organic compounds
(E)-N′-{7-Methoxyspiro[chromeno[4,3-d]thiazole-4,1′-cyclohexan]-2-yl}-N,N-dimethylacetimidamide
aX-ray Crystallography Laboratory, Post-Graduate Department of Physics, University of Jammu, Jammu Tawi 180 006, India, bPhysics Department, Saurashtra University, Rajkot 360 005, India, and cShri M. N. Virani Science College, Rajkot 360 005, India
*Correspondence e-mail: rkvk.paper11@gmail.com
In the chromenothiazole ring system of the title molecule, C20H25N3O2S, the pyran ring is in a half-chair conformation. The dihedral angle between the thiazole and benzene rings is 14.78 (6)°. The cyclohexane ring is in a chair conformation. The is stabilized by weak intermolecular C—H⋯N and C—H⋯O hydrogen bonds.
Related literature
For the biological activity of et al. (1997); Cruz et al. (1995); Chitamber & Wereley (1997). For the biological activity of thiazoles, see: Pawar et al. (2009). and acetamidine play an important role in many biological processes and are of great importance for the preparation of various pharmaceuticals, see: More et al. (2001); Sutariya et al. (2007); Murza et al. (1999); Dong et al. (2006); Jayashree et al. (2005); Modi et al. (1971); Vicini et al. (2003). For standard bond-length data, see: Allen et al. (1987). For ring conformations, see: Duax & Norton (1975).
containing nitrogen and sulfur, see: BishayeeExperimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009) and PARST (Nardelli, 1995).
Supporting information
10.1107/S1600536811040359/lh5340sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811040359/lh5340Isup2.hkl
An ice cold solution of phosphorus oxychloride (0.85 mmol) in dry toluene(20 ml) was added to the suitable amount of acetamide (0.47 mmol), and the mixture was stirred for 30 min at room temperature. At the end of the reaction, 7-methoxyspiro[4,3-d][1,3]thiazole-4,1-cyclohexan]-2-amine (0.42 mmol) dissolved in dry toluene was added drop wise and the reaction mixture was refluxed for 6 h. The solution was then cooled, carefully poured into the ice-water, and made alkaline with 1 N NaOH solution. The organic layer was extracted with CHCl3, washed to neutrality with water, dried over sodium sulfate, filtered and then evaporated in vacuo. The crude material was purified by
on silica gel eluting with a hexane/ethyl acetate(7:3) mixture. Single crystals suitable for X-ray measurements were obtained by crystallization from CHCl3 at room temperature.All H atoms (except methyl H atoms) were located in a difference Fourier map and refined freely. Methyl H atoms were positioned geometrically and refined using a riding model with C—H = 0.96 Å. The Uiso(H) values were constrained to be 1.5Ueq(C methyl).
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009) and PARST (Nardelli, 1995).C20H25N3O2S | F(000) = 792 |
Mr = 371.49 | Dx = 1.241 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 24440 reflections |
a = 9.2510 (2) Å | θ = 3.5–29.0° |
b = 20.0273 (4) Å | µ = 0.18 mm−1 |
c = 10.7301 (2) Å | T = 293 K |
β = 90.840 (2)° | Plate, light-brown |
V = 1987.78 (7) Å3 | 0.3 × 0.2 × 0.1 mm |
Z = 4 |
Oxford Diffraction Xcalibur Sapphire3 diffractometer | 3482 independent reflections |
Radiation source: fine-focus sealed tube | 2835 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.041 |
Detector resolution: 16.1049 pixels mm-1 | θmax = 25.0°, θmin = 3.5° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | k = −23→23 |
Tmin = 0.892, Tmax = 1.000 | l = −12→12 |
56290 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0521P)2 + 0.884P] where P = (Fo2 + 2Fc2)/3 |
3482 reflections | (Δ/σ)max = 0.001 |
291 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C20H25N3O2S | V = 1987.78 (7) Å3 |
Mr = 371.49 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.2510 (2) Å | µ = 0.18 mm−1 |
b = 20.0273 (4) Å | T = 293 K |
c = 10.7301 (2) Å | 0.3 × 0.2 × 0.1 mm |
β = 90.840 (2)° |
Oxford Diffraction Xcalibur Sapphire3 diffractometer | 3482 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | 2835 reflections with I > 2σ(I) |
Tmin = 0.892, Tmax = 1.000 | Rint = 0.041 |
56290 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.18 e Å−3 |
3482 reflections | Δρmin = −0.19 e Å−3 |
291 parameters |
Experimental. CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.34.40 (release 27–08-2010 CrysAlis171. NET) (compiled Aug 27 2010,11:50:40) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.33437 (18) | 0.18039 (8) | 0.41748 (15) | 0.0474 (4) | |
C2 | 0.2587 (2) | 0.12626 (10) | 0.39594 (19) | 0.0467 (5) | |
C3A | 0.4732 (2) | 0.12918 (9) | 0.26463 (18) | 0.0428 (5) | |
S3 | 0.33236 (6) | 0.07336 (3) | 0.28200 (5) | 0.05248 (19) | |
C4 | 0.6032 (2) | 0.12315 (9) | 0.18332 (17) | 0.0410 (4) | |
O5 | 0.64694 (14) | 0.19099 (6) | 0.14928 (11) | 0.0428 (3) | |
C5A | 0.65071 (19) | 0.23902 (8) | 0.24074 (16) | 0.0368 (4) | |
C6 | 0.7445 (2) | 0.29214 (9) | 0.22330 (18) | 0.0395 (4) | |
C7 | 0.7481 (2) | 0.34279 (9) | 0.3113 (2) | 0.0459 (5) | |
C8 | 0.6590 (3) | 0.34051 (11) | 0.4146 (2) | 0.0551 (6) | |
C9 | 0.5632 (3) | 0.28851 (11) | 0.4276 (2) | 0.0539 (5) | |
C9A | 0.5568 (2) | 0.23671 (9) | 0.34111 (17) | 0.0419 (4) | |
C9B | 0.4543 (2) | 0.18148 (9) | 0.34258 (17) | 0.0421 (4) | |
O10 | 0.83754 (17) | 0.39732 (7) | 0.30446 (15) | 0.0619 (4) | |
C11 | 0.9325 (3) | 0.40072 (13) | 0.2026 (3) | 0.0766 (8) | |
H11A | 0.9927 | 0.3617 | 0.2020 | 0.115* | |
H11B | 0.9919 | 0.4398 | 0.2104 | 0.115* | |
H11C | 0.8772 | 0.4029 | 0.1262 | 0.115* | |
C12 | 0.5715 (3) | 0.08891 (13) | 0.0596 (2) | 0.0562 (6) | |
C13 | 0.7053 (3) | 0.08381 (14) | −0.0209 (3) | 0.0693 (7) | |
C14 | 0.8293 (3) | 0.05035 (14) | 0.0475 (3) | 0.0818 (9) | |
C15 | 0.8642 (3) | 0.08530 (14) | 0.1699 (3) | 0.0693 (7) | |
C16 | 0.7304 (2) | 0.08994 (12) | 0.2511 (2) | 0.0535 (5) | |
N17 | 0.13926 (19) | 0.10532 (9) | 0.45830 (17) | 0.0537 (5) | |
C18 | 0.0370 (2) | 0.14748 (11) | 0.4842 (2) | 0.0501 (5) | |
C19 | 0.0168 (3) | 0.21331 (12) | 0.4193 (2) | 0.0657 (6) | |
H19A | 0.0794 | 0.2155 | 0.3489 | 0.099* | |
H19B | 0.0400 | 0.2489 | 0.4761 | 0.099* | |
H19C | −0.0818 | 0.2176 | 0.3915 | 0.099* | |
N20 | −0.06057 (19) | 0.12955 (11) | 0.56983 (19) | 0.0650 (5) | |
C21 | −0.1802 (3) | 0.17228 (18) | 0.6067 (3) | 0.0986 (11) | |
H21A | −0.1614 | 0.2174 | 0.5812 | 0.148* | |
H21B | −0.1900 | 0.1707 | 0.6956 | 0.148* | |
H21C | −0.2680 | 0.1569 | 0.5675 | 0.148* | |
C22 | −0.0438 (4) | 0.06674 (15) | 0.6362 (3) | 0.0923 (10) | |
H22A | −0.1023 | 0.0331 | 0.5963 | 0.139* | |
H22B | −0.0739 | 0.0723 | 0.7208 | 0.139* | |
H22C | 0.0558 | 0.0533 | 0.6352 | 0.139* | |
H61 | 0.803 (2) | 0.2918 (9) | 0.1512 (18) | 0.044 (5)* | |
H81 | 0.664 (2) | 0.3751 (11) | 0.477 (2) | 0.058 (6)* | |
H91 | 0.499 (3) | 0.2877 (11) | 0.494 (2) | 0.064 (7)* | |
H161 | 0.698 (2) | 0.0457 (12) | 0.275 (2) | 0.061 (6)* | |
H162 | 0.752 (2) | 0.1132 (11) | 0.328 (2) | 0.058 (6)* | |
H121 | 0.537 (2) | 0.0441 (12) | 0.079 (2) | 0.061 (6)* | |
H122 | 0.493 (3) | 0.1108 (13) | 0.017 (2) | 0.076 (8)* | |
H131 | 0.679 (3) | 0.0603 (13) | −0.093 (3) | 0.076 (8)* | |
H132 | 0.734 (3) | 0.1291 (13) | −0.046 (2) | 0.063 (7)* | |
H141 | 0.913 (3) | 0.0497 (14) | −0.006 (3) | 0.092 (9)* | |
H142 | 0.801 (3) | 0.0054 (16) | 0.064 (3) | 0.093 (9)* | |
H151 | 0.942 (3) | 0.0618 (14) | 0.216 (3) | 0.092 (9)* | |
H152 | 0.897 (3) | 0.1321 (13) | 0.153 (2) | 0.068 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0512 (10) | 0.0403 (9) | 0.0512 (10) | −0.0060 (8) | 0.0149 (8) | −0.0058 (7) |
C2 | 0.0484 (11) | 0.0394 (11) | 0.0525 (12) | −0.0010 (9) | 0.0098 (9) | −0.0008 (9) |
C3A | 0.0480 (11) | 0.0324 (10) | 0.0482 (11) | −0.0054 (8) | 0.0072 (9) | −0.0044 (8) |
S3 | 0.0512 (3) | 0.0383 (3) | 0.0684 (4) | −0.0089 (2) | 0.0148 (3) | −0.0121 (2) |
C4 | 0.0488 (11) | 0.0285 (9) | 0.0460 (11) | −0.0059 (8) | 0.0086 (8) | −0.0056 (8) |
O5 | 0.0580 (8) | 0.0311 (7) | 0.0395 (7) | −0.0040 (6) | 0.0085 (6) | −0.0047 (5) |
C5A | 0.0429 (10) | 0.0281 (9) | 0.0393 (10) | 0.0018 (7) | 0.0003 (8) | −0.0033 (7) |
C6 | 0.0408 (10) | 0.0331 (10) | 0.0446 (11) | 0.0024 (8) | 0.0035 (8) | 0.0001 (8) |
C7 | 0.0455 (11) | 0.0329 (10) | 0.0592 (12) | −0.0027 (8) | −0.0015 (9) | −0.0045 (9) |
C8 | 0.0649 (14) | 0.0389 (11) | 0.0617 (13) | −0.0051 (10) | 0.0081 (11) | −0.0193 (10) |
C9 | 0.0628 (14) | 0.0459 (12) | 0.0534 (12) | −0.0069 (10) | 0.0144 (11) | −0.0144 (10) |
C9A | 0.0479 (11) | 0.0340 (10) | 0.0438 (10) | −0.0021 (8) | 0.0053 (8) | −0.0050 (8) |
C9B | 0.0475 (11) | 0.0362 (10) | 0.0428 (10) | −0.0028 (8) | 0.0075 (8) | −0.0027 (8) |
O10 | 0.0637 (10) | 0.0431 (8) | 0.0791 (11) | −0.0182 (7) | 0.0083 (8) | −0.0145 (7) |
C11 | 0.0684 (16) | 0.0602 (15) | 0.102 (2) | −0.0289 (13) | 0.0216 (15) | −0.0149 (14) |
C12 | 0.0602 (14) | 0.0509 (14) | 0.0579 (13) | −0.0119 (11) | 0.0102 (11) | −0.0201 (11) |
C13 | 0.0826 (18) | 0.0614 (16) | 0.0645 (16) | −0.0119 (14) | 0.0242 (14) | −0.0268 (13) |
C14 | 0.0795 (19) | 0.0494 (15) | 0.118 (3) | 0.0057 (14) | 0.0509 (19) | −0.0093 (15) |
C15 | 0.0494 (14) | 0.0596 (16) | 0.099 (2) | 0.0071 (12) | 0.0135 (13) | 0.0161 (15) |
C16 | 0.0531 (13) | 0.0411 (12) | 0.0665 (15) | −0.0008 (10) | 0.0051 (11) | 0.0067 (11) |
N17 | 0.0493 (10) | 0.0446 (10) | 0.0677 (11) | −0.0064 (8) | 0.0177 (9) | −0.0025 (9) |
C18 | 0.0402 (11) | 0.0526 (12) | 0.0575 (12) | −0.0095 (9) | 0.0004 (9) | −0.0127 (10) |
C19 | 0.0538 (13) | 0.0627 (15) | 0.0801 (16) | 0.0048 (11) | −0.0125 (12) | −0.0052 (13) |
N20 | 0.0440 (10) | 0.0762 (14) | 0.0753 (13) | −0.0106 (9) | 0.0150 (9) | −0.0155 (11) |
C21 | 0.0528 (16) | 0.137 (3) | 0.106 (2) | 0.0069 (17) | 0.0207 (15) | −0.033 (2) |
C22 | 0.092 (2) | 0.086 (2) | 0.100 (2) | −0.0273 (17) | 0.0405 (18) | 0.0049 (17) |
N1—C2 | 1.309 (3) | C12—H121 | 0.97 (2) |
N1—C9B | 1.380 (2) | C12—H122 | 0.96 (3) |
C2—N17 | 1.366 (2) | C13—C14 | 1.510 (4) |
C2—S3 | 1.762 (2) | C13—H131 | 0.94 (3) |
C3A—C9B | 1.353 (3) | C13—H132 | 0.98 (2) |
C3A—C4 | 1.501 (3) | C14—C15 | 1.519 (4) |
C3A—S3 | 1.7292 (19) | C14—H141 | 0.97 (3) |
C4—O5 | 1.465 (2) | C14—H142 | 0.95 (3) |
C4—C12 | 1.519 (3) | C15—C16 | 1.527 (3) |
C4—C16 | 1.526 (3) | C15—H151 | 0.98 (3) |
O5—C5A | 1.374 (2) | C15—H152 | 1.00 (3) |
C5A—C6 | 1.387 (3) | C16—H161 | 0.97 (2) |
C5A—C9A | 1.394 (3) | C16—H162 | 0.97 (2) |
C6—C7 | 1.386 (3) | N17—C18 | 1.301 (3) |
C6—H61 | 0.95 (2) | C18—N20 | 1.346 (3) |
C7—O10 | 1.373 (2) | C18—C19 | 1.501 (3) |
C7—C8 | 1.391 (3) | C19—H19A | 0.9600 |
C8—C9 | 1.376 (3) | C19—H19B | 0.9600 |
C8—H81 | 0.96 (2) | C19—H19C | 0.9600 |
C9—C9A | 1.393 (3) | N20—C22 | 1.452 (4) |
C9—H91 | 0.94 (2) | N20—C21 | 1.458 (3) |
C9A—C9B | 1.457 (3) | C21—H21A | 0.9600 |
O10—C11 | 1.414 (3) | C21—H21B | 0.9600 |
C11—H11A | 0.9600 | C21—H21C | 0.9600 |
C11—H11B | 0.9600 | C22—H22A | 0.9600 |
C11—H11C | 0.9600 | C22—H22B | 0.9600 |
C12—C13 | 1.523 (3) | C22—H22C | 0.9600 |
C2—N1—C9B | 110.04 (16) | C14—C13—C12 | 111.8 (2) |
N1—C2—N17 | 127.00 (18) | C14—C13—H131 | 111.6 (16) |
N1—C2—S3 | 114.16 (14) | C12—C13—H131 | 107.3 (16) |
N17—C2—S3 | 118.62 (15) | C14—C13—H132 | 109.5 (14) |
C9B—C3A—C4 | 122.24 (17) | C12—C13—H132 | 108.6 (14) |
C9B—C3A—S3 | 109.23 (14) | H131—C13—H132 | 108 (2) |
C4—C3A—S3 | 128.48 (14) | C13—C14—C15 | 111.5 (2) |
C3A—S3—C2 | 89.18 (9) | C13—C14—H141 | 109.2 (17) |
O5—C4—C3A | 107.26 (14) | C15—C14—H141 | 110.7 (16) |
O5—C4—C12 | 104.56 (16) | C13—C14—H142 | 107.4 (17) |
C3A—C4—C12 | 113.46 (17) | C15—C14—H142 | 109.4 (18) |
O5—C4—C16 | 108.01 (16) | H141—C14—H142 | 109 (2) |
C3A—C4—C16 | 112.13 (17) | C14—C15—C16 | 110.9 (2) |
C12—C4—C16 | 110.92 (18) | C14—C15—H151 | 110.9 (17) |
C5A—O5—C4 | 118.37 (13) | C16—C15—H151 | 109.5 (17) |
O5—C5A—C6 | 116.73 (16) | C14—C15—H152 | 109.6 (14) |
O5—C5A—C9A | 121.25 (16) | C16—C15—H152 | 107.3 (14) |
C6—C5A—C9A | 121.85 (16) | H151—C15—H152 | 109 (2) |
C7—C6—C5A | 118.55 (18) | C4—C16—C15 | 112.4 (2) |
C7—C6—H61 | 123.5 (12) | C4—C16—H161 | 106.8 (13) |
C5A—C6—H61 | 117.9 (12) | C15—C16—H161 | 110.5 (13) |
O10—C7—C6 | 123.63 (18) | C4—C16—H162 | 110.4 (13) |
O10—C7—C8 | 115.69 (17) | C15—C16—H162 | 110.8 (13) |
C6—C7—C8 | 120.68 (18) | H161—C16—H162 | 105.7 (19) |
C9—C8—C7 | 119.71 (19) | C18—N17—C2 | 120.09 (18) |
C9—C8—H81 | 120.0 (13) | N17—C18—N20 | 118.0 (2) |
C7—C8—H81 | 120.3 (13) | N17—C18—C19 | 123.8 (2) |
C8—C9—C9A | 121.1 (2) | N20—C18—C19 | 118.1 (2) |
C8—C9—H91 | 120.6 (14) | C18—C19—H19A | 109.5 |
C9A—C9—H91 | 118.2 (15) | C18—C19—H19B | 109.5 |
C9—C9A—C5A | 118.01 (18) | H19A—C19—H19B | 109.5 |
C9—C9A—C9B | 125.40 (18) | C18—C19—H19C | 109.5 |
C5A—C9A—C9B | 116.51 (16) | H19A—C19—H19C | 109.5 |
C3A—C9B—N1 | 117.40 (17) | H19B—C19—H19C | 109.5 |
C3A—C9B—C9A | 119.39 (17) | C18—N20—C22 | 119.9 (2) |
N1—C9B—C9A | 123.18 (16) | C18—N20—C21 | 123.2 (2) |
C7—O10—C11 | 117.49 (17) | C22—N20—C21 | 116.8 (2) |
O10—C11—H11A | 109.5 | N20—C21—H21A | 109.5 |
O10—C11—H11B | 109.5 | N20—C21—H21B | 109.5 |
H11A—C11—H11B | 109.5 | H21A—C21—H21B | 109.5 |
O10—C11—H11C | 109.5 | N20—C21—H21C | 109.5 |
H11A—C11—H11C | 109.5 | H21A—C21—H21C | 109.5 |
H11B—C11—H11C | 109.5 | H21B—C21—H21C | 109.5 |
C4—C12—C13 | 112.2 (2) | N20—C22—H22A | 109.5 |
C4—C12—H121 | 106.7 (13) | N20—C22—H22B | 109.5 |
C13—C12—H121 | 109.2 (13) | H22A—C22—H22B | 109.5 |
C4—C12—H122 | 110.2 (16) | N20—C22—H22C | 109.5 |
C13—C12—H122 | 112.2 (16) | H22A—C22—H22C | 109.5 |
H121—C12—H122 | 106 (2) | H22B—C22—H22C | 109.5 |
C9B—N1—C2—N17 | 174.7 (2) | C4—C3A—C9B—N1 | −176.95 (18) |
C9B—N1—C2—S3 | 0.3 (2) | S3—C3A—C9B—N1 | 0.5 (2) |
C9B—C3A—S3—C2 | −0.26 (16) | C4—C3A—C9B—C9A | 5.1 (3) |
C4—C3A—S3—C2 | 176.97 (19) | S3—C3A—C9B—C9A | −177.50 (15) |
N1—C2—S3—C3A | 0.00 (17) | C2—N1—C9B—C3A | −0.5 (3) |
N17—C2—S3—C3A | −174.98 (18) | C2—N1—C9B—C9A | 177.41 (18) |
C9B—C3A—C4—O5 | −32.2 (3) | C9—C9A—C9B—C3A | −170.1 (2) |
S3—C3A—C4—O5 | 150.85 (15) | C5A—C9A—C9B—C3A | 13.4 (3) |
C9B—C3A—C4—C12 | −147.2 (2) | C9—C9A—C9B—N1 | 12.1 (3) |
S3—C3A—C4—C12 | 35.9 (3) | C5A—C9A—C9B—N1 | −164.47 (18) |
C9B—C3A—C4—C16 | 86.2 (2) | C6—C7—O10—C11 | −1.2 (3) |
S3—C3A—C4—C16 | −90.7 (2) | C8—C7—O10—C11 | 178.4 (2) |
C3A—C4—O5—C5A | 44.4 (2) | O5—C4—C12—C13 | 63.2 (3) |
C12—C4—O5—C5A | 165.17 (16) | C3A—C4—C12—C13 | 179.8 (2) |
C16—C4—O5—C5A | −76.6 (2) | C16—C4—C12—C13 | −53.0 (3) |
C4—O5—C5A—C6 | 154.00 (16) | C4—C12—C13—C14 | 54.4 (3) |
C4—O5—C5A—C9A | −30.6 (2) | C12—C13—C14—C15 | −55.2 (3) |
O5—C5A—C6—C7 | 177.88 (16) | C13—C14—C15—C16 | 55.1 (3) |
C9A—C5A—C6—C7 | 2.6 (3) | O5—C4—C16—C15 | −60.5 (2) |
C5A—C6—C7—O10 | 179.29 (18) | C3A—C4—C16—C15 | −178.52 (19) |
C5A—C6—C7—C8 | −0.3 (3) | C12—C4—C16—C15 | 53.5 (3) |
O10—C7—C8—C9 | 178.4 (2) | C14—C15—C16—C4 | −54.7 (3) |
C6—C7—C8—C9 | −2.0 (3) | N1—C2—N17—C18 | 45.0 (3) |
C7—C8—C9—C9A | 2.1 (4) | S3—C2—N17—C18 | −140.69 (18) |
C8—C9—C9A—C5A | 0.1 (3) | C2—N17—C18—N20 | −164.45 (19) |
C8—C9—C9A—C9B | −176.4 (2) | C2—N17—C18—C19 | 18.9 (3) |
O5—C5A—C9A—C9 | −177.56 (18) | N17—C18—N20—C22 | 4.1 (3) |
C6—C5A—C9A—C9 | −2.4 (3) | C19—C18—N20—C22 | −179.0 (2) |
O5—C5A—C9A—C9B | −0.7 (3) | N17—C18—N20—C21 | −179.9 (2) |
C6—C5A—C9A—C9B | 174.37 (17) | C19—C18—N20—C21 | −3.1 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19B···O5i | 0.96 | 2.41 | 3.335 (3) | 161 |
C6—H61···N1ii | 0.95 (2) | 2.59 (2) | 3.441 (3) | 149.3 (15) |
Symmetry codes: (i) x−1/2, −y+1/2, z+1/2; (ii) x+1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H25N3O2S |
Mr | 371.49 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 9.2510 (2), 20.0273 (4), 10.7301 (2) |
β (°) | 90.840 (2) |
V (Å3) | 1987.78 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.18 |
Crystal size (mm) | 0.3 × 0.2 × 0.1 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Sapphire3 diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.892, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 56290, 3482, 2835 |
Rint | 0.041 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.113, 1.02 |
No. of reflections | 3482 |
No. of parameters | 291 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.18, −0.19 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), PLATON (Spek, 2009) and PARST (Nardelli, 1995).
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19B···O5i | 0.96 | 2.41 | 3.335 (3) | 161 |
C6—H61···N1ii | 0.95 (2) | 2.59 (2) | 3.441 (3) | 149.3 (15) |
Symmetry codes: (i) x−1/2, −y+1/2, z+1/2; (ii) x+1/2, −y+1/2, z−1/2. |
Acknowledgements
RK acknowledges the Department of Science & Technology for the single-crystal X-ray diffractometer sanctioned as a National Facility under project No. SR/S2/CMP-47/2003. He is also thankful to the UGC for research funding under research project F.No. 37–4154/2009 (J&K) (SR).
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Heterocyclic compounds containing nitrogen and sulfur are used for medical purposes for the treatment of different kinds of fungal and bacterial infection along with treatment of e.g. gastric ulcers and cancer (Bishayee et al., 1997; Cruz et al., 1995; Chitamber & Wereley, 1997). Thiazoles exhibit a wide range of biological activities (Pawar et al., 2009). Schiff bases and acetamidine play an important role in many biological processes. They are of great importance for the preparation of various pharmaceuticals and are used in many other areas of chemistry as starting materials. Their facile synthesis and numerous biological activities contribute greatly to their Schiff bases and acetamidine popularity (More et al., 2001; Sutariya et al., 2007; Murza et al., 1999; Dong et al., 2006; Jayashree et al., 2005; Modi et al., 1971; Vicini et al., 2003). Therefore, Schiff bases and acetamidine of amino thiazoles are expected to be biologically active. We report herein the X-ray crystallographic studies of a novel acetamidine base derived from substituted 8-methoxyspiro[chromeno[4,3-d] [1,3]thiazole-4,1-cyclohexan]-2-amine as a possible hybrid antimicrobial agent. In the title compound (Fig. 1), the methoxy substituent at the C7 atom forms the torsion angle of 178.4 (2) ° [(+) antiperiplanar conformation] with the atom set O10/C7/C8/C9. The benzopyran ring has a half-chair conformation with asymmetry parameter: ΔC2(C4—O5) = 4.49 (Duax et al., 1975). The cyclohexane ring has a chair conformation. The asymmetry parameters are: ΔCs(C4)=0.24; ΔC2(C4—C12)= 0.88. The dihedral angle between the best least squares planes through the thiazole and benzene rings is 14.75 (7)°. The stabilization of crystal packing (Fig. 2) is influenced by intermolecular C—H···N and C—H···O hydrogen bonding [C6—H61···N1 (symmetry code: x + 1/2, -y + 1/2, z - 1/2); C19—H19B···O5 (symmetry code: x - 1/2, -y + 1/2, z + 1/2)]. These interactions link the molecules into chains that run parallel to [-1 0 1].