0.0196 (14) | 0.0073 (17) |
C13 | 0.0375 (16) | 0.065 (2) | 0.0461 (18) | −0.0016 (15) | 0.0260 (15) | 0.0093 (16) |
C14 | 0.0234 (12) | 0.0395 (17) | 0.0308 (14) | 0.0019 (12) | 0.0125 (11) | 0.0050 (12) |
C15 | 0.0308 (14) | 0.054 (2) | 0.0307 (14) | −0.0013 (13) | 0.0161 (12) | 0.0047 (13) |
C16 | 0.0460 (19) | 0.070 (2) | 0.0288 (15) | −0.0042 (17) | 0.0143 (14) | 0.0041 (15) |
C17 | 0.0329 (17) | 0.087 (3) | 0.0378 (18) | −0.0017 (18) | 0.0037 (14) | 0.0145 (18) |
C18 | 0.0293 (15) | 0.067 (2) | 0.0448 (18) | 0.0084 (15) | 0.0190 (14) | 0.0077 (16) |
C19 | 0.0279 (13) | 0.0443 (17) | 0.0304 (14) | 0.0024 (12) | 0.0162 (11) | −0.0003 (12) |
C20 | 0.0288 (14) | 0.0459 (19) | 0.0368 (15) | −0.0010 (13) | 0.0135 (12) | −0.0013 (13) |
C21 | 0.0248 (13) | 0.0464 (18) | 0.0373 (15) | 0.0014 (13) | 0.0112 (12) | −0.0089 (13) |
C22 | 0.0283 (14) | 0.054 (2) | 0.0342 (15) | 0.0028 (13) | 0.0137 (12) | −0.0076 (13) |
C23 | 0.0391 (17) | 0.065 (2) | 0.0342 (15) | 0.0096 (16) | 0.0142 (13) | −0.0013 (15) |
C24 | 0.0306 (15) | 0.065 (2) | 0.0368 (16) | 0.0095 (15) | 0.0047 (13) | −0.0106 (16) |
C25 | 0.0209 (13) | 0.051 (2) | 0.0547 (19) | −0.0005 (13) | 0.0102 (13) | −0.0177 (17) |
C26 | 0.0285 (14) | 0.048 (2) | 0.0509 (19) | −0.0029 (14) | 0.0152 (14) | −0.0088 (15) |
Br1—C10 | 1.885 (3) | C5—H5 | 0.9300 |
Br2—C23 | 1.876 (4) | C7—C8 | 1.462 (4) |
Cl1—C12 | 1.745 (3) | C7—H7 | 0.9300 |
Cl2—C25 | 1.738 (3) | C8—C13 | 1.384 (4) |
O1—C6 | 1.205 (4) | C8—C9 | 1.403 (4) |
O2—C9 | 1.342 (3) | C9—C10 | 1.394 (4) |
O2—H2B | 0.814 (10) | C10—C11 | 1.377 (4) |
O3—C19 | 1.222 (3) | C11—C12 | 1.370 (5) |
O4—C22 | 1.341 (4) | C11—H11 | 0.9300 |
O4—H4A | 0.818 (10) | C12—C13 | 1.375 (4) |
N1—C2 | 1.331 (4) | C13—H13 | 0.9300 |
N1—C3 | 1.336 (4) | C14—C15 | 1.377 (4) |
N2—C6 | 1.353 (4) | C14—C18 | 1.384 (4) |
N2—N3 | 1.363 (3) | C14—C19 | 1.484 (4) |
N2—H2A | 0.853 (10) | C15—C16 | 1.378 (4) |
N3—C7 | 1.261 (4) | C15—H15 | 0.9300 |
N4—C18 | 1.325 (4) | C16—C17 | 1.366 (5) |
N4—C17 | 1.325 (5) | C16—H16 | 0.9300 |
N5—C19 | 1.356 (4) | C17—H17 | 0.9300 |
N5—N6 | 1.364 (3) | C18—H18 | 0.9300 |
N5—H5A | 0.860 (10) | C20—C21 | 1.461 (4) |
N6—C20 | 1.272 (4) | C20—H20 | 0.9300 |
C1—C5 | 1.385 (4) | C21—C26 | 1.394 (4) |
C1—C2 | 1.386 (4) | C21—C22 | 1.396 (5) |
C1—C6 | 1.492 (4) | C22—C23 | 1.398 (4) |
C2—H2 | 0.9300 | C23—C24 | 1.371 (5) |
C3—C4 | 1.367 (5) | C24—C25 | 1.369 (5) |
C3—H3 | 0.9300 | C24—H24 | 0.9300 |
C4—C5 | 1.368 (5) | C25—C26 | 1.376 (4) |
C4—H4 | 0.9300 | C26—H26 | 0.9300 |
C9—O2—H2B | 112 (3) | C11—C12—C13 | 121.2 (3) |
C22—O4—H4A | 107 (3) | C11—C12—Cl1 | 118.9 (2) |
C2—N1—C3 | 116.4 (3) | C13—C12—Cl1 | 119.9 (3) |
C6—N2—N3 | 117.5 (2) | C12—C13—C8 | 120.4 (3) |
C6—N2—H2A | 125 (2) | C12—C13—H13 | 119.8 |
N3—N2—H2A | 117 (2) | C8—C13—H13 | 119.8 |
C7—N3—N2 | 119.8 (2) | C15—C14—C18 | 118.6 (3) |
C18—N4—C17 | 116.2 (3) | C15—C14—C19 | 123.6 (2) |
C19—N5—N6 | 116.5 (2) | C18—C14—C19 | 117.7 (3) |
C19—N5—H5A | 120 (2) | C14—C15—C16 | 118.1 (3) |
N6—N5—H5A | 124 (2) | C14—C15—H15 | 121.0 |
C20—N6—N5 | 119.1 (3) | C16—C15—H15 | 121.0 |
C5—C1—C2 | 117.7 (3) | C17—C16—C15 | 118.6 (3) |
C5—C1—C6 | 117.6 (3) | C17—C16—H16 | 120.7 |
C2—C1—C6 | 124.8 (3) | C15—C16—H16 | 120.7 |
N1—C2—C1 | 124.0 (3) | N4—C17—C16 | 124.6 (3) |
N1—C2—H2 | 118.0 | N4—C17—H17 | 117.7 |
C1—C2—H2 | 118.0 | C16—C17—H17 | 117.7 |
N1—C3—C4 | 124.1 (3) | N4—C18—C14 | 123.8 (3) |
N1—C3—H3 | 118.0 | N4—C18—H18 | 118.1 |
C4—C3—H3 | 118.0 | C14—C18—H18 | 118.1 |
C3—C4—C5 | 118.7 (3) | O3—C19—N5 | 122.0 (3) |
C3—C4—H4 | 120.6 | O3—C19—C14 | 122.3 (3) |
C5—C4—H4 | 120.6 | N5—C19—C14 | 115.7 (2) |
C4—C5—C1 | 119.1 (3) | N6—C20—C21 | 118.8 (3) |
C4—C5—H5 | 120.4 | N6—C20—H20 | 120.6 |
C1—C5—H5 | 120.4 | C21—C20—H20 | 120.6 |
O1—C6—N2 | 121.7 (3) | C26—C21—C22 | 119.8 (3) |
O1—C6—C1 | 121.2 (3) | C26—C21—C20 | 119.3 (3) |
N2—C6—C1 | 117.1 (2) | C22—C21—C20 | 120.9 (3) |
N3—C7—C8 | 119.3 (3) | O4—C22—C21 | 123.7 (3) |
N3—C7—H7 | 120.3 | O4—C22—C23 | 117.8 (3) |
C8—C7—H7 | 120.3 | C21—C22—C23 | 118.4 (3) |
C13—C8—C9 | 119.3 (3) | C24—C23—C22 | 121.6 (3) |
C13—C8—C7 | 119.5 (3) | C24—C23—Br2 | 119.0 (2) |
C9—C8—C7 | 121.0 (3) | C22—C23—Br2 | 119.4 (3) |
O2—C9—C10 | 118.4 (3) | C25—C24—C23 | 119.1 (3) |
O2—C9—C8 | 122.9 (2) | C25—C24—H24 | 120.5 |
C10—C9—C8 | 118.6 (3) | C23—C24—H24 | 120.5 |
C11—C10—C9 | 121.5 (3) | C24—C25—C26 | 121.5 (3) |
C11—C10—Br1 | 119.2 (2) | C24—C25—Cl2 | 117.8 (2) |
C9—C10—Br1 | 119.3 (2) | C26—C25—Cl2 | 120.7 (3) |
C12—C11—C10 | 119.0 (3) | C25—C26—C21 | 119.6 (3) |
C12—C11—H11 | 120.5 | C25—C26—H26 | 120.2 |
C10—C11—H11 | 120.5 | C21—C26—H26 | 120.2 |
C6—N2—N3—C7 | −174.5 (3) | C7—C8—C13—C12 | 174.4 (3) |
C19—N5—N6—C20 | −173.2 (3) | C18—C14—C15—C16 | 0.4 (5) |
C3—N1—C2—C1 | 0.2 (5) | C19—C14—C15—C16 | 176.2 (3) |
C5—C1—C2—N1 | −1.8 (5) | C14—C15—C16—C17 | 0.2 (5) |
C6—C1—C2—N1 | 179.5 (3) | C18—N4—C17—C16 | −0.8 (6) |
C2—N1—C3—C4 | 1.3 (5) | C15—C16—C17—N4 | 0.0 (6) |
N1—C3—C4—C5 | −1.1 (6) | C17—N4—C18—C14 | 1.4 (6) |
C3—C4—C5—C1 | −0.6 (5) | C15—C14—C18—N4 | −1.3 (5) |
C2—C1—C5—C4 | 2.0 (5) | C19—C14—C18—N4 | −177.4 (3) |
C6—C1—C5—C4 | −179.2 (3) | N6—N5—C19—O3 | 10.6 (4) |
N3—N2—C6—O1 | −2.4 (5) | N6—N5—C19—C14 | −167.8 (3) |
N3—N2—C6—C1 | 178.0 (3) | C15—C14—C19—O3 | −145.3 (3) |
C5—C1—C6—O1 | −9.7 (5) | C18—C14—C19—O3 | 30.6 (5) |
C2—C1—C6—O1 | 169.1 (3) | C15—C14—C19—N5 | 33.1 (4) |
C5—C1—C6—N2 | 169.9 (3) | C18—C14—C19—N5 | −151.0 (3) |
C2—C1—C6—N2 | −11.3 (5) | N5—N6—C20—C21 | −175.0 (3) |
N2—N3—C7—C8 | 176.8 (3) | N6—C20—C21—C26 | −178.0 (3) |
N3—C7—C8—C13 | −172.5 (3) | N6—C20—C21—C22 | 4.2 (5) |
N3—C7—C8—C9 | 3.0 (5) | C26—C21—C22—O4 | 179.3 (3) |
C13—C8—C9—O2 | 178.5 (3) | C20—C21—C22—O4 | −2.9 (5) |
C7—C8—C9—O2 | 3.0 (5) | C26—C21—C22—C23 | −0.9 (5) |
C13—C8—C9—C10 | −0.6 (5) | C20—C21—C22—C23 | 176.9 (3) |
C7—C8—C9—C10 | −176.1 (3) | O4—C22—C23—C24 | −179.3 (3) |
O2—C9—C10—C11 | −177.8 (3) | C21—C22—C23—C24 | 0.9 (5) |
C8—C9—C10—C11 | 1.3 (5) | O4—C22—C23—Br2 | 2.9 (4) |
O2—C9—C10—Br1 | 0.1 (4) | C21—C22—C23—Br2 | −176.9 (2) |
C8—C9—C10—Br1 | 179.3 (2) | C22—C23—C24—C25 | −0.1 (5) |
C9—C10—C11—C12 | −0.2 (5) | Br2—C23—C24—C25 | 177.8 (3) |
Br1—C10—C11—C12 | −178.2 (3) | C23—C24—C25—C26 | −0.8 (5) |
C10—C11—C12—C13 | −1.6 (5) | C23—C24—C25—Cl2 | −179.6 (3) |
C10—C11—C12—Cl1 | 176.8 (3) | C24—C25—C26—C21 | 0.9 (5) |
C11—C12—C13—C8 | 2.4 (6) | Cl2—C25—C26—C21 | 179.6 (2) |
Cl1—C12—C13—C8 | −176.0 (3) | C22—C21—C26—C25 | 0.0 (5) |
C9—C8—C13—C12 | −1.2 (5) | C20—C21—C26—C25 | −177.8 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2B···N3 | 0.81 (1) | 1.89 (3) | 2.576 (3) | 142 (4) |
O4—H4A···N6 | 0.82 (1) | 1.83 (2) | 2.569 (3) | 149 (4) |
C15—H15···O2 | 0.93 | 2.55 | 3.286 (4) | 137 |
C16—H16···O1 | 0.93 | 2.41 | 3.185 (4) | 141 |
N2—H2A···O3i | 0.85 (1) | 2.06 (1) | 2.906 (3) | 171 (3) |
C2—H2···O3i | 0.93 | 2.52 | 3.380 (4) | 153 |
N5—H5A···N1ii | 0.86 (1) | 2.16 (1) | 3.009 (4) | 170 (3) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C13H9BrClN3O2 |
Mr | 354.59 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 18.2217 (5), 7.4666 (2), 23.6916 (5) |
β (°) | 122.685 (1) |
V (Å3) | 2712.93 (12) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 3.23 |
Crystal size (mm) | 0.30 × 0.24 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.444, 0.564 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 34991, 8116, 4715 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.711 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.125, 1.02 |
No. of reflections | 8116 |
No. of parameters | 377 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.27, −0.84 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2B···N3 | 0.81 (1) | 1.89 (3) | 2.576 (3) | 142 (4) |
O4—H4A···N6 | 0.82 (1) | 1.83 (2) | 2.569 (3) | 149 (4) |
C15—H15···O2 | 0.93 | 2.55 | 3.286 (4) | 137 |
C16—H16···O1 | 0.93 | 2.41 | 3.185 (4) | 141 |
N2—H2A···O3i | 0.85 (1) | 2.06 (1) | 2.906 (3) | 171 (3) |
C2—H2···O3i | 0.93 | 2.52 | 3.380 (4) | 153 |
N5—H5A···N1ii | 0.86 (1) | 2.16 (1) | 3.009 (4) | 170 (3) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, −y+2, −z. |
Acknowledgements
The authors wish to acknowledge the SAIF, IIT, Madras, for the data collection.
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2004). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The geometric parameters of the title compound (I), agree well with the reported similar structures (Naveenkumar et al., 2010; Su et al., 2010; Tecer et al., 2010). The dihedral angles between the (C1/C2/N1/C3/C4/C5) and (C8-C13) is 8.23 (9)° and (C14/C15/C16/C17/N4/C18) and (C21-C26) is 52.84 (12)°. Both the molecules exist in an E configuration with respect to the C=N double bond. The two molecules in the asymmetric unit are linked via weak C15-H15···O2 and C16-H16···O1 hydrogen bonds. In both the molecules, the intramolecular O2-H2B···N3 and O4-H4A···N6 hydrogen bonds generate six-membered rings, each with graph-set motif S(6) (see, Fig. 1).
In the crystal structure (Fig. 2), the intermolecular N2-H2A···O3 and C2-H2···O3 hydrogen bonds generates a seven-membered ring, with bifurcated R1 2(7) ring motif. The crystal packing is further stabilized due to weak intermolecular N-H···N, N-H···O, C-H···O (Table 1 ) and π···π [Cg4···Cg4 (2-x,1-y,1-z) = 3.614 (2)Å; Cg4 is the centroid of the ring (C21-C26)] interactions.