organic compounds
5-[(E)-4-Fluorobenzylidene]-8-(4-fluorophenyl)-2-hydroxy-9-phenyl-3,10-diazahexacyclo[10.7.1.13,7.02,11.07,11.016,20]henicosa-1(20),12,14,16,18-pentaen-6-one
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bSchool of Pharmaceutical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and cX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C38H28F2N2O2, the piperidine ring adopts a chair conformation and the pyrrolidine ring adopts an with the spiro C atom as the flap atom. The naphthalene ring system makes dihedral angles of 39.89 (8), 35.33 (8) and 46.45 (8)° with the two fluoro-substituted benzene rings and the phenyl ring, respectively, while the dihedral angle between the two fluoro-substituted benzene rings is 75.21 (10)°. An intramolecular O—H⋯N hydrogen bond generates an S(5) ring. In the crystal, molecules are connected by C—H⋯O hydrogen bonds, forming supramolecular chains propagating along the c-axis direction. Weak C—H⋯π interactions further consolidate the structure.
Related literature
For further details of 1,3-dipolar cycloaddition, see: Suresh Kumar et al. (2011); Jayashankaran et al. (2005); Manian et al. (2006); Williams & Fegley (1992). For ring conformations, see: Cremer & Pople (1975).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811040633/hb6426sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811040633/hb6426Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536811040633/hb6426Isup3.cml
A mixture of 3,5-bis[(E)-(4-fluorophenyl)methylidene]tetrahydro-4 (1H)-pyridinone (1 mmol), acenaphthenequinone (1 mmol), and phenyl glycine (1 mmol) were dissolved in methanol (5 mL) and refluxed in a water bath for 1 hour. After completion of the reaction as evident from TLC, the mixture was poured into water (50 mL). The precipitated solid was filtered and washed with water to obtain the product which was further purified by recrystallisation from ethyl acetate to yield colourless blocks.
Atoms H1O2 and H1N2 were located from a difference Fourier maps and refined freely [N–H = 0.91 (2) Å and O–H = 0.90 (2) Å]. The remaining H atoms were positioned geometrically [C–H = 0.93–0.98 Å] and were refined using a riding model, with Uiso(H) = 1.2 Ueq(C).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The asymmetric unit of the title compound, showing 30% probability displacement ellipsoids. | |
Fig. 2. The crystal packing of the title compound (I). H atoms not involved in hydrogen bonding are omitted. |
C38H28F2N2O2 | Z = 2 |
Mr = 582.62 | F(000) = 608 |
Triclinic, P1 | Dx = 1.333 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.3269 (3) Å | Cell parameters from 4467 reflections |
b = 11.8635 (4) Å | θ = 2.6–27.1° |
c = 14.2095 (4) Å | µ = 0.09 mm−1 |
α = 75.904 (2)° | T = 296 K |
β = 74.726 (2)° | Block, colourless |
γ = 77.627 (2)° | 0.39 × 0.25 × 0.15 mm |
V = 1452.01 (8) Å3 |
Bruker SMART APEXII CCD diffractometer | 5915 independent reflections |
Radiation source: fine-focus sealed tube | 4221 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ϕ and ω scans | θmax = 26.5°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −11→11 |
Tmin = 0.965, Tmax = 0.987 | k = −14→14 |
16981 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.115 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0505P)2 + 0.1929P] where P = (Fo2 + 2Fc2)/3 |
5915 reflections | (Δ/σ)max < 0.001 |
405 parameters | Δρmax = 0.17 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C38H28F2N2O2 | γ = 77.627 (2)° |
Mr = 582.62 | V = 1452.01 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.3269 (3) Å | Mo Kα radiation |
b = 11.8635 (4) Å | µ = 0.09 mm−1 |
c = 14.2095 (4) Å | T = 296 K |
α = 75.904 (2)° | 0.39 × 0.25 × 0.15 mm |
β = 74.726 (2)° |
Bruker SMART APEXII CCD diffractometer | 5915 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4221 reflections with I > 2σ(I) |
Tmin = 0.965, Tmax = 0.987 | Rint = 0.033 |
16981 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.115 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.17 e Å−3 |
5915 reflections | Δρmin = −0.20 e Å−3 |
405 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.31463 (18) | 0.41565 (14) | 0.63374 (12) | 0.1021 (5) | |
F2 | 0.56249 (16) | −0.63672 (10) | 0.27077 (12) | 0.0887 (4) | |
O1 | 0.19391 (15) | −0.13595 (11) | 0.41318 (8) | 0.0499 (3) | |
O2 | 0.40049 (15) | 0.12921 (11) | 0.03939 (8) | 0.0451 (3) | |
N1 | 0.46807 (15) | 0.06737 (11) | 0.19282 (9) | 0.0358 (3) | |
N2 | 0.17795 (18) | 0.00560 (12) | 0.10268 (9) | 0.0376 (3) | |
C1 | 0.08709 (18) | 0.11620 (13) | 0.24038 (10) | 0.0338 (3) | |
C2 | −0.0512 (2) | 0.09298 (16) | 0.29527 (12) | 0.0451 (4) | |
H2A | −0.0774 | 0.0189 | 0.3052 | 0.054* | |
C3 | −0.1538 (2) | 0.18431 (18) | 0.33664 (14) | 0.0553 (5) | |
H3A | −0.2463 | 0.1678 | 0.3765 | 0.066* | |
C4 | −0.1225 (2) | 0.29506 (18) | 0.32049 (14) | 0.0556 (5) | |
H4A | −0.1936 | 0.3526 | 0.3486 | 0.067* | |
C5 | 0.0179 (2) | 0.32359 (15) | 0.26106 (12) | 0.0445 (4) | |
C6 | 0.0639 (3) | 0.43508 (16) | 0.22979 (15) | 0.0567 (5) | |
H6A | −0.0006 | 0.5002 | 0.2507 | 0.068* | |
C7 | 0.2025 (3) | 0.44862 (16) | 0.16899 (16) | 0.0583 (5) | |
H7A | 0.2288 | 0.5236 | 0.1481 | 0.070* | |
C8 | 0.3068 (2) | 0.35270 (15) | 0.13694 (13) | 0.0477 (4) | |
H8A | 0.4013 | 0.3636 | 0.0970 | 0.057* | |
C9 | 0.26533 (19) | 0.24316 (14) | 0.16619 (11) | 0.0370 (4) | |
C10 | 0.12161 (19) | 0.23011 (13) | 0.22507 (11) | 0.0359 (4) | |
C11 | 0.34421 (18) | 0.12516 (13) | 0.14237 (10) | 0.0344 (4) | |
C13 | 0.23219 (19) | −0.12206 (13) | 0.10589 (11) | 0.0350 (4) | |
H13A | 0.3328 | −0.1310 | 0.0621 | 0.042* | |
C14 | 0.24873 (18) | −0.17285 (13) | 0.21430 (10) | 0.0333 (3) | |
H14A | 0.1473 | −0.1791 | 0.2554 | 0.040* | |
C15 | 0.30126 (17) | −0.07313 (13) | 0.24017 (10) | 0.0316 (3) | |
C16 | 0.21783 (18) | 0.04178 (13) | 0.18294 (10) | 0.0325 (3) | |
C17 | 0.26517 (18) | −0.06749 (13) | 0.34904 (11) | 0.0343 (4) | |
C18 | 0.31892 (18) | 0.03074 (13) | 0.37188 (11) | 0.0345 (4) | |
C19 | 0.44652 (19) | 0.08607 (15) | 0.29507 (11) | 0.0381 (4) | |
H19A | 0.4271 | 0.1701 | 0.2934 | 0.046* | |
H19B | 0.5397 | 0.0543 | 0.3171 | 0.046* | |
C20 | 0.46882 (18) | −0.05780 (14) | 0.19841 (12) | 0.0373 (4) | |
H20A | 0.5312 | −0.1069 | 0.2426 | 0.045* | |
H20B | 0.5058 | −0.0778 | 0.1331 | 0.045* | |
C21 | 0.2415 (2) | 0.06910 (14) | 0.45470 (11) | 0.0397 (4) | |
H21A | 0.1604 | 0.0311 | 0.4903 | 0.048* | |
C22 | 0.26546 (19) | 0.16222 (15) | 0.49779 (11) | 0.0397 (4) | |
C23 | 0.1410 (2) | 0.23249 (19) | 0.54396 (15) | 0.0630 (6) | |
H23A | 0.0448 | 0.2219 | 0.5445 | 0.076* | |
C24 | 0.1579 (3) | 0.3180 (2) | 0.58917 (18) | 0.0773 (7) | |
H24A | 0.0740 | 0.3656 | 0.6192 | 0.093* | |
C25 | 0.2994 (3) | 0.33166 (19) | 0.58914 (15) | 0.0619 (6) | |
C26 | 0.4247 (2) | 0.26458 (17) | 0.54571 (14) | 0.0540 (5) | |
H26A | 0.5201 | 0.2753 | 0.5468 | 0.065* | |
C27 | 0.4069 (2) | 0.17962 (16) | 0.49972 (12) | 0.0457 (4) | |
H27A | 0.4918 | 0.1332 | 0.4694 | 0.055* | |
C28 | 0.1336 (2) | −0.18155 (14) | 0.07132 (12) | 0.0394 (4) | |
C29 | 0.1885 (2) | −0.22550 (17) | −0.01543 (13) | 0.0551 (5) | |
H29A | 0.2832 | −0.2131 | −0.0543 | 0.066* | |
C30 | 0.1038 (3) | −0.28786 (19) | −0.04489 (18) | 0.0736 (7) | |
H30A | 0.1420 | −0.3172 | −0.1031 | 0.088* | |
C31 | −0.0349 (3) | −0.30622 (19) | 0.0110 (2) | 0.0766 (7) | |
H31A | −0.0904 | −0.3495 | −0.0084 | 0.092* | |
C32 | −0.0932 (3) | −0.2612 (2) | 0.09581 (17) | 0.0706 (6) | |
H32A | −0.1889 | −0.2725 | 0.1333 | 0.085* | |
C33 | −0.0093 (2) | −0.19859 (18) | 0.12561 (14) | 0.0551 (5) | |
H33A | −0.0497 | −0.1676 | 0.1829 | 0.066* | |
C34 | 0.34205 (19) | −0.29458 (13) | 0.23043 (11) | 0.0361 (4) | |
C35 | 0.4672 (2) | −0.33131 (15) | 0.16058 (13) | 0.0463 (4) | |
H35A | 0.5004 | −0.2780 | 0.1029 | 0.056* | |
C36 | 0.5438 (2) | −0.44564 (16) | 0.17465 (16) | 0.0561 (5) | |
H36A | 0.6284 | −0.4692 | 0.1277 | 0.067* | |
C37 | 0.4923 (2) | −0.52266 (15) | 0.25895 (17) | 0.0574 (5) | |
C38 | 0.3723 (3) | −0.49040 (17) | 0.33078 (16) | 0.0604 (5) | |
H38A | 0.3414 | −0.5444 | 0.3885 | 0.073* | |
C39 | 0.2972 (2) | −0.37606 (15) | 0.31647 (13) | 0.0485 (4) | |
H39A | 0.2150 | −0.3531 | 0.3653 | 0.058* | |
H1O2 | 0.334 (2) | 0.0994 (18) | 0.0207 (15) | 0.068 (7)* | |
H1N2 | 0.078 (2) | 0.0265 (17) | 0.1045 (15) | 0.063 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.1084 (12) | 0.1056 (11) | 0.1283 (12) | −0.0232 (9) | −0.0316 (10) | −0.0792 (10) |
F2 | 0.0824 (10) | 0.0379 (6) | 0.1443 (12) | 0.0081 (6) | −0.0506 (9) | −0.0034 (7) |
O1 | 0.0685 (9) | 0.0515 (7) | 0.0319 (6) | −0.0280 (6) | −0.0041 (6) | −0.0042 (5) |
O2 | 0.0559 (8) | 0.0511 (7) | 0.0276 (6) | −0.0205 (6) | 0.0018 (5) | −0.0083 (5) |
N1 | 0.0367 (8) | 0.0365 (7) | 0.0340 (7) | −0.0090 (6) | −0.0025 (6) | −0.0097 (5) |
N2 | 0.0495 (9) | 0.0322 (7) | 0.0346 (7) | −0.0078 (7) | −0.0143 (6) | −0.0067 (5) |
C1 | 0.0363 (9) | 0.0351 (8) | 0.0293 (7) | −0.0041 (7) | −0.0074 (7) | −0.0062 (6) |
C2 | 0.0418 (10) | 0.0445 (10) | 0.0446 (9) | −0.0072 (8) | −0.0053 (8) | −0.0054 (8) |
C3 | 0.0398 (11) | 0.0667 (13) | 0.0510 (11) | −0.0010 (9) | 0.0002 (9) | −0.0138 (9) |
C4 | 0.0485 (12) | 0.0602 (13) | 0.0569 (11) | 0.0106 (10) | −0.0112 (9) | −0.0270 (9) |
C5 | 0.0515 (11) | 0.0416 (10) | 0.0458 (9) | 0.0031 (8) | −0.0189 (8) | −0.0194 (8) |
C6 | 0.0693 (14) | 0.0393 (10) | 0.0703 (13) | 0.0041 (10) | −0.0281 (11) | −0.0247 (9) |
C7 | 0.0788 (16) | 0.0332 (10) | 0.0742 (13) | −0.0109 (10) | −0.0338 (12) | −0.0117 (9) |
C8 | 0.0576 (12) | 0.0374 (10) | 0.0532 (10) | −0.0153 (9) | −0.0162 (9) | −0.0075 (8) |
C9 | 0.0470 (10) | 0.0334 (8) | 0.0338 (8) | −0.0086 (7) | −0.0122 (7) | −0.0073 (6) |
C10 | 0.0439 (10) | 0.0344 (8) | 0.0322 (8) | −0.0044 (7) | −0.0127 (7) | −0.0087 (6) |
C11 | 0.0393 (9) | 0.0351 (8) | 0.0281 (7) | −0.0104 (7) | −0.0012 (7) | −0.0076 (6) |
C13 | 0.0413 (9) | 0.0325 (8) | 0.0317 (8) | −0.0078 (7) | −0.0060 (7) | −0.0080 (6) |
C14 | 0.0366 (9) | 0.0332 (8) | 0.0307 (7) | −0.0083 (7) | −0.0056 (6) | −0.0074 (6) |
C15 | 0.0354 (9) | 0.0300 (8) | 0.0291 (7) | −0.0066 (7) | −0.0052 (6) | −0.0063 (6) |
C16 | 0.0390 (9) | 0.0296 (8) | 0.0290 (7) | −0.0085 (7) | −0.0059 (6) | −0.0056 (6) |
C17 | 0.0358 (9) | 0.0348 (8) | 0.0311 (8) | −0.0061 (7) | −0.0070 (7) | −0.0047 (6) |
C18 | 0.0372 (9) | 0.0362 (8) | 0.0307 (8) | −0.0071 (7) | −0.0087 (7) | −0.0056 (6) |
C19 | 0.0381 (9) | 0.0423 (9) | 0.0369 (8) | −0.0115 (7) | −0.0075 (7) | −0.0102 (7) |
C20 | 0.0374 (9) | 0.0366 (9) | 0.0364 (8) | −0.0048 (7) | −0.0037 (7) | −0.0101 (7) |
C21 | 0.0435 (10) | 0.0435 (9) | 0.0339 (8) | −0.0133 (8) | −0.0071 (7) | −0.0069 (7) |
C22 | 0.0447 (10) | 0.0454 (10) | 0.0301 (8) | −0.0108 (8) | −0.0043 (7) | −0.0107 (7) |
C23 | 0.0445 (11) | 0.0833 (15) | 0.0718 (13) | −0.0175 (11) | 0.0027 (10) | −0.0456 (12) |
C24 | 0.0604 (14) | 0.0917 (17) | 0.0944 (17) | −0.0149 (13) | 0.0037 (12) | −0.0661 (14) |
C25 | 0.0756 (15) | 0.0627 (13) | 0.0626 (12) | −0.0189 (11) | −0.0156 (11) | −0.0335 (10) |
C26 | 0.0565 (12) | 0.0600 (12) | 0.0558 (11) | −0.0145 (10) | −0.0243 (10) | −0.0136 (9) |
C27 | 0.0448 (10) | 0.0504 (11) | 0.0451 (9) | −0.0045 (8) | −0.0149 (8) | −0.0130 (8) |
C28 | 0.0511 (11) | 0.0321 (8) | 0.0381 (8) | −0.0064 (7) | −0.0169 (8) | −0.0055 (7) |
C29 | 0.0700 (14) | 0.0553 (12) | 0.0475 (10) | −0.0040 (10) | −0.0224 (10) | −0.0192 (9) |
C30 | 0.109 (2) | 0.0606 (14) | 0.0721 (14) | −0.0011 (14) | −0.0513 (15) | −0.0295 (11) |
C31 | 0.113 (2) | 0.0535 (13) | 0.0912 (17) | −0.0260 (14) | −0.0699 (17) | −0.0037 (12) |
C32 | 0.0741 (15) | 0.0735 (15) | 0.0764 (15) | −0.0347 (12) | −0.0385 (13) | 0.0060 (12) |
C33 | 0.0587 (13) | 0.0617 (12) | 0.0526 (11) | −0.0207 (10) | −0.0174 (10) | −0.0107 (9) |
C34 | 0.0414 (9) | 0.0313 (8) | 0.0395 (8) | −0.0102 (7) | −0.0120 (7) | −0.0074 (7) |
C35 | 0.0485 (11) | 0.0342 (9) | 0.0546 (10) | −0.0083 (8) | −0.0073 (9) | −0.0087 (8) |
C36 | 0.0456 (11) | 0.0436 (11) | 0.0806 (14) | −0.0014 (9) | −0.0146 (10) | −0.0195 (10) |
C37 | 0.0573 (13) | 0.0317 (10) | 0.0896 (15) | −0.0016 (9) | −0.0389 (12) | −0.0045 (10) |
C38 | 0.0750 (15) | 0.0423 (11) | 0.0630 (12) | −0.0126 (10) | −0.0296 (11) | 0.0096 (9) |
C39 | 0.0589 (12) | 0.0414 (10) | 0.0442 (9) | −0.0119 (9) | −0.0133 (9) | −0.0013 (8) |
F1—C25 | 1.353 (2) | C17—C18 | 1.495 (2) |
F2—C37 | 1.362 (2) | C18—C21 | 1.336 (2) |
O1—C17 | 1.2181 (18) | C18—C19 | 1.530 (2) |
O2—C11 | 1.4110 (17) | C19—H19A | 0.9700 |
O2—H1O2 | 0.90 (2) | C19—H19B | 0.9700 |
N1—C20 | 1.466 (2) | C20—H20A | 0.9700 |
N1—C11 | 1.475 (2) | C20—H20B | 0.9700 |
N1—C19 | 1.4781 (19) | C21—C22 | 1.467 (2) |
N2—C16 | 1.4675 (19) | C21—H21A | 0.9300 |
N2—C13 | 1.484 (2) | C22—C27 | 1.386 (2) |
N2—H1N2 | 0.91 (2) | C22—C23 | 1.387 (2) |
C1—C2 | 1.366 (2) | C23—C24 | 1.380 (3) |
C1—C10 | 1.408 (2) | C23—H23A | 0.9300 |
C1—C16 | 1.516 (2) | C24—C25 | 1.363 (3) |
C2—C3 | 1.416 (2) | C24—H24A | 0.9300 |
C2—H2A | 0.9300 | C25—C26 | 1.357 (3) |
C3—C4 | 1.359 (3) | C26—C27 | 1.386 (2) |
C3—H3A | 0.9300 | C26—H26A | 0.9300 |
C4—C5 | 1.418 (3) | C27—H27A | 0.9300 |
C4—H4A | 0.9300 | C28—C33 | 1.382 (3) |
C5—C10 | 1.408 (2) | C28—C29 | 1.386 (2) |
C5—C6 | 1.410 (3) | C29—C30 | 1.387 (3) |
C6—C7 | 1.370 (3) | C29—H29A | 0.9300 |
C6—H6A | 0.9300 | C30—C31 | 1.359 (3) |
C7—C8 | 1.412 (3) | C30—H30A | 0.9300 |
C7—H7A | 0.9300 | C31—C32 | 1.371 (3) |
C8—C9 | 1.371 (2) | C31—H31A | 0.9300 |
C8—H8A | 0.9300 | C32—C33 | 1.386 (3) |
C9—C10 | 1.398 (2) | C32—H32A | 0.9300 |
C9—C11 | 1.508 (2) | C33—H33A | 0.9300 |
C11—C16 | 1.601 (2) | C34—C35 | 1.385 (2) |
C13—C28 | 1.506 (2) | C34—C39 | 1.390 (2) |
C13—C14 | 1.547 (2) | C35—C36 | 1.385 (2) |
C13—H13A | 0.9800 | C35—H35A | 0.9300 |
C14—C34 | 1.517 (2) | C36—C37 | 1.361 (3) |
C14—C15 | 1.526 (2) | C36—H36A | 0.9300 |
C14—H14A | 0.9800 | C37—C38 | 1.359 (3) |
C15—C17 | 1.509 (2) | C38—C39 | 1.381 (3) |
C15—C20 | 1.552 (2) | C38—H38A | 0.9300 |
C15—C16 | 1.570 (2) | C39—H39A | 0.9300 |
C11—O2—H1O2 | 104.9 (13) | C21—C18—C19 | 125.49 (15) |
C20—N1—C11 | 102.48 (12) | C17—C18—C19 | 118.04 (12) |
C20—N1—C19 | 108.12 (12) | N1—C19—C18 | 115.25 (13) |
C11—N1—C19 | 115.60 (12) | N1—C19—H19A | 108.5 |
C16—N2—C13 | 109.96 (12) | C18—C19—H19A | 108.5 |
C16—N2—H1N2 | 111.2 (13) | N1—C19—H19B | 108.5 |
C13—N2—H1N2 | 113.2 (13) | C18—C19—H19B | 108.5 |
C2—C1—C10 | 119.20 (15) | H19A—C19—H19B | 107.5 |
C2—C1—C16 | 131.77 (15) | N1—C20—C15 | 104.08 (12) |
C10—C1—C16 | 108.91 (13) | N1—C20—H20A | 110.9 |
C1—C2—C3 | 118.44 (17) | C15—C20—H20A | 110.9 |
C1—C2—H2A | 120.8 | N1—C20—H20B | 110.9 |
C3—C2—H2A | 120.8 | C15—C20—H20B | 110.9 |
C4—C3—C2 | 122.67 (18) | H20A—C20—H20B | 109.0 |
C4—C3—H3A | 118.7 | C18—C21—C22 | 129.62 (16) |
C2—C3—H3A | 118.7 | C18—C21—H21A | 115.2 |
C3—C4—C5 | 120.48 (16) | C22—C21—H21A | 115.2 |
C3—C4—H4A | 119.8 | C27—C22—C23 | 117.87 (16) |
C5—C4—H4A | 119.8 | C27—C22—C21 | 123.22 (15) |
C10—C5—C6 | 115.95 (17) | C23—C22—C21 | 118.81 (16) |
C10—C5—C4 | 116.03 (16) | C24—C23—C22 | 120.89 (19) |
C6—C5—C4 | 127.95 (17) | C24—C23—H23A | 119.6 |
C7—C6—C5 | 120.74 (17) | C22—C23—H23A | 119.6 |
C7—C6—H6A | 119.6 | C25—C24—C23 | 119.03 (19) |
C5—C6—H6A | 119.6 | C25—C24—H24A | 120.5 |
C6—C7—C8 | 122.24 (18) | C23—C24—H24A | 120.5 |
C6—C7—H7A | 118.9 | F1—C25—C26 | 119.1 (2) |
C8—C7—H7A | 118.9 | F1—C25—C24 | 118.54 (19) |
C9—C8—C7 | 118.34 (18) | C26—C25—C24 | 122.37 (18) |
C9—C8—H8A | 120.8 | C25—C26—C27 | 118.26 (18) |
C7—C8—H8A | 120.8 | C25—C26—H26A | 120.9 |
C8—C9—C10 | 119.39 (16) | C27—C26—H26A | 120.9 |
C8—C9—C11 | 132.10 (16) | C26—C27—C22 | 121.57 (17) |
C10—C9—C11 | 108.41 (13) | C26—C27—H27A | 119.2 |
C9—C10—C5 | 123.22 (16) | C22—C27—H27A | 119.2 |
C9—C10—C1 | 113.65 (14) | C33—C28—C29 | 118.09 (17) |
C5—C10—C1 | 123.03 (16) | C33—C28—C13 | 122.14 (15) |
O2—C11—N1 | 107.74 (12) | C29—C28—C13 | 119.71 (17) |
O2—C11—C9 | 112.93 (12) | C28—C29—C30 | 120.6 (2) |
N1—C11—C9 | 115.59 (12) | C28—C29—H29A | 119.7 |
O2—C11—C16 | 109.11 (12) | C30—C29—H29A | 119.7 |
N1—C11—C16 | 106.18 (11) | C31—C30—C29 | 120.3 (2) |
C9—C11—C16 | 104.93 (12) | C31—C30—H30A | 119.9 |
N2—C13—C28 | 113.74 (14) | C29—C30—H30A | 119.9 |
N2—C13—C14 | 104.58 (11) | C30—C31—C32 | 120.2 (2) |
C28—C13—C14 | 114.42 (13) | C30—C31—H31A | 119.9 |
N2—C13—H13A | 107.9 | C32—C31—H31A | 119.9 |
C28—C13—H13A | 107.9 | C31—C32—C33 | 119.9 (2) |
C14—C13—H13A | 107.9 | C31—C32—H32A | 120.1 |
C34—C14—C15 | 117.75 (13) | C33—C32—H32A | 120.1 |
C34—C14—C13 | 114.81 (12) | C28—C33—C32 | 120.91 (19) |
C15—C14—C13 | 102.44 (11) | C28—C33—H33A | 119.5 |
C34—C14—H14A | 107.1 | C32—C33—H33A | 119.5 |
C15—C14—H14A | 107.1 | C35—C34—C39 | 117.66 (16) |
C13—C14—H14A | 107.1 | C35—C34—C14 | 122.94 (14) |
C17—C15—C14 | 116.38 (12) | C39—C34—C14 | 119.31 (15) |
C17—C15—C20 | 106.73 (12) | C36—C35—C34 | 121.48 (17) |
C14—C15—C20 | 117.62 (12) | C36—C35—H35A | 119.3 |
C17—C15—C16 | 108.69 (12) | C34—C35—H35A | 119.3 |
C14—C15—C16 | 104.15 (12) | C37—C36—C35 | 118.36 (19) |
C20—C15—C16 | 101.98 (12) | C37—C36—H36A | 120.8 |
N2—C16—C1 | 112.71 (13) | C35—C36—H36A | 120.8 |
N2—C16—C15 | 105.47 (12) | C38—C37—C36 | 122.46 (17) |
C1—C16—C15 | 119.60 (12) | C38—C37—F2 | 118.92 (19) |
N2—C16—C11 | 112.65 (12) | C36—C37—F2 | 118.6 (2) |
C1—C16—C11 | 103.30 (12) | C37—C38—C39 | 118.78 (18) |
C15—C16—C11 | 102.82 (12) | C37—C38—H38A | 120.6 |
O1—C17—C18 | 122.52 (13) | C39—C38—H38A | 120.6 |
O1—C17—C15 | 122.42 (14) | C38—C39—C34 | 121.21 (18) |
C18—C17—C15 | 115.02 (13) | C38—C39—H39A | 119.4 |
C21—C18—C17 | 116.22 (14) | C34—C39—H39A | 119.4 |
C10—C1—C2—C3 | −1.3 (2) | N1—C11—C16—N2 | −124.04 (13) |
C16—C1—C2—C3 | −176.77 (16) | C9—C11—C16—N2 | 113.09 (14) |
C1—C2—C3—C4 | 2.8 (3) | O2—C11—C16—C1 | −130.08 (13) |
C2—C3—C4—C5 | −0.7 (3) | N1—C11—C16—C1 | 114.06 (12) |
C3—C4—C5—C10 | −2.7 (3) | C9—C11—C16—C1 | −8.81 (14) |
C3—C4—C5—C6 | 174.06 (18) | O2—C11—C16—C15 | 104.87 (13) |
C10—C5—C6—C7 | −0.7 (3) | N1—C11—C16—C15 | −11.00 (14) |
C4—C5—C6—C7 | −177.53 (18) | C9—C11—C16—C15 | −133.86 (12) |
C5—C6—C7—C8 | −1.7 (3) | C14—C15—C17—O1 | −2.3 (2) |
C6—C7—C8—C9 | 1.6 (3) | C20—C15—C17—O1 | −135.86 (16) |
C7—C8—C9—C10 | 0.9 (2) | C16—C15—C17—O1 | 114.85 (17) |
C7—C8—C9—C11 | 176.86 (17) | C14—C15—C17—C18 | 179.67 (13) |
C8—C9—C10—C5 | −3.5 (2) | C20—C15—C17—C18 | 46.08 (17) |
C11—C9—C10—C5 | 179.68 (14) | C16—C15—C17—C18 | −63.21 (17) |
C8—C9—C10—C1 | 173.13 (14) | O1—C17—C18—C21 | −24.6 (2) |
C11—C9—C10—C1 | −3.69 (18) | C15—C17—C18—C21 | 153.42 (15) |
C6—C5—C10—C9 | 3.3 (2) | O1—C17—C18—C19 | 160.88 (15) |
C4—C5—C10—C9 | −179.46 (15) | C15—C17—C18—C19 | −21.1 (2) |
C6—C5—C10—C1 | −172.97 (15) | C20—N1—C19—C18 | −47.68 (17) |
C4—C5—C10—C1 | 4.2 (2) | C11—N1—C19—C18 | 66.45 (17) |
C2—C1—C10—C9 | −178.85 (14) | C21—C18—C19—N1 | −153.25 (16) |
C16—C1—C10—C9 | −2.45 (18) | C17—C18—C19—N1 | 20.7 (2) |
C2—C1—C10—C5 | −2.2 (2) | C11—N1—C20—C15 | −48.50 (13) |
C16—C1—C10—C5 | 174.19 (14) | C19—N1—C20—C15 | 74.05 (15) |
C20—N1—C11—O2 | −80.31 (13) | C17—C15—C20—N1 | −73.35 (14) |
C19—N1—C11—O2 | 162.36 (12) | C14—C15—C20—N1 | 153.74 (12) |
C20—N1—C11—C9 | 152.34 (13) | C16—C15—C20—N1 | 40.60 (14) |
C19—N1—C11—C9 | 35.01 (18) | C17—C18—C21—C22 | 179.54 (16) |
C20—N1—C11—C16 | 36.48 (13) | C19—C18—C21—C22 | −6.4 (3) |
C19—N1—C11—C16 | −80.86 (14) | C18—C21—C22—C27 | −40.3 (3) |
C8—C9—C11—O2 | −49.7 (2) | C18—C21—C22—C23 | 143.4 (2) |
C10—C9—C11—O2 | 126.53 (14) | C27—C22—C23—C24 | 0.8 (3) |
C8—C9—C11—N1 | 75.0 (2) | C21—C22—C23—C24 | 177.3 (2) |
C10—C9—C11—N1 | −108.77 (15) | C22—C23—C24—C25 | −0.9 (4) |
C8—C9—C11—C16 | −168.46 (17) | C23—C24—C25—F1 | −179.9 (2) |
C10—C9—C11—C16 | 7.80 (16) | C23—C24—C25—C26 | 0.4 (4) |
C16—N2—C13—C28 | 148.04 (13) | F1—C25—C26—C27 | −179.51 (18) |
C16—N2—C13—C14 | 22.51 (17) | C24—C25—C26—C27 | 0.2 (3) |
N2—C13—C14—C34 | −164.10 (13) | C25—C26—C27—C22 | −0.2 (3) |
C28—C13—C14—C34 | 70.80 (18) | C23—C22—C27—C26 | −0.3 (3) |
N2—C13—C14—C15 | −35.25 (16) | C21—C22—C27—C26 | −176.57 (16) |
C28—C13—C14—C15 | −160.35 (13) | N2—C13—C28—C33 | −69.3 (2) |
C34—C14—C15—C17 | −78.91 (17) | C14—C13—C28—C33 | 50.8 (2) |
C13—C14—C15—C17 | 154.11 (13) | N2—C13—C28—C29 | 113.44 (17) |
C34—C14—C15—C20 | 49.57 (18) | C14—C13—C28—C29 | −126.44 (16) |
C13—C14—C15—C20 | −77.41 (16) | C33—C28—C29—C30 | −1.9 (3) |
C34—C14—C15—C16 | 161.50 (12) | C13—C28—C29—C30 | 175.42 (17) |
C13—C14—C15—C16 | 34.52 (14) | C28—C29—C30—C31 | 0.3 (3) |
C13—N2—C16—C1 | −132.84 (14) | C29—C30—C31—C32 | 1.3 (3) |
C13—N2—C16—C15 | −0.66 (16) | C30—C31—C32—C33 | −1.2 (3) |
C13—N2—C16—C11 | 110.74 (14) | C29—C28—C33—C32 | 2.1 (3) |
C2—C1—C16—N2 | 60.9 (2) | C13—C28—C33—C32 | −175.23 (17) |
C10—C1—C16—N2 | −114.87 (14) | C31—C32—C33—C28 | −0.5 (3) |
C2—C1—C16—C15 | −63.9 (2) | C15—C14—C34—C35 | −85.00 (19) |
C10—C1—C16—C15 | 120.36 (14) | C13—C14—C34—C35 | 35.7 (2) |
C2—C1—C16—C11 | −177.22 (16) | C15—C14—C34—C39 | 98.43 (18) |
C10—C1—C16—C11 | 7.00 (15) | C13—C14—C34—C39 | −140.82 (16) |
C17—C15—C16—N2 | −146.38 (13) | C39—C34—C35—C36 | 1.1 (3) |
C14—C15—C16—N2 | −21.70 (15) | C14—C34—C35—C36 | −175.49 (16) |
C20—C15—C16—N2 | 101.13 (13) | C34—C35—C36—C37 | 0.7 (3) |
C17—C15—C16—C1 | −18.22 (19) | C35—C36—C37—C38 | −2.3 (3) |
C14—C15—C16—C1 | 106.46 (15) | C35—C36—C37—F2 | 176.64 (16) |
C20—C15—C16—C1 | −130.71 (14) | C36—C37—C38—C39 | 1.9 (3) |
C17—C15—C16—C11 | 95.40 (13) | F2—C37—C38—C39 | −177.05 (17) |
C14—C15—C16—C11 | −139.92 (11) | C37—C38—C39—C34 | 0.1 (3) |
C20—C15—C16—C11 | −17.09 (13) | C35—C34—C39—C38 | −1.6 (3) |
O2—C11—C16—N2 | −8.18 (18) | C14—C34—C39—C38 | 175.19 (16) |
Cg5, Cg6, Cg7 and Cg9 are the centroids of the C1–C5/C10, C5–C10, C22–C27 and C34–C39 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.90 (2) | 1.97 (2) | 2.636 (2) | 129.6 (17) |
C13—H13A···O2i | 0.98 | 2.53 | 3.499 (2) | 171 |
C20—H20B···O2i | 0.97 | 2.55 | 3.522 (2) | 179 |
C23—H23A···O1ii | 0.93 | 2.52 | 3.410 (2) | 162 |
C35—H35A···O2i | 0.93 | 2.46 | 3.383 (2) | 174 |
C30—H30A···Cg5iii | 0.93 | 2.94 | 3.836 (2) | 168 |
C31—H31A···Cg6iii | 0.93 | 2.91 | 3.609 (3) | 133 |
C38—H38A···Cg7iv | 0.93 | 2.92 | 3.836 (2) | 168 |
C7—H7A···Cg9v | 0.93 | 2.85 | 3.400 (3) | 119 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x, −y, −z+1; (iii) −x, −y, −z; (iv) x, y−1, z; (v) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C38H28F2N2O2 |
Mr | 582.62 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 9.3269 (3), 11.8635 (4), 14.2095 (4) |
α, β, γ (°) | 75.904 (2), 74.726 (2), 77.627 (2) |
V (Å3) | 1452.01 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.39 × 0.25 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.965, 0.987 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16981, 5915, 4221 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.115, 1.03 |
No. of reflections | 5915 |
No. of parameters | 405 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.17, −0.20 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg5, Cg6, Cg7 and Cg9 are the centroids of the C1–C5/C10, C5–C10, C22–C27 and C34–C39 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.90 (2) | 1.97 (2) | 2.636 (2) | 129.6 (17) |
C13—H13A···O2i | 0.98 | 2.53 | 3.499 (2) | 171 |
C20—H20B···O2i | 0.97 | 2.55 | 3.522 (2) | 179 |
C23—H23A···O1ii | 0.93 | 2.52 | 3.410 (2) | 162 |
C35—H35A···O2i | 0.93 | 2.46 | 3.383 (2) | 174 |
C30—H30A···Cg5iii | 0.93 | 2.94 | 3.836 (2) | 168 |
C31—H31A···Cg6iii | 0.93 | 2.91 | 3.609 (3) | 133 |
C38—H38A···Cg7iv | 0.93 | 2.92 | 3.836 (2) | 168 |
C7—H7A···Cg9v | 0.93 | 2.85 | 3.400 (3) | 119 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x, −y, −z+1; (iii) −x, −y, −z; (iv) x, y−1, z; (v) x, y+1, z. |
Acknowledgements
RSK, HO and ASA thank Universiti Sains Malaysia (USM) for support under the University Research Grant No. 203/PKIMIA/6711179 and the Ministry of Science, Technology and Innovation Grant No. 09-05-lfn-meb-004. RSK also thanks USM for the award of a post-doctoral fellowship. HKF and MH thank the Malaysian Government and USM for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks USM for a post-doctoral research fellowship.
References
Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
1,3-Dipolar cycloaddition provides a facile route for the synthesis of many dispiroheterocyclic systems through the cycloaddition reaction of azomethine ylides with the definite dipolarophiles (Suresh Kumar et al., 2011; Jayashankaran et al., 2005; Manian et al., 2006). This method is widely used as one of the key steps for the synthesis of natural products such as alkaloids and pharmacologically important compounds (Williams & Fegley, 1992). The significance of these heterocycles prompted us to investigate the crystal structure determination of the title compound and report the results in this paper.
The asymmetric unit of the title compound is shown in Fig. 1. The piperidine (N1/C15/C17–C20) ring adopts a chair conformation [Q = 0.6152 (17) Å; θ = 39.34 (16)° and ϕ = 298.6 (2)°; Cremer & Pople, 1975] and the pyrrolidine (N2/C13–C16) ring adopts an envelope conformation with the spiro C14 atom as the flap atom (displacement -0.230 (2) Å) and with puckering parameters, Q = 0.3614 (17) Å; and ϕ = 252.3 (3)°. The naphthalene (C1–C10) ring makes dihedral angles of 39.89 (8)°, 35.33 (8)° and 46.45 (8)° with the two fluoro-substituted (C22–C27)/(C34–C39) phenyl rings and the benzene (C28–C33) ring, repectively. The corresponding angle between the two fluoro-substituted phenyl (C22–C27)/(C34–C39) rings is 75.21 (10)°.
In the crystal, (Fig. 2), the molecules are connected via C—H···O (Table 1) hydrogen bonds forming one-dimensional supramolecular chains along the c-axis. Furthermore, the crystal structure is stabilized by weak C—H···π interactions involving the centroids of the Cg5 (C1–C5/C10); Cg6 (C5–C10); Cg7 (C22–C27) and Cg9 (C34–C39) rings.