metal-organic compounds
1-[(Ferrocen-1-yl)methyl]-3-(naphthalen-1-yl)thiourea
aDepartment of Chemistry and Chemical Engineering, Henan University of Urban Construction, Pingdingshan, Henan 467044, People's Republic of China
*Correspondence e-mail: lixia@hncj.edu.cn
In the title compound, [Fe(C5H5)(C17H15N2S)], the cyclopentadienyl (Cp) rings are almost parallel and essentially eclipsed, with a dihedral angle between the Cp ring planes of 0.807 (11)°. The Fe atom is slightly closer to the substituted cyclopentadienyl ring, with an Fe–centroid distance of 1.6510 (8) Å, compared with 1.6597 (8) Å for the unsubstituted ring. The bridging unit between the substituted Cp ring and the naphthyl ring system is planar within 0.0174 Å and makes dihedral angles of 59.032 (10) and 66.02 (2)°, respectively, with these two rings. The angle between the substituted Cp ring and the naphthyl ring system is 72.094 (18)°. The H atoms of the NH groups of the thiourea moiety are positioned anti with respect to each other. In the crystal, molecules form centrosymmetric dimers via pairs of N—H⋯S hydrogen bonds.
Related literature
For applications of thiourea in the field of medicine, see: Di Grandi et al. (2004); Suh et al. (2005); Kaymakcioglu et al. (2005); Han et al. (2006), in bioorganic chemistry, see: Rostom (2006) and in supramolecular chemistry, see: Henderson et al. (2001); Heck & Marsura (2003).
Experimental
Crystal data
|
Refinement
|
Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536811046629/fj2464sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811046629/fj2464Isup2.hkl
To a solution of (ferrocene-1-yl)methanamine (1.075 g, 5 mmol) in MeOH (30 ml), 1-naphthyl isothiocyanate (0.925 g, 5 mmol) was added. The reaction mixture was stirred at room temperature for 12 h. The resulting solution was concentrated to about 10 ml and then cooled at ice-bath. The yellow precipitate was collected by filtration and washed with Ether several times. The crude product was purified by recrystallization from CH2Cl2 / MeOH to give 1-((ferroecen-1-yl)methyl)-3-(naphthalen-1-yl)thiourea as yellow block crystals.
H atoms on both the N and C atoms were positioned geometrically with N—H = 0.86 Å, C—H = 0.93 and 0.97 Å for aromatic and methyl H, and constrained to ride on their parent atoms with Uiso(H)= 1.2Ueq(parent atom).
Thiourea and its derivatives have attracted great attention because of their potential applications in the field of medicine (Di Grandi et al., 2004; Suh et al., 2005; Kaymakcioglu et al., 2005; Han et al., 2006), bioorganic (Rostom et al., 2006) and supramolecular chemistry (Henderson et al., 2001; Heck et al., 2003). Detailed information on their molecular and crystal structures is necessary to understand their biologic activity and coordination possibility. Here we want to report the
of a new ferrocene-containing thiourea, 1-((ferroecen-1-yl)methyl)-3-(naphthalen-1-yl)thiourea.The molecular structure of the title compound is composed of a (ferroecen-1-yl)methyl group and a naphthalen group joined by an organic thiourea spacer. The Fe—C bond distances within the ferrocene group are in the range of 2.043 (3)–2.048 (3) Å for the substituted cyclopentadienyl (Cp) ring [C1—C5] and 2.033 (3)–2.048 (3) Å for the unsubstituted Cp ring [C6—C10]. The Cp rings are almost parallel and are essentially eclipsed, and the dihedral angle between the Cp ring planes is 0.807 (11) °. The Fe atom is slightly closer to the substituted cyclopentadienyl ring, with a Fe-centroid distance of 1.6510 (8) Å, compared with 1.6597 (8) Å for the unsubstituted ring. The bridging unit between the substituted Cp ring and naphthyl rings is planar within 0.0174 Å and makes dihedral angles of 59.032 (10) ° and 66.019 (21) °, respectively, with these two rings, while the angle between the substituted Cp ring and naphthyl rings is 72.094 (18) °. The H atoms of the NH groups of thiourea are positioned anti to each other. In the crystal, the molecules form centrosymmetric dimers via intermolecular N—H···S hydrogen bonds.
For applications of thiourea in the field of medicine, see: Di Grandi et al. (2004); Suh et al. (2005); Kaymakcioglu et al. (2005); Han et al. (2006), in bioorganic chemistry, see: Rostom (2006) and in supramolecular chemistry, see: Henderson et al. (2001); Heck & Marsura (2003).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, showing the atomic numbering and 30% probability displacement ellipsoids. |
[Fe(C5H5)(C17H15N2S)] | V = 939.1 (7) Å3 |
Mr = 400.31 | Z = 2 |
Triclinic, P1 | F(000) = 416 |
Hall symbol: -P 1 | Dx = 1.416 Mg m−3 |
a = 7.958 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.890 (5) Å | θ = 1.8–28.2° |
c = 12.357 (5) Å | µ = 0.92 mm−1 |
α = 66.886 (6)° | T = 296 K |
β = 78.637 (8)° | Block, orange |
γ = 73.306 (8)° | 0.39 × 0.24 × 0.16 mm |
Bruker SMART CCD area-detector diffractometer | 3645 independent reflections |
Radiation source: fine-focus sealed tube | 2741 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
phi and ω scans | θmax = 26.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −9→9 |
Tmin = 0.755, Tmax = 0.867 | k = −9→13 |
5178 measured reflections | l = −14→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0467P)2 + 0.1883P] where P = (Fo2 + 2Fc2)/3 |
3645 reflections | (Δ/σ)max < 0.001 |
241 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
[Fe(C5H5)(C17H15N2S)] | γ = 73.306 (8)° |
Mr = 400.31 | V = 939.1 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.958 (3) Å | Mo Kα radiation |
b = 10.890 (5) Å | µ = 0.92 mm−1 |
c = 12.357 (5) Å | T = 296 K |
α = 66.886 (6)° | 0.39 × 0.24 × 0.16 mm |
β = 78.637 (8)° |
Bruker SMART CCD area-detector diffractometer | 3645 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 2741 reflections with I > 2σ(I) |
Tmin = 0.755, Tmax = 0.867 | Rint = 0.018 |
5178 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.35 e Å−3 |
3645 reflections | Δρmin = −0.32 e Å−3 |
241 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Fe1 | 0.28952 (5) | 0.28154 (4) | 0.44361 (3) | 0.04797 (15) | |
S1 | 0.81798 (10) | 0.59967 (7) | 0.11000 (7) | 0.0553 (2) | |
N1 | 0.6093 (3) | 0.4257 (2) | 0.2183 (2) | 0.0559 (7) | |
N2 | 0.8196 (3) | 0.3739 (2) | 0.0768 (2) | 0.0513 (6) | |
C1 | 0.4345 (4) | 0.4236 (3) | 0.4046 (2) | 0.0500 (7) | |
C2 | 0.2684 (4) | 0.4629 (3) | 0.4647 (3) | 0.0558 (7) | |
H2 | 0.1844 | 0.5443 | 0.4358 | 0.067* | |
C3 | 0.2523 (5) | 0.3575 (3) | 0.5759 (3) | 0.0645 (8) | |
H3 | 0.1556 | 0.3570 | 0.6322 | 0.077* | |
C4 | 0.4083 (5) | 0.2533 (4) | 0.5866 (3) | 0.0689 (9) | |
H4 | 0.4326 | 0.1721 | 0.6512 | 0.083* | |
C5 | 0.5222 (4) | 0.2936 (3) | 0.4814 (3) | 0.0602 (8) | |
H5 | 0.6343 | 0.2438 | 0.4655 | 0.072* | |
C6 | 0.2304 (5) | 0.2825 (4) | 0.2899 (3) | 0.0716 (9) | |
H6 | 0.2558 | 0.3436 | 0.2146 | 0.086* | |
C7 | 0.0759 (4) | 0.3020 (4) | 0.3636 (3) | 0.0747 (10) | |
H7 | −0.0190 | 0.3778 | 0.3458 | 0.090* | |
C8 | 0.0883 (6) | 0.1880 (5) | 0.4690 (4) | 0.0851 (12) | |
H8 | 0.0040 | 0.1739 | 0.5338 | 0.102* | |
C9 | 0.2543 (6) | 0.0979 (4) | 0.4579 (4) | 0.0871 (12) | |
H9 | 0.2987 | 0.0137 | 0.5147 | 0.104* | |
C10 | 0.3395 (5) | 0.1579 (4) | 0.3468 (4) | 0.0780 (10) | |
H10 | 0.4501 | 0.1204 | 0.3166 | 0.094* | |
C11 | 0.5046 (4) | 0.5097 (3) | 0.2864 (3) | 0.0634 (8) | |
H11A | 0.4071 | 0.5746 | 0.2429 | 0.076* | |
H11B | 0.5770 | 0.5615 | 0.2968 | 0.076* | |
C12 | 0.7436 (3) | 0.4578 (3) | 0.1373 (2) | 0.0433 (6) | |
C13 | 0.7688 (3) | 0.2533 (3) | 0.0865 (2) | 0.0445 (6) | |
C14 | 0.6119 (4) | 0.2638 (3) | 0.0504 (3) | 0.0550 (7) | |
H14 | 0.5362 | 0.3497 | 0.0215 | 0.066* | |
C15 | 0.5630 (4) | 0.1469 (4) | 0.0563 (3) | 0.0646 (9) | |
H15 | 0.4541 | 0.1553 | 0.0340 | 0.078* | |
C16 | 0.6750 (4) | 0.0220 (4) | 0.0946 (3) | 0.0623 (8) | |
H16 | 0.6429 | −0.0546 | 0.0968 | 0.075* | |
C17 | 0.8410 (4) | 0.0057 (3) | 0.1316 (2) | 0.0492 (7) | |
C18 | 0.9628 (5) | −0.1220 (3) | 0.1691 (3) | 0.0666 (9) | |
H18 | 0.9360 | −0.1994 | 0.1686 | 0.080* | |
C19 | 1.1183 (5) | −0.1343 (3) | 0.2060 (3) | 0.0779 (10) | |
H19 | 1.1966 | −0.2198 | 0.2303 | 0.093* | |
C20 | 1.1618 (4) | −0.0202 (4) | 0.2079 (3) | 0.0700 (9) | |
H20 | 1.2678 | −0.0305 | 0.2351 | 0.084* | |
C21 | 1.0513 (4) | 0.1059 (3) | 0.1705 (3) | 0.0562 (7) | |
H21 | 1.0828 | 0.1814 | 0.1714 | 0.067* | |
C22 | 0.8878 (3) | 0.1236 (3) | 0.1299 (2) | 0.0426 (6) | |
H1A | 0.577 (4) | 0.357 (3) | 0.230 (2) | 0.051* | |
H2A | 0.921 (4) | 0.389 (3) | 0.033 (2) | 0.051* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Fe1 | 0.0496 (2) | 0.0505 (3) | 0.0520 (3) | −0.01930 (18) | −0.00125 (18) | −0.02317 (19) |
S1 | 0.0595 (4) | 0.0442 (4) | 0.0712 (5) | −0.0267 (3) | 0.0129 (4) | −0.0287 (4) |
N1 | 0.0636 (15) | 0.0482 (14) | 0.0679 (16) | −0.0311 (12) | 0.0227 (12) | −0.0341 (13) |
N2 | 0.0472 (13) | 0.0477 (14) | 0.0668 (16) | −0.0240 (11) | 0.0165 (11) | −0.0298 (12) |
C1 | 0.0560 (16) | 0.0482 (16) | 0.0578 (17) | −0.0207 (13) | 0.0047 (13) | −0.0301 (14) |
C2 | 0.0613 (18) | 0.0536 (17) | 0.0584 (18) | −0.0166 (14) | 0.0067 (14) | −0.0298 (15) |
C3 | 0.074 (2) | 0.076 (2) | 0.0555 (19) | −0.0343 (18) | 0.0120 (16) | −0.0334 (17) |
C4 | 0.091 (3) | 0.072 (2) | 0.0521 (19) | −0.0320 (19) | −0.0182 (18) | −0.0162 (17) |
C5 | 0.0537 (17) | 0.063 (2) | 0.078 (2) | −0.0135 (14) | −0.0135 (16) | −0.0362 (17) |
C6 | 0.083 (2) | 0.090 (3) | 0.063 (2) | −0.039 (2) | −0.0065 (19) | −0.036 (2) |
C7 | 0.058 (2) | 0.089 (3) | 0.096 (3) | −0.0177 (18) | −0.0148 (19) | −0.049 (2) |
C8 | 0.087 (3) | 0.119 (3) | 0.081 (3) | −0.069 (3) | 0.015 (2) | −0.048 (3) |
C9 | 0.113 (3) | 0.055 (2) | 0.107 (3) | −0.035 (2) | −0.040 (3) | −0.019 (2) |
C10 | 0.076 (2) | 0.086 (3) | 0.104 (3) | −0.026 (2) | −0.004 (2) | −0.064 (3) |
C11 | 0.076 (2) | 0.0511 (18) | 0.070 (2) | −0.0252 (15) | 0.0233 (16) | −0.0351 (16) |
C12 | 0.0441 (14) | 0.0395 (14) | 0.0496 (15) | −0.0149 (11) | −0.0004 (12) | −0.0178 (12) |
C13 | 0.0486 (15) | 0.0469 (15) | 0.0494 (15) | −0.0234 (12) | 0.0082 (12) | −0.0267 (13) |
C14 | 0.0532 (17) | 0.0577 (18) | 0.0621 (18) | −0.0174 (14) | −0.0050 (14) | −0.0269 (15) |
C15 | 0.0611 (19) | 0.088 (3) | 0.068 (2) | −0.0358 (18) | 0.0002 (16) | −0.0422 (19) |
C16 | 0.079 (2) | 0.072 (2) | 0.0627 (19) | −0.0482 (18) | 0.0104 (16) | −0.0378 (17) |
C17 | 0.0658 (18) | 0.0450 (16) | 0.0458 (15) | −0.0278 (14) | 0.0115 (13) | −0.0232 (13) |
C18 | 0.097 (3) | 0.0452 (18) | 0.0589 (19) | −0.0302 (17) | 0.0167 (18) | −0.0212 (15) |
C19 | 0.090 (3) | 0.0484 (19) | 0.074 (2) | −0.0020 (18) | 0.003 (2) | −0.0143 (17) |
C20 | 0.0595 (19) | 0.067 (2) | 0.075 (2) | −0.0083 (16) | −0.0095 (17) | −0.0198 (18) |
C21 | 0.0570 (17) | 0.0568 (18) | 0.0623 (18) | −0.0237 (14) | 0.0004 (14) | −0.0247 (15) |
C22 | 0.0479 (15) | 0.0470 (15) | 0.0425 (14) | −0.0238 (12) | 0.0093 (12) | −0.0233 (12) |
Fe1—C9 | 2.033 (3) | C6—H6 | 0.9300 |
Fe1—C6 | 2.040 (3) | C7—C8 | 1.400 (5) |
Fe1—C10 | 2.042 (3) | C7—H7 | 0.9300 |
Fe1—C4 | 2.043 (3) | C8—C9 | 1.420 (6) |
Fe1—C3 | 2.043 (3) | C8—H8 | 0.9300 |
Fe1—C1 | 2.044 (3) | C9—C10 | 1.398 (5) |
Fe1—C7 | 2.046 (3) | C9—H9 | 0.9300 |
Fe1—C8 | 2.047 (3) | C10—H10 | 0.9300 |
Fe1—C5 | 2.047 (3) | C11—H11A | 0.9700 |
Fe1—C2 | 2.048 (3) | C11—H11B | 0.9700 |
S1—C12 | 1.699 (3) | C13—C14 | 1.366 (4) |
N1—C12 | 1.336 (3) | C13—C22 | 1.420 (4) |
N1—C11 | 1.458 (3) | C14—C15 | 1.407 (4) |
N1—H1A | 0.81 (3) | C14—H14 | 0.9300 |
N2—C12 | 1.342 (3) | C15—C16 | 1.354 (5) |
N2—C13 | 1.437 (3) | C15—H15 | 0.9300 |
N2—H2A | 0.90 (3) | C16—C17 | 1.423 (4) |
C1—C2 | 1.421 (4) | C16—H16 | 0.9300 |
C1—C5 | 1.425 (4) | C17—C18 | 1.409 (4) |
C1—C11 | 1.493 (4) | C17—C22 | 1.428 (3) |
C2—C3 | 1.414 (4) | C18—C19 | 1.355 (5) |
C2—H2 | 0.9300 | C18—H18 | 0.9300 |
C3—C4 | 1.409 (5) | C19—C20 | 1.393 (5) |
C3—H3 | 0.9300 | C19—H19 | 0.9300 |
C4—C5 | 1.421 (4) | C20—C21 | 1.357 (4) |
C4—H4 | 0.9300 | C20—H20 | 0.9300 |
C5—H5 | 0.9300 | C21—C22 | 1.421 (4) |
C6—C10 | 1.380 (5) | C21—H21 | 0.9300 |
C6—C7 | 1.396 (5) | ||
C9—Fe1—C6 | 66.95 (16) | C4—C5—C1 | 108.0 (3) |
C9—Fe1—C10 | 40.13 (16) | C4—C5—Fe1 | 69.49 (17) |
C6—Fe1—C10 | 39.51 (14) | C1—C5—Fe1 | 69.49 (16) |
C9—Fe1—C4 | 108.65 (15) | C4—C5—H5 | 126.0 |
C6—Fe1—C4 | 165.75 (15) | C1—C5—H5 | 126.0 |
C10—Fe1—C4 | 128.50 (16) | Fe1—C5—H5 | 126.6 |
C9—Fe1—C3 | 127.08 (16) | C10—C6—C7 | 108.9 (3) |
C6—Fe1—C3 | 153.19 (15) | C10—C6—Fe1 | 70.3 (2) |
C10—Fe1—C3 | 165.09 (16) | C7—C6—Fe1 | 70.26 (19) |
C4—Fe1—C3 | 40.33 (13) | C10—C6—H6 | 125.6 |
C9—Fe1—C1 | 154.07 (16) | C7—C6—H6 | 125.6 |
C6—Fe1—C1 | 109.02 (13) | Fe1—C6—H6 | 125.4 |
C10—Fe1—C1 | 120.19 (14) | C6—C7—C8 | 108.3 (4) |
C4—Fe1—C1 | 68.58 (12) | C6—C7—Fe1 | 69.80 (19) |
C3—Fe1—C1 | 68.53 (12) | C8—C7—Fe1 | 70.0 (2) |
C9—Fe1—C7 | 67.36 (16) | C6—C7—H7 | 125.8 |
C6—Fe1—C7 | 39.94 (13) | C8—C7—H7 | 125.8 |
C10—Fe1—C7 | 67.04 (15) | Fe1—C7—H7 | 125.9 |
C4—Fe1—C7 | 152.63 (15) | C7—C8—C9 | 106.7 (3) |
C3—Fe1—C7 | 118.87 (14) | C7—C8—Fe1 | 69.98 (19) |
C1—Fe1—C7 | 127.19 (14) | C9—C8—Fe1 | 69.1 (2) |
C9—Fe1—C8 | 40.73 (16) | C7—C8—H8 | 126.6 |
C6—Fe1—C8 | 67.34 (15) | C9—C8—H8 | 126.6 |
C10—Fe1—C8 | 67.84 (15) | Fe1—C8—H8 | 125.8 |
C4—Fe1—C8 | 118.94 (15) | C10—C9—C8 | 108.1 (4) |
C3—Fe1—C8 | 107.16 (14) | C10—C9—Fe1 | 70.29 (19) |
C1—Fe1—C8 | 163.82 (16) | C8—C9—Fe1 | 70.2 (2) |
C7—Fe1—C8 | 39.99 (15) | C10—C9—H9 | 125.9 |
C9—Fe1—C5 | 120.16 (15) | C8—C9—H9 | 125.9 |
C6—Fe1—C5 | 128.50 (13) | Fe1—C9—H9 | 125.2 |
C10—Fe1—C5 | 109.68 (14) | C6—C10—C9 | 108.0 (4) |
C4—Fe1—C5 | 40.66 (13) | C6—C10—Fe1 | 70.17 (19) |
C3—Fe1—C5 | 68.15 (13) | C9—C10—Fe1 | 69.6 (2) |
C1—Fe1—C5 | 40.76 (12) | C6—C10—H10 | 126.0 |
C7—Fe1—C5 | 165.29 (15) | C9—C10—H10 | 126.0 |
C8—Fe1—C5 | 153.72 (17) | Fe1—C10—H10 | 125.8 |
C9—Fe1—C2 | 164.22 (17) | N1—C11—C1 | 111.5 (2) |
C6—Fe1—C2 | 120.10 (14) | N1—C11—H11A | 109.3 |
C10—Fe1—C2 | 153.81 (15) | C1—C11—H11A | 109.3 |
C4—Fe1—C2 | 67.90 (13) | N1—C11—H11B | 109.3 |
C3—Fe1—C2 | 40.44 (12) | C1—C11—H11B | 109.3 |
C1—Fe1—C2 | 40.65 (11) | H11A—C11—H11B | 108.0 |
C7—Fe1—C2 | 108.15 (14) | N1—C12—N2 | 117.7 (2) |
C8—Fe1—C2 | 126.17 (15) | N1—C12—S1 | 122.01 (19) |
C5—Fe1—C2 | 68.03 (12) | N2—C12—S1 | 120.24 (19) |
C12—N1—C11 | 125.0 (2) | C14—C13—C22 | 120.7 (2) |
C12—N1—H1A | 120 (2) | C14—C13—N2 | 120.6 (3) |
C11—N1—H1A | 115 (2) | C22—C13—N2 | 118.7 (2) |
C12—N2—C13 | 127.0 (2) | C13—C14—C15 | 121.1 (3) |
C12—N2—H2A | 115.8 (17) | C13—C14—H14 | 119.4 |
C13—N2—H2A | 116.7 (17) | C15—C14—H14 | 119.4 |
C2—C1—C5 | 107.2 (3) | C16—C15—C14 | 119.8 (3) |
C2—C1—C11 | 125.1 (3) | C16—C15—H15 | 120.1 |
C5—C1—C11 | 127.6 (3) | C14—C15—H15 | 120.1 |
C2—C1—Fe1 | 69.82 (16) | C15—C16—C17 | 121.3 (3) |
C5—C1—Fe1 | 69.75 (16) | C15—C16—H16 | 119.4 |
C11—C1—Fe1 | 128.7 (2) | C17—C16—H16 | 119.4 |
C3—C2—C1 | 108.5 (3) | C18—C17—C16 | 122.9 (3) |
C3—C2—Fe1 | 69.61 (17) | C18—C17—C22 | 118.2 (3) |
C1—C2—Fe1 | 69.53 (15) | C16—C17—C22 | 119.0 (3) |
C3—C2—H2 | 125.7 | C19—C18—C17 | 121.4 (3) |
C1—C2—H2 | 125.7 | C19—C18—H18 | 119.3 |
Fe1—C2—H2 | 126.7 | C17—C18—H18 | 119.3 |
C4—C3—C2 | 108.1 (3) | C18—C19—C20 | 120.5 (3) |
C4—C3—Fe1 | 69.82 (18) | C18—C19—H19 | 119.7 |
C2—C3—Fe1 | 69.96 (16) | C20—C19—H19 | 119.7 |
C4—C3—H3 | 126.0 | C21—C20—C19 | 120.7 (3) |
C2—C3—H3 | 126.0 | C21—C20—H20 | 119.6 |
Fe1—C3—H3 | 125.8 | C19—C20—H20 | 119.6 |
C3—C4—C5 | 108.2 (3) | C20—C21—C22 | 120.5 (3) |
C3—C4—Fe1 | 69.85 (18) | C20—C21—H21 | 119.7 |
C5—C4—Fe1 | 69.85 (17) | C22—C21—H21 | 119.7 |
C3—C4—H4 | 125.9 | C13—C22—C21 | 123.2 (2) |
C5—C4—H4 | 125.9 | C13—C22—C17 | 118.1 (2) |
Fe1—C4—H4 | 126.0 | C21—C22—C17 | 118.6 (3) |
C9—Fe1—C1—C2 | −169.4 (3) | C10—Fe1—C6—C7 | 119.6 (3) |
C6—Fe1—C1—C2 | 114.4 (2) | C4—Fe1—C6—C7 | 156.5 (5) |
C10—Fe1—C1—C2 | 156.4 (2) | C3—Fe1—C6—C7 | −45.9 (4) |
C4—Fe1—C1—C2 | −80.6 (2) | C1—Fe1—C6—C7 | −125.7 (2) |
C3—Fe1—C1—C2 | −37.12 (19) | C8—Fe1—C6—C7 | 37.4 (2) |
C7—Fe1—C1—C2 | 73.5 (2) | C5—Fe1—C6—C7 | −167.2 (2) |
C8—Fe1—C1—C2 | 40.3 (5) | C2—Fe1—C6—C7 | −82.4 (2) |
C5—Fe1—C1—C2 | −118.1 (2) | C10—C6—C7—C8 | 0.3 (4) |
C9—Fe1—C1—C5 | −51.2 (4) | Fe1—C6—C7—C8 | −59.7 (2) |
C6—Fe1—C1—C5 | −127.48 (19) | C10—C6—C7—Fe1 | 59.9 (2) |
C10—Fe1—C1—C5 | −85.5 (2) | C9—Fe1—C7—C6 | −80.6 (3) |
C4—Fe1—C1—C5 | 37.54 (18) | C10—Fe1—C7—C6 | −36.9 (2) |
C3—Fe1—C1—C5 | 81.0 (2) | C4—Fe1—C7—C6 | −167.7 (3) |
C7—Fe1—C1—C5 | −168.33 (19) | C3—Fe1—C7—C6 | 158.3 (2) |
C8—Fe1—C1—C5 | 158.4 (4) | C1—Fe1—C7—C6 | 74.4 (3) |
C2—Fe1—C1—C5 | 118.1 (2) | C8—Fe1—C7—C6 | −119.3 (3) |
C9—Fe1—C1—C11 | 71.3 (4) | C5—Fe1—C7—C6 | 43.1 (6) |
C6—Fe1—C1—C11 | −4.9 (3) | C2—Fe1—C7—C6 | 115.5 (2) |
C10—Fe1—C1—C11 | 37.0 (3) | C9—Fe1—C7—C8 | 38.7 (2) |
C4—Fe1—C1—C11 | 160.1 (3) | C6—Fe1—C7—C8 | 119.3 (3) |
C3—Fe1—C1—C11 | −156.4 (3) | C10—Fe1—C7—C8 | 82.4 (3) |
C7—Fe1—C1—C11 | −45.8 (3) | C4—Fe1—C7—C8 | −48.3 (4) |
C8—Fe1—C1—C11 | −79.0 (5) | C3—Fe1—C7—C8 | −82.4 (3) |
C5—Fe1—C1—C11 | 122.5 (3) | C1—Fe1—C7—C8 | −166.3 (2) |
C2—Fe1—C1—C11 | −119.3 (3) | C5—Fe1—C7—C8 | 162.4 (5) |
C5—C1—C2—C3 | −1.2 (3) | C2—Fe1—C7—C8 | −125.1 (2) |
C11—C1—C2—C3 | −177.4 (3) | C6—C7—C8—C9 | −0.1 (4) |
Fe1—C1—C2—C3 | 58.9 (2) | Fe1—C7—C8—C9 | −59.6 (2) |
C5—C1—C2—Fe1 | −60.01 (18) | C6—C7—C8—Fe1 | 59.5 (2) |
C11—C1—C2—Fe1 | 123.7 (3) | C9—Fe1—C8—C7 | −117.8 (3) |
C9—Fe1—C2—C3 | 42.7 (6) | C6—Fe1—C8—C7 | −37.3 (2) |
C6—Fe1—C2—C3 | 155.5 (2) | C10—Fe1—C8—C7 | −80.2 (2) |
C10—Fe1—C2—C3 | −171.8 (3) | C4—Fe1—C8—C7 | 156.9 (2) |
C4—Fe1—C2—C3 | −37.6 (2) | C3—Fe1—C8—C7 | 114.7 (2) |
C1—Fe1—C2—C3 | −120.0 (3) | C1—Fe1—C8—C7 | 42.8 (6) |
C7—Fe1—C2—C3 | 113.5 (2) | C5—Fe1—C8—C7 | −170.0 (3) |
C8—Fe1—C2—C3 | 72.9 (3) | C2—Fe1—C8—C7 | 74.3 (3) |
C5—Fe1—C2—C3 | −81.6 (2) | C6—Fe1—C8—C9 | 80.5 (3) |
C9—Fe1—C2—C1 | 162.8 (5) | C10—Fe1—C8—C9 | 37.6 (2) |
C6—Fe1—C2—C1 | −84.4 (2) | C4—Fe1—C8—C9 | −85.3 (3) |
C10—Fe1—C2—C1 | −51.8 (4) | C3—Fe1—C8—C9 | −127.5 (2) |
C4—Fe1—C2—C1 | 82.4 (2) | C1—Fe1—C8—C9 | 160.6 (4) |
C3—Fe1—C2—C1 | 120.0 (3) | C7—Fe1—C8—C9 | 117.8 (3) |
C7—Fe1—C2—C1 | −126.5 (2) | C5—Fe1—C8—C9 | −52.2 (4) |
C8—Fe1—C2—C1 | −167.1 (2) | C2—Fe1—C8—C9 | −167.9 (2) |
C5—Fe1—C2—C1 | 38.38 (18) | C7—C8—C9—C10 | −0.1 (4) |
C1—C2—C3—C4 | 0.8 (3) | Fe1—C8—C9—C10 | −60.3 (2) |
Fe1—C2—C3—C4 | 59.6 (2) | C7—C8—C9—Fe1 | 60.2 (2) |
C1—C2—C3—Fe1 | −58.80 (19) | C6—Fe1—C9—C10 | 37.2 (2) |
C9—Fe1—C3—C4 | 74.3 (3) | C4—Fe1—C9—C10 | −128.2 (2) |
C6—Fe1—C3—C4 | −171.7 (3) | C3—Fe1—C9—C10 | −169.4 (2) |
C10—Fe1—C3—C4 | 46.7 (6) | C1—Fe1—C9—C10 | −49.0 (4) |
C1—Fe1—C3—C4 | −81.8 (2) | C7—Fe1—C9—C10 | 80.7 (2) |
C7—Fe1—C3—C4 | 156.6 (2) | C8—Fe1—C9—C10 | 118.7 (3) |
C8—Fe1—C3—C4 | 114.8 (2) | C5—Fe1—C9—C10 | −85.1 (3) |
C5—Fe1—C3—C4 | −37.76 (19) | C2—Fe1—C9—C10 | 157.2 (5) |
C2—Fe1—C3—C4 | −119.1 (3) | C6—Fe1—C9—C8 | −81.5 (3) |
C9—Fe1—C3—C2 | −166.6 (2) | C10—Fe1—C9—C8 | −118.7 (3) |
C6—Fe1—C3—C2 | −52.6 (4) | C4—Fe1—C9—C8 | 113.0 (3) |
C10—Fe1—C3—C2 | 165.8 (5) | C3—Fe1—C9—C8 | 71.9 (3) |
C4—Fe1—C3—C2 | 119.1 (3) | C1—Fe1—C9—C8 | −167.8 (3) |
C1—Fe1—C3—C2 | 37.31 (18) | C7—Fe1—C9—C8 | −38.0 (2) |
C7—Fe1—C3—C2 | −84.3 (2) | C5—Fe1—C9—C8 | 156.1 (2) |
C8—Fe1—C3—C2 | −126.2 (2) | C2—Fe1—C9—C8 | 38.4 (6) |
C5—Fe1—C3—C2 | 81.3 (2) | C7—C6—C10—C9 | −0.4 (4) |
C2—C3—C4—C5 | −0.2 (3) | Fe1—C6—C10—C9 | 59.6 (2) |
Fe1—C3—C4—C5 | 59.5 (2) | C7—C6—C10—Fe1 | −59.9 (2) |
C2—C3—C4—Fe1 | −59.7 (2) | C8—C9—C10—C6 | 0.3 (4) |
C9—Fe1—C4—C3 | −125.8 (2) | Fe1—C9—C10—C6 | −59.9 (2) |
C6—Fe1—C4—C3 | 164.6 (5) | C8—C9—C10—Fe1 | 60.2 (2) |
C10—Fe1—C4—C3 | −166.1 (2) | C9—Fe1—C10—C6 | 118.9 (3) |
C1—Fe1—C4—C3 | 81.6 (2) | C4—Fe1—C10—C6 | −169.1 (2) |
C7—Fe1—C4—C3 | −49.2 (4) | C3—Fe1—C10—C6 | 153.9 (5) |
C8—Fe1—C4—C3 | −82.5 (2) | C1—Fe1—C10—C6 | −83.5 (2) |
C5—Fe1—C4—C3 | 119.3 (3) | C7—Fe1—C10—C6 | 37.3 (2) |
C2—Fe1—C4—C3 | 37.71 (18) | C8—Fe1—C10—C6 | 80.8 (2) |
C9—Fe1—C4—C5 | 114.9 (2) | C5—Fe1—C10—C6 | −127.3 (2) |
C6—Fe1—C4—C5 | 45.3 (6) | C2—Fe1—C10—C6 | −47.2 (4) |
C10—Fe1—C4—C5 | 74.6 (2) | C6—Fe1—C10—C9 | −118.9 (3) |
C3—Fe1—C4—C5 | −119.3 (3) | C4—Fe1—C10—C9 | 72.0 (3) |
C1—Fe1—C4—C5 | −37.63 (18) | C3—Fe1—C10—C9 | 34.9 (6) |
C7—Fe1—C4—C5 | −168.5 (3) | C1—Fe1—C10—C9 | 157.5 (2) |
C8—Fe1—C4—C5 | 158.2 (2) | C7—Fe1—C10—C9 | −81.6 (3) |
C2—Fe1—C4—C5 | −81.55 (19) | C8—Fe1—C10—C9 | −38.1 (2) |
C3—C4—C5—C1 | −0.5 (3) | C5—Fe1—C10—C9 | 113.8 (2) |
Fe1—C4—C5—C1 | 59.01 (19) | C2—Fe1—C10—C9 | −166.2 (3) |
C3—C4—C5—Fe1 | −59.5 (2) | C12—N1—C11—C1 | −150.6 (3) |
C2—C1—C5—C4 | 1.0 (3) | C2—C1—C11—N1 | −145.3 (3) |
C11—C1—C5—C4 | 177.2 (3) | C5—C1—C11—N1 | 39.2 (4) |
Fe1—C1—C5—C4 | −59.02 (19) | Fe1—C1—C11—N1 | −54.1 (4) |
C2—C1—C5—Fe1 | 60.05 (19) | C11—N1—C12—N2 | −175.8 (3) |
C11—C1—C5—Fe1 | −123.8 (3) | C11—N1—C12—S1 | 4.0 (4) |
C9—Fe1—C5—C4 | −83.8 (2) | C13—N2—C12—N1 | 2.1 (4) |
C6—Fe1—C5—C4 | −167.1 (2) | C13—N2—C12—S1 | −177.7 (2) |
C10—Fe1—C5—C4 | −126.8 (2) | C12—N2—C13—C14 | 67.5 (4) |
C3—Fe1—C5—C4 | 37.46 (19) | C12—N2—C13—C22 | −115.0 (3) |
C1—Fe1—C5—C4 | 119.5 (3) | C22—C13—C14—C15 | 0.7 (4) |
C7—Fe1—C5—C4 | 158.9 (5) | N2—C13—C14—C15 | 178.1 (2) |
C8—Fe1—C5—C4 | −47.2 (4) | C13—C14—C15—C16 | −2.2 (4) |
C2—Fe1—C5—C4 | 81.2 (2) | C14—C15—C16—C17 | 1.3 (5) |
C9—Fe1—C5—C1 | 156.8 (2) | C15—C16—C17—C18 | −178.4 (3) |
C6—Fe1—C5—C1 | 73.5 (2) | C15—C16—C17—C22 | 1.1 (4) |
C10—Fe1—C5—C1 | 113.8 (2) | C16—C17—C18—C19 | −178.7 (3) |
C4—Fe1—C5—C1 | −119.5 (3) | C22—C17—C18—C19 | 1.9 (4) |
C3—Fe1—C5—C1 | −82.01 (19) | C17—C18—C19—C20 | 0.1 (5) |
C7—Fe1—C5—C1 | 39.4 (6) | C18—C19—C20—C21 | −1.4 (5) |
C8—Fe1—C5—C1 | −166.6 (3) | C19—C20—C21—C22 | 0.7 (5) |
C2—Fe1—C5—C1 | −38.27 (16) | C14—C13—C22—C21 | −178.9 (2) |
C9—Fe1—C6—C10 | −37.8 (2) | N2—C13—C22—C21 | 3.6 (4) |
C4—Fe1—C6—C10 | 36.9 (6) | C14—C13—C22—C17 | 1.7 (4) |
C3—Fe1—C6—C10 | −165.4 (3) | N2—C13—C22—C17 | −175.8 (2) |
C1—Fe1—C6—C10 | 114.7 (2) | C20—C21—C22—C13 | −178.2 (3) |
C7—Fe1—C6—C10 | −119.6 (3) | C20—C21—C22—C17 | 1.2 (4) |
C8—Fe1—C6—C10 | −82.2 (3) | C18—C17—C22—C13 | 177.0 (2) |
C5—Fe1—C6—C10 | 73.2 (3) | C16—C17—C22—C13 | −2.5 (4) |
C2—Fe1—C6—C10 | 158.0 (2) | C18—C17—C22—C21 | −2.5 (4) |
C9—Fe1—C6—C7 | 81.8 (3) | C16—C17—C22—C21 | 178.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···S1i | 0.90 (3) | 2.45 (3) | 3.326 (3) | 167 (2) |
Symmetry code: (i) −x+2, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Fe(C5H5)(C17H15N2S)] |
Mr | 400.31 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 7.958 (3), 10.890 (5), 12.357 (5) |
α, β, γ (°) | 66.886 (6), 78.637 (8), 73.306 (8) |
V (Å3) | 939.1 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.92 |
Crystal size (mm) | 0.39 × 0.24 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.755, 0.867 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5178, 3645, 2741 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.105, 1.04 |
No. of reflections | 3645 |
No. of parameters | 241 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.35, −0.32 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···S1i | 0.90 (3) | 2.45 (3) | 3.326 (3) | 167 (2) |
Symmetry code: (i) −x+2, −y+1, −z. |
Acknowledgements
We gratefully acknowledge financial support from the Foundation of Henan Educational Committee (2011B150001) and the Foundation of Henan University of Urban Construction (2010JYB007).
References
Bruker (2001). SMART and SAINT. Bruker AXS GmbH, Karlsruhe, Germany. Google Scholar
Di Grandi, M. J., Curran, K. J., Feigelson, G., Prashad, A., Ross, A. A., Visalli, R., Fairhurst, J., Feld, B. & Bloom, J. D. (2004). Bioorg. Med. Chem. Lett. 14, 4157–4160. Web of Science CrossRef PubMed CAS Google Scholar
Han, T., Cho, J. H. & Oh, C. H. (2006). Eur. J. Med. Chem. 41, 825–832. Web of Science CrossRef PubMed CAS Google Scholar
Heck, R. & Marsura, A. (2003). Tetrahedron Lett. 44, 1533–1536. Web of Science CrossRef CAS Google Scholar
Henderson, W., Nicholson, B. K. & Rickard, C. E. F. (2001). Inorg. Chim. Acta, 320, 101–109. Web of Science CSD CrossRef CAS Google Scholar
Kaymakcioglu, B. K., Rollas, S., Korcegez, E. & Aricioglu, F. (2005). Eur. J. Pharm. Sci. 26, 97–103. Web of Science PubMed CAS Google Scholar
Rostom, S. A. F. (2006). Bioorg. Med. Chem. 14, 6475–6485. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2001). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Suh et al. (2005). J. Med. Chem. 48, 5823–5836. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Thiourea and its derivatives have attracted great attention because of their potential applications in the field of medicine (Di Grandi et al., 2004; Suh et al., 2005; Kaymakcioglu et al., 2005; Han et al., 2006), bioorganic (Rostom et al., 2006) and supramolecular chemistry (Henderson et al., 2001; Heck et al., 2003). Detailed information on their molecular and crystal structures is necessary to understand their biologic activity and coordination possibility. Here we want to report the crystal structure of a new ferrocene-containing thiourea, 1-((ferroecen-1-yl)methyl)-3-(naphthalen-1-yl)thiourea.
The molecular structure of the title compound is composed of a (ferroecen-1-yl)methyl group and a naphthalen group joined by an organic thiourea spacer. The Fe—C bond distances within the ferrocene group are in the range of 2.043 (3)–2.048 (3) Å for the substituted cyclopentadienyl (Cp) ring [C1—C5] and 2.033 (3)–2.048 (3) Å for the unsubstituted Cp ring [C6—C10]. The Cp rings are almost parallel and are essentially eclipsed, and the dihedral angle between the Cp ring planes is 0.807 (11) °. The Fe atom is slightly closer to the substituted cyclopentadienyl ring, with a Fe-centroid distance of 1.6510 (8) Å, compared with 1.6597 (8) Å for the unsubstituted ring. The bridging unit between the substituted Cp ring and naphthyl rings is planar within 0.0174 Å and makes dihedral angles of 59.032 (10) ° and 66.019 (21) °, respectively, with these two rings, while the angle between the substituted Cp ring and naphthyl rings is 72.094 (18) °. The H atoms of the NH groups of thiourea are positioned anti to each other. In the crystal, the molecules form centrosymmetric dimers via intermolecular N—H···S hydrogen bonds.