metal-organic compounds
(Acetato-κO)(2,5,5,7,9,12,12,14-octamethyl-1,4,8,11-tetraazacyclotetradecane-κ4N,N′,N′′,N′′′)zinc perchlorate
aDepartment of Chemistry, University of Chittagong, Chittagong 4331, Bangladesh, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The ZnII atom in the cation of the title salt, [Zn(C2H3O2)(C18H40N4)]ClO4, is five-coordinated by the four N atoms of the macrocycle and the O atom of the monodentate acetate ligand. The N4O donor set is based on a trigonal bipyramid with two N atoms occupying axial positions [N—Zn—N = 170.89 (16)°]. The perchlorate anions are associated with the cations via N—H⋯O hydrogen bonds; intramolecular N—H⋯O(acetate) interactions are also observed. The neutral aggregates are connected into an helical chain along the b axis via N—H⋯O(acetate) hydrogen bonds. The perchlorate anion was found to be disordered about a pseudo-threefold axis: the major component of the disorder had a site occupancy factor of 0.692 (11).
Related literature
For background to the synthesis, characterization, kinetic studies and biological activity of 14-membered methyl-substituted tetraazamacrocyclic ligands, their N-substituted derivatives and their metal complexes, see: Bembi et al. (1990); Roy et al. (2007, 2011); Hazari et al. (2008). For additional geometric analysis, see: Addison et al. (1984).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536811045582/hb6470sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811045582/hb6470Isup2.hkl
The title complex, (I), was prepared by the ν(O2C); 1129, 624 ν(ClO4). Colourless prisms of (I) were obtained from slow evaporation of its methanol solution.
reaction of [ZnL(O2CMe)][O2CMe] with perchlorate, where L is 2,5,5,7,9,12,12,14-octamethyl-1,4,8,11-tetra-azacyclotetradecane. Thus, [ZnL(O2CMe)][O2CMe] (0.495 g, 1.0 mmol) was dissolved in hot methanol (40 ml) and sodium perchlorate hexahydrate (0.460 g, 2.0 mmol) added. The reaction mixture was heated for 15 min. During heating a white product separated out. After cooling at room temperature for 30 min, the product, (I), was filtered off, washed with methanol followed by diethyl ether and dried in a desiccator over silica-gel. The yield was about 40%. Anal. Calc for C20H43ClN4O6Zn: C, 44.78; H, 7.46; N, 10.45; Zn, 12.20%. Found: C, 44.63; H, 7.32; N, 10.25; Zn, 12.01%. IR (cm-1): 1599The H-atoms were placed in calculated positions (C—H = 0.98–1.00 Å) and were included in the
in the riding model approximation, with Uiso(H) set to 1.2–1.5Uequiv(C). The N—H atoms were located from a difference map and refined with N—H = 0.88±0.01 Å, and with Uiso(H) set to 1.2Uequiv(N). The perchlorate anion was disordered about a pseudo-threefold axis. Two positions were resolved for three O atoms. The Cl—O and O···O distances were constrained to 1.44±0.01 and 2.34±0.01 Å, respectively. From anisotropic the major component of the disordered residue had a site occupancy factor = 0.692 (11).In continuation of long-terms studies of the synthesis, characterization and biological activities of methyl substituted tetraazamacrocyclic ligands and their metal complexes (Bembi et al., 1990; Roy et al., 2007; Hazari et al., 2008; Roy et al., 2011), the synthesis and
of the title complex, (I), was investigated.The τ = 0.71, compared with the values of t = 0.0 and 1.0 for ideal square pyramidal and trigonal bipyramidal, respectively (Addison et al., 1984), the coordination geometry is distorted trigonal bipyramidal with the N2 and N4 atoms occupying axial positions; N2—Zn—N4 = 170.89 (16)°.
of (I) comprises a ZnL(O2CMe) cation, Fig. 1, and a disordered perchlorate anion; L = 2,5,5,7,9,12,12,14-octamethyl-1,4,8,11-tetra-azacyclotetradecane. The Zn atom is five-coordinate, Table 1, within an N4O donor set derived from the four N atoms of the macrocyclic ligand and an O atom of a monodentate acetate; the Zn···O2 separation is 3.132 (4) Å. Based on the value ofThe cations in (I) are connected via weak N—H···O(acetate) hydrogen bonds, Table 1, which stabilize supramolecular helical chains along the b axis, Fig. 2; intramolecular N—H···O(acetate) hydrogen bonds are also present. The perchlorate anions associate with the chains via N—H···O interactions, also shown in Fig. 2.
For background to the synthesis, characterization, kinetic studies and biological activity of 14-membered methyl-substituted tetraazamacrocyclic ligands, their N-substituted derivatives and their metal complexes, see: Bembi et al. (1990); Roy et al. (2007, 2011); Hazari et al. (2008). For additional geometric analysis, see: Addison et al. (1984).
Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); cell
CrystalClear (Molecular Structure Corporation & Rigaku, 2005); data reduction: CrystalClear (Molecular Structure Corporation & Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).[Zn(C2H3O2)(C18H40N4)]ClO4 | F(000) = 2288 |
Mr = 536.40 | Dx = 1.375 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 7295 reflections |
a = 17.822 (6) Å | θ = 2.9–30.3° |
b = 12.995 (6) Å | µ = 1.09 mm−1 |
c = 22.381 (7) Å | T = 153 K |
V = 5183 (3) Å3 | Prism, colourless |
Z = 8 | 0.30 × 0.11 × 0.04 mm |
Rigaku AFC12K/SATURN724 diffractometer | 4534 independent reflections |
Radiation source: fine-focus sealed tube | 4080 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.069 |
ω scans | θmax = 25.0°, θmin = 2.8° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −20→19 |
Tmin = 0.602, Tmax = 1.000 | k = −12→15 |
23785 measured reflections | l = −23→26 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.080 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.183 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.29 | w = 1/[σ2(Fo2) + (0.0546P)2 + 10.5654P] where P = (Fo2 + 2Fc2)/3 |
4534 reflections | (Δ/σ)max = 0.002 |
320 parameters | Δρmax = 0.63 e Å−3 |
22 restraints | Δρmin = −0.48 e Å−3 |
[Zn(C2H3O2)(C18H40N4)]ClO4 | V = 5183 (3) Å3 |
Mr = 536.40 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 17.822 (6) Å | µ = 1.09 mm−1 |
b = 12.995 (6) Å | T = 153 K |
c = 22.381 (7) Å | 0.30 × 0.11 × 0.04 mm |
Rigaku AFC12K/SATURN724 diffractometer | 4534 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 4080 reflections with I > 2σ(I) |
Tmin = 0.602, Tmax = 1.000 | Rint = 0.069 |
23785 measured reflections |
R[F2 > 2σ(F2)] = 0.080 | 22 restraints |
wR(F2) = 0.183 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.29 | w = 1/[σ2(Fo2) + (0.0546P)2 + 10.5654P] where P = (Fo2 + 2Fc2)/3 |
4534 reflections | Δρmax = 0.63 e Å−3 |
320 parameters | Δρmin = −0.48 e Å−3 |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Zn | 1.01476 (3) | 0.24442 (4) | 0.65431 (3) | 0.0345 (2) | |
O1 | 1.0503 (2) | 0.2678 (3) | 0.73667 (16) | 0.0433 (9) | |
O2 | 1.0583 (2) | 0.1015 (3) | 0.76154 (16) | 0.0491 (10) | |
N1 | 1.0563 (2) | 0.3315 (3) | 0.58108 (19) | 0.0335 (9) | |
H1N | 1.032 (3) | 0.304 (4) | 0.5507 (16) | 0.040* | |
N2 | 0.9363 (2) | 0.3757 (3) | 0.6641 (2) | 0.0392 (10) | |
H2N | 0.952 (3) | 0.419 (3) | 0.6913 (19) | 0.047* | |
N3 | 0.9287 (2) | 0.1464 (3) | 0.62552 (19) | 0.0349 (10) | |
H3N | 0.923 (3) | 0.166 (4) | 0.5881 (9) | 0.042* | |
N4 | 1.0846 (2) | 0.1156 (3) | 0.63040 (19) | 0.0351 (10) | |
H4N | 1.093 (3) | 0.086 (4) | 0.6652 (12) | 0.042* | |
C1 | 1.0292 (3) | 0.4397 (4) | 0.5913 (2) | 0.0379 (12) | |
H1 | 1.0340 | 0.4792 | 0.5531 | 0.046* | |
C2 | 1.0757 (3) | 0.4927 (4) | 0.6390 (3) | 0.0444 (14) | |
H2A | 1.0825 | 0.4461 | 0.6730 | 0.067* | |
H2B | 1.0498 | 0.5552 | 0.6524 | 0.067* | |
H2C | 1.1248 | 0.5111 | 0.6225 | 0.067* | |
C3 | 0.9465 (3) | 0.4332 (4) | 0.6080 (2) | 0.0404 (13) | |
H3A | 0.9259 | 0.5035 | 0.6126 | 0.048* | |
H3B | 0.9185 | 0.3985 | 0.5755 | 0.048* | |
C4 | 0.8573 (3) | 0.3561 (5) | 0.6842 (3) | 0.0467 (14) | |
C5 | 0.8056 (4) | 0.4482 (5) | 0.6709 (4) | 0.0645 (19) | |
H5A | 0.8290 | 0.5115 | 0.6856 | 0.097* | |
H5B | 0.7572 | 0.4380 | 0.6909 | 0.097* | |
H5C | 0.7976 | 0.4535 | 0.6277 | 0.097* | |
C6 | 0.8606 (4) | 0.3452 (5) | 0.7522 (3) | 0.0587 (17) | |
H6A | 0.8995 | 0.2952 | 0.7629 | 0.088* | |
H6B | 0.8119 | 0.3214 | 0.7670 | 0.088* | |
H6C | 0.8725 | 0.4121 | 0.7701 | 0.088* | |
C7 | 0.8231 (3) | 0.2632 (4) | 0.6516 (3) | 0.0477 (15) | |
H7A | 0.8237 | 0.2799 | 0.6084 | 0.057* | |
H7B | 0.7697 | 0.2597 | 0.6636 | 0.057* | |
C8 | 0.8554 (3) | 0.1523 (4) | 0.6580 (3) | 0.0439 (13) | |
H8 | 0.8203 | 0.1065 | 0.6354 | 0.053* | |
C9 | 0.8603 (3) | 0.1078 (5) | 0.7196 (3) | 0.0535 (16) | |
H9A | 0.8657 | 0.0329 | 0.7169 | 0.080* | |
H9B | 0.8146 | 0.1247 | 0.7418 | 0.080* | |
H9C | 0.9039 | 0.1368 | 0.7403 | 0.080* | |
C10 | 0.9591 (3) | 0.0393 (4) | 0.6200 (2) | 0.0369 (12) | |
H10 | 0.9632 | 0.0086 | 0.6608 | 0.044* | |
C11 | 0.9102 (3) | −0.0302 (4) | 0.5816 (3) | 0.0435 (13) | |
H11A | 0.8634 | −0.0454 | 0.6028 | 0.065* | |
H11B | 0.9370 | −0.0945 | 0.5734 | 0.065* | |
H11C | 0.8987 | 0.0046 | 0.5438 | 0.065* | |
C12 | 1.0379 (3) | 0.0472 (4) | 0.5929 (2) | 0.0372 (12) | |
H12A | 1.0610 | −0.0220 | 0.5907 | 0.045* | |
H12B | 1.0347 | 0.0752 | 0.5518 | 0.045* | |
C13 | 1.1625 (3) | 0.1373 (4) | 0.6071 (2) | 0.0397 (12) | |
C14 | 1.2063 (3) | 0.1843 (5) | 0.6585 (3) | 0.0494 (15) | |
H14A | 1.2567 | 0.2030 | 0.6448 | 0.074* | |
H14B | 1.2101 | 0.1343 | 0.6911 | 0.074* | |
H14C | 1.1802 | 0.2461 | 0.6728 | 0.074* | |
C15 | 1.2013 (3) | 0.0373 (5) | 0.5876 (3) | 0.0500 (15) | |
H15A | 1.2539 | 0.0515 | 0.5778 | 0.075* | |
H15B | 1.1758 | 0.0094 | 0.5524 | 0.075* | |
H15C | 1.1989 | −0.0129 | 0.6202 | 0.075* | |
C16 | 1.1590 (3) | 0.2100 (4) | 0.5530 (2) | 0.0359 (12) | |
H16A | 1.1229 | 0.1803 | 0.5242 | 0.043* | |
H16B | 1.2089 | 0.2089 | 0.5336 | 0.043* | |
C17 | 1.1374 (3) | 0.3234 (4) | 0.5624 (2) | 0.0352 (12) | |
H17 | 1.1693 | 0.3523 | 0.5951 | 0.042* | |
C18 | 1.1531 (3) | 0.3833 (4) | 0.5052 (2) | 0.0449 (13) | |
H18A | 1.2058 | 0.3746 | 0.4940 | 0.067* | |
H18B | 1.1426 | 0.4564 | 0.5118 | 0.067* | |
H18C | 1.1209 | 0.3573 | 0.4731 | 0.067* | |
C19 | 1.0657 (3) | 0.1956 (4) | 0.7740 (2) | 0.0390 (12) | |
C20 | 1.0900 (4) | 0.2282 (5) | 0.8341 (3) | 0.0555 (16) | |
H20A | 1.0463 | 0.2319 | 0.8606 | 0.083* | |
H20B | 1.1137 | 0.2961 | 0.8316 | 0.083* | |
H20C | 1.1260 | 0.1783 | 0.8500 | 0.083* | |
Cl | 0.90070 (8) | 0.24995 (10) | 0.45914 (6) | 0.0454 (4) | 0.692 (11) |
O3 | 0.8898 (3) | 0.2216 (4) | 0.39872 (16) | 0.0672 (13) | 0.692 (11) |
O4 | 0.9752 (3) | 0.2296 (10) | 0.4786 (4) | 0.102 (4) | 0.692 (11) |
O5 | 0.8516 (5) | 0.1844 (6) | 0.4969 (3) | 0.081 (3) | 0.692 (11) |
O6 | 0.8776 (6) | 0.3529 (4) | 0.4698 (3) | 0.074 (3) | 0.692 (11) |
Cl1 | 0.90070 (8) | 0.24995 (10) | 0.45914 (6) | 0.0454 (4) | 0.308 (11) |
O13 | 0.8898 (3) | 0.2216 (4) | 0.39872 (16) | 0.0672 (13) | 0.308 (11) |
O14 | 0.9755 (6) | 0.2979 (15) | 0.4630 (7) | 0.102 (4) | 0.308 (11) |
O15 | 0.8985 (12) | 0.1657 (9) | 0.4985 (5) | 0.081 (3) | 0.308 (11) |
O16 | 0.8483 (9) | 0.3283 (11) | 0.4765 (7) | 0.074 (3) | 0.308 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn | 0.0378 (4) | 0.0312 (4) | 0.0344 (4) | −0.0006 (3) | 0.0006 (2) | 0.0000 (2) |
O1 | 0.054 (2) | 0.042 (2) | 0.034 (2) | 0.0042 (18) | −0.0023 (17) | −0.0004 (17) |
O2 | 0.071 (3) | 0.038 (2) | 0.038 (2) | −0.006 (2) | −0.0047 (19) | 0.0031 (18) |
N1 | 0.036 (2) | 0.029 (2) | 0.035 (2) | 0.0017 (19) | −0.0041 (18) | −0.0017 (18) |
N2 | 0.039 (3) | 0.036 (3) | 0.042 (3) | 0.003 (2) | 0.001 (2) | −0.004 (2) |
N3 | 0.036 (2) | 0.032 (2) | 0.037 (2) | 0.0009 (18) | 0.0018 (19) | −0.0004 (19) |
N4 | 0.038 (2) | 0.033 (2) | 0.034 (2) | 0.0042 (19) | −0.0036 (19) | 0.0014 (19) |
C1 | 0.053 (3) | 0.025 (3) | 0.036 (3) | 0.004 (2) | 0.004 (2) | 0.000 (2) |
C2 | 0.053 (4) | 0.033 (3) | 0.047 (3) | −0.008 (3) | 0.012 (3) | −0.009 (2) |
C3 | 0.044 (3) | 0.037 (3) | 0.041 (3) | 0.008 (2) | −0.001 (2) | −0.005 (2) |
C4 | 0.044 (3) | 0.041 (3) | 0.055 (4) | 0.000 (3) | 0.007 (3) | −0.008 (3) |
C5 | 0.049 (4) | 0.045 (4) | 0.100 (5) | 0.009 (3) | 0.005 (4) | −0.014 (4) |
C6 | 0.058 (4) | 0.057 (4) | 0.060 (4) | −0.013 (3) | 0.024 (3) | −0.017 (3) |
C7 | 0.034 (3) | 0.050 (4) | 0.059 (4) | 0.000 (3) | 0.004 (3) | −0.013 (3) |
C8 | 0.044 (3) | 0.034 (3) | 0.053 (3) | −0.005 (2) | 0.006 (3) | −0.009 (3) |
C9 | 0.053 (4) | 0.052 (4) | 0.056 (4) | −0.008 (3) | 0.014 (3) | −0.005 (3) |
C10 | 0.044 (3) | 0.028 (3) | 0.038 (3) | 0.001 (2) | −0.003 (2) | 0.001 (2) |
C11 | 0.051 (3) | 0.032 (3) | 0.047 (3) | −0.006 (3) | 0.005 (3) | −0.003 (2) |
C12 | 0.039 (3) | 0.034 (3) | 0.038 (3) | 0.004 (2) | 0.000 (2) | −0.005 (2) |
C13 | 0.037 (3) | 0.036 (3) | 0.046 (3) | 0.005 (2) | −0.003 (2) | −0.002 (2) |
C14 | 0.046 (3) | 0.054 (4) | 0.048 (4) | −0.002 (3) | −0.006 (3) | 0.004 (3) |
C15 | 0.044 (3) | 0.045 (3) | 0.061 (4) | 0.008 (3) | 0.002 (3) | 0.002 (3) |
C16 | 0.034 (3) | 0.035 (3) | 0.039 (3) | 0.001 (2) | 0.000 (2) | −0.005 (2) |
C17 | 0.038 (3) | 0.035 (3) | 0.032 (3) | −0.001 (2) | 0.000 (2) | −0.004 (2) |
C18 | 0.049 (3) | 0.037 (3) | 0.049 (3) | −0.003 (3) | 0.005 (3) | 0.002 (3) |
C19 | 0.038 (3) | 0.044 (3) | 0.035 (3) | 0.002 (2) | 0.007 (2) | 0.010 (2) |
C20 | 0.076 (5) | 0.046 (4) | 0.045 (3) | −0.008 (3) | −0.006 (3) | 0.001 (3) |
Cl | 0.0548 (9) | 0.0363 (7) | 0.0450 (8) | 0.0057 (6) | −0.0117 (6) | −0.0036 (6) |
O3 | 0.090 (4) | 0.066 (3) | 0.045 (3) | 0.003 (3) | −0.022 (2) | −0.010 (2) |
O4 | 0.060 (4) | 0.161 (11) | 0.085 (6) | 0.047 (6) | −0.037 (4) | −0.066 (7) |
O5 | 0.103 (8) | 0.070 (5) | 0.069 (4) | −0.023 (5) | −0.008 (5) | 0.019 (3) |
O6 | 0.122 (8) | 0.025 (4) | 0.076 (4) | 0.008 (4) | −0.001 (4) | 0.001 (3) |
Cl1 | 0.0548 (9) | 0.0363 (7) | 0.0450 (8) | 0.0057 (6) | −0.0117 (6) | −0.0036 (6) |
O13 | 0.090 (4) | 0.066 (3) | 0.045 (3) | 0.003 (3) | −0.022 (2) | −0.010 (2) |
O14 | 0.060 (4) | 0.161 (11) | 0.085 (6) | 0.047 (6) | −0.037 (4) | −0.066 (7) |
O15 | 0.103 (8) | 0.070 (5) | 0.069 (4) | −0.023 (5) | −0.008 (5) | 0.019 (3) |
O16 | 0.122 (8) | 0.025 (4) | 0.076 (4) | 0.008 (4) | −0.001 (4) | 0.001 (3) |
Zn—O1 | 1.973 (4) | C9—H9A | 0.9800 |
Zn—N1 | 2.124 (4) | C9—H9B | 0.9800 |
Zn—N2 | 2.216 (4) | C9—H9C | 0.9800 |
Zn—N3 | 2.095 (4) | C10—C11 | 1.521 (7) |
Zn—N4 | 2.153 (4) | C10—C12 | 1.534 (7) |
O1—C19 | 1.286 (6) | C10—H10 | 1.0000 |
O2—C19 | 1.261 (7) | C11—H11A | 0.9800 |
N1—C1 | 1.504 (6) | C11—H11B | 0.9800 |
N1—C17 | 1.508 (6) | C11—H11C | 0.9800 |
N1—H1N | 0.882 (10) | C12—H12A | 0.9900 |
N2—C3 | 1.473 (7) | C12—H12B | 0.9900 |
N2—C4 | 1.500 (7) | C13—C14 | 1.518 (8) |
N2—H2N | 0.878 (10) | C13—C16 | 1.537 (7) |
N3—C8 | 1.497 (7) | C13—C15 | 1.535 (8) |
N3—C10 | 1.499 (6) | C14—H14A | 0.9800 |
N3—H3N | 0.879 (10) | C14—H14B | 0.9800 |
N4—C12 | 1.478 (7) | C14—H14C | 0.9800 |
N4—C13 | 1.511 (7) | C15—H15A | 0.9800 |
N4—H4N | 0.880 (10) | C15—H15B | 0.9800 |
C1—C2 | 1.518 (7) | C15—H15C | 0.9800 |
C1—C3 | 1.523 (8) | C16—C17 | 1.537 (7) |
C1—H1 | 1.0000 | C16—H16A | 0.9900 |
C2—H2A | 0.9800 | C16—H16B | 0.9900 |
C2—H2B | 0.9800 | C17—C18 | 1.524 (7) |
C2—H2C | 0.9800 | C17—H17 | 1.0000 |
C3—H3A | 0.9900 | C18—H18A | 0.9800 |
C3—H3B | 0.9900 | C18—H18B | 0.9800 |
C4—C6 | 1.528 (9) | C18—H18C | 0.9800 |
C4—C7 | 1.537 (8) | C19—C20 | 1.476 (8) |
C4—C5 | 1.540 (8) | C20—H20A | 0.9800 |
C5—H5A | 0.9800 | C20—H20B | 0.9800 |
C5—H5B | 0.9800 | C20—H20C | 0.9800 |
C5—H5C | 0.9800 | Cl—O6 | 1.420 (5) |
C6—H6A | 0.9800 | Cl—O3 | 1.415 (4) |
C6—H6B | 0.9800 | Cl—O4 | 1.422 (5) |
C6—H6C | 0.9800 | Cl—O5 | 1.484 (5) |
C7—C8 | 1.559 (8) | Cl1—O15 | 1.405 (7) |
C7—H7A | 0.9900 | Cl1—O16 | 1.435 (7) |
C7—H7B | 0.9900 | Cl1—O13 | 1.415 (4) |
C8—C9 | 1.497 (8) | Cl1—O14 | 1.474 (8) |
C8—H8 | 1.0000 | ||
O1—Zn—N3 | 128.04 (17) | C7—C8—H8 | 105.8 |
O1—Zn—N1 | 121.79 (16) | C8—C9—H9A | 109.5 |
N3—Zn—N1 | 109.96 (17) | C8—C9—H9B | 109.5 |
O1—Zn—N4 | 99.58 (16) | H9A—C9—H9B | 109.5 |
N3—Zn—N4 | 82.75 (16) | C8—C9—H9C | 109.5 |
N1—Zn—N4 | 91.23 (16) | H9A—C9—H9C | 109.5 |
O1—Zn—N2 | 89.52 (16) | H9B—C9—H9C | 109.5 |
N3—Zn—N2 | 92.08 (17) | N3—C10—C11 | 113.0 (4) |
N1—Zn—N2 | 83.46 (17) | N3—C10—C12 | 107.5 (4) |
N4—Zn—N2 | 170.89 (16) | C11—C10—C12 | 109.9 (4) |
C19—O1—Zn | 124.3 (4) | N3—C10—H10 | 108.7 |
C1—N1—C17 | 114.5 (4) | C11—C10—H10 | 108.7 |
C1—N1—Zn | 105.6 (3) | C12—C10—H10 | 108.7 |
C17—N1—Zn | 120.6 (3) | C10—C11—H11A | 109.5 |
C1—N1—H1N | 109 (4) | C10—C11—H11B | 109.5 |
C17—N1—H1N | 104 (4) | H11A—C11—H11B | 109.5 |
Zn—N1—H1N | 102 (4) | C10—C11—H11C | 109.5 |
C3—N2—C4 | 117.2 (4) | H11A—C11—H11C | 109.5 |
C3—N2—Zn | 103.2 (3) | H11B—C11—H11C | 109.5 |
C4—N2—Zn | 119.4 (3) | N4—C12—C10 | 109.3 (4) |
C3—N2—H2N | 103 (4) | N4—C12—H12A | 109.8 |
C4—N2—H2N | 102 (4) | C10—C12—H12A | 109.8 |
Zn—N2—H2N | 111 (4) | N4—C12—H12B | 109.8 |
C8—N3—C10 | 113.7 (4) | C10—C12—H12B | 109.8 |
C8—N3—Zn | 117.3 (3) | H12A—C12—H12B | 108.3 |
C10—N3—Zn | 109.0 (3) | N4—C13—C14 | 106.6 (4) |
C8—N3—H3N | 110 (4) | N4—C13—C16 | 110.4 (4) |
C10—N3—H3N | 103 (4) | C14—C13—C16 | 111.8 (5) |
Zn—N3—H3N | 102 (4) | N4—C13—C15 | 110.7 (4) |
C12—N4—C13 | 115.7 (4) | C14—C13—C15 | 109.0 (5) |
C12—N4—Zn | 106.5 (3) | C16—C13—C15 | 108.4 (4) |
C13—N4—Zn | 118.1 (3) | C13—C14—H14A | 109.5 |
C12—N4—H4N | 109 (4) | C13—C14—H14B | 109.5 |
C13—N4—H4N | 104 (4) | H14A—C14—H14B | 109.5 |
Zn—N4—H4N | 102 (4) | C13—C14—H14C | 109.5 |
N1—C1—C2 | 110.9 (4) | H14A—C14—H14C | 109.5 |
N1—C1—C3 | 107.2 (4) | H14B—C14—H14C | 109.5 |
C2—C1—C3 | 112.4 (4) | C13—C15—H15A | 109.5 |
N1—C1—H1 | 108.8 | C13—C15—H15B | 109.5 |
C2—C1—H1 | 108.8 | H15A—C15—H15B | 109.5 |
C3—C1—H1 | 108.8 | C13—C15—H15C | 109.5 |
C1—C2—H2A | 109.5 | H15A—C15—H15C | 109.5 |
C1—C2—H2B | 109.5 | H15B—C15—H15C | 109.5 |
H2A—C2—H2B | 109.5 | C13—C16—C17 | 119.5 (4) |
C1—C2—H2C | 109.5 | C13—C16—H16A | 107.5 |
H2A—C2—H2C | 109.5 | C17—C16—H16A | 107.5 |
H2B—C2—H2C | 109.5 | C13—C16—H16B | 107.5 |
N2—C3—C1 | 110.9 (4) | C17—C16—H16B | 107.5 |
N2—C3—H3A | 109.5 | H16A—C16—H16B | 107.0 |
C1—C3—H3A | 109.5 | N1—C17—C18 | 111.9 (4) |
N2—C3—H3B | 109.5 | N1—C17—C16 | 110.2 (4) |
C1—C3—H3B | 109.5 | C18—C17—C16 | 109.2 (4) |
H3A—C3—H3B | 108.1 | N1—C17—H17 | 108.5 |
N2—C4—C6 | 106.2 (5) | C18—C17—H17 | 108.5 |
N2—C4—C7 | 111.3 (4) | C16—C17—H17 | 108.5 |
C6—C4—C7 | 114.6 (5) | C17—C18—H18A | 109.5 |
N2—C4—C5 | 111.8 (5) | C17—C18—H18B | 109.5 |
C6—C4—C5 | 106.7 (5) | H18A—C18—H18B | 109.5 |
C7—C4—C5 | 106.3 (5) | C17—C18—H18C | 109.5 |
C4—C5—H5A | 109.5 | H18A—C18—H18C | 109.5 |
C4—C5—H5B | 109.5 | H18B—C18—H18C | 109.5 |
H5A—C5—H5B | 109.5 | O2—C19—O1 | 122.8 (5) |
C4—C5—H5C | 109.5 | O2—C19—C20 | 120.7 (5) |
H5A—C5—H5C | 109.5 | O1—C19—C20 | 116.4 (5) |
H5B—C5—H5C | 109.5 | C19—C20—H20A | 109.5 |
C4—C6—H6A | 109.5 | C19—C20—H20B | 109.5 |
C4—C6—H6B | 109.5 | H20A—C20—H20B | 109.5 |
H6A—C6—H6B | 109.5 | C19—C20—H20C | 109.5 |
C4—C6—H6C | 109.5 | H20A—C20—H20C | 109.5 |
H6A—C6—H6C | 109.5 | H20B—C20—H20C | 109.5 |
H6B—C6—H6C | 109.5 | O6—Cl—O3 | 111.5 (4) |
C4—C7—C8 | 122.4 (5) | O6—Cl—O4 | 113.3 (4) |
C4—C7—H7A | 106.7 | O3—Cl—O4 | 111.8 (4) |
C8—C7—H7A | 106.7 | O6—Cl—O5 | 106.0 (4) |
C4—C7—H7B | 106.7 | O3—Cl—O5 | 108.3 (4) |
C8—C7—H7B | 106.7 | O4—Cl—O5 | 105.6 (4) |
H7A—C7—H7B | 106.6 | O15—Cl1—O16 | 111.4 (7) |
N3—C8—C9 | 112.1 (5) | O15—Cl1—O13 | 113.1 (6) |
N3—C8—C7 | 108.9 (4) | O16—Cl1—O13 | 110.8 (6) |
C9—C8—C7 | 117.6 (5) | O15—Cl1—O14 | 108.5 (6) |
N3—C8—H8 | 105.8 | O16—Cl1—O14 | 105.8 (6) |
C9—C8—H8 | 105.8 | O13—Cl1—O14 | 106.9 (6) |
N3—Zn—O1—C19 | 48.1 (5) | C3—N2—C4—C6 | −153.3 (5) |
N1—Zn—O1—C19 | −137.6 (4) | Zn—N2—C4—C6 | 80.8 (5) |
N4—Zn—O1—C19 | −40.2 (4) | C3—N2—C4—C7 | 81.4 (6) |
N2—Zn—O1—C19 | 140.4 (4) | Zn—N2—C4—C7 | −44.5 (6) |
O1—Zn—N1—C1 | −66.6 (4) | C3—N2—C4—C5 | −37.3 (7) |
N3—Zn—N1—C1 | 108.6 (3) | Zn—N2—C4—C5 | −163.1 (4) |
N4—Zn—N1—C1 | −168.7 (3) | N2—C4—C7—C8 | 63.1 (7) |
N2—Zn—N1—C1 | 18.7 (3) | C6—C4—C7—C8 | −57.4 (7) |
O1—Zn—N1—C17 | 65.2 (4) | C5—C4—C7—C8 | −175.0 (5) |
N3—Zn—N1—C17 | −119.6 (4) | C10—N3—C8—C9 | 57.6 (6) |
N4—Zn—N1—C17 | −36.9 (4) | Zn—N3—C8—C9 | −71.3 (5) |
N2—Zn—N1—C17 | 150.5 (4) | C10—N3—C8—C7 | −170.5 (4) |
O1—Zn—N2—C3 | 134.4 (3) | Zn—N3—C8—C7 | 60.6 (5) |
N3—Zn—N2—C3 | −97.6 (3) | C4—C7—C8—N3 | −71.8 (7) |
N1—Zn—N2—C3 | 12.3 (3) | C4—C7—C8—C9 | 57.1 (8) |
O1—Zn—N2—C4 | −93.4 (4) | C8—N3—C10—C11 | 65.2 (6) |
N3—Zn—N2—C4 | 34.7 (4) | Zn—N3—C10—C11 | −161.8 (4) |
N1—Zn—N2—C4 | 144.5 (4) | C8—N3—C10—C12 | −173.3 (4) |
O1—Zn—N3—C8 | 48.5 (4) | Zn—N3—C10—C12 | −40.3 (5) |
N1—Zn—N3—C8 | −126.3 (4) | C13—N4—C12—C10 | −175.8 (4) |
N4—Zn—N3—C8 | 145.0 (4) | Zn—N4—C12—C10 | −42.4 (5) |
N2—Zn—N3—C8 | −42.5 (4) | N3—C10—C12—N4 | 56.2 (5) |
O1—Zn—N3—C10 | −82.6 (4) | C11—C10—C12—N4 | 179.6 (4) |
N1—Zn—N3—C10 | 102.6 (3) | C12—N4—C13—C14 | −165.8 (4) |
N4—Zn—N3—C10 | 13.9 (3) | Zn—N4—C13—C14 | 66.3 (5) |
N2—Zn—N3—C10 | −173.6 (3) | C12—N4—C13—C16 | 72.6 (5) |
O1—Zn—N4—C12 | 143.2 (3) | Zn—N4—C13—C16 | −55.3 (5) |
N3—Zn—N4—C12 | 15.7 (3) | C12—N4—C13—C15 | −47.5 (6) |
N1—Zn—N4—C12 | −94.3 (3) | Zn—N4—C13—C15 | −175.3 (3) |
O1—Zn—N4—C13 | −84.7 (4) | N4—C13—C16—C17 | 70.6 (6) |
N3—Zn—N4—C13 | 147.8 (4) | C14—C13—C16—C17 | −47.8 (6) |
N1—Zn—N4—C13 | 37.8 (4) | C15—C13—C16—C17 | −167.9 (5) |
C17—N1—C1—C2 | −58.5 (5) | C1—N1—C17—C18 | −58.2 (6) |
Zn—N1—C1—C2 | 76.7 (4) | Zn—N1—C17—C18 | 174.0 (3) |
C17—N1—C1—C3 | 178.5 (4) | C1—N1—C17—C16 | −179.8 (4) |
Zn—N1—C1—C3 | −46.3 (4) | Zn—N1—C17—C16 | 52.3 (5) |
C4—N2—C3—C1 | −175.7 (4) | C13—C16—C17—N1 | −68.1 (6) |
Zn—N2—C3—C1 | −42.2 (5) | C13—C16—C17—C18 | 168.7 (5) |
N1—C1—C3—N2 | 62.6 (5) | Zn—O1—C19—O2 | −1.1 (7) |
C2—C1—C3—N2 | −59.5 (6) | Zn—O1—C19—C20 | −178.7 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O4 | 0.88 (4) | 2.14 (5) | 3.017 (10) | 177 (5) |
N2—H2n···O2i | 0.88 (4) | 2.60 (4) | 3.375 (6) | 147 (4) |
N3—H3n···O5 | 0.88 (3) | 2.42 (3) | 3.228 (8) | 153 (5) |
N4—H4n···O2 | 0.88 (3) | 2.25 (3) | 2.978 (6) | 140 (4) |
Symmetry code: (i) −x+2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C2H3O2)(C18H40N4)]ClO4 |
Mr | 536.40 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 153 |
a, b, c (Å) | 17.822 (6), 12.995 (6), 22.381 (7) |
V (Å3) | 5183 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.09 |
Crystal size (mm) | 0.30 × 0.11 × 0.04 |
Data collection | |
Diffractometer | Rigaku AFC12K/SATURN724 |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.602, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23785, 4534, 4080 |
Rint | 0.069 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.080, 0.183, 1.29 |
No. of reflections | 4534 |
No. of parameters | 320 |
No. of restraints | 22 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
w = 1/[σ2(Fo2) + (0.0546P)2 + 10.5654P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 0.63, −0.48 |
Computer programs: CrystalClear (Molecular Structure Corporation & Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1n···O4 | 0.88 (4) | 2.14 (5) | 3.017 (10) | 177 (5) |
N2—H2n···O2i | 0.88 (4) | 2.60 (4) | 3.375 (6) | 147 (4) |
N3—H3n···O5 | 0.88 (3) | 2.42 (3) | 3.228 (8) | 153 (5) |
N4—H4n···O2 | 0.88 (3) | 2.25 (3) | 2.978 (6) | 140 (4) |
Symmetry code: (i) −x+2, y+1/2, −z+3/2. |
Footnotes
‡Additional correspondence author, e-mail: tapashir@yahoo.com.
Acknowledgements
The authors are grateful to the Ministry of National Science, Information & Communication Technology (NSICT), Bangladesh, for the award of a research grant to TGR.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In continuation of long-terms studies of the synthesis, characterization and biological activities of methyl substituted tetraazamacrocyclic ligands and their metal complexes (Bembi et al., 1990; Roy et al., 2007; Hazari et al., 2008; Roy et al., 2011), the synthesis and crystal structure of the title complex, (I), was investigated.
The asymmetric unit of (I) comprises a ZnL(O2CMe) cation, Fig. 1, and a disordered perchlorate anion; L = 2,5,5,7,9,12,12,14-octamethyl-1,4,8,11-tetra-azacyclotetradecane. The Zn atom is five-coordinate, Table 1, within an N4O donor set derived from the four N atoms of the macrocyclic ligand and an O atom of a monodentate acetate; the Zn···O2 separation is 3.132 (4) Å. Based on the value of τ = 0.71, compared with the values of t = 0.0 and 1.0 for ideal square pyramidal and trigonal bipyramidal, respectively (Addison et al., 1984), the coordination geometry is distorted trigonal bipyramidal with the N2 and N4 atoms occupying axial positions; N2—Zn—N4 = 170.89 (16)°.
The cations in (I) are connected via weak N—H···O(acetate) hydrogen bonds, Table 1, which stabilize supramolecular helical chains along the b axis, Fig. 2; intramolecular N—H···O(acetate) hydrogen bonds are also present. The perchlorate anions associate with the chains via N—H···O interactions, also shown in Fig. 2.