inorganic compounds
A sodium calcium arsenate, NaCa(AsO4)
aDepartment of Geological Sciences, University of Saskatchewan, Saskatoon, SK, Canada S7N 5E2, and bDepartment of Materials Science and Engineering, College of Materials, Xiamen University, Xiamen 361005, Fujian Province, People's Republic of China
*Correspondence e-mail: yuanming.pan@usask.ca
The title compound, NaCa(AsO4), was synthesized using a hydrothermal method at 633–643 K. It has a dense structure composed of alternating layers of distorted [CaO6] octahedra and layers of [AsO4] tetrahedra and distorted [NaO6] octahedra, stacked along the a axis. The As, Ca and two O atoms lie on the mirror plane at y = 1/4 (i.e. 4c), while the Na atom lies on an inversion centre (1/2, 1/2, 0) (i.e. 4b). Each distorted [CaO6] octahedron shares four equatorial common O vertices with four neighboring octahedra, forming a layer parallel to (100), whereas each distorted [NaO6] octahedron shares two opposite edges with two neighboring ones, forming a chain running along [010]. Each isolated [AsO4] tetrahedron shares two edges with two different [NaO6] octahedra in one [NaO6] chain and a vertex with another chain. Simultaneously the above [AsO4] tetrahedron located in a four-membered [CaO6] ring shares one edge of its base facet with one [CaO6] octahedron and three corners with three other [CaO6] octahedra of one [CaO6] layer, and the remaining apex is shared with another [CaO6] layer. [NaO6] octahedra and [CaO6] octahedra are linked to each other by sharing edges and vertices.
Related literature
For general background, see: Smedley & Kinniburgh (2002); Zhu et al. (2006); Rodríguez et al. (2008). For related structures, see: Graia et al. (1999) for CaNa2(AsO4)3; IJdo (1982) for NaCa(VO4); Ben Amara et al. (1983) for buchwaldite, NaCa(PO4); Bredig (1942) for NaCa(PO4).
Experimental
Crystal data
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2011) and ATOMS (Dowty, 2004); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S160053681104428X/br2179sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053681104428X/br2179Isup2.hkl
Single crystals of NaCa(AsO4) were synthesized using a hydrothermal method. A mixture of 0.5 mmol calcium nitrate Ca(NO3)2.H2O and 0.3 mmol sodium hydrogen arsenate heptahydrate Na2HAsO4.H2O was added to 5 ml of 2M NaOH solution. This mixed solution was then transferred into a 22 ml pressure vessel from Parr Instrument Company and heated to and maintained at a temperature of 633–643 K for 13 days. Solid products were filtered, washed with deionized water, and dried in the air. Crystals with a rectangular morphology were selected with a polarizing microscope for the collection of single-crystal X-ray diffraction data at 173 K.
Arsenic, a highly toxic pollutant in surface and ground waters, poses serious health and environmental problems all around the world (Smedley & Kinniburgh, 2002). One common method for immobilization and remediation of arsenic contamination in aqueous environments is through co-precipitation with calcium by forming various Ca-arsenate compounds (Zhu et al., 2006). To date, more than 20 Ca-arsenate compounds have been reported, but only a few of them have their crystal structures determined (Rodríguez et al., 2008). Knowledge about the crystal structures of Ca-arsenate compounds is important for better understanding their stabilities and potential applications for remediation of arsenic contamination in aqueous environments. Herein we report on the hydrothermal synthesis and
of a new compound NaCa(AsO4), which is the second sodium calcium arsenate after CaNa2(AsO4)3 (Graia et al., 1999).The
of the title compound differs from those of its phosphorus and vanadium counterparts (IJdo, 1982; Ben Amara et al., 1983 & Bredig, 1942). The basic structural features of the title compound include [NaO6] octahedra, [AsO4] tetrahedra and [CaO6] octahedra. Sodium atoms are surrounded by six O-atoms forming distorted [NaO6] octahedra, which share edges to form chains running along [010] (Fig. 1–2). These octahedral chains are linked by isolated [AsO4] tetrahedra to form polyhedral sheets parallel to the (100) plane (Fig. 2). This linkage is made by each [AsO4] tetrahedron sharing edges with two [NaO6] octahedra in one chain and a vertex with another chain. These sheets are then linked together by [CaO6] octahedra via sharing edges and vertices(Fig. 1–3).For general background, see: Smedley & Kinniburgh (2002); Zhu et al. (2006); Rodríguez et al. (2008). For related structures, see: Graia et al. (1999) for CaNa2(AsO4)3; IJdo (1982) for NaCa(VO4); Ben Amara et al. (1983) for buchwaldite, NaCa(PO4); Bredig (1942) for NaCa(PO4).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2011) and ATOMS (Dowty, 2004); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).NaCa(AsO4) | F(000) = 384 |
Mr = 201.99 | Dx = 3.346 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 2163 reflections |
a = 11.486 (2) Å | θ = 3.6–28.2° |
b = 6.6615 (14) Å | µ = 9.73 mm−1 |
c = 5.2406 (11) Å | T = 173 K |
V = 400.97 (15) Å3 | Prism, colorless |
Z = 4 | 0.18 × 0.12 × 0.10 mm |
Bruker SMART CCD area-detector diffractometer | 505 independent reflections |
Radiation source: fine-focus sealed tube | 498 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
1200 images,Δω=1°, Exp time: 15 s. scans | θmax = 28.2°, θmin = 3.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −15→14 |
Tmin = 0.273, Tmax = 0.443 | k = −5→8 |
2163 measured reflections | l = −6→6 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.021 | w = 1/[σ2(Fo2) + (0.0474P)2 + 0.5926P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.067 | (Δ/σ)max = 0.001 |
S = 1.03 | Δρmax = 0.83 e Å−3 |
505 reflections | Δρmin = −0.74 e Å−3 |
42 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.017 (2) |
NaCa(AsO4) | V = 400.97 (15) Å3 |
Mr = 201.99 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 11.486 (2) Å | µ = 9.73 mm−1 |
b = 6.6615 (14) Å | T = 173 K |
c = 5.2406 (11) Å | 0.18 × 0.12 × 0.10 mm |
Bruker SMART CCD area-detector diffractometer | 505 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 498 reflections with I > 2σ(I) |
Tmin = 0.273, Tmax = 0.443 | Rint = 0.035 |
2163 measured reflections |
R[F2 > 2σ(F2)] = 0.021 | 42 parameters |
wR(F2) = 0.067 | 0 restraints |
S = 1.03 | Δρmax = 0.83 e Å−3 |
505 reflections | Δρmin = −0.74 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
As1 | 0.59797 (3) | 0.2500 | 0.56866 (7) | 0.0046 (2) | |
Na1 | 0.5000 | 0.5000 | 0.0000 | 0.0088 (3) | |
Ca1 | 0.28059 (6) | 0.2500 | 0.49344 (14) | 0.0053 (2) | |
O1 | 0.4611 (2) | 0.2500 | 0.6849 (5) | 0.0075 (5) | |
O2 | 0.6038 (2) | 0.2500 | 0.2482 (6) | 0.0068 (6) | |
O3 | 0.66769 (14) | 0.0513 (3) | 0.7038 (3) | 0.0068 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
As1 | 0.0014 (3) | 0.0050 (3) | 0.0073 (3) | 0.000 | 0.00013 (11) | 0.000 |
Na1 | 0.0076 (7) | 0.0087 (7) | 0.0101 (7) | 0.0027 (6) | −0.0003 (6) | −0.0014 (6) |
Ca1 | 0.0017 (4) | 0.0051 (4) | 0.0091 (4) | 0.000 | −0.0002 (2) | 0.000 |
O1 | 0.0017 (10) | 0.0096 (12) | 0.0111 (12) | 0.000 | 0.0023 (9) | 0.000 |
O2 | 0.0042 (12) | 0.0100 (13) | 0.0062 (13) | 0.000 | 0.0012 (8) | 0.000 |
O3 | 0.0056 (8) | 0.0048 (8) | 0.0099 (8) | 0.0014 (6) | −0.0024 (7) | 0.0000 (7) |
As1—O2 | 1.681 (3) | Na1—O3v | 2.4970 (18) |
As1—O1 | 1.686 (2) | Na1—O3vi | 2.4970 (18) |
As1—O3i | 1.7015 (17) | Ca1—O1 | 2.304 (3) |
As1—O3 | 1.7015 (17) | Ca1—O3vi | 2.3346 (19) |
Na1—O1ii | 2.3873 (19) | Ca1—O3vii | 2.3346 (19) |
Na1—O1iii | 2.3874 (19) | Ca1—O2viii | 2.393 (3) |
Na1—O2 | 2.426 (2) | Ca1—O3ix | 2.4393 (19) |
Na1—O2iv | 2.426 (2) | Ca1—O3x | 2.4393 (19) |
O2—As1—O1 | 113.48 (12) | O2iv—Na1—O3vi | 81.96 (8) |
O2—As1—O3i | 113.41 (8) | O1—Ca1—O3vi | 87.93 (6) |
O1—As1—O3i | 106.76 (8) | O1—Ca1—O3vii | 87.93 (6) |
O2—As1—O3 | 113.41 (8) | O3vi—Ca1—O3vii | 118.57 (10) |
O1—As1—O3 | 106.76 (8) | O1—Ca1—O2viii | 173.87 (10) |
O3i—As1—O3 | 102.14 (12) | O3vi—Ca1—O2viii | 88.94 (6) |
O1ii—Na1—O2 | 89.08 (7) | O3vii—Ca1—O2viii | 88.94 (6) |
O1iii—Na1—O2 | 90.92 (7) | O1—Ca1—O3ix | 101.26 (7) |
O1ii—Na1—O2iv | 90.92 (7) | O3vi—Ca1—O3ix | 87.52 (4) |
O1iii—Na1—O2iv | 89.08 (7) | O3vii—Ca1—O3ix | 152.85 (7) |
O1ii—Na1—O3v | 67.60 (7) | O2viii—Ca1—O3ix | 83.86 (7) |
O1iii—Na1—O3v | 112.40 (7) | O1—Ca1—O3x | 101.26 (7) |
O2—Na1—O3v | 81.96 (8) | O3vi—Ca1—O3x | 152.85 (7) |
O2iv—Na1—O3v | 98.04 (8) | O3vii—Ca1—O3x | 87.52 (4) |
O1ii—Na1—O3vi | 112.40 (7) | O2viii—Ca1—O3x | 83.86 (7) |
O1iii—Na1—O3vi | 67.60 (7) | O3ix—Ca1—O3x | 65.72 (8) |
O2—Na1—O3vi | 98.04 (8) |
Symmetry codes: (i) x, −y+1/2, z; (ii) x, y, z−1; (iii) −x+1, −y+1, −z+1; (iv) −x+1, −y+1, −z; (v) x, −y+1/2, z−1; (vi) −x+1, y+1/2, −z+1; (vii) −x+1, −y, −z+1; (viii) x−1/2, y, −z+1/2; (ix) x−1/2, −y+1/2, −z+3/2; (x) x−1/2, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | NaCa(AsO4) |
Mr | 201.99 |
Crystal system, space group | Orthorhombic, Pnma |
Temperature (K) | 173 |
a, b, c (Å) | 11.486 (2), 6.6615 (14), 5.2406 (11) |
V (Å3) | 400.97 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 9.73 |
Crystal size (mm) | 0.18 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.273, 0.443 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2163, 505, 498 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.664 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.021, 0.067, 1.03 |
No. of reflections | 505 |
No. of parameters | 42 |
Δρmax, Δρmin (e Å−3) | 0.83, −0.74 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2011) and ATOMS (Dowty, 2004).
Acknowledgements
This project was supported by the fund from the Natural Science and Engineering Research Council (NSERC) of Canada.
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Arsenic, a highly toxic pollutant in surface and ground waters, poses serious health and environmental problems all around the world (Smedley & Kinniburgh, 2002). One common method for immobilization and remediation of arsenic contamination in aqueous environments is through co-precipitation with calcium by forming various Ca-arsenate compounds (Zhu et al., 2006). To date, more than 20 Ca-arsenate compounds have been reported, but only a few of them have their crystal structures determined (Rodríguez et al., 2008). Knowledge about the crystal structures of Ca-arsenate compounds is important for better understanding their stabilities and potential applications for remediation of arsenic contamination in aqueous environments. Herein we report on the hydrothermal synthesis and crystal structure of a new compound NaCa(AsO4), which is the second sodium calcium arsenate after CaNa2(AsO4)3 (Graia et al., 1999).
The crystal structure of the title compound differs from those of its phosphorus and vanadium counterparts (IJdo, 1982; Ben Amara et al., 1983 & Bredig, 1942). The basic structural features of the title compound include [NaO6] octahedra, [AsO4] tetrahedra and [CaO6] octahedra. Sodium atoms are surrounded by six O-atoms forming distorted [NaO6] octahedra, which share edges to form chains running along [010] (Fig. 1–2). These octahedral chains are linked by isolated [AsO4] tetrahedra to form polyhedral sheets parallel to the (100) plane (Fig. 2). This linkage is made by each [AsO4] tetrahedron sharing edges with two [NaO6] octahedra in one chain and a vertex with another chain. These sheets are then linked together by [CaO6] octahedra via sharing edges and vertices(Fig. 1–3).