organic compounds
3-[(Z)-Benzylidene]-2,3-dihydro-1,5-benzothiazepin-4(5H)-one
aDepartment of Physics, Presidency College, Chennai 600 005, India, and bDepartment of Organic Chemistry, University of Madras, Chennai 600 025, India
*Correspondence e-mail: aravindhanpresidency@gmail.com
In the title compound, C16H13NOS, the seven-membered ring adopts a distorted half-chair conformation. In the crystal, molecules are linked by N—H⋯O hydrogen bonds, forming chains running along the b axis. The crystal packing is further stabilized by C—H⋯O interactions.
Related literature
For the pharmaceutical properties of thiazepin derivatives, see: Tomascovic et al. (2000); Rajsner et al. (1971); Metys et al. (1965). For the conformation of thiazepin derivatives, see: Sridevi et al. (2011).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811042991/bt5678sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811042991/bt5678Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811042991/bt5678Isup3.cml
A mixture of (z)-methyl2-(bromomethyl)-3-phenylacrylate (2 mmol) and O-aminothiophenol(2 mmol) in the presence of potassium tert-butoxide (2,4 mmol) in dry THF (10 ml) was stirred at room temperature for 1 h. After the completion of the reaction as indicated by TLC, the reaction mixture was concentrated and the resulting crude mass was diluted with water (20 ml) and extracted with ethyl acetate (3X20ml). The organic layer was washed with brine (2X20ml) and dried over anhydrous sodium sulfate. The organic layer was concentrated, which provided a crude mass (Z)-methyl 2-((2-aminnophyenylthio)methyl)-3-phenylacrylate.The crude product was treated with a catalytic amount of p-toluene sulphonic acid (0.4 mmol),in p-xylene(10 ml), under reflux conditions for 12 h. After the completion of the reaction as indicated by TLC, the reaction mixture was concentrated under reduced pressure and worked up as mentioned previously, which successfully provide the crude final product. The final product was purified by
on silica gel to afford the title compound in good yield(71%).H atoms (except H10 and the amino H atom which were freely refined) were refined with fixed individual displacement parameters [U(H) = 1.2 Ueq(C)] using a riding model with C-H ranging from 0.93Å to 0.97Å.
Data collection: APEX2 (Bruker, 2004); cell
APEX2 (Bruker, 2004); data reduction: APEX2 [or SAINT?] (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).C16H13NOS | F(000) = 1120 |
Mr = 267.33 | Dx = 1.325 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 8725 reflections |
a = 10.7711 (9) Å | θ = 2.8–29.1° |
b = 7.8736 (7) Å | µ = 0.23 mm−1 |
c = 31.610 (3) Å | T = 293 K |
V = 2680.7 (4) Å3 | Orthorhombic, colourless |
Z = 8 | 0.2 × 0.2 × 0.2 mm |
Bruker KappaCCD APEXII diffractometer | 3306 independent reflections |
Radiation source: fine-focus sealed tube | 2643 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
Detector resolution: 15.9948 pixels mm-1 | θmax = 28.3°, θmin = 1.3° |
ω scans | h = −14→7 |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | k = −5→10 |
Tmin = 0.980, Tmax = 0.990 | l = −23→42 |
13085 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0544P)2 + 0.6524P] where P = (Fo2 + 2Fc2)/3 |
3306 reflections | (Δ/σ)max = 0.002 |
180 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C16H13NOS | V = 2680.7 (4) Å3 |
Mr = 267.33 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 10.7711 (9) Å | µ = 0.23 mm−1 |
b = 7.8736 (7) Å | T = 293 K |
c = 31.610 (3) Å | 0.2 × 0.2 × 0.2 mm |
Bruker KappaCCD APEXII diffractometer | 3306 independent reflections |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | 2643 reflections with I > 2σ(I) |
Tmin = 0.980, Tmax = 0.990 | Rint = 0.028 |
13085 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.35 e Å−3 |
3306 reflections | Δρmin = −0.22 e Å−3 |
180 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
H10 | 1.0606 (16) | −0.099 (2) | 0.6162 (5) | 0.048 (5)* | |
H | 0.8379 (16) | 0.440 (2) | 0.6294 (5) | 0.042 (4)* | |
S | 0.90221 (4) | 0.20135 (6) | 0.529568 (12) | 0.04764 (14) | |
O | 0.73812 (10) | 0.16660 (13) | 0.64118 (3) | 0.0435 (3) | |
N | 0.88207 (11) | 0.35628 (15) | 0.61960 (4) | 0.0351 (3) | |
C8 | 0.90106 (16) | 0.01129 (19) | 0.56317 (5) | 0.0461 (4) | |
H8A | 0.8216 | −0.0458 | 0.5605 | 0.055* | |
H8B | 0.9653 | −0.0665 | 0.5538 | 0.055* | |
C7 | 0.92280 (14) | 0.05759 (17) | 0.60855 (4) | 0.0359 (3) | |
C6 | 0.83940 (13) | 0.19642 (17) | 0.62461 (4) | 0.0333 (3) | |
C1 | 1.11685 (15) | 0.3856 (2) | 0.53349 (5) | 0.0445 (4) | |
H1 | 1.1331 | 0.3404 | 0.5069 | 0.053* | |
C5 | 0.98953 (13) | 0.39991 (16) | 0.59611 (4) | 0.0332 (3) | |
C2 | 1.19757 (16) | 0.5031 (2) | 0.55064 (6) | 0.0494 (4) | |
H2 | 1.2669 | 0.5381 | 0.5354 | 0.059* | |
C4 | 1.07215 (15) | 0.51731 (19) | 0.61325 (5) | 0.0432 (4) | |
H4 | 1.0580 | 0.5614 | 0.6401 | 0.052* | |
C9 | 1.01129 (14) | 0.33387 (17) | 0.55554 (4) | 0.0359 (3) | |
C16 | 0.98687 (17) | 0.1038 (2) | 0.70536 (5) | 0.0515 (4) | |
H16 | 0.9123 | 0.1553 | 0.6980 | 0.062* | |
C11 | 1.05193 (15) | 0.01041 (19) | 0.67530 (5) | 0.0412 (3) | |
C3 | 1.17543 (16) | 0.5686 (2) | 0.59035 (6) | 0.0494 (4) | |
H3 | 1.2300 | 0.6476 | 0.6019 | 0.059* | |
C13 | 1.2089 (2) | −0.0450 (3) | 0.72861 (7) | 0.0690 (6) | |
H13 | 1.2840 | −0.0947 | 0.7362 | 0.083* | |
C14 | 1.1430 (2) | 0.0472 (3) | 0.75774 (7) | 0.0667 (6) | |
H14 | 1.1730 | 0.0599 | 0.7851 | 0.080* | |
C10 | 1.01213 (15) | −0.01630 (18) | 0.63123 (5) | 0.0400 (3) | |
C12 | 1.16375 (17) | −0.0644 (2) | 0.68770 (6) | 0.0555 (4) | |
H12 | 1.2087 | −0.1283 | 0.6683 | 0.067* | |
C15 | 1.0318 (2) | 0.1210 (3) | 0.74614 (6) | 0.0626 (5) | |
H15 | 0.9867 | 0.1830 | 0.7659 | 0.075* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S | 0.0540 (3) | 0.0560 (3) | 0.0329 (2) | −0.00587 (19) | −0.00722 (17) | −0.00413 (17) |
O | 0.0376 (6) | 0.0446 (6) | 0.0483 (6) | −0.0052 (5) | 0.0072 (5) | −0.0052 (5) |
N | 0.0361 (7) | 0.0308 (6) | 0.0385 (6) | 0.0026 (5) | 0.0060 (5) | −0.0043 (5) |
C8 | 0.0582 (10) | 0.0399 (8) | 0.0403 (8) | −0.0077 (7) | 0.0035 (7) | −0.0108 (6) |
C7 | 0.0417 (8) | 0.0298 (6) | 0.0361 (7) | −0.0036 (6) | 0.0064 (6) | −0.0030 (5) |
C6 | 0.0345 (7) | 0.0355 (7) | 0.0299 (6) | −0.0014 (6) | −0.0017 (5) | −0.0031 (5) |
C1 | 0.0500 (9) | 0.0433 (8) | 0.0401 (8) | 0.0036 (7) | 0.0095 (7) | 0.0038 (7) |
C5 | 0.0341 (7) | 0.0283 (6) | 0.0372 (7) | 0.0031 (5) | 0.0010 (6) | 0.0020 (5) |
C2 | 0.0441 (9) | 0.0434 (8) | 0.0607 (10) | −0.0010 (7) | 0.0135 (8) | 0.0078 (7) |
C4 | 0.0464 (9) | 0.0358 (7) | 0.0472 (9) | −0.0032 (7) | 0.0022 (7) | −0.0056 (6) |
C9 | 0.0388 (8) | 0.0343 (7) | 0.0345 (7) | 0.0022 (6) | −0.0006 (6) | 0.0018 (5) |
C16 | 0.0490 (10) | 0.0629 (10) | 0.0425 (9) | 0.0091 (8) | −0.0011 (7) | −0.0004 (8) |
C11 | 0.0413 (8) | 0.0367 (7) | 0.0457 (8) | 0.0010 (6) | 0.0020 (7) | 0.0063 (6) |
C3 | 0.0447 (9) | 0.0383 (8) | 0.0652 (11) | −0.0079 (7) | 0.0023 (8) | −0.0021 (7) |
C13 | 0.0549 (11) | 0.0700 (13) | 0.0821 (14) | 0.0031 (10) | −0.0195 (10) | 0.0156 (11) |
C14 | 0.0707 (13) | 0.0733 (13) | 0.0561 (11) | −0.0123 (11) | −0.0206 (10) | 0.0097 (10) |
C10 | 0.0448 (9) | 0.0311 (7) | 0.0442 (8) | 0.0034 (6) | 0.0101 (7) | −0.0017 (6) |
C12 | 0.0491 (10) | 0.0524 (10) | 0.0649 (11) | 0.0090 (8) | 0.0010 (8) | 0.0075 (8) |
C15 | 0.0678 (13) | 0.0746 (12) | 0.0454 (9) | 0.0002 (10) | −0.0033 (9) | −0.0049 (9) |
S—C9 | 1.7728 (15) | C2—H2 | 0.9300 |
S—C8 | 1.8352 (17) | C4—C3 | 1.387 (2) |
O—C6 | 1.2326 (17) | C4—H4 | 0.9300 |
N—C6 | 1.3493 (18) | C16—C15 | 1.384 (2) |
N—C5 | 1.4174 (18) | C16—C11 | 1.391 (2) |
N—H | 0.872 (18) | C16—H16 | 0.9300 |
C8—C7 | 1.498 (2) | C11—C12 | 1.397 (2) |
C8—H8A | 0.9700 | C11—C10 | 1.473 (2) |
C8—H8B | 0.9700 | C3—H3 | 0.9300 |
C7—C10 | 1.334 (2) | C13—C14 | 1.371 (3) |
C7—C6 | 1.503 (2) | C13—C12 | 1.390 (3) |
C6—O | 1.2326 (17) | C13—H13 | 0.9300 |
C1—C2 | 1.381 (2) | C14—C15 | 1.381 (3) |
C1—C9 | 1.394 (2) | C14—H14 | 0.9300 |
C1—H1 | 0.9300 | C10—H10 | 0.962 (18) |
C5—C4 | 1.393 (2) | C12—H12 | 0.9300 |
C5—C9 | 1.4037 (19) | C15—H15 | 0.9300 |
C2—C3 | 1.378 (2) | ||
C9—S—C8 | 102.50 (7) | C5—C4—H4 | 119.9 |
C6—N—C5 | 124.46 (12) | C1—C9—C5 | 118.98 (14) |
C6—N—H | 118.7 (11) | C1—C9—S | 118.75 (12) |
C5—N—H | 116.6 (11) | C5—C9—S | 122.04 (11) |
C7—C8—S | 110.78 (10) | C15—C16—C11 | 120.80 (17) |
C7—C8—H8A | 109.5 | C15—C16—H16 | 119.6 |
S—C8—H8A | 109.5 | C11—C16—H16 | 119.6 |
C7—C8—H8B | 109.5 | C16—C11—C12 | 117.75 (16) |
S—C8—H8B | 109.5 | C16—C11—C10 | 125.11 (15) |
H8A—C8—H8B | 108.1 | C12—C11—C10 | 117.14 (15) |
C10—C7—C8 | 121.42 (14) | C2—C3—C4 | 120.34 (16) |
C10—C7—C6 | 124.53 (13) | C2—C3—H3 | 119.8 |
C8—C7—C6 | 114.01 (13) | C4—C3—H3 | 119.8 |
O—C6—N | 121.94 (13) | C14—C13—C12 | 120.12 (19) |
O—C6—N | 121.94 (13) | C14—C13—H13 | 119.9 |
O—C6—C7 | 122.26 (13) | C12—C13—H13 | 119.9 |
O—C6—C7 | 122.26 (13) | C13—C14—C15 | 119.60 (19) |
N—C6—C7 | 115.79 (12) | C13—C14—H14 | 120.2 |
C2—C1—C9 | 120.89 (15) | C15—C14—H14 | 120.2 |
C2—C1—H1 | 119.6 | C7—C10—C11 | 131.02 (14) |
C9—C1—H1 | 119.6 | C7—C10—H10 | 115.1 (11) |
C4—C5—C9 | 119.65 (13) | C11—C10—H10 | 113.9 (11) |
C4—C5—N | 118.61 (13) | C13—C12—C11 | 121.10 (18) |
C9—C5—N | 121.68 (13) | C13—C12—H12 | 119.5 |
C3—C2—C1 | 119.96 (15) | C11—C12—H12 | 119.5 |
C3—C2—H2 | 120.0 | C14—C15—C16 | 120.63 (19) |
C1—C2—H2 | 120.0 | C14—C15—H15 | 119.7 |
C3—C4—C5 | 120.17 (15) | C16—C15—H15 | 119.7 |
C3—C4—H4 | 119.9 | ||
C9—S—C8—C7 | 32.87 (13) | C4—C5—C9—C1 | 1.0 (2) |
S—C8—C7—C10 | −126.73 (14) | N—C5—C9—C1 | 178.07 (13) |
S—C8—C7—C6 | 50.98 (16) | C4—C5—C9—S | −173.34 (11) |
O—O—C6—N | 0.0 (4) | N—C5—C9—S | 3.70 (19) |
O—O—C6—C7 | 0.0 (3) | C8—S—C9—C1 | 120.08 (13) |
C5—N—C6—O | −171.54 (13) | C8—S—C9—C5 | −65.54 (13) |
C5—N—C6—O | −171.54 (13) | C15—C16—C11—C12 | −0.2 (3) |
C5—N—C6—C7 | 8.2 (2) | C15—C16—C11—C10 | 179.74 (17) |
C10—C7—C6—O | −92.01 (19) | C1—C2—C3—C4 | −0.1 (3) |
C8—C7—C6—O | 90.37 (16) | C5—C4—C3—C2 | −0.4 (3) |
C10—C7—C6—O | −92.01 (19) | C12—C13—C14—C15 | −0.2 (3) |
C8—C7—C6—O | 90.37 (16) | C8—C7—C10—C11 | 178.60 (15) |
C10—C7—C6—N | 88.27 (18) | C6—C7—C10—C11 | 1.1 (3) |
C8—C7—C6—N | −89.35 (16) | C16—C11—C10—C7 | 11.7 (3) |
C6—N—C5—C4 | −135.93 (15) | C12—C11—C10—C7 | −168.36 (17) |
C6—N—C5—C9 | 47.0 (2) | C14—C13—C12—C11 | 0.7 (3) |
C9—C1—C2—C3 | 1.1 (2) | C16—C11—C12—C13 | −0.5 (3) |
C9—C5—C4—C3 | 0.0 (2) | C10—C11—C12—C13 | 179.57 (17) |
N—C5—C4—C3 | −177.16 (14) | C13—C14—C15—C16 | −0.4 (3) |
C2—C1—C9—C5 | −1.6 (2) | C11—C16—C15—C14 | 0.6 (3) |
C2—C1—C9—S | 172.96 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H···Oi | 0.872 (18) | 1.996 (18) | 2.8480 (16) | 165.4 (16) |
C14—H14···Oii | 0.93 | 2.57 | 3.485 (2) | 167 |
C16—H16···O | 0.93 | 2.60 | 3.397 (2) | 144 |
Symmetry codes: (i) −x+3/2, y+1/2, z; (ii) x+1/2, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C16H13NOS |
Mr | 267.33 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 293 |
a, b, c (Å) | 10.7711 (9), 7.8736 (7), 31.610 (3) |
V (Å3) | 2680.7 (4) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.2 × 0.2 × 0.2 |
Data collection | |
Diffractometer | Bruker KappaCCD APEXII diffractometer |
Absorption correction | Multi-scan (APEX2; Bruker, 2004) |
Tmin, Tmax | 0.980, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13085, 3306, 2643 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.112, 1.04 |
No. of reflections | 3306 |
No. of parameters | 180 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.35, −0.22 |
Computer programs: APEX2 (Bruker, 2004), APEX2 [or SAINT?] (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N—H···Oi | 0.872 (18) | 1.996 (18) | 2.8480 (16) | 165.4 (16) |
C14—H14···Oii | 0.93 | 2.57 | 3.485 (2) | 166.6 |
C16—H16···O | 0.93 | 2.60 | 3.397 (2) | 144.4 |
Symmetry codes: (i) −x+3/2, y+1/2, z; (ii) x+1/2, y, −z+3/2. |
Acknowledgements
SA thanks the UGC, India, for financial support.
References
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The title compound is used as an intermediate for the synthesis of dosulepin, which is an antidepressant of the tricyclic family. Dosulepin prevents reabsorbing of serotonin and noradrenaline in the brain, helps to prolong the mood lightening effect of any released noradrenaline and serotonin, thus relieving depression. The dibenzo[c,e]thiazepin derivatives exhibit chiroptical properties (Tomascovic et al., 2000). Dibenzo[b,e]thiazepin-5,5-dioxide derivatives possess antihistaminic and antiallergenic activities (Rajsner et al., 1971). Benzene thiazepin derivatives are identified as a new type of effective antihistaminic compounds (Metys et al., 1965). Considering the wide range of biological activities of the thiazepin derivatives, we determined the crystal structure of the title compound. The seven membered thiazepin ring adopts a distorted half-chair conformation (Sridevi et al., 2011). Crystal structure and crystal packing of the molecule were stabilized by intra (C16—H16···O) and Inter (N—H···O, C14—H14···O) molecular interaction.