organic compounds
6-Bromoimidazo[1,2-a]pyridin-8-amine
aLaboratoire de Chimie Organique Appliquée, Faculté des Sciences et Techniques, Université Sidi Mohamed Ben Abdallah, Fés, Morocco, bUnité de Catalyse et de Chimie du Solide, Ecole Nationale Supérieure de Chimie de Lille, Lille, France, cLaboratoire de Chimie Organique Hétérocyclique, Pôle de Compétences Pharmacochimie, Université Mohammed V-Agdal, BP 1014 Avenue Ibn Batout, Rabat, Morocco, dDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia, and eChemistry Department, King Abdulaziz University, PO Box 80203 Jeddah, Saudi Arabia
*Correspondence e-mail: seikweng@um.edu.my
The title compound, C7H6BrN3, crystallizes with three independent molecules in the The molecules are approximately planar (r.m.s. deviations for all non-H atoms = 0.016, 0.023 and 0.024 Å). The primary amine groups show pyramidal coordination. In the crystal, adjacent molecules are linked by N—H⋯N hydrogen bonds. For two independent molecules, the amine groups are hydrogen-bond donors via one H atom to one acceptor atom, whereas for the third independent molecule, the amine group is a hydrogen-bond donor to two acceptor atoms.
Related literature
For background information on 8-amino-6-bromo-imidazo[1,2-a]pyridine, see: Dwyer et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811040177/bt5659sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811040177/bt5659Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811040177/bt5659Isup3.cml
A mixture of chloroacetaldehyde (0.68 ml, 10.6 mmol), 5-bromo-2,3-diaminopyridine (1 g, 5.32 mmol) and sodium bicarbonate (0.44 g, 5.32 mmol) in ethanol (10 ml) was heated. The reaction was monitored by TLC. On completion of the reaction, the solution was extracted with dichloromethane and the organic layer was dried over anhydrous sodium sulfate. Evaporation of the solvent followed by recrystallization from hexane gave yellow crystals of the title compound.
Carbon-bound H-atoms were placed in calculated positions (C– 0.95 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2U(C).The amino H-atoms were located in a difference Fourier map, and were refined isotropically with a distance restraint of N–H 0.88±0.01 Å.
The final difference Fourier map had a peak in the vicinity of Br1 and a hole in the vicinity of Br2.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Anisotropic displacement ellipsoid plot (Barbour, 2001) of the three independent molecules at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C7H6BrN3 | F(000) = 1248 |
Mr = 212.06 | Dx = 1.890 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9878 reflections |
a = 15.1378 (5) Å | θ = 2.4–28.2° |
b = 21.2006 (8) Å | µ = 5.44 mm−1 |
c = 6.9744 (3) Å | T = 100 K |
β = 92.6106 (7)° | Prism, yellow |
V = 2235.97 (15) Å3 | 0.13 × 0.04 × 0.02 mm |
Z = 12 |
Bruker APEX DUO diffractometer | 5538 independent reflections |
Radiation source: fine-focus sealed tube | 4675 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.048 |
ω scans | θmax = 28.3°, θmin = 1.7° |
Absorption correction: multi-scan SADABS (Sheldrick, 1996)' | h = −20→20 |
Tmin = 0.538, Tmax = 0.899 | k = −28→28 |
44729 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0398P)2 + 2.2806P] where P = (Fo2 + 2Fc2)/3 |
5538 reflections | (Δ/σ)max = 0.001 |
322 parameters | Δρmax = 1.15 e Å−3 |
6 restraints | Δρmin = −0.46 e Å−3 |
C7H6BrN3 | V = 2235.97 (15) Å3 |
Mr = 212.06 | Z = 12 |
Monoclinic, P21/c | Mo Kα radiation |
a = 15.1378 (5) Å | µ = 5.44 mm−1 |
b = 21.2006 (8) Å | T = 100 K |
c = 6.9744 (3) Å | 0.13 × 0.04 × 0.02 mm |
β = 92.6106 (7)° |
Bruker APEX DUO diffractometer | 5538 independent reflections |
Absorption correction: multi-scan SADABS (Sheldrick, 1996)' | 4675 reflections with I > 2σ(I) |
Tmin = 0.538, Tmax = 0.899 | Rint = 0.048 |
44729 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 6 restraints |
wR(F2) = 0.078 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 1.15 e Å−3 |
5538 reflections | Δρmin = −0.46 e Å−3 |
322 parameters |
x | y | z | Uiso*/Ueq | ||
Br1 | 1.107067 (18) | 0.309517 (13) | 0.81184 (4) | 0.02396 (8) | |
Br2 | 0.248212 (17) | 0.345125 (13) | 0.22269 (4) | 0.02332 (8) | |
Br3 | 0.930771 (17) | 0.485358 (12) | −0.30860 (4) | 0.01955 (7) | |
N1 | 0.93022 (14) | 0.35309 (10) | 0.3739 (3) | 0.0147 (4) | |
N2 | 0.78304 (15) | 0.35253 (10) | 0.3158 (3) | 0.0170 (4) | |
N3 | 0.76115 (15) | 0.29900 (11) | 0.6916 (3) | 0.0179 (4) | |
N4 | 0.46555 (13) | 0.23784 (10) | 0.3560 (3) | 0.0131 (4) | |
N5 | 0.61032 (14) | 0.25193 (10) | 0.4281 (3) | 0.0153 (4) | |
N6 | 0.58767 (15) | 0.38763 (10) | 0.3737 (3) | 0.0167 (4) | |
N7 | 0.75458 (14) | 0.52802 (10) | 0.0966 (3) | 0.0144 (4) | |
N8 | 0.60864 (14) | 0.52091 (10) | 0.1372 (3) | 0.0165 (4) | |
N9 | 0.58646 (14) | 0.46594 (10) | −0.2438 (3) | 0.0164 (4) | |
C1 | 1.00873 (17) | 0.34402 (11) | 0.4792 (4) | 0.0174 (5) | |
H1 | 1.0643 | 0.3540 | 0.4290 | 0.021* | |
C2 | 1.00202 (17) | 0.32018 (12) | 0.6573 (4) | 0.0168 (5) | |
C3 | 0.92127 (17) | 0.30293 (11) | 0.7364 (4) | 0.0167 (5) | |
H3 | 0.9207 | 0.2850 | 0.8612 | 0.020* | |
C4 | 0.84294 (17) | 0.31237 (11) | 0.6302 (4) | 0.0145 (5) | |
C5 | 0.84843 (16) | 0.33958 (11) | 0.4443 (4) | 0.0142 (5) | |
C6 | 0.82481 (18) | 0.37419 (12) | 0.1590 (4) | 0.0196 (5) | |
H6 | 0.7949 | 0.3870 | 0.0427 | 0.023* | |
C7 | 0.91483 (18) | 0.37524 (13) | 0.1893 (4) | 0.0194 (5) | |
H7 | 0.9575 | 0.3884 | 0.1020 | 0.023* | |
C8 | 0.37957 (17) | 0.25553 (12) | 0.3112 (4) | 0.0158 (5) | |
H8 | 0.3333 | 0.2254 | 0.2961 | 0.019* | |
C9 | 0.36455 (17) | 0.31802 (12) | 0.2898 (4) | 0.0162 (5) | |
C10 | 0.43202 (17) | 0.36433 (12) | 0.3074 (4) | 0.0157 (5) | |
H10 | 0.4183 | 0.4076 | 0.2870 | 0.019* | |
C11 | 0.51705 (17) | 0.34614 (11) | 0.3540 (3) | 0.0144 (5) | |
C12 | 0.53420 (16) | 0.28070 (11) | 0.3834 (3) | 0.0134 (5) | |
C13 | 0.58955 (18) | 0.18878 (12) | 0.4262 (4) | 0.0173 (5) | |
H13 | 0.6312 | 0.1560 | 0.4528 | 0.021* | |
C14 | 0.50220 (18) | 0.17886 (12) | 0.3818 (4) | 0.0171 (5) | |
H14 | 0.4726 | 0.1394 | 0.3708 | 0.021* | |
C15 | 0.83221 (16) | 0.52183 (11) | 0.0020 (4) | 0.0154 (5) | |
H15 | 0.8873 | 0.5358 | 0.0574 | 0.018* | |
C16 | 0.82568 (16) | 0.49497 (11) | −0.1733 (4) | 0.0152 (5) | |
C17 | 0.74557 (16) | 0.47370 (11) | −0.2611 (4) | 0.0142 (5) | |
H17 | 0.7450 | 0.4540 | −0.3835 | 0.017* | |
C18 | 0.66754 (16) | 0.48172 (11) | −0.1679 (4) | 0.0135 (5) | |
C19 | 0.67320 (16) | 0.50949 (11) | 0.0182 (4) | 0.0131 (5) | |
C20 | 0.65091 (18) | 0.54752 (13) | 0.2963 (4) | 0.0206 (5) | |
H20 | 0.6217 | 0.5610 | 0.4069 | 0.025* | |
C21 | 0.73987 (18) | 0.55214 (13) | 0.2758 (4) | 0.0183 (5) | |
H21 | 0.7827 | 0.5686 | 0.3662 | 0.022* | |
H31 | 0.7175 (18) | 0.2903 (18) | 0.608 (4) | 0.045 (11)* | |
H32 | 0.755 (3) | 0.2726 (15) | 0.787 (4) | 0.047 (12)* | |
H61 | 0.6413 (10) | 0.3726 (14) | 0.367 (4) | 0.021 (8)* | |
H62 | 0.581 (2) | 0.4227 (9) | 0.307 (4) | 0.019 (8)* | |
H91 | 0.5382 (13) | 0.4706 (14) | −0.181 (4) | 0.018 (8)* | |
H92 | 0.586 (2) | 0.4427 (14) | −0.348 (3) | 0.033 (10)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.01367 (13) | 0.02313 (14) | 0.03436 (16) | −0.00028 (10) | −0.00679 (11) | 0.00462 (11) |
Br2 | 0.01282 (13) | 0.02352 (14) | 0.03321 (16) | 0.00291 (10) | −0.00335 (10) | 0.00457 (11) |
Br3 | 0.01248 (12) | 0.02091 (13) | 0.02567 (14) | −0.00039 (9) | 0.00531 (9) | −0.00224 (10) |
N1 | 0.0135 (10) | 0.0149 (10) | 0.0158 (10) | −0.0029 (8) | 0.0020 (8) | −0.0011 (8) |
N2 | 0.0168 (10) | 0.0159 (10) | 0.0182 (11) | −0.0023 (8) | −0.0023 (8) | 0.0018 (8) |
N3 | 0.0138 (11) | 0.0231 (12) | 0.0167 (11) | −0.0022 (9) | 0.0012 (8) | 0.0053 (9) |
N4 | 0.0119 (10) | 0.0138 (10) | 0.0135 (10) | 0.0000 (8) | −0.0009 (8) | 0.0002 (8) |
N5 | 0.0155 (10) | 0.0162 (10) | 0.0142 (10) | 0.0002 (8) | −0.0006 (8) | 0.0010 (8) |
N6 | 0.0151 (11) | 0.0132 (10) | 0.0215 (11) | −0.0021 (8) | −0.0002 (9) | −0.0003 (8) |
N7 | 0.0110 (10) | 0.0150 (10) | 0.0171 (10) | −0.0012 (8) | −0.0015 (8) | −0.0009 (8) |
N8 | 0.0155 (10) | 0.0158 (10) | 0.0183 (11) | 0.0003 (8) | 0.0021 (8) | −0.0005 (8) |
N9 | 0.0117 (10) | 0.0190 (11) | 0.0184 (11) | −0.0017 (8) | −0.0014 (8) | −0.0056 (9) |
C1 | 0.0107 (11) | 0.0159 (12) | 0.0255 (14) | −0.0003 (9) | 0.0009 (10) | −0.0034 (10) |
C2 | 0.0121 (11) | 0.0141 (11) | 0.0240 (13) | 0.0007 (9) | −0.0028 (10) | −0.0009 (10) |
C3 | 0.0178 (13) | 0.0122 (11) | 0.0201 (13) | −0.0009 (9) | −0.0005 (10) | 0.0007 (9) |
C4 | 0.0140 (12) | 0.0105 (10) | 0.0190 (12) | −0.0007 (9) | 0.0018 (9) | −0.0007 (9) |
C5 | 0.0122 (11) | 0.0119 (11) | 0.0187 (12) | −0.0014 (9) | 0.0021 (9) | −0.0018 (9) |
C6 | 0.0210 (13) | 0.0185 (12) | 0.0188 (13) | −0.0054 (10) | −0.0037 (10) | 0.0033 (10) |
C7 | 0.0224 (13) | 0.0198 (12) | 0.0162 (12) | −0.0052 (10) | 0.0022 (10) | 0.0023 (10) |
C8 | 0.0140 (12) | 0.0176 (12) | 0.0156 (12) | −0.0023 (9) | −0.0016 (9) | 0.0005 (9) |
C9 | 0.0123 (11) | 0.0184 (12) | 0.0177 (12) | 0.0028 (9) | −0.0007 (9) | 0.0000 (10) |
C10 | 0.0183 (12) | 0.0136 (11) | 0.0153 (12) | 0.0021 (9) | 0.0008 (9) | −0.0009 (9) |
C11 | 0.0166 (12) | 0.0153 (11) | 0.0113 (11) | 0.0000 (9) | −0.0001 (9) | −0.0019 (9) |
C12 | 0.0129 (11) | 0.0159 (11) | 0.0113 (11) | −0.0019 (9) | −0.0002 (9) | −0.0014 (9) |
C13 | 0.0195 (13) | 0.0156 (12) | 0.0169 (12) | 0.0023 (10) | 0.0018 (10) | 0.0028 (9) |
C14 | 0.0220 (13) | 0.0119 (11) | 0.0177 (12) | 0.0017 (10) | 0.0030 (10) | 0.0008 (9) |
C15 | 0.0104 (11) | 0.0152 (11) | 0.0204 (12) | −0.0015 (9) | −0.0002 (9) | 0.0014 (10) |
C16 | 0.0118 (11) | 0.0125 (11) | 0.0215 (13) | 0.0010 (9) | 0.0023 (9) | 0.0024 (9) |
C17 | 0.0141 (12) | 0.0136 (11) | 0.0149 (12) | 0.0002 (9) | −0.0001 (9) | 0.0003 (9) |
C18 | 0.0133 (11) | 0.0106 (10) | 0.0164 (12) | 0.0001 (9) | −0.0005 (9) | 0.0022 (9) |
C19 | 0.0113 (11) | 0.0112 (11) | 0.0168 (12) | 0.0001 (9) | 0.0009 (9) | 0.0021 (9) |
C20 | 0.0232 (14) | 0.0213 (13) | 0.0174 (13) | 0.0005 (11) | 0.0038 (10) | −0.0026 (10) |
C21 | 0.0204 (13) | 0.0207 (13) | 0.0138 (12) | −0.0024 (10) | −0.0012 (10) | −0.0024 (10) |
Br1—C2 | 1.893 (3) | C1—C2 | 1.350 (4) |
Br2—C9 | 1.891 (3) | C1—H1 | 0.9500 |
Br3—C16 | 1.897 (3) | C2—C3 | 1.412 (4) |
N1—C7 | 1.380 (3) | C3—C4 | 1.384 (4) |
N1—C1 | 1.382 (3) | C3—H3 | 0.9500 |
N1—C5 | 1.383 (3) | C4—C5 | 1.425 (3) |
N2—C5 | 1.333 (3) | C6—C7 | 1.370 (4) |
N2—C6 | 1.367 (3) | C6—H6 | 0.9500 |
N3—C4 | 1.358 (3) | C7—H7 | 0.9500 |
N3—H31 | 0.883 (10) | C8—C9 | 1.351 (4) |
N3—H32 | 0.880 (10) | C8—H8 | 0.9500 |
N4—C14 | 1.377 (3) | C9—C10 | 1.418 (4) |
N4—C8 | 1.377 (3) | C10—C11 | 1.369 (4) |
N4—C12 | 1.387 (3) | C10—H10 | 0.9500 |
N5—C12 | 1.328 (3) | C11—C12 | 1.425 (3) |
N5—C13 | 1.375 (3) | C13—C14 | 1.361 (4) |
N6—C11 | 1.386 (3) | C13—H13 | 0.9500 |
N6—H61 | 0.875 (10) | C14—H14 | 0.9500 |
N6—H62 | 0.881 (10) | C15—C16 | 1.348 (4) |
N7—C21 | 1.378 (3) | C15—H15 | 0.9500 |
N7—C15 | 1.380 (3) | C16—C17 | 1.408 (3) |
N7—C19 | 1.382 (3) | C17—C18 | 1.385 (3) |
N8—C19 | 1.333 (3) | C17—H17 | 0.9500 |
N8—C20 | 1.377 (3) | C18—C19 | 1.424 (3) |
N9—C18 | 1.356 (3) | C20—C21 | 1.364 (4) |
N9—H91 | 0.874 (10) | C20—H20 | 0.9500 |
N9—H92 | 0.876 (10) | C21—H21 | 0.9500 |
C7—N1—C1 | 130.4 (2) | C9—C8—N4 | 116.4 (2) |
C7—N1—C5 | 106.6 (2) | C9—C8—H8 | 121.8 |
C1—N1—C5 | 123.0 (2) | N4—C8—H8 | 121.8 |
C5—N2—C6 | 104.5 (2) | C8—C9—C10 | 123.5 (2) |
C4—N3—H31 | 120 (3) | C8—C9—Br2 | 118.4 (2) |
C4—N3—H32 | 121 (3) | C10—C9—Br2 | 118.03 (18) |
H31—N3—H32 | 105 (4) | C11—C10—C9 | 119.4 (2) |
C14—N4—C8 | 130.4 (2) | C11—C10—H10 | 120.3 |
C14—N4—C12 | 106.4 (2) | C9—C10—H10 | 120.3 |
C8—N4—C12 | 123.2 (2) | C10—C11—N6 | 123.9 (2) |
C12—N5—C13 | 104.4 (2) | C10—C11—C12 | 118.2 (2) |
C11—N6—H61 | 118 (2) | N6—C11—C12 | 118.0 (2) |
C11—N6—H62 | 114 (2) | N5—C12—N4 | 111.6 (2) |
H61—N6—H62 | 112 (3) | N5—C12—C11 | 129.2 (2) |
C21—N7—C15 | 130.2 (2) | N4—C12—C11 | 119.2 (2) |
C21—N7—C19 | 106.6 (2) | C14—C13—N5 | 111.8 (2) |
C15—N7—C19 | 123.2 (2) | C14—C13—H13 | 124.1 |
C19—N8—C20 | 104.4 (2) | N5—C13—H13 | 124.1 |
C18—N9—H91 | 123 (2) | C13—C14—N4 | 105.7 (2) |
C18—N9—H92 | 116 (2) | C13—C14—H14 | 127.1 |
H91—N9—H92 | 120 (3) | N4—C14—H14 | 127.1 |
C2—C1—N1 | 116.3 (2) | C16—C15—N7 | 116.4 (2) |
C2—C1—H1 | 121.9 | C16—C15—H15 | 121.8 |
N1—C1—H1 | 121.9 | N7—C15—H15 | 121.8 |
C1—C2—C3 | 124.0 (2) | C15—C16—C17 | 123.8 (2) |
C1—C2—Br1 | 118.2 (2) | C15—C16—Br3 | 117.90 (19) |
C3—C2—Br1 | 117.8 (2) | C17—C16—Br3 | 118.32 (19) |
C4—C3—C2 | 119.3 (2) | C18—C17—C16 | 119.5 (2) |
C4—C3—H3 | 120.3 | C18—C17—H17 | 120.2 |
C2—C3—H3 | 120.3 | C16—C17—H17 | 120.2 |
N3—C4—C3 | 124.9 (2) | N9—C18—C17 | 124.2 (2) |
N3—C4—C5 | 117.6 (2) | N9—C18—C19 | 118.3 (2) |
C3—C4—C5 | 117.5 (2) | C17—C18—C19 | 117.5 (2) |
N2—C5—N1 | 111.6 (2) | N8—C19—N7 | 111.6 (2) |
N2—C5—C4 | 128.5 (2) | N8—C19—C18 | 128.8 (2) |
N1—C5—C4 | 119.8 (2) | N7—C19—C18 | 119.6 (2) |
N2—C6—C7 | 112.0 (2) | C21—C20—N8 | 111.7 (2) |
N2—C6—H6 | 124.0 | C21—C20—H20 | 124.2 |
C7—C6—H6 | 124.0 | N8—C20—H20 | 124.2 |
C6—C7—N1 | 105.3 (2) | C20—C21—N7 | 105.6 (2) |
C6—C7—H7 | 127.4 | C20—C21—H21 | 127.2 |
N1—C7—H7 | 127.4 | N7—C21—H21 | 127.2 |
C7—N1—C1—C2 | −178.7 (2) | C8—N4—C12—N5 | 179.0 (2) |
C5—N1—C1—C2 | 0.7 (4) | C14—N4—C12—C11 | 176.1 (2) |
N1—C1—C2—C3 | 1.9 (4) | C8—N4—C12—C11 | −3.6 (4) |
N1—C1—C2—Br1 | −177.80 (17) | C10—C11—C12—N5 | 179.6 (2) |
C1—C2—C3—C4 | −2.1 (4) | N6—C11—C12—N5 | −0.2 (4) |
Br1—C2—C3—C4 | 177.53 (18) | C10—C11—C12—N4 | 2.7 (3) |
C2—C3—C4—N3 | −178.6 (2) | N6—C11—C12—N4 | −177.1 (2) |
C2—C3—C4—C5 | −0.2 (4) | C12—N5—C13—C14 | −0.2 (3) |
C6—N2—C5—N1 | 0.7 (3) | N5—C13—C14—N4 | −0.6 (3) |
C6—N2—C5—C4 | −176.3 (2) | C8—N4—C14—C13 | −179.2 (2) |
C7—N1—C5—N2 | −0.6 (3) | C12—N4—C14—C13 | 1.1 (3) |
C1—N1—C5—N2 | 179.8 (2) | C21—N7—C15—C16 | 178.8 (2) |
C7—N1—C5—C4 | 176.6 (2) | C19—N7—C15—C16 | −1.5 (4) |
C1—N1—C5—C4 | −3.0 (4) | N7—C15—C16—C17 | 0.1 (4) |
N3—C4—C5—N2 | −2.2 (4) | N7—C15—C16—Br3 | −179.89 (17) |
C3—C4—C5—N2 | 179.3 (2) | C15—C16—C17—C18 | 1.8 (4) |
N3—C4—C5—N1 | −178.9 (2) | Br3—C16—C17—C18 | −178.21 (18) |
C3—C4—C5—N1 | 2.6 (3) | C16—C17—C18—N9 | 176.5 (2) |
C5—N2—C6—C7 | −0.5 (3) | C16—C17—C18—C19 | −2.3 (3) |
N2—C6—C7—N1 | 0.1 (3) | C20—N8—C19—N7 | −0.1 (3) |
C1—N1—C7—C6 | 179.8 (2) | C20—N8—C19—C18 | 179.5 (2) |
C5—N1—C7—C6 | 0.3 (3) | C21—N7—C19—N8 | 0.3 (3) |
C14—N4—C8—C9 | −178.1 (2) | C15—N7—C19—N8 | −179.5 (2) |
C12—N4—C8—C9 | 1.6 (4) | C21—N7—C19—C18 | −179.3 (2) |
N4—C8—C9—C10 | 1.3 (4) | C15—N7—C19—C18 | 0.9 (4) |
N4—C8—C9—Br2 | 178.65 (17) | N9—C18—C19—N8 | 2.6 (4) |
C8—C9—C10—C11 | −2.0 (4) | C17—C18—C19—N8 | −178.5 (2) |
Br2—C9—C10—C11 | −179.38 (19) | N9—C18—C19—N7 | −177.8 (2) |
C9—C10—C11—N6 | 179.7 (2) | C17—C18—C19—N7 | 1.0 (3) |
C9—C10—C11—C12 | −0.1 (4) | C19—N8—C20—C21 | −0.2 (3) |
C13—N5—C12—N4 | 0.9 (3) | N8—C20—C21—N7 | 0.4 (3) |
C13—N5—C12—C11 | −176.2 (2) | C15—N7—C21—C20 | 179.3 (2) |
C14—N4—C12—N5 | −1.3 (3) | C19—N7—C21—C20 | −0.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H31···N5 | 0.88 (1) | 2.16 (1) | 3.034 (3) | 169 (4) |
N6—H61···N2 | 0.88 (1) | 2.23 (1) | 3.094 (3) | 168 (3) |
N9—H91···N8i | 0.87 (1) | 2.27 (2) | 3.091 (3) | 158 (3) |
N9—H92···N6ii | 0.88 (1) | 2.27 (1) | 3.143 (3) | 177 (3) |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | C7H6BrN3 |
Mr | 212.06 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 15.1378 (5), 21.2006 (8), 6.9744 (3) |
β (°) | 92.6106 (7) |
V (Å3) | 2235.97 (15) |
Z | 12 |
Radiation type | Mo Kα |
µ (mm−1) | 5.44 |
Crystal size (mm) | 0.13 × 0.04 × 0.02 |
Data collection | |
Diffractometer | Bruker APEX DUO diffractometer |
Absorption correction | Multi-scan SADABS (Sheldrick, 1996)' |
Tmin, Tmax | 0.538, 0.899 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 44729, 5538, 4675 |
Rint | 0.048 |
(sin θ/λ)max (Å−1) | 0.666 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.078, 1.08 |
No. of reflections | 5538 |
No. of parameters | 322 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.15, −0.46 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H31···N5 | 0.88 (1) | 2.16 (1) | 3.034 (3) | 169 (4) |
N6—H61···N2 | 0.88 (1) | 2.23 (1) | 3.094 (3) | 168 (3) |
N9—H91···N8i | 0.87 (1) | 2.27 (2) | 3.091 (3) | 158 (3) |
N9—H92···N6ii | 0.88 (1) | 2.27 (1) | 3.143 (3) | 177 (3) |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x, y, z−1. |
Acknowledgements
We thank Université MohammedV-Agdal, Université Sidi Mohammed Ben Abdallah and the University of Malaya for supporting this study.
References
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8-Amino-6-bromo-imidazo[1,2-a]pyridine (Scheme I) was recently evaluated for its as a cyclin-dependent kinase-2 (CDK2) inhibitor (Dwyer et al., 2007). We have synthesized the compound for use in a similar study. The non-H atoms of the three independent molecules of C7H6BrN3 are planar (Fig. 1). Their primary amino groups show pyramidal coordination, and adjacent molecules are linked by N–H···N hydrogen bonds to form a layer structure. For two independent molecules, their amino groups are each a hydrogen-bond donor to one acceptor atom whereas for the third independent molecule, its amino group is hydrogen-bond bond to two acceptor atoms (Table 1).