metal-organic compounds
Poly[[(2,2′-bipyridine)(μ3-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylato)cadmium] monohydrate]
aCollege of Chemistry and Life Science, Zhejiang Normal University, Jinhua 321004, Zhejiang, People's Republic of China, and bZhejiang Key Laboratory for Reactive Chemistry on Solid Surfaces, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua, Zhejiang 321004, People's Republic of China
*Correspondence e-mail: sky51@zjnu.cn
The title compound, {[Cd(C8H8O5)(C10H8N2)]·H2O}n, was obtained by the reaction of cadmium acetate with 2,2′-bipyridine and 7-oxabicyclo(2.2.1)heptane-2,3-dicarboxylic anhydride. The CdII atom is seven-coordinated in a distorted pentagonal–bipyramidal configuration, defined by five O atoms from the carboxylate groups of three 7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylato ligands and two N atoms from the 2,2′-bipyridine ligand. Two O atoms link two CdII atoms, forming a dinuclear center: the Cd—O—Cd bridging angle is 110.19 (6)°. The polymeric structure extends along [100] and is linked by intermolecular O—H⋯O hydrogen bonds involving the solvent water molecule. Extensive π–π stacking exists between 2,2-bypiridine ligands along [010] with centroid-centroid distance of 3.650 (2) Å
Related literature
For background to the applications of norcantharidin [systematic name: 7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic anhydride], see: Wang et al. (1989). F or related structures, see: Yin et al. (2003); Wang et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536811036634/zb2016sup1.cif
contains datablock global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811036634/zb2016Isup2.hkl
A mixture of 0.5 mmol norcantharidin, 0.5 mmol 2,2'-bipyridine,0.5 mmol cadmium acetate and 10 mL distilled water was sealed in a 25 mL Teflon-lined stainless vessel and heated at 433 K for 3 d, then cooled slowly to room temperature. The solution was filtered and block shaped colorless transparent crystals were obtained.
The structure was solved by
and successive Fourier difference synthesis. The H atoms bonded to C atoms were positioned geometrically and refined using a riding model [aromatic C—H = 0.93 Å, aliphatic of tertiary carbon C—H = 0.98 Å, aliphatic of secondary carbon C—H = 0.97 Å, Uiso(H) = 1.2Ueq(C)]. The H atoms bonded to O atoms were located in a difference Fourier maps and refined with O—H distance restraints of 0.85 (2) Å and Uiso(H) = 1.5Ueq(O).7-oxabicyclo(2,2,1)heptane-2,3-dicarboxylic anhydride (norcantharidin) is a variety of pharmacologically important compound such as protein kinase inhibitors and antitumor properties (Wang, 1989). Demethylcantharate is the acid radical of norcantharidin. A copper complex of 2,2'-bipyridine and demethylcantharate was reported (Yin et al., 2003); and a similar cadmium complex of demethylcantharate (Wang et al., 2009) has been reported.
Cadmium acetate can react with 2,2'-bipyridine and norcantharidin to form the title compound. X-ray crystallography measurement confirmed the molecular structure and the atom connectivity for the title compound (Fig. 1). The cadmium atom is seven-coordinated in a distorted pentagonal bipyramidal configuration, defined by five oxygen atoms (O1,O2,O1A,O3B,O4B) from carboxylate groups of three demethylcantharates and two nitrogen atoms (N1,N2) from 2,2'-bipyridine. O1 and O1A link two cadmium atoms(Cd1,Cd1A) to form a dinuclear center, and the The angle of the bridging O1(Cd1—O1—Cd1A)), is 110.19 (6)°.Each demethylcantharate acts as a four-coordinated bridging linker that connects two cadmium centers.
It showed that the polymeric molecules grow in [100] direction,and are linked by H-bonds(O1W—H1WA···O3; O1W—H1WA···O1W) to form a plane. Extensive pi-stacking is observed between 2,2-bypiridine ligands propagated along [010], linking the planes with the distance between planes of 3.4738 Å.
For background to the applications of norcantharidin [systematic name: 7-oxabicyclo(2.2.1)heptane-2,3-dicarboxylic anhydride], see: Wang et al. (1989). F or related structures, see: Yin et al. (2003); Wang et al. (2009).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the molecule of (I) showing the atom-labelling scheme with displacement ellipsoids drawn at the 30% probability, hydrogen atoms and water molecules were omitted. |
[Cd(C8H8O5)(C10H8N2)]·H2O | Z = 2 |
Mr = 470.75 | F(000) = 472 |
Triclinic, P1 | Dx = 1.801 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.2599 (1) Å | Cell parameters from 7860 reflections |
b = 10.5950 (2) Å | θ = 2.0–27.6° |
c = 11.1097 (2) Å | µ = 1.30 mm−1 |
α = 111.784 (1)° | T = 296 K |
β = 94.066 (1)° | Block, colourless |
γ = 102.749 (1)° | 0.33 × 0.14 × 0.07 mm |
V = 867.94 (2) Å3 |
Bruker SMART APEXII CCD diffractometer | 3972 independent reflections |
Radiation source: fine-focus sealed tube | 3699 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ω scans | θmax = 27.6°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→10 |
Tmin = 0.803, Tmax = 0.918 | k = −13→13 |
13190 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.022 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.95 | w = 1/[σ2(Fo2) + (0.0358P)2 + 0.509P] where P = (Fo2 + 2Fc2)/3 |
3972 reflections | (Δ/σ)max < 0.001 |
250 parameters | Δρmax = 0.34 e Å−3 |
3 restraints | Δρmin = −0.56 e Å−3 |
[Cd(C8H8O5)(C10H8N2)]·H2O | γ = 102.749 (1)° |
Mr = 470.75 | V = 867.94 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.2599 (1) Å | Mo Kα radiation |
b = 10.5950 (2) Å | µ = 1.30 mm−1 |
c = 11.1097 (2) Å | T = 296 K |
α = 111.784 (1)° | 0.33 × 0.14 × 0.07 mm |
β = 94.066 (1)° |
Bruker SMART APEXII CCD diffractometer | 3972 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3699 reflections with I > 2σ(I) |
Tmin = 0.803, Tmax = 0.918 | Rint = 0.021 |
13190 measured reflections |
R[F2 > 2σ(F2)] = 0.022 | 3 restraints |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.95 | Δρmax = 0.34 e Å−3 |
3972 reflections | Δρmin = −0.56 e Å−3 |
250 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.622884 (17) | 0.135016 (14) | 0.438680 (14) | 0.02838 (6) | |
N1 | 0.7226 (2) | 0.34613 (18) | 0.41261 (17) | 0.0312 (4) | |
N2 | 0.5919 (2) | 0.32243 (19) | 0.62096 (18) | 0.0329 (4) | |
O1W | 0.4578 (5) | 0.1298 (4) | 0.0551 (3) | 0.1174 (12) | |
H1WA | 0.411 (7) | 0.057 (5) | −0.024 (3) | 0.176* | |
H1WB | 0.400 (8) | 0.088 (6) | 0.104 (5) | 0.176* | |
O1 | 0.37311 (19) | −0.02140 (17) | 0.40538 (16) | 0.0371 (3) | |
O2 | 0.3303 (2) | 0.11060 (18) | 0.30183 (19) | 0.0449 (4) | |
O3 | −0.3040 (2) | −0.0038 (2) | 0.22846 (18) | 0.0500 (5) | |
O4 | −0.1199 (2) | 0.09023 (19) | 0.40964 (15) | 0.0432 (4) | |
O5 | −0.0940 (2) | −0.27932 (18) | 0.14335 (18) | 0.0474 (4) | |
C1 | 0.2765 (2) | 0.0124 (2) | 0.33481 (19) | 0.0274 (4) | |
C2 | 0.0974 (2) | −0.0774 (2) | 0.29330 (19) | 0.0267 (4) | |
H2A | 0.0520 | −0.0788 | 0.3721 | 0.032* | |
C3 | 0.0822 (3) | −0.2314 (2) | 0.1986 (2) | 0.0361 (5) | |
H3A | 0.1177 | −0.2882 | 0.2426 | 0.043* | |
C4 | 0.1675 (3) | −0.2356 (3) | 0.0796 (2) | 0.0452 (6) | |
H4A | 0.1784 | −0.3293 | 0.0290 | 0.054* | |
H4B | 0.2776 | −0.1685 | 0.1058 | 0.054* | |
C5 | 0.0417 (4) | −0.1935 (4) | 0.0024 (3) | 0.0565 (7) | |
H5A | 0.0937 | −0.1068 | −0.0067 | 0.068* | |
H5B | −0.0049 | −0.2675 | −0.0841 | 0.068* | |
C6 | −0.0928 (3) | −0.1738 (3) | 0.0910 (2) | 0.0439 (6) | |
H6A | −0.2029 | −0.1827 | 0.0448 | 0.053* | |
C7 | −0.0255 (3) | −0.0357 (2) | 0.21353 (19) | 0.0296 (4) | |
H7A | 0.0382 | 0.0371 | 0.1878 | 0.036* | |
C8 | −0.1600 (3) | 0.0185 (2) | 0.2884 (2) | 0.0305 (4) | |
C9 | 0.7903 (3) | 0.3532 (3) | 0.3088 (2) | 0.0402 (5) | |
H9A | 0.7896 | 0.2695 | 0.2400 | 0.048* | |
C10 | 0.8609 (3) | 0.4784 (3) | 0.2992 (3) | 0.0465 (6) | |
H10A | 0.9063 | 0.4794 | 0.2252 | 0.056* | |
C11 | 0.8631 (4) | 0.6025 (3) | 0.4012 (3) | 0.0477 (6) | |
H11A | 0.9115 | 0.6889 | 0.3979 | 0.057* | |
C12 | 0.7923 (3) | 0.5967 (2) | 0.5088 (2) | 0.0407 (5) | |
H12A | 0.7914 | 0.6793 | 0.5784 | 0.049* | |
C13 | 0.7229 (3) | 0.4670 (2) | 0.5117 (2) | 0.0295 (4) | |
C14 | 0.6425 (3) | 0.4529 (2) | 0.6236 (2) | 0.0295 (4) | |
C15 | 0.6177 (3) | 0.5688 (2) | 0.7256 (2) | 0.0393 (5) | |
H15A | 0.6548 | 0.6591 | 0.7273 | 0.047* | |
C16 | 0.5372 (4) | 0.5476 (3) | 0.8235 (2) | 0.0476 (6) | |
H16A | 0.5199 | 0.6237 | 0.8924 | 0.057* | |
C17 | 0.4825 (3) | 0.4128 (3) | 0.8190 (2) | 0.0463 (6) | |
H17A | 0.4261 | 0.3964 | 0.8835 | 0.056* | |
C18 | 0.5134 (3) | 0.3037 (3) | 0.7171 (2) | 0.0410 (5) | |
H18A | 0.4784 | 0.2129 | 0.7145 | 0.049* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.02580 (9) | 0.02276 (9) | 0.03633 (9) | 0.00709 (6) | 0.00848 (6) | 0.01055 (6) |
N1 | 0.0303 (9) | 0.0274 (9) | 0.0358 (9) | 0.0080 (7) | 0.0086 (7) | 0.0118 (7) |
N2 | 0.0360 (10) | 0.0287 (9) | 0.0367 (9) | 0.0109 (7) | 0.0097 (8) | 0.0139 (7) |
O1W | 0.152 (3) | 0.093 (2) | 0.087 (2) | 0.012 (2) | −0.004 (2) | 0.0295 (18) |
O1 | 0.0269 (8) | 0.0421 (9) | 0.0458 (9) | 0.0071 (6) | 0.0014 (6) | 0.0233 (7) |
O2 | 0.0348 (9) | 0.0379 (9) | 0.0687 (11) | 0.0044 (7) | 0.0074 (8) | 0.0317 (8) |
O3 | 0.0282 (8) | 0.0570 (11) | 0.0526 (10) | 0.0190 (8) | 0.0038 (7) | 0.0047 (8) |
O4 | 0.0451 (10) | 0.0547 (10) | 0.0328 (8) | 0.0276 (8) | 0.0114 (7) | 0.0118 (7) |
O5 | 0.0317 (9) | 0.0380 (9) | 0.0558 (10) | 0.0016 (7) | 0.0018 (7) | 0.0058 (8) |
C1 | 0.0246 (9) | 0.0265 (10) | 0.0305 (9) | 0.0095 (7) | 0.0078 (8) | 0.0086 (8) |
C2 | 0.0238 (9) | 0.0296 (10) | 0.0299 (9) | 0.0072 (8) | 0.0074 (7) | 0.0147 (8) |
C3 | 0.0306 (11) | 0.0291 (11) | 0.0454 (12) | 0.0065 (8) | 0.0051 (9) | 0.0122 (9) |
C4 | 0.0414 (13) | 0.0494 (14) | 0.0414 (12) | 0.0219 (11) | 0.0124 (10) | 0.0078 (11) |
C5 | 0.0595 (17) | 0.078 (2) | 0.0342 (12) | 0.0364 (15) | 0.0134 (12) | 0.0131 (13) |
C6 | 0.0334 (12) | 0.0545 (15) | 0.0339 (11) | 0.0177 (11) | −0.0002 (9) | 0.0042 (10) |
C7 | 0.0254 (10) | 0.0361 (11) | 0.0298 (9) | 0.0104 (8) | 0.0068 (8) | 0.0144 (8) |
C8 | 0.0291 (10) | 0.0288 (10) | 0.0385 (11) | 0.0101 (8) | 0.0113 (8) | 0.0163 (9) |
C9 | 0.0457 (13) | 0.0340 (12) | 0.0401 (12) | 0.0102 (10) | 0.0141 (10) | 0.0130 (10) |
C10 | 0.0549 (15) | 0.0436 (14) | 0.0423 (13) | 0.0054 (11) | 0.0162 (11) | 0.0212 (11) |
C11 | 0.0589 (16) | 0.0339 (13) | 0.0485 (14) | −0.0002 (11) | 0.0099 (12) | 0.0214 (11) |
C12 | 0.0507 (14) | 0.0261 (11) | 0.0401 (12) | 0.0038 (10) | 0.0052 (10) | 0.0115 (9) |
C13 | 0.0264 (10) | 0.0273 (10) | 0.0334 (10) | 0.0066 (8) | 0.0009 (8) | 0.0117 (8) |
C14 | 0.0283 (10) | 0.0273 (10) | 0.0324 (10) | 0.0087 (8) | 0.0017 (8) | 0.0110 (8) |
C15 | 0.0475 (13) | 0.0276 (11) | 0.0396 (12) | 0.0107 (9) | 0.0082 (10) | 0.0091 (9) |
C16 | 0.0561 (16) | 0.0411 (14) | 0.0384 (12) | 0.0153 (11) | 0.0118 (11) | 0.0058 (10) |
C17 | 0.0537 (15) | 0.0497 (15) | 0.0385 (12) | 0.0149 (12) | 0.0174 (11) | 0.0186 (11) |
C18 | 0.0489 (14) | 0.0344 (12) | 0.0436 (12) | 0.0112 (10) | 0.0156 (11) | 0.0183 (10) |
Cd1—O1 | 2.2511 (15) | C3—H3A | 0.9800 |
Cd1—O4i | 2.2963 (16) | C4—C5 | 1.541 (4) |
Cd1—N2 | 2.3285 (18) | C4—H4A | 0.9700 |
Cd1—N1 | 2.3382 (17) | C4—H4B | 0.9700 |
Cd1—O1ii | 2.4513 (15) | C5—C6 | 1.534 (3) |
Cd1—O3i | 2.4546 (17) | C5—H5A | 0.9700 |
Cd1—O2 | 2.6704 (17) | C5—H5B | 0.9700 |
Cd1—C8i | 2.720 (2) | C6—C7 | 1.535 (3) |
Cd1—C1 | 2.826 (2) | C6—H6A | 0.9800 |
N1—C9 | 1.336 (3) | C7—C8 | 1.521 (3) |
N1—C13 | 1.343 (3) | C7—H7A | 0.9800 |
N2—C18 | 1.341 (3) | C8—Cd1iii | 2.720 (2) |
N2—C14 | 1.341 (3) | C9—C10 | 1.373 (3) |
O1W—H1WA | 0.915 (19) | C9—H9A | 0.9300 |
O1W—H1WB | 0.922 (19) | C10—C11 | 1.377 (4) |
O1—C1 | 1.275 (2) | C10—H10A | 0.9300 |
O1—Cd1ii | 2.4513 (15) | C11—C12 | 1.383 (3) |
O2—C1 | 1.232 (3) | C11—H11A | 0.9300 |
O3—C8 | 1.249 (3) | C12—C13 | 1.381 (3) |
O3—Cd1iii | 2.4546 (17) | C12—H12A | 0.9300 |
O4—C8 | 1.252 (3) | C13—C14 | 1.490 (3) |
O4—Cd1iii | 2.2963 (16) | C14—C15 | 1.395 (3) |
O5—C3 | 1.438 (3) | C15—C16 | 1.376 (4) |
O5—C6 | 1.438 (3) | C15—H15A | 0.9300 |
C1—C2 | 1.504 (3) | C16—C17 | 1.380 (4) |
C2—C7 | 1.540 (3) | C16—H16A | 0.9300 |
C2—C3 | 1.550 (3) | C17—C18 | 1.373 (3) |
C2—H2A | 0.9800 | C17—H17A | 0.9300 |
C3—C4 | 1.533 (3) | C18—H18A | 0.9300 |
O1—Cd1—O4i | 127.85 (6) | C7—C2—H2A | 108.5 |
O1—Cd1—N2 | 99.82 (6) | C3—C2—H2A | 108.5 |
O4i—Cd1—N2 | 121.75 (6) | O5—C3—C4 | 102.84 (19) |
O1—Cd1—N1 | 137.35 (6) | O5—C3—C2 | 101.22 (16) |
O4i—Cd1—N1 | 88.94 (6) | C4—C3—C2 | 110.98 (19) |
N2—Cd1—N1 | 70.49 (6) | O5—C3—H3A | 113.6 |
O1—Cd1—O1ii | 69.81 (6) | C4—C3—H3A | 113.6 |
O4i—Cd1—O1ii | 84.38 (6) | C2—C3—H3A | 113.6 |
N2—Cd1—O1ii | 83.14 (6) | C3—C4—C5 | 101.08 (19) |
N1—Cd1—O1ii | 143.93 (6) | C3—C4—H4A | 111.6 |
O1—Cd1—O3i | 93.72 (6) | C5—C4—H4A | 111.6 |
O4i—Cd1—O3i | 54.58 (6) | C3—C4—H4B | 111.6 |
N2—Cd1—O3i | 162.62 (7) | C5—C4—H4B | 111.6 |
N1—Cd1—O3i | 92.16 (7) | H4A—C4—H4B | 109.4 |
O1ii—Cd1—O3i | 111.97 (6) | C6—C5—C4 | 101.4 (2) |
O1—Cd1—O2 | 51.77 (5) | C6—C5—H5A | 111.5 |
O4i—Cd1—O2 | 141.20 (6) | C4—C5—H5A | 111.5 |
N2—Cd1—O2 | 92.73 (6) | C6—C5—H5B | 111.5 |
N1—Cd1—O2 | 86.47 (5) | C4—C5—H5B | 111.5 |
O1ii—Cd1—O2 | 119.82 (5) | H5A—C5—H5B | 109.3 |
O3i—Cd1—O2 | 87.10 (6) | O5—C6—C5 | 102.7 (2) |
O1—Cd1—C8i | 112.42 (6) | O5—C6—C7 | 102.64 (18) |
O4i—Cd1—C8i | 27.27 (6) | C5—C6—C7 | 109.6 (2) |
N2—Cd1—C8i | 146.41 (7) | O5—C6—H6A | 113.6 |
N1—Cd1—C8i | 90.67 (6) | C5—C6—H6A | 113.6 |
O1ii—Cd1—C8i | 98.88 (6) | C7—C6—H6A | 113.6 |
O3i—Cd1—C8i | 27.32 (6) | C8—C7—C6 | 114.70 (18) |
O2—Cd1—C8i | 114.24 (6) | C8—C7—C2 | 113.22 (16) |
O1—Cd1—C1 | 26.07 (5) | C6—C7—C2 | 101.20 (17) |
O4i—Cd1—C1 | 140.84 (6) | C8—C7—H7A | 109.1 |
N2—Cd1—C1 | 96.88 (6) | C6—C7—H7A | 109.1 |
N1—Cd1—C1 | 111.81 (6) | C2—C7—H7A | 109.1 |
O1ii—Cd1—C1 | 95.02 (5) | O3—C8—O4 | 121.56 (19) |
O3i—Cd1—C1 | 90.48 (6) | O3—C8—C7 | 120.25 (19) |
O2—Cd1—C1 | 25.70 (5) | O4—C8—C7 | 118.12 (18) |
C8i—Cd1—C1 | 116.18 (6) | O3—C8—Cd1iii | 64.41 (12) |
O1—Cd1—Cd1ii | 36.61 (4) | O4—C8—Cd1iii | 57.15 (11) |
O4i—Cd1—Cd1ii | 107.21 (5) | C7—C8—Cd1iii | 174.70 (15) |
N2—Cd1—Cd1ii | 91.35 (5) | N1—C9—C10 | 123.0 (2) |
N1—Cd1—Cd1ii | 160.51 (4) | N1—C9—H9A | 118.5 |
O1ii—Cd1—Cd1ii | 33.21 (4) | C10—C9—H9A | 118.5 |
O3i—Cd1—Cd1ii | 105.99 (5) | C9—C10—C11 | 118.7 (2) |
O2—Cd1—Cd1ii | 87.42 (3) | C9—C10—H10A | 120.7 |
C8i—Cd1—Cd1ii | 108.70 (4) | C11—C10—H10A | 120.7 |
C1—Cd1—Cd1ii | 62.06 (4) | C10—C11—C12 | 119.0 (2) |
C9—N1—C13 | 118.48 (19) | C10—C11—H11A | 120.5 |
C9—N1—Cd1 | 123.34 (14) | C12—C11—H11A | 120.5 |
C13—N1—Cd1 | 117.99 (14) | C13—C12—C11 | 119.3 (2) |
C18—N2—C14 | 119.07 (19) | C13—C12—H12A | 120.4 |
C18—N2—Cd1 | 122.58 (15) | C11—C12—H12A | 120.4 |
C14—N2—Cd1 | 118.11 (14) | N1—C13—C12 | 121.7 (2) |
H1WA—O1W—H1WB | 95 (2) | N1—C13—C14 | 116.21 (18) |
C1—O1—Cd1 | 103.02 (13) | C12—C13—C14 | 122.13 (19) |
C1—O1—Cd1ii | 143.44 (13) | N2—C14—C15 | 121.1 (2) |
Cd1—O1—Cd1ii | 110.19 (6) | N2—C14—C13 | 116.89 (18) |
C1—O2—Cd1 | 84.22 (12) | C15—C14—C13 | 121.98 (19) |
C8—O3—Cd1iii | 88.27 (13) | C16—C15—C14 | 119.0 (2) |
C8—O4—Cd1iii | 95.58 (13) | C16—C15—H15A | 120.5 |
C3—O5—C6 | 96.14 (17) | C14—C15—H15A | 120.5 |
O2—C1—O1 | 120.98 (19) | C15—C16—C17 | 119.7 (2) |
O2—C1—C2 | 123.43 (18) | C15—C16—H16A | 120.2 |
O1—C1—C2 | 115.57 (17) | C17—C16—H16A | 120.2 |
O2—C1—Cd1 | 70.08 (12) | C18—C17—C16 | 118.4 (2) |
O1—C1—Cd1 | 50.91 (10) | C18—C17—H17A | 120.8 |
C2—C1—Cd1 | 166.44 (14) | C16—C17—H17A | 120.8 |
C1—C2—C7 | 117.17 (16) | N2—C18—C17 | 122.8 (2) |
C1—C2—C3 | 112.65 (16) | N2—C18—H18A | 118.6 |
C7—C2—C3 | 101.19 (16) | C17—C18—H18A | 118.6 |
C1—C2—H2A | 108.5 | ||
O1—Cd1—N1—C9 | −98.43 (19) | N1—Cd1—C1—O1 | −170.00 (12) |
O4i—Cd1—N1—C9 | 53.92 (18) | O1ii—Cd1—C1—O1 | −14.62 (16) |
N2—Cd1—N1—C9 | 178.32 (19) | O3i—Cd1—C1—O1 | 97.48 (13) |
O1ii—Cd1—N1—C9 | 132.87 (17) | O2—Cd1—C1—O1 | 179.8 (2) |
O3i—Cd1—N1—C9 | −0.57 (18) | C8i—Cd1—C1—O1 | 87.84 (13) |
O2—Cd1—N1—C9 | −87.53 (18) | Cd1ii—Cd1—C1—O1 | −10.42 (11) |
C8i—Cd1—N1—C9 | 26.71 (18) | O1—Cd1—C1—C2 | −4.7 (5) |
C1—Cd1—N1—C9 | −91.96 (18) | O4i—Cd1—C1—C2 | 68.0 (6) |
Cd1ii—Cd1—N1—C9 | −159.50 (14) | N2—Cd1—C1—C2 | −103.0 (6) |
O1—Cd1—N1—C13 | 86.62 (17) | N1—Cd1—C1—C2 | −174.7 (5) |
O4i—Cd1—N1—C13 | −121.02 (15) | O1ii—Cd1—C1—C2 | −19.3 (6) |
N2—Cd1—N1—C13 | 3.37 (14) | O3i—Cd1—C1—C2 | 92.8 (6) |
O1ii—Cd1—N1—C13 | −42.07 (19) | O2—Cd1—C1—C2 | 175.1 (6) |
O3i—Cd1—N1—C13 | −175.52 (15) | C8i—Cd1—C1—C2 | 83.2 (6) |
O2—Cd1—N1—C13 | 97.52 (15) | Cd1ii—Cd1—C1—C2 | −15.1 (5) |
C8i—Cd1—N1—C13 | −148.23 (15) | O2—C1—C2—C7 | −4.4 (3) |
C1—Cd1—N1—C13 | 93.09 (15) | O1—C1—C2—C7 | 177.14 (17) |
Cd1ii—Cd1—N1—C13 | 25.6 (2) | Cd1—C1—C2—C7 | −178.8 (5) |
O1—Cd1—N2—C18 | 37.44 (19) | O2—C1—C2—C3 | 112.4 (2) |
O4i—Cd1—N2—C18 | −109.65 (19) | O1—C1—C2—C3 | −66.1 (2) |
N1—Cd1—N2—C18 | 174.4 (2) | Cd1—C1—C2—C3 | −62.1 (6) |
O1ii—Cd1—N2—C18 | −30.63 (18) | C6—O5—C3—C4 | −56.7 (2) |
O3i—Cd1—N2—C18 | 178.09 (18) | C6—O5—C3—C2 | 58.15 (19) |
O2—Cd1—N2—C18 | 89.09 (18) | C1—C2—C3—O5 | −162.72 (17) |
C8i—Cd1—N2—C18 | −126.37 (18) | C7—C2—C3—O5 | −36.8 (2) |
C1—Cd1—N2—C18 | 63.63 (19) | C1—C2—C3—C4 | −54.1 (2) |
Cd1ii—Cd1—N2—C18 | 1.61 (18) | C7—C2—C3—C4 | 71.8 (2) |
O1—Cd1—N2—C14 | −136.90 (15) | O5—C3—C4—C5 | 34.9 (2) |
O4i—Cd1—N2—C14 | 76.02 (16) | C2—C3—C4—C5 | −72.7 (2) |
N1—Cd1—N2—C14 | 0.04 (14) | C3—C4—C5—C6 | −0.3 (3) |
O1ii—Cd1—N2—C14 | 155.04 (16) | C3—O5—C6—C5 | 56.3 (2) |
O3i—Cd1—N2—C14 | 3.8 (3) | C3—O5—C6—C7 | −57.48 (19) |
O2—Cd1—N2—C14 | −85.25 (15) | C4—C5—C6—O5 | −34.4 (3) |
C8i—Cd1—N2—C14 | 59.3 (2) | C4—C5—C6—C7 | 74.2 (3) |
C1—Cd1—N2—C14 | −110.71 (15) | O5—C6—C7—C8 | −88.6 (2) |
Cd1ii—Cd1—N2—C14 | −172.72 (15) | C5—C6—C7—C8 | 162.76 (19) |
O4i—Cd1—O1—C1 | −130.25 (12) | O5—C6—C7—C2 | 33.6 (2) |
N2—Cd1—O1—C1 | 85.57 (13) | C5—C6—C7—C2 | −75.0 (2) |
N1—Cd1—O1—C1 | 13.77 (17) | C1—C2—C7—C8 | −111.9 (2) |
O1ii—Cd1—O1—C1 | 164.46 (17) | C3—C2—C7—C8 | 125.18 (18) |
O3i—Cd1—O1—C1 | −83.48 (13) | C1—C2—C7—C6 | 124.80 (19) |
O2—Cd1—O1—C1 | −0.13 (11) | C3—C2—C7—C6 | 1.9 (2) |
C8i—Cd1—O1—C1 | −104.04 (13) | Cd1iii—O3—C8—O4 | −0.2 (2) |
Cd1ii—Cd1—O1—C1 | 164.46 (17) | Cd1iii—O3—C8—C7 | −177.16 (17) |
O4i—Cd1—O1—Cd1ii | 65.30 (9) | Cd1iii—O4—C8—O3 | 0.2 (2) |
N2—Cd1—O1—Cd1ii | −78.88 (7) | Cd1iii—O4—C8—C7 | 177.23 (16) |
N1—Cd1—O1—Cd1ii | −150.68 (7) | C6—C7—C8—O3 | −31.7 (3) |
O1ii—Cd1—O1—Cd1ii | 0.0 | C2—C7—C8—O3 | −147.1 (2) |
O3i—Cd1—O1—Cd1ii | 112.06 (7) | C6—C7—C8—O4 | 151.3 (2) |
O2—Cd1—O1—Cd1ii | −164.59 (10) | C2—C7—C8—O4 | 35.8 (3) |
C8i—Cd1—O1—Cd1ii | 91.51 (8) | C13—N1—C9—C10 | 0.4 (4) |
C1—Cd1—O1—Cd1ii | −164.46 (17) | Cd1—N1—C9—C10 | −174.6 (2) |
O1—Cd1—O2—C1 | 0.13 (12) | N1—C9—C10—C11 | 0.4 (4) |
O4i—Cd1—O2—C1 | 105.62 (14) | C9—C10—C11—C12 | −0.9 (4) |
N2—Cd1—O2—C1 | −100.23 (13) | C10—C11—C12—C13 | 0.7 (4) |
N1—Cd1—O2—C1 | −170.48 (13) | C9—N1—C13—C12 | −0.6 (3) |
O1ii—Cd1—O2—C1 | −16.58 (15) | Cd1—N1—C13—C12 | 174.62 (17) |
O3i—Cd1—O2—C1 | 97.17 (13) | C9—N1—C13—C14 | 178.72 (19) |
C8i—Cd1—O2—C1 | 100.38 (13) | Cd1—N1—C13—C14 | −6.1 (2) |
Cd1ii—Cd1—O2—C1 | −9.00 (12) | C11—C12—C13—N1 | 0.1 (4) |
Cd1—O2—C1—O1 | −0.22 (19) | C11—C12—C13—C14 | −179.2 (2) |
Cd1—O2—C1—C2 | −178.62 (18) | C18—N2—C14—C15 | 1.2 (3) |
Cd1—O1—C1—O2 | 0.3 (2) | Cd1—N2—C14—C15 | 175.77 (16) |
Cd1ii—O1—C1—O2 | 155.28 (18) | C18—N2—C14—C13 | −177.6 (2) |
Cd1—O1—C1—C2 | 178.79 (13) | Cd1—N2—C14—C13 | −3.1 (2) |
Cd1ii—O1—C1—C2 | −26.2 (3) | N1—C13—C14—N2 | 6.1 (3) |
Cd1ii—O1—C1—Cd1 | 155.0 (3) | C12—C13—C14—N2 | −174.6 (2) |
O1—Cd1—C1—O2 | −179.8 (2) | N1—C13—C14—C15 | −172.8 (2) |
O4i—Cd1—C1—O2 | −107.13 (14) | C12—C13—C14—C15 | 6.5 (3) |
N2—Cd1—C1—O2 | 81.94 (13) | N2—C14—C15—C16 | −1.1 (3) |
N1—Cd1—C1—O2 | 10.24 (14) | C13—C14—C15—C16 | 177.7 (2) |
O1ii—Cd1—C1—O2 | 165.61 (13) | C14—C15—C16—C17 | −0.2 (4) |
O3i—Cd1—C1—O2 | −82.28 (13) | C15—C16—C17—C18 | 1.2 (4) |
C8i—Cd1—C1—O2 | −91.92 (13) | C14—N2—C18—C17 | −0.1 (4) |
Cd1ii—Cd1—C1—O2 | 169.82 (14) | Cd1—N2—C18—C17 | −174.43 (19) |
O4i—Cd1—C1—O1 | 72.63 (16) | C16—C17—C18—N2 | −1.1 (4) |
N2—Cd1—C1—O1 | −98.30 (13) |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y, −z+1; (iii) x−1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3iv | 0.92 (2) | 2.19 (4) | 2.980 (4) | 144 (5) |
O1W—H1WA···O1Wv | 0.92 (2) | 2.38 (6) | 2.833 (8) | 110 (5) |
Symmetry codes: (iv) −x, −y, −z; (v) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C8H8O5)(C10H8N2)]·H2O |
Mr | 470.75 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 8.2599 (1), 10.5950 (2), 11.1097 (2) |
α, β, γ (°) | 111.784 (1), 94.066 (1), 102.749 (1) |
V (Å3) | 867.94 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.30 |
Crystal size (mm) | 0.33 × 0.14 × 0.07 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.803, 0.918 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13190, 3972, 3699 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.022, 0.059, 0.95 |
No. of reflections | 3972 |
No. of parameters | 250 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.34, −0.56 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3i | 0.915 (19) | 2.19 (4) | 2.980 (4) | 144 (5) |
O1W—H1WA···O1Wii | 0.915 (19) | 2.38 (6) | 2.833 (8) | 110 (5) |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z. |
Acknowledgements
The authors are grateful for financial support from the undergraduate innovative project of Zhejiang Province, China.
References
Bruker (2001). SAINT. Bruker AXS Inc., Madison,Wisconsin, USA. Google Scholar
Bruker (2004). APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
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7-oxabicyclo(2,2,1)heptane-2,3-dicarboxylic anhydride (norcantharidin) is a variety of pharmacologically important compound such as protein kinase inhibitors and antitumor properties (Wang, 1989). Demethylcantharate is the acid radical of norcantharidin. A copper complex of 2,2'-bipyridine and demethylcantharate was reported (Yin et al., 2003); and a similar cadmium complex of demethylcantharate (Wang et al., 2009) has been reported.
Cadmium acetate can react with 2,2'-bipyridine and norcantharidin to form the title compound. X-ray crystallography measurement confirmed the molecular structure and the atom connectivity for the title compound (Fig. 1). The cadmium atom is seven-coordinated in a distorted pentagonal bipyramidal configuration, defined by five oxygen atoms (O1,O2,O1A,O3B,O4B) from carboxylate groups of three demethylcantharates and two nitrogen atoms (N1,N2) from 2,2'-bipyridine. O1 and O1A link two cadmium atoms(Cd1,Cd1A) to form a dinuclear center, and the The angle of the bridging O1(Cd1—O1—Cd1A)), is 110.19 (6)°.Each demethylcantharate acts as a four-coordinated bridging linker that connects two cadmium centers.
It showed that the polymeric molecules grow in [100] direction,and are linked by H-bonds(O1W—H1WA···O3; O1W—H1WA···O1W) to form a plane. Extensive pi-stacking is observed between 2,2-bypiridine ligands propagated along [010], linking the planes with the distance between planes of 3.4738 Å.