organic compounds
7-Aminoheptylazanium iodide
aInstitut für Anorganische Chemie und Strukturchemie, Lehrstuhl II: Material- und Strukturforschung, Heinrich-Heine-Universität Düsseldorf, Universitätsstrasse 1, D-40225 Düsseldorf, Germany
*Correspondence e-mail: reissg@uni-duesseldorf.de
The 3N-(CH2)7-NH2]I, has been determined from the diffraction experiment, the refining to −0.02 (2). In the crystal, adjacent symmetry-related cations are connected by head-to-tail R′H2N+—H⋯NH2R hydrogen bonds, forming chains along [010]. The remaining four H atoms attached to the amino and the azanium group form weak hydrogen bonds to neighbouring iodide anions, producing a three-dimensional hydrogen-bonded network. The amino group and the aliphatic chain of the 7-aminoheptylazanium cation show an exact all-trans conformation, within experimental uncertainties. The azanium group, to fulfill the needs of hydrogen bonding, is twisted out of the plane defined by the C atoms of the aliphatic chain, the C—C—C—N torsion angle being −65.4 (4)°.
of the title compound, [HRelated literature
For the crystal structures of α-azaniumyl-ω-aminoalkanes, see: Luciawati et al. (2011); Pienack et al. (2007); Natarajan et al. (1996); Qian et al. (2007). For α,ω-diazaniumylalkane-containing compounds, see: Frank & Graf (2004); Jiang et al. (2010); Reiss (2010); Reiss & Engel (2002); Reiss & Engel (2004); Seidlhofer et al. (2010); Takeoka et al. (2005); Vizi et al. (2006). For dye-sensitized solar cells, see: Yang et al. (2011); Gorlov & Kloo (2008); Grätzel (2004). For graph-set analysis, see: Etter et al. (1990). For the profile fit on the powder diffraction data, see: Kraus & Nolze (2000). For background to hydrogen bonds, see: Steiner (2002).
Experimental
Crystal data
|
Data collection
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2010); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536811037329/wn2452sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811037329/wn2452Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536811037329/wn2452Isup3.mol
Supporting information file. DOI: https://doi.org/10.1107/S1600536811037329/wn2452Isup4.cml
7-Aminoheptylazanium iodide, (H3N-(CH2)7-NH2)I was prepared by dissolving 1.77 mmol (0.23 mL) 1,7-diaminoheptane in 1 ml concentrated (57%) hydroiodic acid at room temperature. From this solution crystalline raw material was obtained by evaporation within a few days at room temperature. Recrystallization from fresh hydroiodic acid (57%) yielded block-shaped, almost colourless crystals.
Depending on the reaction conditions, the title compound is sometimes contaminated with a small amount of the dark-coloured α,ω-diazaniumylheptane tetraiodide, (H3N-(CH2)7-NH3)I4 (Reiss, 2010). To verify the purity of the synthesized material, powder diffraction data of a representive part of the bulk phase were collected on a Huber G600 diffractometer (transmission, Cu Kα1, step width: 0.03°, 20 sec./step). A profile fit (Kraus & Nolze, 2000) on the powder diffraction data based on the structure model obtained from the single-crystal experiment proved the identity of the bulk phase with the investigated single-crystal (Fig. 4). This finding is supported by the Raman spectrum collected which does not show the I42--specific absorption band at 175 cm-1.
All hydrogen atoms were located from a difference Fourier synthesis. The positional parameters of hydrogen atoms of the NH2 and the NH3 group were refined with soft N—H distance restraints; the final range of N—H distances is 0.87 (2) - 0.90 (2) Å. All hydrogen atoms of the CH2 groups were refined using a riding model; C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C). Anisotropic displacement parameters of all non-hydrogen atoms and individual isotropic displacement parameters for all hydrogen atoms involved in the hydrogen bonds were refined unrestrictedly. The
refined to -0.02 (2).There is general interest in diazanium iodides because it is well documented that they have a significant influence on the I3-/I- redox system in binary ionic liquids, which are used as electrolytes for dye-sensitized solar cells (Yang et al., 2011; Gorlov & Kloo, 2008; Grätzel, 2004). Most structures reported in the α,ω-diaminoalkane/HX system are composed of α,ω-diazaniumylalkane dications and complex counteranions. Salts of α,ω-diazaniumylalkanes represent an interesting class of organic-inorganic hybride materials, with a number of different structure design examples: hydrogen-bonded frameworks as host systems for unusual species (Frank & Graf); layered materials (Takeoka et al., 2005), large-pore zeolites (Jiang et al., 2010); non-metal frameworks (e.g. Vizi et al., 2006) and metal-frameworks (Seidlhofer et al., 2010).
Our longstanding interest in the structural chemistry of α,ω-diazaniumylalkanes is focused on their versatility as templates for the synthesis of new polyiodides (Reiss & Engel, 2002; Reiss & Engel, 2004; Reiss, 2010). However, only a limited number of high-quality determinations on α-azaniumyl-ω-aminoalkane salts have been described (Luciawati et al., 2011; Pienack et al., 2007). Furthermore, the positions of the hydrogen atoms of the hydrogen bond donating groups are not well resolved in all cases (Natarajan et al., 1996, Qian et al., 2007).
This contribution presents a rare example of a α-azaniumyl-ω-aminoalkane without any disorder. The of the title compound consists of one 7-aminoheptylazanium cation and one iodide anion. The bond lengths and angles within the organic cation are, with C—C bond lengths between 1.497 (5) Å to 1.517 (4) Å and slightly shorter C—N distances, 1.462 (4) Å and 1.481 (4) Å, as expected. The azanium group, to fulfill the needs of hydrogen bonding, is twisted out of the plane defined by the carbon atoms of the all-trans conformation aliphatic chain, the C5—C6—C7—N2 torsion angle being -65.4 (4)° (Fig.1 and Fig. 3)
of anCations are connected to symmetry-related units by head-to-tail R'H2N+—H···NH2R hydrogen bonds. As a result of this primary connection, one-dimensional zigzag chains along [010] are formed (Fig. 1). According to a generally accepted classification (Steiner, 2002), these N+—H···N hydrogen bonds can be described as medium strong. Both hydrogen atoms of the amino group and two of the three hydrogen atoms of the azaniumyl group form hydrogen bonds with neighbouring iodide anions. These weak N—H···I hydrogen bonds (Table 1) connect the above-mentioned chains into a three-dimensional framework (Fig. 2 and 3). This framework can be classified by graph sets (Etter et al. 1990) as built of two smaller ring motifs [R24(8) and R46(12); (Fig. 2)] in the hydrophilic region of the structure and a ring motif R24(24) that includes the alkyl chains (Fig. 3).
For the crystal structures of α-azaniumyl-ω-aminoalkanes, see: Luciawati et al. (2011); Pienack et al. (2007); Natarajan et al. (19961); Qian et al. (2007). For α,ω-diazaniumylalkane-containing compounds, see: Frank & Graf (2004); Jiang et al. (2010); Reiss (2010); Reiss & Engel (2002); Reiss & Engel (2004); Seidlhofer et al. (2010); Takeoka et al. (2005); Vizi et al. (2006). For dye-sensitized solar cells, see: Yang et al. (2011); Gorlov & Kloo (2008); Grätzel (2004). For graph-set analysis, see: Etter et al. (1990). For the profile fit on the powder diffraction data, see: Kraus & Nolze (2000). For background to hydrogen bonds, see: Steiner (2002).
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2010); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. The structure of the asymmetric unit, showing 50% probability displacement ellipsoids. Hydrogen atoms are shown as spheres of arbitrary radius. Symmetry-related neighbouring atoms are drawn with arbitrary radius and dashed lines indicate hydrogen bonds. Symmetry codes : ' = 2 - x, 1/2 + y, 1 - z, '' = 2 - x, 1/2 + y, 1 - z. | |
Fig. 2. Hydrogen bonding ring motifs. Graph-sets: R24(8) and R46(12)) of the hydrophilic part of the structure are shown. Symmetry codes: ' = 1 - x, 1/2 + y, -z, '' = 1 - x, 1/2 + y, 1 - z. | |
Fig. 3. Hydrogen bonding motif of neighboring 7-aminoheptylazanium connected by iodide anions, graph set R24(24). Symmetry codes: ' = 1 - x, 1/2 + y, 2 - z, '' = x, 1 + y, 1 + z. | |
Fig. 4. Powder diffraction diagram of the title compound (black line: experimental; red line: profile fit). |
C7H19N2+·I− | F(000) = 256 |
Mr = 258.14 | Dx = 1.506 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 29947 reflections |
a = 5.53418 (8) Å | θ = 3.3–32.6° |
b = 18.7308 (3) Å | µ = 2.76 mm−1 |
c = 5.51570 (8) Å | T = 290 K |
β = 95.2195 (14)° | Block, colourless |
V = 569.39 (2) Å3 | 0.77 × 0.41 × 0.24 mm |
Z = 2 |
Oxford Diffraction Xcalibur Eos diffractometer | 2331 independent reflections |
Radiation source: fine-focus sealed tube | 2325 reflections with I > 2σ(I) |
Equatorial mounted graphite monochromator | Rint = 0.028 |
Detector resolution: 16.2711 pixels mm-1 | θmax = 26.5°, θmin = 4.9° |
ω scans | h = −6→6 |
Absorption correction: analytical [CrysAlis PRO (Oxford Diffraction, 2009); analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)] | k = −23→23 |
Tmin = 0.227, Tmax = 0.543 | l = −6→6 |
31566 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.017 | w = 1/[σ2(Fo2) + (0.010P)2 + 0.450P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.039 | (Δ/σ)max = 0.001 |
S = 1.03 | Δρmax = 0.33 e Å−3 |
2331 reflections | Δρmin = −0.48 e Å−3 |
112 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
6 restraints | Extinction coefficient: 0.0965 (15) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1130 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.02 (2) |
C7H19N2+·I− | V = 569.39 (2) Å3 |
Mr = 258.14 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 5.53418 (8) Å | µ = 2.76 mm−1 |
b = 18.7308 (3) Å | T = 290 K |
c = 5.51570 (8) Å | 0.77 × 0.41 × 0.24 mm |
β = 95.2195 (14)° |
Oxford Diffraction Xcalibur Eos diffractometer | 2331 independent reflections |
Absorption correction: analytical [CrysAlis PRO (Oxford Diffraction, 2009); analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)] | 2325 reflections with I > 2σ(I) |
Tmin = 0.227, Tmax = 0.543 | Rint = 0.028 |
31566 measured reflections |
R[F2 > 2σ(F2)] = 0.017 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.039 | Δρmax = 0.33 e Å−3 |
S = 1.03 | Δρmin = −0.48 e Å−3 |
2331 reflections | Absolute structure: Flack (1983), 1130 Friedel pairs |
112 parameters | Absolute structure parameter: −0.02 (2) |
6 restraints |
Experimental. The Raman spectrum was measured using a Bruker MULTIRAM spectrometer (Nd:YAG-Laser at 1064 nm; RT-InGaAs-detector); 4000–70 cm-1: 3326(w), 3259(w), 2958(m), 2896(s), 2882(s), 2850(s), 2761(w), 1590(w), 1542(w), 1479(m), 1466(m), 1445(s), 1347(w), 1304(m), 1067(m), 1039(m), 961(w), 913(w), 858(w), 838(w), 340(w), 286(w), 253(w), 109(s). IR spectroscopic data were collected on a Digilab FT3400 spectrometer using a MIRacle ATR unit (Pike Technologies); 4000–560 cm-1: 3321(m), 3258(m), 3021(m, br), 2923(s), 2853(s), 1645(m, sh), 1568(m, br), 1487(m), 1465(m), 1384(m), 1359(w), 1334(m, sh), 1302(m), 1244(w), 1156(w), 929(w, br), 817(w), 723(w). |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.09785 (3) | 0.252871 (19) | 0.24986 (3) | 0.06035 (9) | |
N1 | 0.4322 (6) | 0.34300 (16) | 0.7843 (6) | 0.0548 (7) | |
H11 | 0.330 (8) | 0.342 (3) | 0.653 (6) | 0.108 (19)* | |
H12 | 0.335 (7) | 0.337 (2) | 0.905 (6) | 0.075 (12)* | |
C1 | 0.5909 (7) | 0.40516 (19) | 0.8220 (7) | 0.0524 (8) | |
H1A | 0.7136 | 0.3956 | 0.9550 | 0.063* | |
H1B | 0.4962 | 0.4458 | 0.8673 | 0.063* | |
C2 | 0.7123 (7) | 0.42306 (16) | 0.5974 (7) | 0.0486 (7) | |
H2A | 0.5885 | 0.4340 | 0.4667 | 0.058* | |
H2B | 0.8003 | 0.3814 | 0.5490 | 0.058* | |
C3 | 0.8869 (7) | 0.48553 (17) | 0.6285 (7) | 0.0515 (8) | |
H3A | 0.7997 | 0.5269 | 0.6806 | 0.062* | |
H3B | 1.0128 | 0.4742 | 0.7567 | 0.062* | |
C4 | 1.0042 (7) | 0.50457 (18) | 0.4032 (7) | 0.0527 (8) | |
H4A | 0.8785 | 0.5151 | 0.2739 | 0.063* | |
H4B | 1.0945 | 0.4636 | 0.3528 | 0.063* | |
C5 | 1.1744 (6) | 0.56805 (17) | 0.4352 (7) | 0.0488 (7) | |
H5A | 1.0862 | 0.6083 | 0.4939 | 0.059* | |
H5B | 1.3049 | 0.5565 | 0.5586 | 0.059* | |
C6 | 1.2828 (7) | 0.58973 (17) | 0.2052 (7) | 0.0533 (8) | |
H6A | 1.1515 | 0.5989 | 0.0803 | 0.064* | |
H6B | 1.3756 | 0.5498 | 0.1506 | 0.064* | |
C7 | 1.4460 (7) | 0.65486 (18) | 0.2270 (7) | 0.0517 (8) | |
H7A | 1.5742 | 0.6471 | 0.3563 | 0.062* | |
H7B | 1.5210 | 0.6612 | 0.0763 | 0.062* | |
N2 | 1.3108 (5) | 0.72044 (13) | 0.2795 (5) | 0.0463 (6) | |
H21 | 1.416 (6) | 0.755 (2) | 0.249 (6) | 0.087 (12)* | |
H22 | 1.196 (5) | 0.7290 (18) | 0.164 (5) | 0.066 (12)* | |
H23 | 1.253 (5) | 0.7189 (16) | 0.427 (4) | 0.047 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.06054 (12) | 0.07533 (14) | 0.04638 (11) | −0.01293 (14) | 0.01147 (7) | 0.00061 (17) |
N1 | 0.0556 (17) | 0.0441 (14) | 0.067 (2) | −0.0089 (14) | 0.0171 (17) | 0.0002 (13) |
C1 | 0.061 (2) | 0.0411 (17) | 0.0565 (19) | −0.0083 (15) | 0.0117 (17) | −0.0083 (14) |
C2 | 0.0564 (19) | 0.0362 (15) | 0.055 (2) | −0.0084 (13) | 0.0130 (16) | −0.0013 (13) |
C3 | 0.057 (2) | 0.0381 (16) | 0.060 (2) | −0.0103 (14) | 0.0082 (17) | −0.0036 (14) |
C4 | 0.0567 (19) | 0.0385 (15) | 0.064 (2) | −0.0104 (14) | 0.0097 (19) | −0.0037 (16) |
C5 | 0.0537 (19) | 0.0380 (16) | 0.0556 (19) | −0.0085 (13) | 0.0102 (16) | −0.0005 (13) |
C6 | 0.062 (2) | 0.0372 (16) | 0.063 (2) | −0.0075 (15) | 0.0138 (18) | −0.0065 (14) |
C7 | 0.0499 (18) | 0.0391 (16) | 0.068 (2) | −0.0047 (14) | 0.0155 (17) | −0.0021 (14) |
N2 | 0.0582 (16) | 0.0370 (11) | 0.0448 (14) | 0.0007 (12) | 0.0106 (12) | 0.0018 (10) |
N1—C1 | 1.462 (4) | C4—H4B | 0.9700 |
N1—H11 | 0.877 (19) | C5—C6 | 1.508 (5) |
N1—H12 | 0.898 (19) | C5—H5A | 0.9700 |
C1—C2 | 1.500 (5) | C5—H5B | 0.9700 |
C1—H1A | 0.9700 | C6—C7 | 1.516 (5) |
C1—H1B | 0.9700 | C6—H6A | 0.9700 |
C2—C3 | 1.517 (4) | C6—H6B | 0.9700 |
C2—H2A | 0.9700 | C7—N2 | 1.481 (4) |
C2—H2B | 0.9700 | C7—H7A | 0.9700 |
C3—C4 | 1.496 (5) | C7—H7B | 0.9700 |
C3—H3A | 0.9700 | N2—H21 | 0.90 (2) |
C3—H3B | 0.9700 | N2—H22 | 0.871 (18) |
C4—C5 | 1.517 (4) | N2—H23 | 0.901 (18) |
C4—H4A | 0.9700 | ||
C1—N1—H11 | 118 (4) | H4A—C4—H4B | 107.7 |
C1—N1—H12 | 112 (3) | C6—C5—C4 | 113.8 (3) |
H11—N1—H12 | 103 (4) | C6—C5—H5A | 108.8 |
N1—C1—C2 | 111.6 (3) | C4—C5—H5A | 108.8 |
N1—C1—H1A | 109.3 | C6—C5—H5B | 108.8 |
C2—C1—H1A | 109.3 | C4—C5—H5B | 108.8 |
N1—C1—H1B | 109.3 | H5A—C5—H5B | 107.7 |
C2—C1—H1B | 109.3 | C5—C6—C7 | 115.4 (3) |
H1A—C1—H1B | 108.0 | C5—C6—H6A | 108.4 |
C1—C2—C3 | 114.1 (3) | C7—C6—H6A | 108.4 |
C1—C2—H2A | 108.7 | C5—C6—H6B | 108.4 |
C3—C2—H2A | 108.7 | C7—C6—H6B | 108.4 |
C1—C2—H2B | 108.7 | H6A—C6—H6B | 107.5 |
C3—C2—H2B | 108.7 | N2—C7—C6 | 112.0 (3) |
H2A—C2—H2B | 107.6 | N2—C7—H7A | 109.2 |
C4—C3—C2 | 114.2 (3) | C6—C7—H7A | 109.2 |
C4—C3—H3A | 108.7 | N2—C7—H7B | 109.2 |
C2—C3—H3A | 108.7 | C6—C7—H7B | 109.2 |
C4—C3—H3B | 108.7 | H7A—C7—H7B | 107.9 |
C2—C3—H3B | 108.7 | C7—N2—H21 | 102 (3) |
H3A—C3—H3B | 107.6 | C7—N2—H22 | 111 (2) |
C3—C4—C5 | 113.7 (3) | H21—N2—H22 | 100 (3) |
C3—C4—H4A | 108.8 | C7—N2—H23 | 112.1 (19) |
C5—C4—H4A | 108.8 | H21—N2—H23 | 119 (3) |
C3—C4—H4B | 108.8 | H22—N2—H23 | 112 (3) |
C5—C4—H4B | 108.8 | ||
N1—C1—C2—C3 | −177.8 (3) | C3—C4—C5—C6 | −177.0 (3) |
C1—C2—C3—C4 | −178.7 (3) | C4—C5—C6—C7 | 177.6 (3) |
C2—C3—C4—C5 | 178.8 (3) | C5—C6—C7—N2 | −65.4 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H11···I1 | 0.88 (2) | 2.98 (4) | 3.738 (4) | 145 (5) |
N1—H12···I1i | 0.90 (2) | 2.88 (3) | 3.706 (3) | 153 (3) |
N2—H21···N1ii | 0.90 (2) | 1.87 (3) | 2.740 (4) | 164 (5) |
N2—H22···I1iii | 0.87 (2) | 2.72 (2) | 3.579 (3) | 170 (3) |
N2—H23···I1iv | 0.90 (2) | 2.83 (2) | 3.646 (3) | 152 (2) |
Symmetry codes: (i) x, y, z+1; (ii) −x+2, y+1/2, −z+1; (iii) −x+1, y+1/2, −z; (iv) −x+1, y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C7H19N2+·I− |
Mr | 258.14 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 290 |
a, b, c (Å) | 5.53418 (8), 18.7308 (3), 5.51570 (8) |
β (°) | 95.2195 (14) |
V (Å3) | 569.39 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 2.76 |
Crystal size (mm) | 0.77 × 0.41 × 0.24 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Eos |
Absorption correction | Analytical [CrysAlis PRO (Oxford Diffraction, 2009); analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)] |
Tmin, Tmax | 0.227, 0.543 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31566, 2331, 2325 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.017, 0.039, 1.03 |
No. of reflections | 2331 |
No. of parameters | 112 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.48 |
Absolute structure | Flack (1983), 1130 Friedel pairs |
Absolute structure parameter | −0.02 (2) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2010), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H11···I1 | 0.877 (19) | 2.98 (4) | 3.738 (4) | 145 (5) |
N1—H12···I1i | 0.898 (19) | 2.88 (3) | 3.706 (3) | 153 (3) |
N2—H21···N1ii | 0.90 (2) | 1.87 (3) | 2.740 (4) | 164 (5) |
N2—H22···I1iii | 0.871 (18) | 2.72 (2) | 3.579 (3) | 170 (3) |
N2—H23···I1iv | 0.901 (18) | 2.83 (2) | 3.646 (3) | 152 (2) |
Symmetry codes: (i) x, y, z+1; (ii) −x+2, y+1/2, −z+1; (iii) −x+1, y+1/2, −z; (iv) −x+1, y+1/2, −z+1. |
Acknowledgements
I thank E. Hammes and S. Joergens for technical support.
References
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There is general interest in diazanium iodides because it is well documented that they have a significant influence on the I3-/I- redox system in binary ionic liquids, which are used as electrolytes for dye-sensitized solar cells (Yang et al., 2011; Gorlov & Kloo, 2008; Grätzel, 2004). Most structures reported in the α,ω-diaminoalkane/HX system are composed of α,ω-diazaniumylalkane dications and complex counteranions. Salts of α,ω-diazaniumylalkanes represent an interesting class of organic-inorganic hybride materials, with a number of different structure design examples: hydrogen-bonded frameworks as host systems for unusual species (Frank & Graf); layered materials (Takeoka et al., 2005), large-pore zeolites (Jiang et al., 2010); non-metal frameworks (e.g. Vizi et al., 2006) and metal-frameworks (Seidlhofer et al., 2010).
Our longstanding interest in the structural chemistry of α,ω-diazaniumylalkanes is focused on their versatility as templates for the synthesis of new polyiodides (Reiss & Engel, 2002; Reiss & Engel, 2004; Reiss, 2010). However, only a limited number of high-quality crystal structure determinations on α-azaniumyl-ω-aminoalkane salts have been described (Luciawati et al., 2011; Pienack et al., 2007). Furthermore, the positions of the hydrogen atoms of the hydrogen bond donating groups are not well resolved in all cases (Natarajan et al., 1996, Qian et al., 2007).
This contribution presents a rare example of a crystal structure of an α-azaniumyl-ω-aminoalkane without any disorder. The asymmetric unit of the title compound consists of one 7-aminoheptylazanium cation and one iodide anion. The bond lengths and angles within the organic cation are, with C—C bond lengths between 1.497 (5) Å to 1.517 (4) Å and slightly shorter C—N distances, 1.462 (4) Å and 1.481 (4) Å, as expected. The azanium group, to fulfill the needs of hydrogen bonding, is twisted out of the plane defined by the carbon atoms of the all-trans conformation aliphatic chain, the C5—C6—C7—N2 torsion angle being -65.4 (4)° (Fig.1 and Fig. 3)
Cations are connected to symmetry-related units by head-to-tail R'H2N+—H···NH2R hydrogen bonds. As a result of this primary connection, one-dimensional zigzag chains along [010] are formed (Fig. 1). According to a generally accepted classification (Steiner, 2002), these N+—H···N hydrogen bonds can be described as medium strong. Both hydrogen atoms of the amino group and two of the three hydrogen atoms of the azaniumyl group form hydrogen bonds with neighbouring iodide anions. These weak N—H···I hydrogen bonds (Table 1) connect the above-mentioned chains into a three-dimensional framework (Fig. 2 and 3). This framework can be classified by graph sets (Etter et al. 1990) as built of two smaller ring motifs [R24(8) and R46(12); (Fig. 2)] in the hydrophilic region of the structure and a ring motif R24(24) that includes the alkyl chains (Fig. 3).