organic compounds
1′-Methyl-4′-[4-(trifluoromethyl)phenyl]dispiro[indan-2,2′-pyrrolidine-3′,2′′-indan]-1,3,1′′-trione
aInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C28H20F3NO3, the pyrrolidine ring adopts a half-chair conformation. The other five-membered rings adopt envelope conformations with the spiro and methylene C atoms as the flap atoms. In the crystal, molecules are connected via weak C—H⋯O hydrogen bonds, forming sheets parallel to the bc plane.
Related literature
For a related structure and background references, see: Wei et al. (2011). For ring puckering parameters, see: Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811044527/hb6459sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811044527/hb6459Isup2.hkl
A mixture of (E)2-(4-trifluoromethylbenzylidene)-2,3-dihydro-1H- indene-1-one (0.001 mmol), ninhydrin (0.001 mmol) and sarcosine (0.002 mmol) (1:1:2) were dissolved in methanol (10 ml) and refluxed for 4 h. After completion of the reaction as evident from TLC, the mixture was poured into water. The precipitated solid was filtered, washed and recrystallised from petroleum ether-ethyl acetate mixture (1:1) to reveal the title compound as yellow blocks.
All hydrogen atoms were positioned geometrically [ C–H = 0.95–1.00 Å] and were refined using a riding model, with Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating group model was applied to the methyl groups.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C28H20F3NO3 | F(000) = 984 |
Mr = 475.45 | Dx = 1.423 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 3175 reflections |
a = 7.8070 (2) Å | θ = 2.4–29.0° |
b = 22.0878 (5) Å | µ = 0.11 mm−1 |
c = 13.1278 (3) Å | T = 100 K |
β = 101.420 (2)° | Block, yellow |
V = 2218.93 (9) Å3 | 0.27 × 0.15 × 0.13 mm |
Z = 4 |
Bruker SMART APEXII CCD diffractometer | 6530 independent reflections |
Radiation source: fine-focus sealed tube | 3872 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.077 |
ϕ and ω scans | θmax = 30.2°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −11→11 |
Tmin = 0.971, Tmax = 0.986 | k = −30→31 |
22102 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.070 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.162 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0624P)2 + 0.6034P] where P = (Fo2 + 2Fc2)/3 |
6530 reflections | (Δ/σ)max < 0.001 |
317 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.40 e Å−3 |
C28H20F3NO3 | V = 2218.93 (9) Å3 |
Mr = 475.45 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.8070 (2) Å | µ = 0.11 mm−1 |
b = 22.0878 (5) Å | T = 100 K |
c = 13.1278 (3) Å | 0.27 × 0.15 × 0.13 mm |
β = 101.420 (2)° |
Bruker SMART APEXII CCD diffractometer | 6530 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3872 reflections with I > 2σ(I) |
Tmin = 0.971, Tmax = 0.986 | Rint = 0.077 |
22102 measured reflections |
R[F2 > 2σ(F2)] = 0.070 | 0 restraints |
wR(F2) = 0.162 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.48 e Å−3 |
6530 reflections | Δρmin = −0.40 e Å−3 |
317 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 1.4957 (2) | −0.05331 (7) | 0.55766 (14) | 0.0444 (4) | |
F2 | 1.4706 (2) | −0.11963 (8) | 0.67246 (11) | 0.0414 (4) | |
F3 | 1.3006 (2) | −0.12198 (7) | 0.52402 (12) | 0.0404 (4) | |
O1 | 0.8027 (2) | 0.12100 (8) | 1.06182 (12) | 0.0259 (4) | |
O2 | 0.5579 (2) | 0.16217 (8) | 0.71690 (12) | 0.0283 (4) | |
O3 | 0.9907 (2) | 0.18882 (7) | 0.73016 (11) | 0.0249 (4) | |
N1 | 0.6695 (2) | 0.05913 (9) | 0.86261 (14) | 0.0208 (4) | |
C1 | 0.6883 (3) | 0.33200 (12) | 0.90164 (19) | 0.0264 (5) | |
H1A | 0.6643 | 0.3729 | 0.8813 | 0.032* | |
C2 | 0.6425 (3) | 0.28631 (11) | 0.82908 (18) | 0.0236 (5) | |
H2A | 0.5879 | 0.2952 | 0.7594 | 0.028* | |
C3 | 0.6793 (3) | 0.22679 (10) | 0.86166 (16) | 0.0200 (5) | |
C4 | 0.6483 (3) | 0.16958 (11) | 0.80161 (16) | 0.0207 (5) | |
C5 | 0.7496 (3) | 0.11868 (10) | 0.87093 (16) | 0.0172 (5) | |
C6 | 0.7754 (3) | 0.14805 (11) | 0.97970 (16) | 0.0195 (5) | |
C7 | 0.7564 (3) | 0.21422 (10) | 0.96488 (16) | 0.0194 (5) | |
C8 | 0.8017 (3) | 0.26022 (11) | 1.03752 (17) | 0.0228 (5) | |
H8A | 0.8534 | 0.2514 | 1.1077 | 0.027* | |
C9 | 0.7691 (3) | 0.31913 (11) | 1.00426 (18) | 0.0252 (5) | |
H9A | 0.8021 | 0.3515 | 1.0518 | 0.030* | |
C10 | 0.7002 (3) | 0.03124 (11) | 0.76618 (17) | 0.0227 (5) | |
H10A | 0.5973 | 0.0367 | 0.7093 | 0.027* | |
H10B | 0.7239 | −0.0126 | 0.7763 | 0.027* | |
C11 | 0.8606 (3) | 0.06418 (10) | 0.74080 (16) | 0.0183 (5) | |
H11A | 0.8158 | 0.0925 | 0.6822 | 0.022* | |
C12 | 0.9279 (3) | 0.10405 (10) | 0.83779 (15) | 0.0160 (4) | |
C13 | 1.0579 (3) | 0.07642 (10) | 0.93124 (16) | 0.0172 (5) | |
H13A | 0.9951 | 0.0585 | 0.9824 | 0.021* | |
H13B | 1.1316 | 0.0449 | 0.9078 | 0.021* | |
C14 | 1.1665 (3) | 0.13004 (10) | 0.97689 (16) | 0.0171 (5) | |
C15 | 1.2772 (3) | 0.13615 (11) | 1.07356 (16) | 0.0209 (5) | |
H15A | 1.2924 | 0.1037 | 1.1221 | 0.025* | |
C16 | 1.3649 (3) | 0.19073 (11) | 1.09748 (17) | 0.0235 (5) | |
H16A | 1.4384 | 0.1957 | 1.1638 | 0.028* | |
C17 | 1.3475 (3) | 0.23843 (11) | 1.02646 (17) | 0.0239 (5) | |
H17A | 1.4090 | 0.2752 | 1.0448 | 0.029* | |
C18 | 1.2409 (3) | 0.23229 (10) | 0.92931 (17) | 0.0210 (5) | |
H18A | 1.2293 | 0.2642 | 0.8798 | 0.025* | |
C19 | 1.1512 (3) | 0.17805 (10) | 0.90651 (16) | 0.0173 (5) | |
C20 | 1.0218 (3) | 0.16199 (10) | 0.81240 (16) | 0.0178 (5) | |
C21 | 0.9976 (3) | 0.02506 (10) | 0.70611 (16) | 0.0172 (5) | |
C22 | 1.0503 (3) | −0.03063 (10) | 0.75231 (16) | 0.0195 (5) | |
H22A | 0.9989 | −0.0449 | 0.8076 | 0.023* | |
C23 | 1.1761 (3) | −0.06544 (11) | 0.71882 (16) | 0.0200 (5) | |
H23A | 1.2106 | −0.1032 | 0.7510 | 0.024* | |
C24 | 1.2516 (3) | −0.04479 (10) | 0.63779 (16) | 0.0185 (5) | |
C25 | 1.2032 (3) | 0.01078 (10) | 0.59215 (16) | 0.0203 (5) | |
H25A | 1.2559 | 0.0252 | 0.5375 | 0.024* | |
C26 | 1.0776 (3) | 0.04543 (10) | 0.62653 (16) | 0.0194 (5) | |
H26A | 1.0456 | 0.0836 | 0.5953 | 0.023* | |
C27 | 1.3791 (3) | −0.08444 (11) | 0.59856 (17) | 0.0223 (5) | |
C28 | 0.4895 (3) | 0.05533 (12) | 0.8773 (2) | 0.0291 (6) | |
H28A | 0.4807 | 0.0739 | 0.9439 | 0.044* | |
H28B | 0.4542 | 0.0128 | 0.8771 | 0.044* | |
H28C | 0.4127 | 0.0768 | 0.8207 | 0.044* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0479 (11) | 0.0266 (9) | 0.0723 (12) | 0.0028 (7) | 0.0446 (9) | 0.0036 (8) |
F2 | 0.0411 (10) | 0.0529 (11) | 0.0326 (8) | 0.0268 (8) | 0.0128 (7) | 0.0114 (7) |
F3 | 0.0405 (10) | 0.0351 (9) | 0.0443 (9) | 0.0066 (7) | 0.0053 (7) | −0.0204 (7) |
O1 | 0.0308 (10) | 0.0292 (10) | 0.0189 (7) | 0.0075 (7) | 0.0077 (7) | 0.0047 (7) |
O2 | 0.0281 (10) | 0.0321 (10) | 0.0215 (8) | 0.0070 (8) | −0.0032 (7) | −0.0025 (7) |
O3 | 0.0298 (10) | 0.0234 (9) | 0.0200 (8) | −0.0010 (7) | 0.0013 (7) | 0.0043 (7) |
N1 | 0.0169 (10) | 0.0217 (11) | 0.0247 (9) | −0.0028 (8) | 0.0065 (8) | −0.0023 (8) |
C1 | 0.0215 (12) | 0.0231 (13) | 0.0346 (13) | 0.0046 (10) | 0.0054 (10) | 0.0021 (10) |
C2 | 0.0190 (12) | 0.0252 (13) | 0.0259 (11) | 0.0034 (10) | 0.0028 (9) | 0.0038 (10) |
C3 | 0.0174 (11) | 0.0214 (13) | 0.0212 (10) | 0.0023 (9) | 0.0036 (9) | 0.0008 (9) |
C4 | 0.0182 (11) | 0.0258 (13) | 0.0187 (10) | 0.0036 (9) | 0.0048 (8) | 0.0022 (9) |
C5 | 0.0163 (11) | 0.0180 (12) | 0.0178 (9) | 0.0022 (9) | 0.0043 (8) | −0.0002 (8) |
C6 | 0.0161 (11) | 0.0235 (13) | 0.0189 (10) | 0.0026 (9) | 0.0034 (8) | −0.0008 (9) |
C7 | 0.0155 (11) | 0.0212 (12) | 0.0216 (10) | 0.0029 (9) | 0.0040 (8) | −0.0007 (9) |
C8 | 0.0221 (12) | 0.0259 (13) | 0.0202 (10) | 0.0034 (10) | 0.0037 (9) | −0.0017 (9) |
C9 | 0.0226 (13) | 0.0212 (13) | 0.0312 (12) | −0.0011 (10) | 0.0035 (10) | −0.0072 (10) |
C10 | 0.0180 (12) | 0.0239 (13) | 0.0276 (11) | −0.0023 (9) | 0.0081 (9) | −0.0055 (10) |
C11 | 0.0182 (11) | 0.0186 (12) | 0.0177 (10) | 0.0003 (9) | 0.0024 (8) | −0.0012 (9) |
C12 | 0.0164 (11) | 0.0153 (11) | 0.0162 (9) | 0.0001 (8) | 0.0028 (8) | 0.0000 (8) |
C13 | 0.0145 (11) | 0.0178 (12) | 0.0190 (10) | 0.0018 (8) | 0.0023 (8) | 0.0013 (8) |
C14 | 0.0161 (11) | 0.0162 (12) | 0.0196 (10) | 0.0012 (9) | 0.0050 (8) | −0.0013 (8) |
C15 | 0.0186 (11) | 0.0235 (13) | 0.0201 (10) | 0.0020 (9) | 0.0025 (9) | 0.0027 (9) |
C16 | 0.0219 (12) | 0.0276 (14) | 0.0194 (10) | −0.0018 (10) | 0.0004 (9) | −0.0047 (9) |
C17 | 0.0232 (12) | 0.0212 (13) | 0.0280 (11) | −0.0037 (10) | 0.0064 (9) | −0.0049 (10) |
C18 | 0.0220 (12) | 0.0173 (12) | 0.0241 (11) | −0.0027 (9) | 0.0059 (9) | 0.0005 (9) |
C19 | 0.0178 (11) | 0.0163 (12) | 0.0182 (10) | 0.0007 (8) | 0.0049 (8) | −0.0009 (8) |
C20 | 0.0171 (11) | 0.0188 (12) | 0.0172 (10) | 0.0022 (9) | 0.0031 (8) | −0.0002 (8) |
C21 | 0.0168 (11) | 0.0176 (12) | 0.0169 (9) | −0.0030 (8) | 0.0022 (8) | −0.0033 (8) |
C22 | 0.0226 (12) | 0.0181 (12) | 0.0193 (10) | −0.0017 (9) | 0.0078 (9) | −0.0001 (9) |
C23 | 0.0248 (12) | 0.0160 (12) | 0.0195 (10) | 0.0011 (9) | 0.0051 (9) | 0.0006 (8) |
C24 | 0.0184 (11) | 0.0188 (12) | 0.0185 (10) | −0.0017 (9) | 0.0041 (8) | −0.0019 (9) |
C25 | 0.0229 (12) | 0.0211 (12) | 0.0180 (10) | −0.0020 (9) | 0.0064 (9) | 0.0022 (9) |
C26 | 0.0220 (12) | 0.0164 (12) | 0.0195 (10) | 0.0017 (9) | 0.0034 (9) | 0.0014 (8) |
C27 | 0.0259 (13) | 0.0201 (13) | 0.0221 (10) | −0.0006 (10) | 0.0077 (9) | 0.0014 (9) |
C28 | 0.0203 (13) | 0.0342 (15) | 0.0344 (13) | −0.0006 (11) | 0.0092 (10) | −0.0032 (11) |
F1—C27 | 1.336 (3) | C12—C20 | 1.544 (3) |
F2—C27 | 1.335 (3) | C12—C13 | 1.554 (3) |
F3—C27 | 1.335 (3) | C13—C14 | 1.510 (3) |
O1—C6 | 1.214 (3) | C13—H13A | 0.9900 |
O2—C4 | 1.204 (2) | C13—H13B | 0.9900 |
O3—C20 | 1.213 (2) | C14—C15 | 1.393 (3) |
N1—C5 | 1.451 (3) | C14—C19 | 1.396 (3) |
N1—C28 | 1.458 (3) | C15—C16 | 1.391 (3) |
N1—C10 | 1.470 (3) | C15—H15A | 0.9500 |
C1—C2 | 1.385 (3) | C16—C17 | 1.396 (3) |
C1—C9 | 1.399 (3) | C16—H16A | 0.9500 |
C1—H1A | 0.9500 | C17—C18 | 1.385 (3) |
C2—C3 | 1.395 (3) | C17—H17A | 0.9500 |
C2—H2A | 0.9500 | C18—C19 | 1.390 (3) |
C3—C7 | 1.397 (3) | C18—H18A | 0.9500 |
C3—C4 | 1.484 (3) | C19—C20 | 1.476 (3) |
C4—C5 | 1.560 (3) | C21—C26 | 1.393 (3) |
C5—C6 | 1.545 (3) | C21—C22 | 1.397 (3) |
C5—C12 | 1.572 (3) | C22—C23 | 1.386 (3) |
C6—C7 | 1.478 (3) | C22—H22A | 0.9500 |
C7—C8 | 1.390 (3) | C23—C24 | 1.391 (3) |
C8—C9 | 1.380 (3) | C23—H23A | 0.9500 |
C8—H8A | 0.9500 | C24—C25 | 1.385 (3) |
C9—H9A | 0.9500 | C24—C27 | 1.492 (3) |
C10—C11 | 1.541 (3) | C25—C26 | 1.388 (3) |
C10—H10A | 0.9900 | C25—H25A | 0.9500 |
C10—H10B | 0.9900 | C26—H26A | 0.9500 |
C11—C21 | 1.513 (3) | C28—H28A | 0.9800 |
C11—C12 | 1.552 (3) | C28—H28B | 0.9800 |
C11—H11A | 1.0000 | C28—H28C | 0.9800 |
C5—N1—C28 | 117.03 (19) | C14—C13—H13B | 111.1 |
C5—N1—C10 | 107.67 (18) | C12—C13—H13B | 111.1 |
C28—N1—C10 | 114.55 (18) | H13A—C13—H13B | 109.0 |
C2—C1—C9 | 121.3 (2) | C15—C14—C19 | 119.1 (2) |
C2—C1—H1A | 119.3 | C15—C14—C13 | 129.5 (2) |
C9—C1—H1A | 119.3 | C19—C14—C13 | 111.44 (17) |
C1—C2—C3 | 117.8 (2) | C16—C15—C14 | 118.6 (2) |
C1—C2—H2A | 121.1 | C16—C15—H15A | 120.7 |
C3—C2—H2A | 121.1 | C14—C15—H15A | 120.7 |
C2—C3—C7 | 120.5 (2) | C15—C16—C17 | 121.7 (2) |
C2—C3—C4 | 129.64 (19) | C15—C16—H16A | 119.2 |
C7—C3—C4 | 109.86 (19) | C17—C16—H16A | 119.2 |
O2—C4—C3 | 127.6 (2) | C18—C17—C16 | 120.2 (2) |
O2—C4—C5 | 125.3 (2) | C18—C17—H17A | 119.9 |
C3—C4—C5 | 107.07 (17) | C16—C17—H17A | 119.9 |
N1—C5—C6 | 115.19 (18) | C17—C18—C19 | 117.9 (2) |
N1—C5—C4 | 116.63 (18) | C17—C18—H18A | 121.1 |
C6—C5—C4 | 101.22 (17) | C19—C18—H18A | 121.1 |
N1—C5—C12 | 100.66 (17) | C18—C19—C14 | 122.61 (19) |
C6—C5—C12 | 112.44 (17) | C18—C19—C20 | 128.3 (2) |
C4—C5—C12 | 111.17 (17) | C14—C19—C20 | 109.03 (19) |
O1—C6—C7 | 126.8 (2) | O3—C20—C19 | 127.6 (2) |
O1—C6—C5 | 125.6 (2) | O3—C20—C12 | 125.24 (19) |
C7—C6—C5 | 107.60 (17) | C19—C20—C12 | 107.10 (17) |
C8—C7—C3 | 121.5 (2) | C26—C21—C22 | 118.2 (2) |
C8—C7—C6 | 128.83 (19) | C26—C21—C11 | 119.3 (2) |
C3—C7—C6 | 109.68 (19) | C22—C21—C11 | 122.5 (2) |
C9—C8—C7 | 117.8 (2) | C23—C22—C21 | 121.1 (2) |
C9—C8—H8A | 121.1 | C23—C22—H22A | 119.4 |
C7—C8—H8A | 121.1 | C21—C22—H22A | 119.4 |
C8—C9—C1 | 121.1 (2) | C22—C23—C24 | 119.7 (2) |
C8—C9—H9A | 119.5 | C22—C23—H23A | 120.2 |
C1—C9—H9A | 119.5 | C24—C23—H23A | 120.2 |
N1—C10—C11 | 105.46 (18) | C25—C24—C23 | 120.1 (2) |
N1—C10—H10A | 110.6 | C25—C24—C27 | 121.0 (2) |
C11—C10—H10A | 110.6 | C23—C24—C27 | 119.0 (2) |
N1—C10—H10B | 110.6 | C24—C25—C26 | 119.9 (2) |
C11—C10—H10B | 110.6 | C24—C25—H25A | 120.1 |
H10A—C10—H10B | 108.8 | C26—C25—H25A | 120.1 |
C21—C11—C10 | 116.65 (19) | C25—C26—C21 | 121.1 (2) |
C21—C11—C12 | 115.24 (17) | C25—C26—H26A | 119.5 |
C10—C11—C12 | 104.37 (17) | C21—C26—H26A | 119.5 |
C21—C11—H11A | 106.6 | F2—C27—F3 | 105.84 (19) |
C10—C11—H11A | 106.6 | F2—C27—F1 | 106.4 (2) |
C12—C11—H11A | 106.6 | F3—C27—F1 | 106.00 (19) |
C20—C12—C11 | 113.04 (17) | F2—C27—C24 | 112.87 (18) |
C20—C12—C13 | 103.42 (16) | F3—C27—C24 | 112.13 (19) |
C11—C12—C13 | 119.14 (18) | F1—C27—C24 | 113.0 (2) |
C20—C12—C5 | 111.96 (18) | N1—C28—H28A | 109.5 |
C11—C12—C5 | 99.75 (16) | N1—C28—H28B | 109.5 |
C13—C12—C5 | 109.75 (17) | H28A—C28—H28B | 109.5 |
C14—C13—C12 | 103.47 (17) | N1—C28—H28C | 109.5 |
C14—C13—H13A | 111.1 | H28A—C28—H28C | 109.5 |
C12—C13—H13A | 111.1 | H28B—C28—H28C | 109.5 |
C9—C1—C2—C3 | 0.2 (4) | C6—C5—C12—C11 | 168.65 (18) |
C1—C2—C3—C7 | 1.3 (4) | C4—C5—C12—C11 | −78.7 (2) |
C1—C2—C3—C4 | −178.9 (2) | N1—C5—C12—C13 | −80.37 (19) |
C2—C3—C4—O2 | −14.0 (4) | C6—C5—C12—C13 | 42.7 (2) |
C7—C3—C4—O2 | 165.8 (2) | C4—C5—C12—C13 | 155.43 (17) |
C2—C3—C4—C5 | 168.4 (2) | C20—C12—C13—C14 | 22.8 (2) |
C7—C3—C4—C5 | −11.9 (3) | C11—C12—C13—C14 | 149.22 (19) |
C28—N1—C5—C6 | 65.2 (2) | C5—C12—C13—C14 | −96.8 (2) |
C10—N1—C5—C6 | −164.16 (18) | C12—C13—C14—C15 | 164.5 (2) |
C28—N1—C5—C4 | −53.3 (3) | C12—C13—C14—C19 | −17.6 (2) |
C10—N1—C5—C4 | 77.4 (2) | C19—C14—C15—C16 | 1.8 (3) |
C28—N1—C5—C12 | −173.66 (17) | C13—C14—C15—C16 | 179.6 (2) |
C10—N1—C5—C12 | −43.0 (2) | C14—C15—C16—C17 | −1.5 (4) |
O2—C4—C5—N1 | −32.4 (3) | C15—C16—C17—C18 | 0.1 (4) |
C3—C4—C5—N1 | 145.4 (2) | C16—C17—C18—C19 | 1.0 (4) |
O2—C4—C5—C6 | −158.2 (2) | C17—C18—C19—C14 | −0.7 (4) |
C3—C4—C5—C6 | 19.6 (2) | C17—C18—C19—C20 | 175.5 (2) |
O2—C4—C5—C12 | 82.2 (3) | C15—C14—C19—C18 | −0.7 (3) |
C3—C4—C5—C12 | −100.1 (2) | C13—C14—C19—C18 | −178.9 (2) |
N1—C5—C6—O1 | 31.2 (3) | C15—C14—C19—C20 | −177.5 (2) |
C4—C5—C6—O1 | 158.0 (2) | C13—C14—C19—C20 | 4.3 (3) |
C12—C5—C6—O1 | −83.3 (3) | C18—C19—C20—O3 | 13.6 (4) |
N1—C5—C6—C7 | −147.48 (19) | C14—C19—C20—O3 | −169.8 (2) |
C4—C5—C6—C7 | −20.7 (2) | C18—C19—C20—C12 | −165.5 (2) |
C12—C5—C6—C7 | 98.0 (2) | C14—C19—C20—C12 | 11.1 (2) |
C2—C3—C7—C8 | −1.2 (4) | C11—C12—C20—O3 | 29.4 (3) |
C4—C3—C7—C8 | 179.0 (2) | C13—C12—C20—O3 | 159.7 (2) |
C2—C3—C7—C6 | 178.0 (2) | C5—C12—C20—O3 | −82.3 (3) |
C4—C3—C7—C6 | −1.9 (3) | C11—C12—C20—C19 | −151.44 (18) |
O1—C6—C7—C8 | 15.4 (4) | C13—C12—C20—C19 | −21.2 (2) |
C5—C6—C7—C8 | −165.9 (2) | C5—C12—C20—C19 | 96.9 (2) |
O1—C6—C7—C3 | −163.7 (2) | C10—C11—C21—C26 | 140.2 (2) |
C5—C6—C7—C3 | 15.0 (2) | C12—C11—C21—C26 | −96.9 (2) |
C3—C7—C8—C9 | −0.4 (4) | C10—C11—C21—C22 | −41.1 (3) |
C6—C7—C8—C9 | −179.4 (2) | C12—C11—C21—C22 | 81.9 (3) |
C7—C8—C9—C1 | 1.9 (4) | C26—C21—C22—C23 | −1.3 (3) |
C2—C1—C9—C8 | −1.8 (4) | C11—C21—C22—C23 | −180.0 (2) |
C5—N1—C10—C11 | 22.4 (2) | C21—C22—C23—C24 | 0.0 (3) |
C28—N1—C10—C11 | 154.43 (19) | C22—C23—C24—C25 | 1.1 (3) |
N1—C10—C11—C21 | 136.47 (19) | C22—C23—C24—C27 | −176.4 (2) |
N1—C10—C11—C12 | 8.1 (2) | C23—C24—C25—C26 | −0.9 (3) |
C21—C11—C12—C20 | 79.4 (2) | C27—C24—C25—C26 | 176.6 (2) |
C10—C11—C12—C20 | −151.33 (18) | C24—C25—C26—C21 | −0.5 (3) |
C21—C11—C12—C13 | −42.3 (3) | C22—C21—C26—C25 | 1.5 (3) |
C10—C11—C12—C13 | 86.9 (2) | C11—C21—C26—C25 | −179.70 (19) |
C21—C11—C12—C5 | −161.54 (18) | C25—C24—C27—F2 | 151.1 (2) |
C10—C11—C12—C5 | −32.3 (2) | C23—C24—C27—F2 | −31.4 (3) |
N1—C5—C12—C20 | 165.38 (16) | C25—C24—C27—F3 | −89.5 (3) |
C6—C5—C12—C20 | −71.5 (2) | C23—C24—C27—F3 | 88.0 (2) |
C4—C5—C12—C20 | 41.2 (2) | C25—C24—C27—F1 | 30.2 (3) |
N1—C5—C12—C11 | 45.54 (19) | C23—C24—C27—F1 | −152.2 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17A···O3i | 0.95 | 2.52 | 3.130 (3) | 122 |
C23—H23A···O1ii | 0.95 | 2.51 | 3.104 (3) | 121 |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (ii) −x+2, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C28H20F3NO3 |
Mr | 475.45 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 7.8070 (2), 22.0878 (5), 13.1278 (3) |
β (°) | 101.420 (2) |
V (Å3) | 2218.93 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.27 × 0.15 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.971, 0.986 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 22102, 6530, 3872 |
Rint | 0.077 |
(sin θ/λ)max (Å−1) | 0.708 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.070, 0.162, 1.04 |
No. of reflections | 6530 |
No. of parameters | 317 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.48, −0.40 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17A···O3i | 0.95 | 2.52 | 3.130 (3) | 122 |
C23—H23A···O1ii | 0.95 | 2.51 | 3.104 (3) | 121 |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (ii) −x+2, −y, −z+2. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
ACW, MAA and TSC thank the Pharmacogenetic and Novel Therapeutic Research, Institute for Research in Molecular Medicine, Universiti of Sains Malaysia, Penang. This work was funded through Research Grant No. RUC (1001/PSK/8620012). HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160. MH also thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
References
Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107. CrossRef CAS Web of Science IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wei, A. C., Ali, M. A., Ismail, R., Hemamalini, M. & Fun, H. K. (2011). Acta Cryst. E67, o3124. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As part of our ongoing search for novel heterocyclic compounds with antitubercular activity (Wei et al., 2011), our group has synthesized the title compound as described below.
The asymmetric unit of the title compound is shown in Fig. 1. The pyrrolidine ring (N1/C5/C10–C12) is twisted about the C5 and C12 bonds, with puckering parameters (Cremer & Pople, 1975) Q = 0.457 (2) Å and f = 46.8 (3)°, and adopting a half-chair conformation. The two five- membered carbocyclic rings, C3–C7 and C12–C14/C19,C20, are in envelope conformations: puckering parameters Q = 0.213 (2) Å and f = 76.2 (7)° with atom C5 at the flap; and Q = 0.234 (2) Å and f = 189.1 (6)° with atom C13 at the flap, respectively. The indane (C1–C9) ring is essentially planar [maximum deviation of 0.208 (2) Å for atom C5] and forms dihedral angles of 28.51 (10)° and 61.94 (9) ° with the terminal phenyl (C14–C19/C21–C26) rings.
In the crystal (Fig. 2), the molecules are connected via weak intermolecular C—H···O (Table 1) hydrogen bonds, forming two- dimensional networks parallel to the bc-plane.