organic compounds
4-Hydroxy-3-methoxybenzaldehyde–nicotinamide (1/1)
aDepartment of Biomedical Sciences, Kulliyah of Science, IIUM Kuantan, Jalan Sultan Ahmad Shah, Bandar Indera Mahkota, 25200 Kuantan, Pahang Darul Makmur, Malaysia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: khaledi@siswa.um.edu.my
In the title compound, C6H6N2O·C8H8O3, an equimolar of nicotinamide and vanillin, the aromatic ring and the amide fragment of the nicotinamide molecule make a dihedral angle of 32.6 (2)°. The vanillin molecule is almost planar, with an r.m.s. deviation for all non-H atoms of 0.0094 Å. The vaniline and nicotinamide aromatic rings are nearly coplanar, the dihedral angle between them being 3.20 (9)°. In the crystal, the two components are linked through N—H⋯O and O—H⋯N hydrogen bonds into chains along the a axis. The chains are connected via C—H⋯O interactions, forming a three-dimensional polymeric structure.
Related literature
For the et al. (1999); Li et al. (2011). For the structure of vanillin, see: Velavan et al. (1995).
of nicotinamide, see: MiwaExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536811045648/pv2471sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536811045648/pv2471Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536811045648/pv2471Isup3.cml
A mixture of vanillin (1.52 g, 0.1 mol) and nicotinamide (1.22 g, 0.1 mol) in ethanol (30 ml) was heated for 1 hr. The solvent was then evaporated partially and the solution was left at room temperature. The colorless crystals of the title compound were obtained in a day.
The C-bound H atoms were placed at calculated positions and were treated as riding on their parent C atoms with C—H distances of 0.95 (aryl) and 0.98 (methyl) Å. The N– and O-bound H atoms were located in a difference Fourier map, and refined with distance restraints of O—H = 0.84 (2) Å and N—H = 0.88 (2) Å. For all H atoms, Uiso(H) was set to 1.2–1.5eq(carrier atom). An additional rigid-bond type restraint (DELU in SHELXL97) was placed on the displacement parameters of C1 and C2.
The crystal structures of nicotinamide (Miwa et al.,1999; Li et al., 2011) and 4-hydroxy-3-methoxybenzaldehyde, vanillin, (Velavan et al.,1995) have been previously reported. The title compound is an equimolar cocrystal of nicotinamide and vanillin (Fig. 1). The nicotinamide aromatic ring and the plane of the amide fragment, N1—C9—O4, are twisted with respect to each other, making a dihedral angle of 32.6 (2)°. The vanillin molecule is essentially planar, the highest deviation from the best plane passing through all non-H atoms being 0.0156 (13) Å for O3 atom. In the crystal, the molecules of nicotinamide and vanillin are linked through N—H···O and O—H···N hydrogen bonds into infinite chains along the a axis (Fig. 2). The chains are connected via C—H···O interactions (Table 1 and Fig. 2) to form a three-dimensional polymeric structure.
For the
of nicotinamide, see: Miwa et al. (1999); Li et al. (2011). For the structure of vanillin, see: Velavan et al. (1995).Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).Fig. 1. Molecular structure of the title compound with displacement ellipsoids drawn at 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radii. | |
Fig. 2. A chain along the a axis formed by N—H···O and O—H···N hydrogen bonds. |
C6H6N2O·C8H8O3 | Z = 2 |
Mr = 274.27 | F(000) = 288 |
Triclinic, P1 | Dx = 1.429 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 4.8979 (1) Å | Cell parameters from 1226 reflections |
b = 8.5440 (2) Å | θ = 2.6–29.7° |
c = 15.4713 (4) Å | µ = 0.11 mm−1 |
α = 98.108 (1)° | T = 100 K |
β = 92.810 (2)° | Lath, colorless |
γ = 94.784 (2)° | 0.22 × 0.14 × 0.04 mm |
V = 637.52 (3) Å3 |
Bruker APEXII CCD diffractometer | 2243 independent reflections |
Radiation source: fine-focus sealed tube | 1862 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
φ and ω scans | θmax = 25.3°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −5→5 |
Tmin = 0.977, Tmax = 0.996 | k = −10→10 |
3432 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0439P)2 + 0.4685P] where P = (Fo2 + 2Fc2)/3 |
2243 reflections | (Δ/σ)max < 0.001 |
191 parameters | Δρmax = 0.66 e Å−3 |
4 restraints | Δρmin = −0.28 e Å−3 |
C6H6N2O·C8H8O3 | γ = 94.784 (2)° |
Mr = 274.27 | V = 637.52 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 4.8979 (1) Å | Mo Kα radiation |
b = 8.5440 (2) Å | µ = 0.11 mm−1 |
c = 15.4713 (4) Å | T = 100 K |
α = 98.108 (1)° | 0.22 × 0.14 × 0.04 mm |
β = 92.810 (2)° |
Bruker APEXII CCD diffractometer | 2243 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1862 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.996 | Rint = 0.019 |
3432 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 4 restraints |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.66 e Å−3 |
2243 reflections | Δρmin = −0.28 e Å−3 |
191 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3651 (3) | 0.83011 (19) | 0.61085 (10) | 0.0359 (4) | |
O2 | 0.8107 (3) | 0.63328 (16) | 0.23075 (9) | 0.0195 (3) | |
H2 | 0.949 (4) | 0.698 (2) | 0.2250 (15) | 0.029* | |
O3 | 0.4028 (3) | 0.44026 (16) | 0.25734 (9) | 0.0218 (3) | |
C1 | 0.3070 (5) | 0.7306 (3) | 0.54863 (14) | 0.0286 (5) | |
H1 | 0.1529 | 0.6570 | 0.5522 | 0.034* | |
C2 | 0.4516 (4) | 0.7113 (2) | 0.46701 (13) | 0.0210 (4) | |
C3 | 0.6726 (4) | 0.8148 (2) | 0.45164 (13) | 0.0221 (5) | |
H3 | 0.7380 | 0.9016 | 0.4951 | 0.026* | |
C4 | 0.7972 (4) | 0.7912 (2) | 0.37307 (13) | 0.0204 (4) | |
H4 | 0.9482 | 0.8620 | 0.3629 | 0.024* | |
C5 | 0.7035 (4) | 0.6648 (2) | 0.30888 (12) | 0.0166 (4) | |
C6 | 0.4793 (4) | 0.5600 (2) | 0.32443 (12) | 0.0176 (4) | |
C7 | 0.3561 (4) | 0.5847 (2) | 0.40255 (13) | 0.0208 (5) | |
H7 | 0.2040 | 0.5146 | 0.4128 | 0.025* | |
C8 | 0.1709 (4) | 0.3323 (2) | 0.26827 (14) | 0.0217 (5) | |
H8A | 0.2110 | 0.2765 | 0.3179 | 0.033* | |
H8B | 0.1328 | 0.2551 | 0.2150 | 0.033* | |
H8C | 0.0103 | 0.3917 | 0.2793 | 0.033* | |
O4 | 0.8254 (3) | 0.71964 (19) | −0.04761 (9) | 0.0299 (4) | |
N1 | 0.3766 (4) | 0.6341 (2) | −0.07875 (11) | 0.0205 (4) | |
H1A | 0.207 (3) | 0.645 (3) | −0.0672 (14) | 0.025* | |
H1B | 0.415 (4) | 0.586 (2) | −0.1293 (11) | 0.025* | |
N2 | 0.2385 (3) | 0.80224 (19) | 0.18395 (10) | 0.0170 (4) | |
C9 | 0.5840 (4) | 0.7129 (2) | −0.02755 (13) | 0.0197 (4) | |
C10 | 0.5123 (4) | 0.7959 (2) | 0.05932 (12) | 0.0169 (4) | |
C11 | 0.6653 (4) | 0.9350 (2) | 0.09779 (13) | 0.0201 (4) | |
H11 | 0.8121 | 0.9801 | 0.0687 | 0.024* | |
C12 | 0.5998 (4) | 1.0066 (2) | 0.17913 (13) | 0.0220 (5) | |
H12 | 0.6997 | 1.1023 | 0.2066 | 0.026* | |
C13 | 0.3864 (4) | 0.9363 (2) | 0.21971 (13) | 0.0192 (4) | |
H13 | 0.3429 | 0.9856 | 0.2757 | 0.023* | |
C14 | 0.3015 (4) | 0.7346 (2) | 0.10499 (12) | 0.0162 (4) | |
H14 | 0.1966 | 0.6397 | 0.0788 | 0.019* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0440 (10) | 0.0363 (9) | 0.0266 (9) | 0.0056 (8) | 0.0038 (7) | 0.0006 (7) |
O2 | 0.0182 (8) | 0.0217 (7) | 0.0174 (7) | −0.0031 (6) | 0.0053 (6) | 0.0004 (6) |
O3 | 0.0223 (8) | 0.0214 (7) | 0.0198 (7) | −0.0045 (6) | 0.0064 (6) | −0.0016 (6) |
C1 | 0.0356 (13) | 0.0308 (12) | 0.0189 (10) | 0.0104 (10) | −0.0028 (9) | −0.0012 (9) |
C2 | 0.0226 (11) | 0.0246 (11) | 0.0170 (10) | 0.0074 (8) | 0.0004 (8) | 0.0045 (8) |
C3 | 0.0270 (11) | 0.0214 (10) | 0.0165 (10) | 0.0060 (9) | −0.0036 (8) | −0.0020 (8) |
C4 | 0.0187 (10) | 0.0193 (10) | 0.0218 (11) | −0.0018 (8) | −0.0001 (8) | 0.0014 (8) |
C5 | 0.0157 (10) | 0.0209 (10) | 0.0145 (9) | 0.0054 (8) | 0.0026 (8) | 0.0043 (8) |
C6 | 0.0193 (10) | 0.0176 (10) | 0.0157 (10) | 0.0033 (8) | 0.0002 (8) | 0.0007 (8) |
C7 | 0.0193 (11) | 0.0242 (11) | 0.0199 (10) | 0.0020 (8) | 0.0046 (8) | 0.0055 (8) |
C8 | 0.0185 (11) | 0.0198 (10) | 0.0259 (11) | −0.0031 (8) | 0.0035 (8) | 0.0021 (8) |
O4 | 0.0144 (8) | 0.0516 (10) | 0.0228 (8) | 0.0064 (7) | 0.0038 (6) | −0.0003 (7) |
N1 | 0.0172 (9) | 0.0279 (9) | 0.0153 (9) | 0.0046 (7) | 0.0035 (7) | −0.0030 (7) |
N2 | 0.0171 (9) | 0.0194 (8) | 0.0148 (8) | 0.0031 (7) | 0.0012 (6) | 0.0027 (6) |
C9 | 0.0178 (11) | 0.0255 (11) | 0.0168 (10) | 0.0055 (8) | 0.0018 (8) | 0.0042 (8) |
C10 | 0.0144 (10) | 0.0210 (10) | 0.0156 (10) | 0.0038 (8) | −0.0008 (7) | 0.0030 (8) |
C11 | 0.0149 (10) | 0.0240 (10) | 0.0221 (10) | 0.0003 (8) | 0.0020 (8) | 0.0058 (8) |
C12 | 0.0227 (11) | 0.0180 (10) | 0.0234 (11) | −0.0030 (8) | −0.0011 (8) | −0.0002 (8) |
C13 | 0.0217 (11) | 0.0192 (10) | 0.0160 (10) | 0.0031 (8) | 0.0002 (8) | 0.0001 (8) |
C14 | 0.0157 (10) | 0.0162 (9) | 0.0161 (10) | 0.0009 (7) | −0.0013 (8) | 0.0012 (7) |
O1—C1 | 1.197 (3) | C8—H8B | 0.9800 |
O2—C5 | 1.343 (2) | C8—H8C | 0.9800 |
O2—H2 | 0.854 (16) | O4—C9 | 1.236 (2) |
O3—C6 | 1.365 (2) | N1—C9 | 1.330 (3) |
O3—C8 | 1.435 (2) | N1—H1A | 0.868 (16) |
C1—C2 | 1.474 (3) | N1—H1B | 0.869 (16) |
C1—H1 | 0.9500 | N2—C13 | 1.336 (2) |
C2—C3 | 1.391 (3) | N2—C14 | 1.338 (2) |
C2—C7 | 1.396 (3) | C9—C10 | 1.500 (3) |
C3—C4 | 1.384 (3) | C10—C14 | 1.388 (3) |
C3—H3 | 0.9500 | C10—C11 | 1.392 (3) |
C4—C5 | 1.391 (3) | C11—C12 | 1.384 (3) |
C4—H4 | 0.9500 | C11—H11 | 0.9500 |
C5—C6 | 1.410 (3) | C12—C13 | 1.384 (3) |
C6—C7 | 1.375 (3) | C12—H12 | 0.9500 |
C7—H7 | 0.9500 | C13—H13 | 0.9500 |
C8—H8A | 0.9800 | C14—H14 | 0.9500 |
C5—O2—H2 | 112.6 (16) | O3—C8—H8C | 109.5 |
C6—O3—C8 | 117.44 (15) | H8A—C8—H8C | 109.5 |
O1—C1—C2 | 126.2 (2) | H8B—C8—H8C | 109.5 |
O1—C1—H1 | 116.9 | C9—N1—H1A | 121.6 (15) |
C2—C1—H1 | 116.9 | C9—N1—H1B | 117.5 (15) |
C3—C2—C7 | 119.56 (18) | H1A—N1—H1B | 120 (2) |
C3—C2—C1 | 122.83 (19) | C13—N2—C14 | 117.72 (17) |
C7—C2—C1 | 117.59 (19) | O4—C9—N1 | 123.82 (19) |
C4—C3—C2 | 119.93 (19) | O4—C9—C10 | 119.84 (18) |
C4—C3—H3 | 120.0 | N1—C9—C10 | 116.34 (17) |
C2—C3—H3 | 120.0 | C14—C10—C11 | 118.15 (18) |
C3—C4—C5 | 120.68 (18) | C14—C10—C9 | 121.73 (18) |
C3—C4—H4 | 119.7 | C11—C10—C9 | 120.07 (18) |
C5—C4—H4 | 119.7 | C12—C11—C10 | 118.88 (18) |
O2—C5—C4 | 124.72 (18) | C12—C11—H11 | 120.6 |
O2—C5—C6 | 115.90 (17) | C10—C11—H11 | 120.6 |
C4—C5—C6 | 119.38 (18) | C13—C12—C11 | 118.77 (19) |
O3—C6—C7 | 125.62 (18) | C13—C12—H12 | 120.6 |
O3—C6—C5 | 114.82 (17) | C11—C12—H12 | 120.6 |
C7—C6—C5 | 119.56 (18) | N2—C13—C12 | 123.12 (18) |
C6—C7—C2 | 120.88 (19) | N2—C13—H13 | 118.4 |
C6—C7—H7 | 119.6 | C12—C13—H13 | 118.4 |
C2—C7—H7 | 119.6 | N2—C14—C10 | 123.34 (18) |
O3—C8—H8A | 109.5 | N2—C14—H14 | 118.3 |
O3—C8—H8B | 109.5 | C10—C14—H14 | 118.3 |
H8A—C8—H8B | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4i | 0.87 (2) | 2.05 (2) | 2.900 (2) | 167 (2) |
N1—H1B···O2ii | 0.87 (2) | 2.42 (2) | 3.085 (2) | 134 (2) |
N1—H1B···O3ii | 0.87 (2) | 2.20 (2) | 3.019 (2) | 156 (2) |
O2—H2···N2iii | 0.85 (2) | 1.80 (2) | 2.634 (2) | 164 (2) |
C8—H8A···O1iv | 0.98 | 2.59 | 3.381 (3) | 137 |
C8—H8C···O2i | 0.98 | 2.55 | 3.337 (2) | 138 |
C13—H13···O1v | 0.95 | 2.49 | 3.185 (3) | 130 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C6H6N2O·C8H8O3 |
Mr | 274.27 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 4.8979 (1), 8.5440 (2), 15.4713 (4) |
α, β, γ (°) | 98.108 (1), 92.810 (2), 94.784 (2) |
V (Å3) | 637.52 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.22 × 0.14 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.977, 0.996 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3432, 2243, 1862 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.112, 1.05 |
No. of reflections | 2243 |
No. of parameters | 191 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.66, −0.28 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4i | 0.868 (16) | 2.048 (17) | 2.900 (2) | 167 (2) |
N1—H1B···O2ii | 0.869 (16) | 2.416 (19) | 3.085 (2) | 134.2 (18) |
N1—H1B···O3ii | 0.869 (16) | 2.203 (18) | 3.019 (2) | 156 (2) |
O2—H2···N2iii | 0.854 (16) | 1.801 (17) | 2.634 (2) | 164 (2) |
C8—H8A···O1iv | 0.98 | 2.59 | 3.381 (3) | 137.4 |
C8—H8C···O2i | 0.98 | 2.55 | 3.337 (2) | 137.7 |
C13—H13···O1v | 0.95 | 2.49 | 3.185 (3) | 129.9 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y+2, −z+1. |
Acknowledgements
IIUM is acknowledged for funding this study (Endowment fund A No. EDWA10–150–0697).
References
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The crystal structures of nicotinamide (Miwa et al.,1999; Li et al., 2011) and 4-hydroxy-3-methoxybenzaldehyde, vanillin, (Velavan et al.,1995) have been previously reported. The title compound is an equimolar cocrystal of nicotinamide and vanillin (Fig. 1). The nicotinamide aromatic ring and the plane of the amide fragment, N1—C9—O4, are twisted with respect to each other, making a dihedral angle of 32.6 (2)°. The vanillin molecule is essentially planar, the highest deviation from the best plane passing through all non-H atoms being 0.0156 (13) Å for O3 atom. In the crystal, the molecules of nicotinamide and vanillin are linked through N—H···O and O—H···N hydrogen bonds into infinite chains along the a axis (Fig. 2). The chains are connected via C—H···O interactions (Table 1 and Fig. 2) to form a three-dimensional polymeric structure.