organic compounds
tert-Butyl 2-{[2,8-bis(trifluoromethyl)quinolin-4-yl](hydroxy)methyl}piperidine-1-carboxylate
aFundaçaõ Oswaldo Cruz, Instituto de Tecnologia, em Fármacos–Farmanguinhos, R. Sizenando Nabuco, 100, Manguinhos, 21041-250 Rio de Janeiro, RJ, Brazil, bCentro de Desenvolvimento Tecnológico em Saúde (CDTS), Fundação Oswaldo Cruz (FIOCRUZ), Casa Amarela, Campus de Manguinhos, Av. Brasil 4365, 21040-900 Rio de Janeiro, RJ, Brazil, cCHEMSOL, 1 Harcourt Road, Aberdeen AB15 5NY, Scotland, and dDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
The title molecule, C22H24F6N2O3, adopts a folded conformation whereby the carboxylate residue lies over the quinolinyl residue, with the dihedral angle between the carbamate and quinoline planes being 41.64 (7)°. Helical supramolecular C(7) chains sustained by O—H⋯O hydrogen bonds propagating along the a-axis direction feature in the crystal packing. The F atoms of one of the CF3 groups are disordered over two orientations; the major component has a site occupancy of 0.824 (7).
Related literature
For background to the anti-mycobacterial activity of mefloquine, see: Gonçalves et al. (2010); Mao et al. (2007); Maguire et al. (2006). For the synthesis, see: Grellepois et al. (2005). For related structural studies, see: Gonçalves et al. (2011); de Souza et al. (2011); Wardell et al. (2010, 2011a,b); Pitaluga et al. (2010).
Experimental
Crystal data
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Data collection: CrystalClear-SM Expert (Rigaku, 2011); cell CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536811047726/hb6499sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811047726/hb6499Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536811047726/hb6499Isup3.cml
The compound was prepared by a published procedure (Grellepois et al., 2005) from Boc2O and mefloquine in the presence of Et3N. Colourless chips of (I) were grown from an EtOH solution, M.pt. 419–420 K.
The C-bound H atoms were geometrically placed (C—H = 0.95–1.00 Å) and refined as riding with Uiso(H) = 1.2–1.5Ueq(C). The O—H H atom was located in a difference and refined with O—H = 0.84±0.01 Å, and with Uiso(H) = 1.5Ueq(O). One of the CF3 groups was found to be disordered. This was resolved over two positions for each F atom. The pairs of F atom had common anisotropic displacement parameters. The major component of the disordered F atoms had a site occupancy = 0.824 (7).
Mefloquine has been used in the prevention and treatment for malaria in combination with other drugs for some decades (Maguire et al., 2006). More recently, the activity of mefloquine has been investigated against other diseases, for example, as anti-viral and anti-tubercular agents (Mao et al., 2007). In continuation of our structural and biological studies on mefloquine derivatives (Gonçalves et al., 2010, 2011; de Souza et al. 2011; Wardell, et al., 2010; 2011a; 2011b; Pitaluga et al., 2010), we now report the crystal and molecular structure of the title compound, tert-butyl 2-[[2,8-bis(trifluoromethyl)-4-quinolinyl](hydroxy)methyl]tetrahydro-1(2H)-pyridine carboxylate, (I).
In the molecule of (I), Fig. 1, the hydroxyl group lies to one side of the plane through the quinolinyl residue and the substituted piperidine ring to other with the carboxylate ester folded over to lie over the quinolinyl plane. However, the two residues are non-parallel with the dihedral angle between the quinolinyl and carbamate planes being 41.64 (7) °. The piperidine ring has a conformation close to a chair form. Mefloquine used as a reagent was a racemate. However, the reported
is of one form of a as the molecules spontaneously resolved during crystallization. The sum of the angles at the site of substitution, the trisubstituted N2 atom, is 360° indicating a planar geometry, and hence an achiral centre. In (I), the configurations at the C12 and C13 positions are R and S, respectively. The most prominent intermolecular interactions in the are O—H···O hydrogen bonds that lead to helical supramolecular chains along the a axis, Fig. 1 and Table 1.For background to the anti-mycobacterial activity of mefloquine, see: Gonçalves et al. (2010); Mao et al. (2007); Maguire et al. (2006). For the synthesis, see: Grellepois et al. (2005). For related structural studies, see: Gonçalves et al. (2011); de Souza et al. (2011); Wardell et al. (2010, 2011a,b); Pitaluga et al. (2010).
Data collection: CrystalClear-SM Expert (Rigaku, 2011); cell
CrystalClear-SM Expert (Rigaku, 2011); data reduction: CrystalClear-SM Expert (Rigaku, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C22H24F6N2O3 | F(000) = 992 |
Mr = 478.43 | Dx = 1.420 Mg m−3 |
Orthorhombic, P212121 | Cu Kα radiation, λ = 1.54187 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 2676 reflections |
a = 9.888 (3) Å | θ = 21.7–66.3° |
b = 10.696 (3) Å | µ = 1.12 mm−1 |
c = 21.158 (5) Å | T = 100 K |
V = 2237.7 (10) Å3 | Chip, colourless |
Z = 4 | 0.12 × 0.11 × 0.10 mm |
Rigaku Saturn944+ diffractometer | 3722 independent reflections |
Radiation source: fine-focus sealed tube | 3640 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.037 |
Detector resolution: 22.2222 pixels mm-1 | θmax = 66.5°, θmin = 4.9° |
profile data from ω–scans | h = −11→11 |
Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2011) | k = −11→12 |
Tmin = 0.863, Tmax = 1.000 | l = −25→24 |
10899 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.054 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.130 | w = 1/[σ2(Fo2) + (0.0998P)2 + 0.2114P] where P = (Fo2 + 2Fc2)/3 |
S = 1.13 | (Δ/σ)max < 0.001 |
3722 reflections | Δρmax = 0.37 e Å−3 |
314 parameters | Δρmin = −0.44 e Å−3 |
31 restraints | Absolute structure: Flack (1983), 1532 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.08 (13) |
C22H24F6N2O3 | V = 2237.7 (10) Å3 |
Mr = 478.43 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 9.888 (3) Å | µ = 1.12 mm−1 |
b = 10.696 (3) Å | T = 100 K |
c = 21.158 (5) Å | 0.12 × 0.11 × 0.10 mm |
Rigaku Saturn944+ diffractometer | 3722 independent reflections |
Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2011) | 3640 reflections with I > 2σ(I) |
Tmin = 0.863, Tmax = 1.000 | Rint = 0.037 |
10899 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.130 | Δρmax = 0.37 e Å−3 |
S = 1.13 | Δρmin = −0.44 e Å−3 |
3722 reflections | Absolute structure: Flack (1983), 1532 Friedel pairs |
314 parameters | Absolute structure parameter: −0.08 (13) |
31 restraints |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C10 | 0.2018 (3) | −0.0161 (2) | 0.10080 (11) | 0.0390 (6) | 0.824 (7) |
F1 | 0.1438 (3) | −0.0585 (4) | 0.04787 (14) | 0.0360 (7) | 0.824 (7) |
F2 | 0.0959 (3) | −0.0005 (3) | 0.14211 (13) | 0.0639 (10) | 0.824 (7) |
F3 | 0.2775 (3) | −0.1073 (2) | 0.1234 (2) | 0.0713 (10) | 0.824 (7) |
C10' | 0.2018 (3) | −0.0161 (2) | 0.10080 (11) | 0.0390 (6) | 0.176 (7) |
F1' | 0.1146 (16) | −0.050 (2) | 0.0558 (8) | 0.0360 (7) | 0.176 (7) |
F2' | 0.1618 (18) | −0.0399 (15) | 0.1586 (3) | 0.0639 (10) | 0.176 (7) |
F3' | 0.3022 (11) | −0.1023 (11) | 0.0948 (8) | 0.0713 (10) | 0.176 (7) |
F4 | 0.36443 (14) | 0.19344 (13) | 0.26991 (6) | 0.0295 (3) | |
F5 | 0.55029 (14) | 0.10401 (13) | 0.24085 (6) | 0.0304 (3) | |
F6 | 0.55644 (16) | 0.27288 (15) | 0.29575 (6) | 0.0368 (4) | |
O1 | 0.31994 (19) | 0.27116 (16) | −0.08675 (7) | 0.0322 (4) | |
H1o | 0.387 (3) | 0.222 (3) | −0.0866 (17) | 0.058* | |
O2 | 0.05287 (17) | 0.37519 (15) | 0.07601 (7) | 0.0294 (4) | |
O3 | 0.11139 (19) | 0.56561 (16) | 0.11565 (8) | 0.0303 (4) | |
N1 | 0.3449 (2) | 0.14152 (17) | 0.14112 (8) | 0.0235 (4) | |
N2 | 0.1754 (2) | 0.51397 (18) | 0.01744 (8) | 0.0257 (4) | |
C1 | 0.2766 (2) | 0.1044 (2) | 0.09080 (11) | 0.0265 (5) | |
C2 | 0.2698 (2) | 0.1688 (2) | 0.03333 (11) | 0.0270 (5) | |
H2 | 0.2194 | 0.1357 | −0.0011 | 0.032* | |
C3 | 0.3375 (2) | 0.2811 (2) | 0.02730 (9) | 0.0219 (5) | |
C4 | 0.4146 (2) | 0.3242 (2) | 0.07962 (10) | 0.0199 (4) | |
C5 | 0.4941 (2) | 0.4353 (2) | 0.07868 (10) | 0.0226 (4) | |
H5 | 0.4952 | 0.4858 | 0.0417 | 0.027* | |
C6 | 0.5686 (2) | 0.4702 (2) | 0.13000 (11) | 0.0273 (5) | |
H6 | 0.6216 | 0.5442 | 0.1282 | 0.033* | |
C7 | 0.5678 (2) | 0.3978 (2) | 0.18567 (10) | 0.0250 (5) | |
H7 | 0.6201 | 0.4232 | 0.2211 | 0.030* | |
C8 | 0.4923 (2) | 0.2916 (2) | 0.18890 (9) | 0.0228 (5) | |
C9 | 0.4150 (2) | 0.2504 (2) | 0.13550 (9) | 0.0202 (4) | |
C11 | 0.4905 (2) | 0.2163 (2) | 0.24812 (10) | 0.0249 (5) | |
C12 | 0.3230 (2) | 0.3538 (2) | −0.03392 (10) | 0.0239 (5) | |
H12 | 0.3999 | 0.4139 | −0.0385 | 0.029* | |
C13 | 0.1870 (2) | 0.4255 (2) | −0.03579 (10) | 0.0251 (5) | |
H13 | 0.1130 | 0.3625 | −0.0311 | 0.030* | |
C14 | 0.2429 (3) | 0.6364 (2) | 0.01233 (11) | 0.0313 (5) | |
H14A | 0.3419 | 0.6247 | 0.0165 | 0.038* | |
H14B | 0.2125 | 0.6908 | 0.0474 | 0.038* | |
C15 | 0.2123 (3) | 0.7003 (2) | −0.05050 (12) | 0.0374 (6) | |
H15A | 0.1154 | 0.7233 | −0.0522 | 0.045* | |
H15B | 0.2663 | 0.7779 | −0.0541 | 0.045* | |
C16 | 0.2459 (3) | 0.6138 (2) | −0.10499 (12) | 0.0363 (6) | |
H16A | 0.3438 | 0.5946 | −0.1047 | 0.044* | |
H16B | 0.2239 | 0.6553 | −0.1455 | 0.044* | |
C17 | 0.1649 (3) | 0.4927 (2) | −0.09901 (11) | 0.0314 (5) | |
H17A | 0.1908 | 0.4358 | −0.1339 | 0.038* | |
H17B | 0.0675 | 0.5121 | −0.1037 | 0.038* | |
C18 | 0.1084 (2) | 0.4769 (2) | 0.07035 (10) | 0.0257 (5) | |
C19 | 0.0610 (2) | 0.5418 (2) | 0.18031 (10) | 0.0281 (5) | |
C20 | 0.1404 (3) | 0.4359 (3) | 0.20999 (12) | 0.0363 (6) | |
H20A | 0.2374 | 0.4523 | 0.2055 | 0.054* | |
H20B | 0.1177 | 0.3572 | 0.1887 | 0.054* | |
H20C | 0.1173 | 0.4296 | 0.2549 | 0.054* | |
C21 | −0.0903 (3) | 0.5172 (3) | 0.17923 (13) | 0.0397 (6) | |
H21A | −0.1256 | 0.5193 | 0.2225 | 0.060* | |
H21B | −0.1075 | 0.4348 | 0.1606 | 0.060* | |
H21C | −0.1353 | 0.5816 | 0.1539 | 0.060* | |
C22 | 0.0909 (3) | 0.6644 (3) | 0.21311 (13) | 0.0385 (6) | |
H22A | 0.1879 | 0.6824 | 0.2103 | 0.058* | |
H22B | 0.0643 | 0.6586 | 0.2576 | 0.058* | |
H22C | 0.0398 | 0.7317 | 0.1926 | 0.058* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C10 | 0.0500 (15) | 0.0332 (13) | 0.0339 (12) | −0.0136 (12) | −0.0226 (12) | 0.0086 (11) |
F1 | 0.0424 (15) | 0.0259 (10) | 0.0397 (11) | −0.0088 (13) | −0.0189 (12) | 0.0016 (9) |
F2 | 0.073 (2) | 0.0671 (17) | 0.0510 (13) | −0.0439 (16) | 0.0102 (13) | −0.0066 (12) |
F3 | 0.0817 (16) | 0.0321 (10) | 0.100 (2) | −0.0239 (10) | −0.0659 (17) | 0.0395 (14) |
C10' | 0.0500 (15) | 0.0332 (13) | 0.0339 (12) | −0.0136 (12) | −0.0226 (12) | 0.0086 (11) |
F1' | 0.0424 (15) | 0.0259 (10) | 0.0397 (11) | −0.0088 (13) | −0.0189 (12) | 0.0016 (9) |
F2' | 0.073 (2) | 0.0671 (17) | 0.0510 (13) | −0.0439 (16) | 0.0102 (13) | −0.0066 (12) |
F3' | 0.0817 (16) | 0.0321 (10) | 0.100 (2) | −0.0239 (10) | −0.0659 (17) | 0.0395 (14) |
F4 | 0.0283 (7) | 0.0378 (8) | 0.0224 (6) | 0.0013 (6) | 0.0021 (5) | 0.0022 (5) |
F5 | 0.0321 (7) | 0.0321 (7) | 0.0269 (6) | 0.0082 (6) | −0.0020 (6) | 0.0041 (5) |
F6 | 0.0436 (8) | 0.0447 (8) | 0.0222 (6) | −0.0058 (7) | −0.0129 (6) | −0.0034 (6) |
O1 | 0.0443 (10) | 0.0316 (9) | 0.0205 (7) | 0.0090 (7) | −0.0063 (7) | −0.0056 (7) |
O2 | 0.0323 (8) | 0.0267 (8) | 0.0292 (8) | −0.0045 (7) | 0.0027 (7) | 0.0001 (7) |
O3 | 0.0389 (9) | 0.0275 (8) | 0.0246 (8) | −0.0020 (7) | 0.0071 (7) | −0.0027 (6) |
N1 | 0.0260 (9) | 0.0208 (9) | 0.0237 (8) | −0.0023 (7) | −0.0064 (8) | 0.0003 (7) |
N2 | 0.0317 (10) | 0.0225 (9) | 0.0229 (9) | −0.0001 (8) | 0.0029 (8) | 0.0004 (8) |
C1 | 0.0306 (11) | 0.0230 (11) | 0.0259 (10) | −0.0030 (9) | −0.0095 (9) | 0.0006 (8) |
C2 | 0.0312 (11) | 0.0248 (11) | 0.0250 (10) | −0.0013 (9) | −0.0091 (9) | −0.0005 (9) |
C3 | 0.0246 (10) | 0.0211 (10) | 0.0199 (10) | 0.0013 (9) | −0.0028 (8) | −0.0022 (8) |
C4 | 0.0192 (9) | 0.0193 (10) | 0.0211 (9) | 0.0024 (8) | 0.0019 (8) | −0.0026 (8) |
C5 | 0.0229 (10) | 0.0228 (10) | 0.0221 (9) | 0.0001 (9) | 0.0017 (8) | 0.0006 (8) |
C6 | 0.0255 (11) | 0.0260 (11) | 0.0304 (11) | −0.0058 (9) | 0.0017 (9) | −0.0031 (9) |
C7 | 0.0239 (10) | 0.0284 (12) | 0.0226 (9) | −0.0024 (9) | −0.0037 (8) | −0.0070 (9) |
C8 | 0.0214 (10) | 0.0257 (11) | 0.0213 (10) | 0.0012 (9) | −0.0008 (8) | −0.0035 (8) |
C9 | 0.0184 (9) | 0.0215 (10) | 0.0207 (9) | 0.0014 (8) | −0.0009 (8) | −0.0023 (8) |
C11 | 0.0247 (10) | 0.0300 (11) | 0.0201 (10) | −0.0012 (9) | −0.0025 (8) | −0.0018 (8) |
C12 | 0.0306 (11) | 0.0220 (11) | 0.0190 (9) | 0.0014 (9) | −0.0022 (9) | −0.0012 (8) |
C13 | 0.0298 (11) | 0.0232 (12) | 0.0223 (10) | −0.0005 (9) | −0.0036 (9) | −0.0004 (8) |
C14 | 0.0389 (13) | 0.0224 (11) | 0.0326 (11) | 0.0000 (10) | 0.0024 (10) | 0.0025 (9) |
C15 | 0.0451 (14) | 0.0284 (13) | 0.0388 (13) | 0.0025 (11) | 0.0041 (11) | 0.0102 (11) |
C16 | 0.0454 (14) | 0.0337 (14) | 0.0298 (12) | 0.0023 (12) | 0.0025 (11) | 0.0120 (10) |
C17 | 0.0362 (12) | 0.0341 (13) | 0.0241 (10) | 0.0065 (11) | −0.0047 (10) | 0.0024 (9) |
C18 | 0.0270 (10) | 0.0238 (11) | 0.0262 (10) | 0.0025 (9) | −0.0001 (9) | −0.0009 (9) |
C19 | 0.0257 (11) | 0.0353 (13) | 0.0233 (10) | 0.0002 (10) | 0.0035 (9) | −0.0002 (9) |
C20 | 0.0407 (14) | 0.0378 (14) | 0.0305 (11) | 0.0052 (11) | −0.0030 (11) | 0.0020 (10) |
C21 | 0.0269 (12) | 0.0556 (17) | 0.0365 (13) | 0.0004 (12) | 0.0037 (10) | −0.0108 (12) |
C22 | 0.0416 (14) | 0.0395 (14) | 0.0344 (12) | −0.0026 (12) | 0.0052 (11) | −0.0119 (11) |
C10—F3 | 1.319 (3) | C7—C8 | 1.361 (3) |
C10—F1 | 1.338 (3) | C7—H7 | 0.9500 |
C10—F2 | 1.374 (3) | C8—C9 | 1.433 (3) |
C10—C1 | 1.501 (3) | C8—C11 | 1.490 (3) |
C10'—F1' | 1.335 (5) | C12—C13 | 1.548 (3) |
C10'—F2' | 1.310 (5) | C12—H12 | 1.0000 |
C10'—C1 | 1.501 (3) | C13—C17 | 1.534 (3) |
C10'—F3' | 1.360 (5) | C13—H13 | 1.0000 |
F4—C11 | 1.352 (3) | C14—C15 | 1.526 (3) |
F5—C11 | 1.347 (3) | C14—H14A | 0.9900 |
F6—C11 | 1.344 (3) | C14—H14B | 0.9900 |
O1—C12 | 1.425 (3) | C15—C16 | 1.515 (4) |
O1—H1O | 0.843 (11) | C15—H15A | 0.9900 |
O2—C18 | 1.225 (3) | C15—H15B | 0.9900 |
O3—C18 | 1.349 (3) | C16—C17 | 1.527 (4) |
O3—C19 | 1.478 (3) | C16—H16A | 0.9900 |
N1—C1 | 1.322 (3) | C16—H16B | 0.9900 |
N1—C9 | 1.361 (3) | C17—H17A | 0.9900 |
N2—C18 | 1.360 (3) | C17—H17B | 0.9900 |
N2—C14 | 1.474 (3) | C19—C22 | 1.513 (4) |
N2—C13 | 1.476 (3) | C19—C20 | 1.515 (4) |
C1—C2 | 1.399 (3) | C19—C21 | 1.519 (4) |
C2—C3 | 1.381 (3) | C20—H20A | 0.9800 |
C2—H2 | 0.9500 | C20—H20B | 0.9800 |
C3—C4 | 1.421 (3) | C20—H20C | 0.9800 |
C3—C12 | 1.517 (3) | C21—H21A | 0.9800 |
C4—C9 | 1.422 (3) | C21—H21B | 0.9800 |
C4—C5 | 1.425 (3) | C21—H21C | 0.9800 |
C5—C6 | 1.364 (3) | C22—H22A | 0.9800 |
C5—H5 | 0.9500 | C22—H22B | 0.9800 |
C6—C7 | 1.410 (3) | C22—H22C | 0.9800 |
C6—H6 | 0.9500 | ||
F3—C10—F1 | 107.2 (3) | C13—C12—H12 | 109.8 |
F3—C10—F2 | 106.9 (3) | N2—C13—C17 | 110.70 (18) |
F1—C10—F2 | 104.3 (2) | N2—C13—C12 | 111.47 (18) |
F3—C10—C1 | 114.1 (2) | C17—C13—C12 | 112.22 (19) |
F1—C10—C1 | 112.6 (3) | N2—C13—H13 | 107.4 |
F2—C10—C1 | 111.2 (2) | C17—C13—H13 | 107.4 |
F1'—C10'—F2' | 114.7 (11) | C12—C13—H13 | 107.4 |
F1'—C10'—C1 | 116.8 (12) | N2—C14—C15 | 111.9 (2) |
F2'—C10'—C1 | 116.6 (6) | N2—C14—H14A | 109.2 |
F1'—C10'—F3' | 102.8 (10) | C15—C14—H14A | 109.2 |
F2'—C10'—F3' | 100.1 (8) | N2—C14—H14B | 109.2 |
C1—C10'—F3' | 102.1 (7) | C15—C14—H14B | 109.2 |
C12—O1—H1O | 111 (3) | H14A—C14—H14B | 107.9 |
C18—O3—C19 | 121.93 (18) | C16—C15—C14 | 110.2 (2) |
C1—N1—C9 | 116.55 (18) | C16—C15—H15A | 109.6 |
C18—N2—C14 | 122.69 (18) | C14—C15—H15A | 109.6 |
C18—N2—C13 | 118.66 (19) | C16—C15—H15B | 109.6 |
C14—N2—C13 | 118.57 (17) | C14—C15—H15B | 109.6 |
N1—C1—C2 | 125.2 (2) | H15A—C15—H15B | 108.1 |
N1—C1—C10' | 113.32 (18) | C15—C16—C17 | 109.9 (2) |
C2—C1—C10' | 121.47 (19) | C15—C16—H16A | 109.7 |
N1—C1—C10 | 113.32 (18) | C17—C16—H16A | 109.7 |
C2—C1—C10 | 121.47 (19) | C15—C16—H16B | 109.7 |
C3—C2—C1 | 119.1 (2) | C17—C16—H16B | 109.7 |
C3—C2—H2 | 120.5 | H16A—C16—H16B | 108.2 |
C1—C2—H2 | 120.5 | C16—C17—C13 | 113.3 (2) |
C2—C3—C4 | 118.04 (19) | C16—C17—H17A | 108.9 |
C2—C3—C12 | 118.62 (19) | C13—C17—H17A | 108.9 |
C4—C3—C12 | 123.32 (19) | C16—C17—H17B | 108.9 |
C3—C4—C9 | 117.99 (19) | C13—C17—H17B | 108.9 |
C3—C4—C5 | 123.76 (19) | H17A—C17—H17B | 107.7 |
C9—C4—C5 | 118.23 (18) | O2—C18—O3 | 124.4 (2) |
C6—C5—C4 | 121.0 (2) | O2—C18—N2 | 123.9 (2) |
C6—C5—H5 | 119.5 | O3—C18—N2 | 111.7 (2) |
C4—C5—H5 | 119.5 | O3—C19—C22 | 102.08 (19) |
C5—C6—C7 | 120.8 (2) | O3—C19—C20 | 109.75 (19) |
C5—C6—H6 | 119.6 | C22—C19—C20 | 110.9 (2) |
C7—C6—H6 | 119.6 | O3—C19—C21 | 110.4 (2) |
C8—C7—C6 | 120.2 (2) | C22—C19—C21 | 110.4 (2) |
C8—C7—H7 | 119.9 | C20—C19—C21 | 112.8 (2) |
C6—C7—H7 | 119.9 | C19—C20—H20A | 109.5 |
C7—C8—C9 | 120.6 (2) | C19—C20—H20B | 109.5 |
C7—C8—C11 | 119.99 (19) | H20A—C20—H20B | 109.5 |
C9—C8—C11 | 119.39 (19) | C19—C20—H20C | 109.5 |
N1—C9—C4 | 123.13 (18) | H20A—C20—H20C | 109.5 |
N1—C9—C8 | 117.76 (18) | H20B—C20—H20C | 109.5 |
C4—C9—C8 | 119.12 (19) | C19—C21—H21A | 109.5 |
F6—C11—F5 | 105.93 (18) | C19—C21—H21B | 109.5 |
F6—C11—F4 | 105.84 (18) | H21A—C21—H21B | 109.5 |
F5—C11—F4 | 106.39 (18) | C19—C21—H21C | 109.5 |
F6—C11—C8 | 112.43 (19) | H21A—C21—H21C | 109.5 |
F5—C11—C8 | 112.38 (18) | H21B—C21—H21C | 109.5 |
F4—C11—C8 | 113.30 (18) | C19—C22—H22A | 109.5 |
O1—C12—C3 | 110.71 (18) | C19—C22—H22B | 109.5 |
O1—C12—C13 | 105.59 (17) | H22A—C22—H22B | 109.5 |
C3—C12—C13 | 110.95 (18) | C19—C22—H22C | 109.5 |
O1—C12—H12 | 109.8 | H22A—C22—H22C | 109.5 |
C3—C12—H12 | 109.8 | H22B—C22—H22C | 109.5 |
C9—N1—C1—C2 | −0.8 (3) | C3—C4—C9—C8 | 179.82 (19) |
C9—N1—C1—C10' | −179.89 (19) | C5—C4—C9—C8 | 1.4 (3) |
C9—N1—C1—C10 | −179.89 (19) | C7—C8—C9—N1 | 178.1 (2) |
F1'—C10'—C1—N1 | 170.2 (10) | C11—C8—C9—N1 | −1.4 (3) |
F2'—C10'—C1—N1 | 29.4 (10) | C7—C8—C9—C4 | −2.1 (3) |
F3'—C10'—C1—N1 | −78.6 (7) | C11—C8—C9—C4 | 178.51 (19) |
F1'—C10'—C1—C2 | −8.9 (10) | C7—C8—C11—F6 | 6.8 (3) |
F2'—C10'—C1—C2 | −149.7 (10) | C9—C8—C11—F6 | −173.75 (19) |
F3'—C10'—C1—C2 | 102.3 (7) | C7—C8—C11—F5 | −112.6 (2) |
F1'—C10'—C1—C10 | 0 (100) | C9—C8—C11—F5 | 66.8 (3) |
F2'—C10'—C1—C10 | 0 (98) | C7—C8—C11—F4 | 126.8 (2) |
F3'—C10'—C1—C10 | 0 (54) | C9—C8—C11—F4 | −53.8 (3) |
F3—C10—C1—N1 | −51.6 (4) | C2—C3—C12—O1 | −38.0 (3) |
F1—C10—C1—N1 | −174.0 (3) | C4—C3—C12—O1 | 143.6 (2) |
F2—C10—C1—N1 | 69.4 (3) | C2—C3—C12—C13 | 78.9 (2) |
F3—C10—C1—C2 | 129.3 (3) | C4—C3—C12—C13 | −99.5 (2) |
F1—C10—C1—C2 | 6.9 (4) | C18—N2—C13—C17 | 138.6 (2) |
F2—C10—C1—C2 | −109.7 (3) | C14—N2—C13—C17 | −44.6 (3) |
F3—C10—C1—C10' | 0 (16) | C18—N2—C13—C12 | −95.8 (2) |
F1—C10—C1—C10' | 0 (100) | C14—N2—C13—C12 | 81.1 (2) |
F2—C10—C1—C10' | 0 (100) | O1—C12—C13—N2 | 179.09 (17) |
N1—C1—C2—C3 | −0.8 (4) | C3—C12—C13—N2 | 59.1 (2) |
C10'—C1—C2—C3 | 178.2 (2) | O1—C12—C13—C17 | −56.1 (2) |
C10—C1—C2—C3 | 178.2 (2) | C3—C12—C13—C17 | −176.08 (19) |
C1—C2—C3—C4 | 1.9 (3) | C18—N2—C14—C15 | −134.8 (2) |
C1—C2—C3—C12 | −176.6 (2) | C13—N2—C14—C15 | 48.5 (3) |
C2—C3—C4—C9 | −1.3 (3) | N2—C14—C15—C16 | −53.7 (3) |
C12—C3—C4—C9 | 177.02 (19) | C14—C15—C16—C17 | 58.2 (3) |
C2—C3—C4—C5 | 177.0 (2) | C15—C16—C17—C13 | −56.3 (3) |
C12—C3—C4—C5 | −4.7 (3) | N2—C13—C17—C16 | 47.6 (3) |
C3—C4—C5—C6 | −178.4 (2) | C12—C13—C17—C16 | −77.6 (2) |
C9—C4—C5—C6 | −0.1 (3) | C19—O3—C18—O2 | 7.6 (3) |
C4—C5—C6—C7 | −0.6 (3) | C19—O3—C18—N2 | −172.07 (19) |
C5—C6—C7—C8 | 0.0 (3) | C14—N2—C18—O2 | −179.1 (2) |
C6—C7—C8—C9 | 1.3 (3) | C13—N2—C18—O2 | −2.4 (3) |
C6—C7—C8—C11 | −179.2 (2) | C14—N2—C18—O3 | 0.6 (3) |
C1—N1—C9—C4 | 1.4 (3) | C13—N2—C18—O3 | 177.28 (18) |
C1—N1—C9—C8 | −178.7 (2) | C18—O3—C19—C22 | 177.8 (2) |
C3—C4—C9—N1 | −0.3 (3) | C18—O3—C19—C20 | 60.1 (3) |
C5—C4—C9—N1 | −178.73 (19) | C18—O3—C19—C21 | −64.8 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···O2i | 0.85 (3) | 1.96 (3) | 2.794 (3) | 171 (3) |
Symmetry code: (i) x+1/2, −y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C22H24F6N2O3 |
Mr | 478.43 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 100 |
a, b, c (Å) | 9.888 (3), 10.696 (3), 21.158 (5) |
V (Å3) | 2237.7 (10) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 1.12 |
Crystal size (mm) | 0.12 × 0.11 × 0.10 |
Data collection | |
Diffractometer | Rigaku Saturn944+ |
Absorption correction | Multi-scan (CrystalClear-SM Expert; Rigaku, 2011) |
Tmin, Tmax | 0.863, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10899, 3722, 3640 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.130, 1.13 |
No. of reflections | 3722 |
No. of parameters | 314 |
No. of restraints | 31 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.37, −0.44 |
Absolute structure | Flack (1983), 1532 Friedel pairs |
Absolute structure parameter | −0.08 (13) |
Computer programs: CrystalClear-SM Expert (Rigaku, 2011), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1o···O2i | 0.85 (3) | 1.96 (3) | 2.794 (3) | 171 (3) |
Symmetry code: (i) x+1/2, −y+1/2, −z. |
Footnotes
‡Additional correspondence author, e-mail: j.wardell@abdn.ac.uk.
Acknowledgements
The use of the EPSRC X-ray crystallographic service at the University of Southampton, England and the valuable assistance of the staff there is gratefully acknowledged. JLW acknowledges support from CAPES and FAPEMIG (Brazil).
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Mefloquine has been used in the prevention and treatment for malaria in combination with other drugs for some decades (Maguire et al., 2006). More recently, the activity of mefloquine has been investigated against other diseases, for example, as anti-viral and anti-tubercular agents (Mao et al., 2007). In continuation of our structural and biological studies on mefloquine derivatives (Gonçalves et al., 2010, 2011; de Souza et al. 2011; Wardell, et al., 2010; 2011a; 2011b; Pitaluga et al., 2010), we now report the crystal and molecular structure of the title compound, tert-butyl 2-[[2,8-bis(trifluoromethyl)-4-quinolinyl](hydroxy)methyl]tetrahydro-1(2H)-pyridine carboxylate, (I).
In the molecule of (I), Fig. 1, the hydroxyl group lies to one side of the plane through the quinolinyl residue and the substituted piperidine ring to other with the carboxylate ester folded over to lie over the quinolinyl plane. However, the two residues are non-parallel with the dihedral angle between the quinolinyl and carbamate planes being 41.64 (7) °. The piperidine ring has a conformation close to a chair form. Mefloquine used as a reagent was a racemate. However, the reported crystal structure is of one form of a racemic mixture as the molecules spontaneously resolved during crystallization. The sum of the angles at the site of substitution, the trisubstituted N2 atom, is 360° indicating a planar geometry, and hence an achiral centre. In (I), the configurations at the C12 and C13 positions are R and S, respectively. The most prominent intermolecular interactions in the crystal structure are O—H···O hydrogen bonds that lead to helical supramolecular chains along the a axis, Fig. 1 and Table 1.