metal-organic compounds
Tris(2,2′-bi-1H-imidazole-κ2N3,N3′)nickel(II) dinitrate N,N-dimethylformamide monosolvate
aDepartment of Chemistry, Capital Normal University, Beijing 100048, People's Republic of China, and bKey Laboratory of Terahertz Optoelectronics, Ministry of Education, Department of Physics, Capital Normal University, Beijing 100048, People's Republic of China
*Correspondence e-mail: jinqh204@163.com
The reaction of nickel salts and 4,4′-bipyridine with 2,2′-biimidazole (H2biim) yielded the title complex, [Ni(C6H6N4)3](NO3)2·C3H7NO. The NiII atom is chelated by three H2biim ligands in a distorted octahedral coordination geometry. The two nitrate anions and one dimethylformamide (DMF) molecule are not coordinated. The compound has a three-dimensional structure, formed by extensive hydrogen bonding between [Ni(H2biim)3]2+ cations and nitrate anions, each nitrate anion forming hydrogen bonds with an R12(4) motif. The DMF molecule is disordered over three sets of sites, with occupancy ratios of 0.341 (16):0.350 (17):0.309 (19).
Related literature
For related literature on the 2,2′-biimidazole ligand, see: Ding et al. (2005); Gruia et al. (2007); Martinez Lorente et al. (1995). For related structures, see: Dai et al. (2010); Jin et al. (2010); Yang et al. (2005).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2007); cell SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811043030/zk2032sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811043030/zk2032Isup2.hkl
The title complex has been prepared by adding 4,4'-bipyridine (0.2 mmol) and H2biim (0.4 mmol) into a stirred CH3OH (5 mL) and H2O (5 mL) containing Ni(NO3)2.6H2O (0.2 mmol). The mixture was refluxed for 30 min and then allowed to cool to ambient temperature. The filtrate was evaporated slowly at room temperature for several weeks to yield purple crystalline products.
Metal atom centers were located from the E-maps and other non-hydrogen atoms were located in successive difference Fourier syntheses. The final refinements were performed by full matrix least-squares methods with anisotropic thermal parameters for non-hydrogen atoms on F2.
The final refinements were performed with isotropic thermal parameters. All hydrogen atoms were located in the calculated sites and included in the final
in the riding model approximation with displacement parameters derived from the parent atoms to which they were bonded.Data collection: SMART (Bruker, 2007); cell
SAINTPlus (Bruker, 2007); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.Data collection: SMART (Bruker, 2007); cell
SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. .1. The molecular entities of the title compound, showing the atom-numbering scheme and with displacement ellipsoids drawn at the 50% probability level. | |
Fig. 2. The three-dimensional structure of the title complex formed through intermolecular N—H···O hydrogen bonds. |
[Ni(C6H6N4)3](NO3)2·C3H7NO | F(000) = 1360 |
Mr = 658.27 | Dx = 1.417 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
a = 12.2150 (11) Å | Cell parameters from 1160 reflections |
b = 20.864 (2) Å | θ = 2.5–17.3° |
c = 12.1080 (12) Å | µ = 0.69 mm−1 |
β = 90.528 (1)° | T = 298 K |
V = 3085.6 (5) Å3 | Block, purple |
Z = 4 | 0.36 × 0.19 × 0.12 mm |
Bruker SMART CCD area-detector diffractometer | 4289 independent reflections |
Radiation source: fine-focus sealed tube | 1969 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.131 |
phi and ω scans | θmax = 25.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −14→14 |
Tmin = 0.788, Tmax = 0.921 | k = −23→24 |
7496 measured reflections | l = −14→13 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.109 | H-atom parameters constrained |
wR(F2) = 0.276 | w = 1/[σ2(Fo2) + (0.117P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
4289 reflections | Δρmax = 0.54 e Å−3 |
437 parameters | Δρmin = −0.61 e Å−3 |
3 restraints | Absolute structure: Flack (1983), 1549 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (6) |
[Ni(C6H6N4)3](NO3)2·C3H7NO | V = 3085.6 (5) Å3 |
Mr = 658.27 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 12.2150 (11) Å | µ = 0.69 mm−1 |
b = 20.864 (2) Å | T = 298 K |
c = 12.1080 (12) Å | 0.36 × 0.19 × 0.12 mm |
β = 90.528 (1)° |
Bruker SMART CCD area-detector diffractometer | 4289 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | 1969 reflections with I > 2σ(I) |
Tmin = 0.788, Tmax = 0.921 | Rint = 0.131 |
7496 measured reflections |
R[F2 > 2σ(F2)] = 0.109 | H-atom parameters constrained |
wR(F2) = 0.276 | Δρmax = 0.54 e Å−3 |
S = 1.06 | Δρmin = −0.61 e Å−3 |
4289 reflections | Absolute structure: Flack (1983), 1549 Friedel pairs |
437 parameters | Absolute structure parameter: 0.00 (6) |
3 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Ni1 | 0.6556 (2) | 0.33319 (8) | 0.3945 (2) | 0.0423 (5) | |
N1 | 0.7111 (15) | 0.2490 (8) | 0.3170 (16) | 0.065 (5) | |
N2 | 0.6946 (14) | 0.1433 (8) | 0.3119 (16) | 0.075 (5) | |
H2 | 0.6816 | 0.1045 | 0.3317 | 0.090* | |
N3 | 0.6035 (15) | 0.2688 (8) | 0.5051 (14) | 0.062 (5) | |
N4 | 0.5823 (19) | 0.1662 (7) | 0.5541 (19) | 0.072 (6) | |
H4 | 0.5800 | 0.1251 | 0.5481 | 0.086* | |
N5 | 0.5220 (19) | 0.3337 (7) | 0.2926 (18) | 0.068 (6) | |
N6 | 0.3559 (17) | 0.3726 (9) | 0.2553 (18) | 0.085 (6) | |
H6 | 0.2946 | 0.3922 | 0.2640 | 0.102* | |
N7 | 0.5692 (17) | 0.4055 (8) | 0.4700 (15) | 0.067 (5) | |
N8 | 0.4052 (15) | 0.4534 (8) | 0.4806 (16) | 0.079 (6) | |
H8 | 0.3384 | 0.4638 | 0.4666 | 0.095* | |
N9 | 0.7373 (16) | 0.3892 (8) | 0.2801 (16) | 0.065 (5) | |
N10 | 0.8848 (15) | 0.4446 (7) | 0.2328 (16) | 0.067 (5) | |
H10 | 0.9503 | 0.4596 | 0.2342 | 0.081* | |
N11 | 0.7983 (16) | 0.3544 (8) | 0.4856 (16) | 0.064 (5) | |
N12 | 0.9522 (14) | 0.4110 (8) | 0.4904 (17) | 0.076 (5) | |
H12 | 1.0047 | 0.4360 | 0.4712 | 0.091* | |
N13 | 0.161 (2) | 0.4854 (9) | 0.0305 (15) | 0.072 (5) | |
N14 | 0.154 (2) | 0.4795 (11) | 0.2929 (17) | 0.081 (6) | |
N15 | 0.102 (8) | 0.110 (4) | 0.383 (5) | 0.103 (14) | 0.341 (16) |
N16 | 0.103 (6) | 0.237 (4) | 0.409 (5) | 0.103 (14) | 0.350 (17) |
N17 | 0.266 (9) | 0.186 (4) | 0.395 (7) | 0.103 (14) | 0.309 (19) |
O1 | 0.0657 (16) | 0.4662 (7) | 0.0412 (16) | 0.102 (5) | |
O2 | 0.1804 (15) | 0.5453 (8) | 0.0304 (14) | 0.093 (5) | |
O3 | 0.2365 (15) | 0.4472 (8) | 0.0272 (12) | 0.098 (5) | |
O4 | 0.2461 (15) | 0.5046 (7) | 0.2861 (11) | 0.081 (4) | |
O5 | 0.0835 (15) | 0.5192 (7) | 0.2951 (14) | 0.091 (5) | |
O6 | 0.1376 (15) | 0.4256 (8) | 0.2796 (14) | 0.097 (5) | |
O7 | 0.266 (6) | 0.077 (3) | 0.364 (4) | 0.104 (11) | 0.341 (16) |
O8 | −0.002 (5) | 0.155 (3) | 0.400 (4) | 0.104 (11) | 0.350 (17) |
O9 | 0.358 (5) | 0.104 (3) | 0.352 (5) | 0.104 (11) | 0.309 (19) |
C1 | 0.6771 (18) | 0.1972 (8) | 0.3734 (19) | 0.066 (6) | |
C2 | 0.737 (3) | 0.1628 (11) | 0.212 (3) | 0.089 (9) | |
H2B | 0.7517 | 0.1368 | 0.1521 | 0.107* | |
C3 | 0.7530 (18) | 0.2277 (10) | 0.219 (2) | 0.071 (6) | |
H3 | 0.7867 | 0.2530 | 0.1663 | 0.086* | |
C4 | 0.6245 (18) | 0.2077 (10) | 0.4790 (18) | 0.068 (6) | |
C5 | 0.5439 (16) | 0.2016 (10) | 0.6411 (19) | 0.074 (6) | |
H5 | 0.5196 | 0.1846 | 0.7075 | 0.089* | |
C6 | 0.5468 (17) | 0.2652 (10) | 0.6160 (18) | 0.074 (6) | |
H6A | 0.5199 | 0.2991 | 0.6577 | 0.089* | |
C7 | 0.446 (2) | 0.3781 (10) | 0.321 (2) | 0.075 (7) | |
C8 | 0.380 (2) | 0.3300 (10) | 0.173 (2) | 0.088 (7) | |
H8A | 0.3379 | 0.3212 | 0.1104 | 0.106* | |
C9 | 0.479 (2) | 0.3029 (11) | 0.2000 (19) | 0.083 (7) | |
H9 | 0.5120 | 0.2692 | 0.1626 | 0.099* | |
C10 | 0.469 (2) | 0.4126 (10) | 0.422 (2) | 0.073 (7) | |
C11 | 0.469 (2) | 0.4745 (10) | 0.567 (2) | 0.080 (7) | |
H11 | 0.4484 | 0.5041 | 0.6199 | 0.096* | |
C12 | 0.5682 (19) | 0.4447 (9) | 0.5607 (19) | 0.071 (6) | |
H12A | 0.6259 | 0.4501 | 0.6105 | 0.085* | |
C13 | 0.833 (2) | 0.4131 (9) | 0.317 (2) | 0.064 (6) | |
C14 | 0.8125 (19) | 0.4477 (10) | 0.147 (2) | 0.082 (6) | |
H14 | 0.8234 | 0.4689 | 0.0801 | 0.099* | |
C15 | 0.7209 (19) | 0.4138 (9) | 0.1757 (19) | 0.073 (6) | |
H15 | 0.6584 | 0.4085 | 0.1324 | 0.088* | |
C16 | 0.8647 (18) | 0.3931 (10) | 0.427 (2) | 0.062 (6) | |
C17 | 0.9403 (19) | 0.3817 (11) | 0.591 (2) | 0.077 (7) | |
H17 | 0.9886 | 0.3849 | 0.6504 | 0.092* | |
C18 | 0.8452 (18) | 0.3468 (9) | 0.5885 (19) | 0.071 (6) | |
H18 | 0.8174 | 0.3224 | 0.6461 | 0.086* | |
C19 | 0.176 (8) | 0.065 (3) | 0.405 (7) | 0.097 (15) | 0.341 (16) |
H19 | 0.1619 | 0.0286 | 0.4466 | 0.117* | 0.341 (16) |
C20 | 0.126 (11) | 0.178 (6) | 0.403 (10) | 0.10 (2) | 0.341 (16) |
H20A | 0.1347 | 0.1849 | 0.4811 | 0.143* | 0.341 (16) |
H20B | 0.0657 | 0.2034 | 0.3760 | 0.143* | 0.341 (16) |
H20C | 0.1914 | 0.1899 | 0.3657 | 0.143* | 0.341 (16) |
C21 | −0.015 (7) | 0.094 (4) | 0.373 (6) | 0.100 (14) | 0.341 (16) |
H21A | −0.0309 | 0.0804 | 0.2988 | 0.150* | 0.341 (16) |
H21B | −0.0573 | 0.1315 | 0.3897 | 0.150* | 0.341 (16) |
H21C | −0.0325 | 0.0604 | 0.4236 | 0.150* | 0.341 (16) |
C22 | 0.001 (7) | 0.214 (4) | 0.413 (6) | 0.097 (15) | 0.350 (17) |
H22 | −0.0604 | 0.2396 | 0.4246 | 0.117* | 0.350 (17) |
C23 | 0.195 (11) | 0.192 (7) | 0.390 (9) | 0.10 (2) | 0.350 (17) |
H23A | 0.1675 | 0.1534 | 0.3550 | 0.143* | 0.350 (17) |
H23B | 0.2286 | 0.1809 | 0.4591 | 0.143* | 0.350 (17) |
H23C | 0.2477 | 0.2116 | 0.3427 | 0.143* | 0.350 (17) |
C24 | 0.135 (6) | 0.296 (3) | 0.467 (6) | 0.100 (14) | 0.350 (17) |
H24A | 0.0830 | 0.3288 | 0.4518 | 0.150* | 0.350 (17) |
H24B | 0.2063 | 0.3088 | 0.4425 | 0.150* | 0.350 (17) |
H24C | 0.1380 | 0.2875 | 0.5452 | 0.150* | 0.350 (17) |
C25 | 0.364 (9) | 0.159 (5) | 0.392 (7) | 0.097 (15) | 0.309 (19) |
H25 | 0.4286 | 0.1781 | 0.4163 | 0.117* | 0.309 (19) |
C26 | 0.166 (12) | 0.147 (6) | 0.386 (12) | 0.10 (2) | 0.309 (19) |
H26A | 0.1795 | 0.1111 | 0.3375 | 0.143* | 0.309 (19) |
H26B | 0.1077 | 0.1725 | 0.3559 | 0.143* | 0.309 (19) |
H26C | 0.1463 | 0.1313 | 0.4574 | 0.143* | 0.309 (19) |
C27 | 0.251 (8) | 0.256 (4) | 0.397 (6) | 0.100 (14) | 0.309 (19) |
H27A | 0.2538 | 0.2709 | 0.4717 | 0.150* | 0.309 (19) |
H27B | 0.1813 | 0.2663 | 0.3645 | 0.150* | 0.309 (19) |
H27C | 0.3081 | 0.2760 | 0.3552 | 0.150* | 0.309 (19) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0549 (11) | 0.0431 (10) | 0.0289 (10) | 0.0010 (13) | −0.0019 (7) | −0.0009 (13) |
N1 | 0.083 (13) | 0.054 (10) | 0.059 (13) | −0.001 (9) | 0.002 (9) | −0.003 (10) |
N2 | 0.113 (15) | 0.051 (9) | 0.061 (12) | 0.011 (8) | 0.017 (10) | −0.010 (9) |
N3 | 0.084 (12) | 0.052 (10) | 0.051 (12) | −0.004 (8) | 0.005 (9) | −0.002 (8) |
N4 | 0.108 (18) | 0.052 (11) | 0.055 (14) | −0.008 (10) | 0.012 (12) | 0.015 (10) |
N5 | 0.084 (13) | 0.059 (10) | 0.061 (13) | 0.010 (10) | −0.014 (10) | −0.009 (9) |
N6 | 0.096 (15) | 0.088 (14) | 0.072 (15) | 0.023 (12) | −0.014 (13) | −0.004 (11) |
N7 | 0.084 (15) | 0.058 (10) | 0.058 (13) | 0.007 (9) | 0.001 (10) | −0.002 (9) |
N8 | 0.094 (14) | 0.077 (11) | 0.067 (14) | 0.039 (10) | 0.001 (11) | −0.012 (10) |
N9 | 0.073 (13) | 0.056 (10) | 0.066 (14) | −0.003 (8) | −0.001 (10) | 0.004 (9) |
N10 | 0.069 (13) | 0.062 (10) | 0.071 (14) | −0.014 (9) | 0.005 (10) | 0.006 (10) |
N11 | 0.076 (14) | 0.053 (9) | 0.061 (13) | −0.004 (9) | −0.014 (11) | 0.000 (9) |
N12 | 0.070 (12) | 0.075 (12) | 0.084 (15) | −0.018 (9) | −0.011 (10) | −0.008 (11) |
N13 | 0.096 (17) | 0.057 (12) | 0.064 (13) | −0.004 (12) | 0.018 (11) | 0.023 (9) |
N14 | 0.101 (18) | 0.073 (15) | 0.071 (15) | −0.011 (15) | −0.015 (12) | −0.006 (12) |
N15 | 0.14 (4) | 0.11 (3) | 0.05 (2) | 0.01 (3) | −0.01 (3) | 0.03 (2) |
N16 | 0.14 (4) | 0.11 (3) | 0.05 (2) | 0.01 (3) | −0.01 (3) | 0.03 (2) |
N17 | 0.14 (4) | 0.11 (3) | 0.05 (2) | 0.01 (3) | −0.01 (3) | 0.03 (2) |
O1 | 0.114 (15) | 0.084 (11) | 0.107 (15) | 0.007 (10) | 0.011 (11) | 0.028 (10) |
O2 | 0.121 (14) | 0.074 (10) | 0.085 (12) | −0.001 (9) | −0.003 (10) | 0.013 (9) |
O3 | 0.131 (14) | 0.097 (11) | 0.065 (11) | 0.043 (11) | −0.005 (9) | 0.027 (8) |
O4 | 0.107 (13) | 0.083 (10) | 0.054 (10) | 0.006 (10) | −0.009 (9) | 0.011 (8) |
O5 | 0.111 (13) | 0.066 (9) | 0.094 (14) | 0.036 (9) | 0.010 (10) | −0.012 (8) |
O6 | 0.124 (14) | 0.088 (11) | 0.080 (13) | −0.002 (11) | −0.006 (10) | 0.015 (10) |
O7 | 0.14 (4) | 0.11 (3) | 0.056 (18) | 0.00 (2) | −0.01 (2) | 0.032 (18) |
O8 | 0.14 (4) | 0.11 (3) | 0.056 (18) | 0.00 (2) | −0.01 (2) | 0.032 (18) |
O9 | 0.14 (4) | 0.11 (3) | 0.056 (18) | 0.00 (2) | −0.01 (2) | 0.032 (18) |
C1 | 0.092 (19) | 0.050 (10) | 0.057 (18) | 0.008 (11) | 0.004 (13) | −0.002 (11) |
C2 | 0.12 (3) | 0.072 (18) | 0.07 (2) | 0.011 (13) | 0.013 (17) | −0.006 (14) |
C3 | 0.100 (17) | 0.058 (14) | 0.056 (16) | 0.010 (11) | 0.008 (12) | −0.006 (11) |
C4 | 0.089 (16) | 0.061 (14) | 0.054 (16) | −0.002 (11) | 0.002 (12) | 0.004 (12) |
C5 | 0.101 (17) | 0.061 (13) | 0.060 (15) | 0.004 (11) | 0.030 (12) | 0.008 (11) |
C6 | 0.101 (17) | 0.063 (13) | 0.058 (15) | 0.001 (11) | 0.019 (12) | 0.000 (10) |
C7 | 0.084 (19) | 0.069 (14) | 0.071 (18) | 0.011 (13) | −0.008 (14) | −0.014 (12) |
C8 | 0.101 (19) | 0.083 (15) | 0.081 (17) | 0.022 (15) | −0.014 (14) | −0.007 (15) |
C9 | 0.096 (18) | 0.078 (15) | 0.074 (18) | 0.017 (13) | −0.009 (14) | −0.005 (13) |
C10 | 0.086 (18) | 0.067 (13) | 0.066 (17) | 0.026 (12) | 0.008 (13) | −0.006 (12) |
C11 | 0.10 (2) | 0.072 (14) | 0.066 (17) | 0.024 (13) | 0.008 (14) | −0.010 (12) |
C12 | 0.098 (17) | 0.056 (12) | 0.059 (15) | 0.027 (12) | 0.004 (12) | −0.010 (11) |
C13 | 0.073 (16) | 0.053 (11) | 0.066 (17) | −0.004 (11) | 0.004 (13) | −0.004 (11) |
C14 | 0.088 (17) | 0.082 (15) | 0.077 (18) | −0.022 (13) | 0.007 (14) | 0.004 (13) |
C15 | 0.090 (16) | 0.064 (13) | 0.066 (16) | −0.015 (11) | 0.001 (12) | 0.000 (11) |
C16 | 0.067 (15) | 0.056 (13) | 0.064 (16) | −0.012 (10) | −0.002 (12) | −0.006 (11) |
C17 | 0.073 (16) | 0.075 (14) | 0.083 (19) | −0.012 (12) | −0.018 (13) | −0.011 (14) |
C18 | 0.078 (16) | 0.063 (12) | 0.073 (16) | 0.001 (11) | −0.017 (12) | −0.002 (11) |
C19 | 0.14 (5) | 0.10 (3) | 0.05 (3) | 0.01 (3) | −0.01 (3) | 0.03 (3) |
C20 | 0.14 (7) | 0.11 (6) | 0.04 (3) | 0.01 (5) | −0.02 (4) | 0.04 (4) |
C21 | 0.14 (4) | 0.11 (3) | 0.05 (3) | 0.01 (3) | −0.01 (2) | 0.03 (3) |
C22 | 0.14 (5) | 0.10 (3) | 0.05 (3) | 0.01 (3) | −0.01 (3) | 0.03 (3) |
C23 | 0.14 (7) | 0.11 (6) | 0.04 (3) | 0.01 (5) | −0.02 (4) | 0.04 (4) |
C24 | 0.14 (4) | 0.11 (3) | 0.05 (3) | 0.01 (3) | −0.01 (2) | 0.03 (3) |
C25 | 0.14 (5) | 0.10 (3) | 0.05 (3) | 0.01 (3) | −0.01 (3) | 0.03 (3) |
C26 | 0.14 (7) | 0.11 (6) | 0.04 (3) | 0.01 (5) | −0.02 (4) | 0.04 (4) |
C27 | 0.14 (4) | 0.11 (3) | 0.05 (3) | 0.01 (3) | −0.01 (2) | 0.03 (3) |
Ni1—N3 | 2.005 (18) | N17—C25 | 1.32 (11) |
Ni1—N5 | 2.04 (2) | N17—C27 | 1.47 (11) |
Ni1—N7 | 2.060 (19) | N17—C26 | 1.48 (16) |
Ni1—N9 | 2.075 (19) | O7—C19 | 1.24 (10) |
Ni1—N11 | 2.101 (18) | O8—C22 | 1.25 (8) |
Ni1—N1 | 2.106 (18) | O9—C25 | 1.24 (9) |
N1—C1 | 1.35 (2) | C1—C4 | 1.45 (3) |
N1—C3 | 1.37 (3) | C2—C3 | 1.37 (3) |
N2—C1 | 1.37 (2) | C2—H2B | 0.9300 |
N2—C2 | 1.38 (4) | C3—H3 | 0.9300 |
N2—H2 | 0.8600 | C5—C6 | 1.36 (3) |
N3—C4 | 1.34 (2) | C5—H5 | 0.9300 |
N3—C6 | 1.52 (3) | C6—H6A | 0.9300 |
N4—C4 | 1.36 (3) | C7—C10 | 1.44 (3) |
N4—C5 | 1.37 (3) | C8—C9 | 1.37 (3) |
N4—H4 | 0.8600 | C8—H8A | 0.9300 |
N5—C7 | 1.35 (3) | C9—H9 | 0.9300 |
N5—C9 | 1.39 (3) | C11—C12 | 1.36 (3) |
N6—C7 | 1.36 (3) | C11—H11 | 0.9300 |
N6—C8 | 1.37 (3) | C12—H12A | 0.9300 |
N6—H6 | 0.8600 | C13—C16 | 1.45 (3) |
N7—C10 | 1.36 (3) | C14—C15 | 1.37 (3) |
N7—C12 | 1.37 (3) | C14—H14 | 0.9300 |
N8—C10 | 1.36 (3) | C15—H15 | 0.9300 |
N8—C11 | 1.37 (3) | C17—C18 | 1.37 (3) |
N8—H8 | 0.8600 | C17—H17 | 0.9300 |
N9—C13 | 1.35 (3) | C18—H18 | 0.9300 |
N9—C15 | 1.38 (3) | C19—H19 | 0.9300 |
N10—C14 | 1.36 (3) | C20—H20A | 0.9600 |
N10—C13 | 1.37 (3) | C20—H20B | 0.9600 |
N10—H10 | 0.8600 | C20—H20C | 0.9600 |
N11—C16 | 1.35 (3) | C21—H21A | 0.9600 |
N11—C18 | 1.38 (3) | C21—H21B | 0.9600 |
N12—C16 | 1.36 (2) | C21—H21C | 0.9600 |
N12—C17 | 1.37 (3) | C22—H22 | 0.9300 |
N12—H12 | 0.8600 | C23—H23A | 0.9600 |
N13—O3 | 1.22 (2) | C23—H23B | 0.9600 |
N13—O1 | 1.23 (2) | C23—H23C | 0.9600 |
N13—O2 | 1.27 (2) | C24—H24A | 0.9600 |
N14—O6 | 1.15 (2) | C24—H24B | 0.9600 |
N14—O5 | 1.20 (2) | C24—H24C | 0.9600 |
N14—O4 | 1.24 (3) | C25—H25 | 0.9300 |
N15—C19 | 1.32 (8) | C26—H26A | 0.9600 |
N15—C21 | 1.47 (11) | C26—H26B | 0.9600 |
N15—C20 | 1.48 (12) | C26—H26C | 0.9600 |
N16—C22 | 1.33 (9) | C27—H27A | 0.9600 |
N16—C24 | 1.47 (9) | C27—H27B | 0.9600 |
N16—C23 | 1.48 (13) | C27—H27C | 0.9600 |
N3—Ni1—N5 | 98.6 (8) | N2—C2—H2B | 126.5 |
N3—Ni1—N7 | 91.5 (8) | N1—C3—C2 | 109 (3) |
N5—Ni1—N7 | 81.6 (8) | N1—C3—H3 | 125.7 |
N3—Ni1—N9 | 168.8 (8) | C2—C3—H3 | 125.7 |
N5—Ni1—N9 | 88.9 (8) | N3—C4—N4 | 112 (2) |
N7—Ni1—N9 | 97.8 (6) | N3—C4—C1 | 116.0 (19) |
N3—Ni1—N11 | 93.3 (7) | N4—C4—C1 | 132 (2) |
N5—Ni1—N11 | 166.6 (7) | C6—C5—N4 | 110 (2) |
N7—Ni1—N11 | 92.2 (8) | C6—C5—H5 | 125.0 |
N9—Ni1—N11 | 80.2 (8) | N4—C5—H5 | 125.0 |
N3—Ni1—N1 | 81.1 (7) | C5—C6—N3 | 105.0 (18) |
N5—Ni1—N1 | 89.7 (7) | C5—C6—H6A | 127.5 |
N7—Ni1—N1 | 167.6 (8) | N3—C6—H6A | 127.5 |
N9—Ni1—N1 | 90.8 (7) | N5—C7—N6 | 110 (2) |
N11—Ni1—N1 | 98.1 (7) | N5—C7—C10 | 115 (2) |
C1—N1—C3 | 107.2 (17) | N6—C7—C10 | 133 (3) |
C1—N1—Ni1 | 110.0 (15) | C9—C8—N6 | 107 (2) |
C3—N1—Ni1 | 141.4 (15) | C9—C8—H8A | 126.6 |
C1—N2—C2 | 107.2 (17) | N6—C8—H8A | 126.6 |
C1—N2—H2 | 126.4 | C8—C9—N5 | 109 (2) |
C2—N2—H2 | 126.4 | C8—C9—H9 | 125.4 |
C4—N3—C6 | 104.5 (18) | N5—C9—H9 | 125.4 |
C4—N3—Ni1 | 114.7 (15) | N7—C10—N8 | 111 (2) |
C6—N3—Ni1 | 140.7 (13) | N7—C10—C7 | 118 (2) |
C4—N4—C5 | 107.7 (16) | N8—C10—C7 | 130 (2) |
C4—N4—H4 | 126.1 | C12—C11—N8 | 108 (2) |
C5—N4—H4 | 126.1 | C12—C11—H11 | 125.8 |
C7—N5—C9 | 105 (2) | N8—C11—H11 | 125.8 |
C7—N5—Ni1 | 113.4 (16) | C11—C12—N7 | 109 (2) |
C9—N5—Ni1 | 141.2 (17) | C11—C12—H12A | 125.4 |
C7—N6—C8 | 107 (2) | N7—C12—H12A | 125.4 |
C7—N6—H6 | 126.3 | N9—C13—N10 | 110 (2) |
C8—N6—H6 | 126.3 | N9—C13—C16 | 115 (2) |
C10—N7—C12 | 105.4 (19) | N10—C13—C16 | 135 (2) |
C10—N7—Ni1 | 110.6 (15) | N10—C14—C15 | 108 (2) |
C12—N7—Ni1 | 143.3 (16) | N10—C14—H14 | 126.2 |
C10—N8—C11 | 106 (2) | C15—C14—H14 | 126.2 |
C10—N8—H8 | 127.1 | C14—C15—N9 | 108 (2) |
C11—N8—H8 | 127.1 | C14—C15—H15 | 125.8 |
C13—N9—C15 | 106.4 (19) | N9—C15—H15 | 125.8 |
C13—N9—Ni1 | 114.3 (16) | N11—C16—N12 | 110 (2) |
C15—N9—Ni1 | 139.1 (16) | N11—C16—C13 | 120 (2) |
C14—N10—C13 | 107.1 (19) | N12—C16—C13 | 130 (2) |
C14—N10—H10 | 126.5 | N12—C17—C18 | 108 (2) |
C13—N10—H10 | 126.5 | N12—C17—H17 | 125.8 |
C16—N11—C18 | 107.3 (19) | C18—C17—H17 | 125.8 |
C16—N11—Ni1 | 110.4 (15) | C17—C18—N11 | 108 (2) |
C18—N11—Ni1 | 142.0 (17) | C17—C18—H18 | 126.2 |
C16—N12—C17 | 107 (2) | N11—C18—H18 | 126.2 |
C16—N12—H12 | 126.6 | O7—C19—N15 | 113 (8) |
C17—N12—H12 | 126.6 | O7—C19—H19 | 123.6 |
O3—N13—O1 | 120.2 (19) | N15—C19—H19 | 123.6 |
O3—N13—O2 | 120 (2) | O8—C22—N16 | 112 (8) |
O1—N13—O2 | 120 (2) | O8—C22—H22 | 124.0 |
O6—N14—O5 | 124 (3) | N16—C22—H22 | 124.0 |
O6—N14—O4 | 124 (3) | N16—C23—H23A | 109.5 |
O5—N14—O4 | 111 (2) | N16—C23—H23B | 109.5 |
C19—N15—C21 | 122 (8) | H23A—C23—H23B | 109.5 |
C19—N15—C20 | 121 (9) | N16—C23—H23C | 109.5 |
C21—N15—C20 | 114 (8) | H23A—C23—H23C | 109.5 |
C22—N16—C24 | 122 (8) | H23B—C23—H23C | 109.5 |
C22—N16—C23 | 120 (9) | N16—C24—H24A | 109.5 |
C24—N16—C23 | 114 (8) | N16—C24—H24B | 109.5 |
C25—N17—C27 | 123 (10) | H24A—C24—H24B | 109.5 |
C25—N17—C26 | 120 (10) | N16—C24—H24C | 109.5 |
C27—N17—C26 | 116 (10) | H24A—C24—H24C | 109.5 |
N1—C1—N2 | 109.6 (18) | H24B—C24—H24C | 109.5 |
N1—C1—C4 | 117.7 (18) | O9—C25—N17 | 111 (10) |
N2—C1—C4 | 132.5 (18) | O9—C25—H25 | 124.5 |
C3—C2—N2 | 107 (3) | N17—C25—H25 | 124.5 |
C3—C2—H2B | 126.5 | ||
N3—Ni1—N1—C1 | 4.9 (14) | N2—C2—C3—N1 | −6 (3) |
N5—Ni1—N1—C1 | −93.9 (15) | C6—N3—C4—N4 | 4 (2) |
N7—Ni1—N1—C1 | −49 (4) | Ni1—N3—C4—N4 | −176.8 (15) |
N9—Ni1—N1—C1 | 177.2 (14) | C6—N3—C4—C1 | 178.6 (17) |
N11—Ni1—N1—C1 | 97.0 (14) | Ni1—N3—C4—C1 | −3 (2) |
N3—Ni1—N1—C3 | 169 (2) | C5—N4—C4—N3 | −8 (3) |
N5—Ni1—N1—C3 | 70 (2) | C5—N4—C4—C1 | 179 (2) |
N7—Ni1—N1—C3 | 115 (4) | N1—C1—C4—N3 | 7 (3) |
N9—Ni1—N1—C3 | −19 (2) | N2—C1—C4—N3 | −168 (2) |
N11—Ni1—N1—C3 | −99 (2) | N1—C1—C4—N4 | −180 (2) |
N5—Ni1—N3—C4 | 87.1 (16) | N2—C1—C4—N4 | 5 (4) |
N7—Ni1—N3—C4 | 168.8 (15) | C4—N4—C5—C6 | 9 (3) |
N9—Ni1—N3—C4 | −45 (5) | N4—C5—C6—N3 | −6 (2) |
N11—Ni1—N3—C4 | −98.9 (15) | C4—N3—C6—C5 | 1 (2) |
N1—Ni1—N3—C4 | −1.2 (15) | Ni1—N3—C6—C5 | −177.4 (17) |
N5—Ni1—N3—C6 | −95 (2) | C9—N5—C7—N6 | 5 (3) |
N7—Ni1—N3—C6 | −13 (2) | Ni1—N5—C7—N6 | −175.1 (16) |
N9—Ni1—N3—C6 | 134 (4) | C9—N5—C7—C10 | 175 (2) |
N11—Ni1—N3—C6 | 79 (2) | Ni1—N5—C7—C10 | −5 (3) |
N1—Ni1—N3—C6 | 177 (2) | C8—N6—C7—N5 | −9 (3) |
N3—Ni1—N5—C7 | 90.6 (18) | C8—N6—C7—C10 | −176 (3) |
N7—Ni1—N5—C7 | 0.3 (18) | C7—N6—C8—C9 | 9 (3) |
N9—Ni1—N5—C7 | −97.8 (18) | N6—C8—C9—N5 | −7 (3) |
N11—Ni1—N5—C7 | −63 (6) | C7—N5—C9—C8 | 1 (3) |
N1—Ni1—N5—C7 | 171.5 (19) | Ni1—N5—C9—C8 | −179 (2) |
N3—Ni1—N5—C9 | −89 (3) | C12—N7—C10—N8 | −2 (2) |
N7—Ni1—N5—C9 | −179 (3) | Ni1—N7—C10—N8 | 171.0 (15) |
N9—Ni1—N5—C9 | 83 (3) | C12—N7—C10—C7 | 178 (2) |
N11—Ni1—N5—C9 | 118 (4) | Ni1—N7—C10—C7 | −9 (3) |
N1—Ni1—N5—C9 | −8 (3) | C11—N8—C10—N7 | 2 (3) |
N3—Ni1—N7—C10 | −93.7 (15) | C11—N8—C10—C7 | −177 (2) |
N5—Ni1—N7—C10 | 4.8 (15) | N5—C7—C10—N7 | 10 (3) |
N9—Ni1—N7—C10 | 92.5 (16) | N6—C7—C10—N7 | 177 (2) |
N11—Ni1—N7—C10 | 172.9 (16) | N5—C7—C10—N8 | −170 (2) |
N1—Ni1—N7—C10 | −41 (4) | N6—C7—C10—N8 | −3 (5) |
N3—Ni1—N7—C12 | 74 (3) | C10—N8—C11—C12 | −2 (3) |
N5—Ni1—N7—C12 | 173 (3) | N8—C11—C12—N7 | 1 (3) |
N9—Ni1—N7—C12 | −100 (2) | C10—N7—C12—C11 | 0 (2) |
N11—Ni1—N7—C12 | −19 (3) | Ni1—N7—C12—C11 | −168 (2) |
N1—Ni1—N7—C12 | 127 (4) | C15—N9—C13—N10 | −8 (2) |
N3—Ni1—N9—C13 | −58 (4) | Ni1—N9—C13—N10 | 175.0 (13) |
N5—Ni1—N9—C13 | 169.8 (15) | C15—N9—C13—C16 | 179.3 (18) |
N7—Ni1—N9—C13 | 88.5 (16) | Ni1—N9—C13—C16 | 3 (2) |
N11—Ni1—N9—C13 | −2.4 (14) | C14—N10—C13—N9 | 8 (2) |
N1—Ni1—N9—C13 | −100.5 (14) | C14—N10—C13—C16 | 178 (2) |
N3—Ni1—N9—C15 | 127 (4) | C13—N10—C14—C15 | −4 (2) |
N5—Ni1—N9—C15 | −5 (2) | N10—C14—C15—N9 | −1 (2) |
N7—Ni1—N9—C15 | −87 (2) | C13—N9—C15—C14 | 6 (2) |
N11—Ni1—N9—C15 | −177 (2) | Ni1—N9—C15—C14 | −179.2 (16) |
N1—Ni1—N9—C15 | 84 (2) | C18—N11—C16—N12 | −1 (2) |
N3—Ni1—N11—C16 | 172.5 (15) | Ni1—N11—C16—N12 | 174.7 (13) |
N5—Ni1—N11—C16 | −34 (6) | C18—N11—C16—C13 | −176.3 (19) |
N7—Ni1—N11—C16 | −95.9 (15) | Ni1—N11—C16—C13 | −1 (2) |
N9—Ni1—N11—C16 | 1.7 (14) | C17—N12—C16—N11 | 1 (2) |
N1—Ni1—N11—C16 | 91.0 (15) | C17—N12—C16—C13 | 176 (2) |
N3—Ni1—N11—C18 | −15 (2) | N9—C13—C16—N11 | −1 (3) |
N5—Ni1—N11—C18 | 139 (4) | N10—C13—C16—N11 | −171 (2) |
N7—Ni1—N11—C18 | 77 (2) | N9—C13—C16—N12 | −176 (2) |
N9—Ni1—N11—C18 | 175 (2) | N10—C13—C16—N12 | 15 (4) |
N1—Ni1—N11—C18 | −96 (2) | C16—N12—C17—C18 | −1 (2) |
C3—N1—C1—N2 | −1 (2) | N12—C17—C18—N11 | 0 (3) |
Ni1—N1—C1—N2 | 168.2 (14) | C16—N11—C18—C17 | 0 (2) |
C3—N1—C1—C4 | −177.3 (19) | Ni1—N11—C18—C17 | −172.9 (18) |
Ni1—N1—C1—C4 | −8 (2) | C21—N15—C19—O7 | 150 (7) |
C2—N2—C1—N1 | −2 (3) | C20—N15—C19—O7 | −51 (11) |
C2—N2—C1—C4 | 173 (3) | C24—N16—C22—O8 | −153 (6) |
C1—N2—C2—C3 | 5 (3) | C23—N16—C22—O8 | 0 (10) |
C1—N1—C3—C2 | 5 (3) | C27—N17—C25—O9 | −156 (8) |
Ni1—N1—C3—C2 | −160 (2) | C26—N17—C25—O9 | 18 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O5i | 0.86 | 2.19 | 2.93 (2) | 144 |
N2—H2···O4i | 0.86 | 2.30 | 2.98 (2) | 136 |
N4—H4···O1ii | 0.86 | 1.91 | 2.77 (2) | 176 |
N4—H4···O3ii | 0.86 | 2.45 | 3.04 (3) | 127 |
N6—H6···O6 | 0.86 | 2.05 | 2.90 (3) | 171 |
N6—H6···O4 | 0.86 | 2.43 | 3.09 (2) | 133 |
N8—H8···O2iii | 0.86 | 2.09 | 2.82 (3) | 141 |
N8—H8···O3iii | 0.86 | 2.36 | 2.98 (2) | 130 |
N10—H10···O5iv | 0.86 | 2.17 | 2.98 (3) | 156 |
N10—H10···O6iv | 0.86 | 2.45 | 3.16 (2) | 140 |
N12—H12···O2v | 0.86 | 2.29 | 2.97 (2) | 136 |
Symmetry codes: (i) x+1/2, y−1/2, z; (ii) x+1/2, −y+1/2, z+1/2; (iii) x, −y+1, z+1/2; (iv) x+1, y, z; (v) x+1, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C6H6N4)3](NO3)2·C3H7NO |
Mr | 658.27 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 298 |
a, b, c (Å) | 12.2150 (11), 20.864 (2), 12.1080 (12) |
β (°) | 90.528 (1) |
V (Å3) | 3085.6 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.69 |
Crystal size (mm) | 0.36 × 0.19 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2007) |
Tmin, Tmax | 0.788, 0.921 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7496, 4289, 1969 |
Rint | 0.131 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.109, 0.276, 1.06 |
No. of reflections | 4289 |
No. of parameters | 437 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.54, −0.61 |
Absolute structure | Flack (1983), 1549 Friedel pairs |
Absolute structure parameter | 0.00 (6) |
Computer programs: SMART (Bruker, 2007), SAINT-Plus (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O5i | 0.86 | 2.19 | 2.93 (2) | 144.3 |
N2—H2···O4i | 0.86 | 2.30 | 2.98 (2) | 136.3 |
N4—H4···O1ii | 0.86 | 1.91 | 2.77 (2) | 175.8 |
N4—H4···O3ii | 0.86 | 2.45 | 3.04 (3) | 126.7 |
N6—H6···O6 | 0.86 | 2.05 | 2.90 (3) | 171.2 |
N6—H6···O4 | 0.86 | 2.43 | 3.09 (2) | 133.2 |
N8—H8···O2iii | 0.86 | 2.09 | 2.82 (3) | 141.3 |
N8—H8···O3iii | 0.86 | 2.36 | 2.98 (2) | 129.9 |
N10—H10···O5iv | 0.86 | 2.17 | 2.98 (3) | 155.5 |
N10—H10···O6iv | 0.86 | 2.45 | 3.16 (2) | 140.0 |
N12—H12···O2v | 0.86 | 2.29 | 2.97 (2) | 135.9 |
Symmetry codes: (i) x+1/2, y−1/2, z; (ii) x+1/2, −y+1/2, z+1/2; (iii) x, −y+1, z+1/2; (iv) x+1, y, z; (v) x+1, −y+1, z+1/2. |
Acknowledgements
This work has been supported by the National Natural Science Foundation of China (grant No. 21171119), the National Keystone Basic Research Program (973 Program) under grant Nos. 2007CB310408 and 2006CB302901, and the Funding Project for Academic Human Resources Development in Institutions of Higher Learning Under the Jurisdiction of the Beijing Municipality Program for Excellent Talents of Beijing City (grant No. 2010D005016000002).
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2,2'-Biimidazole is an excellent candidate for building a supramolecular structure involving directed hydrogen bonding interactions (Dai et al., 2010; Ding et al., 2005; Gruia et al., 2007; Jin et al., 2010; Yang et al., 2005). This versatile molecule can act as a non-deprotonated, mono-deprotonated or bis-deprotonated ligand (Martinez Lorente et al., 1995). Furthermore, the uncoordinated N—H groups in H2biim can participate in various patterns of hydrogen bonds with other acceptors. This may provides useful information to understand the complicated process in biological systems (Gruia et al., 2007; Ding et al., 2005). Herein we report the compound [Ni(H2biim)3(NO3)2].C3H7NO.
The asymmetry unit of the title compound consists of one [Ni(H2biim)3]2+ cation,two nitrate anions and one free N,N-dimethyl formamide molecule(Fig.1). The complex is monoclinic in Cc space group. In the title complex, the metal center allows the formation of a distorted octahedral geometry with six nitrogen atoms of three chelating H2biim ligands. The compound contains three bidentate H2biim ligands which provide six external N—H groups, which form hyfrogen bonds with the O atoms of NO3- anions to generate an extended hydrogen-bonded three-dimensional structure (Fig.2).
In [Ni(H2biim)3(NO3)2].C3H7NO, the Ni—N bond lengths are in the range 2.005 (2)–2.106 (2) Å, which agree with those in the compound [Ni(C6H6N4)3](C8H4O4) (C8H4O4 = phthalate dianions)(Yang et al., 2005). The distorted N—Ni—N bite angles of H2biim ligands [N3—Ni1—N1 = 81.1 (7)°, N5—Ni1—N7 = 81.6 (8)°, N9—Ni1—N11 = 80.2 (8)°] agree with the corresponding angles for [Ni(H2biim)3]2+ complexes (Yang et al., 2005). The hydrogen bonds are formed between the N—H donors of H2biim and the oxygen atoms from NO3- (O4 and O5), with d(N2···O4) = 2.979 Å, d(N2···O5) = 2.930 Å, N2—H2···O4 =136.28° and N2—H2···O5 = 144.29°.
It is interesting that the solvated DMF did not come from the starting materials. This phenomena also appeared in other similar reactions of H2biim with metal salts in the solvent CH3OH and H2O.